SMED30007150
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007150 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of SMED30007150 vs. Ensembl Human
Match: RTL1 (retrotransposon Gag like 1 [Source:HGNC Symbol;Acc:HGNC:14665]) HSP 1 Score: 68.1662 bits (165), Expect = 2.246e-10 Identity = 48/193 (24.87%), Postives = 92/193 (47.67%), Query Frame = -3 Query: 3881 EKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKED-GTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNT 4456 +K F++ + F+G V+ K ++ NK ++ I P S LR+F+ YR F++ +S+I+ PL + + W E ++ F LK+ +AP+L + F ++T + A+ A L QI + G A+ SRN+ E+ Y ++L + ++ R+++ T+ + +NT Sbjct: 766 DKSQFHRQTVEFLGFVVTPKGVKLNKNVMTIITGYPTPGSKLSLRNFIEFVFPYRHFVERFSIIAEPLVRQLLSSYQ-FYWGVEEQEAFECLKRAFRKAPLLHHPKPQNPFYLETGVTGTALHASLIQIDDQTGKRACCAFYSRNISPIEVEYSQAEMKILPIRA------AFMVWCRYLENTEEPIMILLNT 951
BLAST of SMED30007150 vs. Ensembl Human
Match: RTL1 (retrotransposon Gag like 1 [Source:HGNC Symbol;Acc:HGNC:14665]) HSP 1 Score: 68.1662 bits (165), Expect = 2.246e-10 Identity = 48/193 (24.87%), Postives = 92/193 (47.67%), Query Frame = -3 Query: 3881 EKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKED-GTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNT 4456 +K F++ + F+G V+ K ++ NK ++ I P S LR+F+ YR F++ +S+I+ PL + + W E ++ F LK+ +AP+L + F ++T + A+ A L QI + G A+ SRN+ E+ Y ++L + ++ R+++ T+ + +NT Sbjct: 766 DKSQFHRQTVEFLGFVVTPKGVKLNKNVMTIITGYPTPGSKLSLRNFIEFVFPYRHFVERFSIIAEPLVRQLLSSYQ-FYWGVEEQEAFECLKRAFRKAPLLHHPKPQNPFYLETGVTGTALHASLIQIDDQTGKRACCAFYSRNISPIEVEYSQAEMKILPIRA------AFMVWCRYLENTEEPIMILLNT 951
BLAST of SMED30007150 vs. Ensembl Zebrafish
Match: FO704673.1 (pep chromosome:GRCz11:12:14545475:14551077:-1 gene:ENSDARG00000112601.1 transcript:ENSDART00000188717.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FO704673.1) HSP 1 Score: 133.265 bits (334), Expect = 3.159e-50 Identity = 78/222 (35.14%), Postives = 120/222 (54.05%), Query Frame = -3 Query: 3845 SIHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKED-GTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL--YRRRFVDRTDHKALKFMNTTKKPISPQLQTW 4501 ++ T L+ + L EKC F+ S +F+G+ +S ++ N K+ + PK+ EL+ FLG N+YRRFI+NYS+ISAPL + G + W E K F LK APILK+ + F+++ DAS +GA+LSQ + G AY SR L E Y V KELL++ + +R +L F TDHK L+++ + ++ ++P+ W Sbjct: 675 TVLTRLQENQLYAKLEKCEFHMSKTSFLGYIISHHGVEMNNTKVQAVTGWPLPKTVKELQRFLGFANFYRRFIRNYSLISAPLTSLLKGKPSKLKWNPETVKSFEKLKTSFTTAPILKHPNPELPFVVEVDASDYGIGAVLSQRHGNPGKLHPCAYFSRKLTAAERNYDVGNKELLSMKAALEEWRHWLEGAVHPFQIITDHKNLEYIKSARR-LNPRQARW 895 HSP 2 Score: 88.1965 bits (217), Expect = 3.159e-50 Identity = 52/164 (31.71%), Postives = 93/164 (56.71%), Query Frame = -1 Query: 4480 VEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 4971 +E ++ L +G + SP + K DG +R C+D+R LN++T K+ +P+P + L+ L +++I++ +DL AY + + E + K AF T G + + +GL+ +PA F ++++ + ++ K V+ Y+DDILIY+ N E H K + V T E Sbjct: 519 METYIEEALSSGYIRPSTSPAAAGFFFIEKKDGGLRPCIDYRGLNNITVKYRYPLPLVPPALEQLREARIYTKLDLRSAYNLIRIREGDEWKTAFLTTRGHYEYLVMPYGLANSPAVFQSFINEVFRDLLNKCVIAYIDDILIYSPNLEQHIKDVRTVLTRLQE 682
BLAST of SMED30007150 vs. Ensembl Zebrafish
Match: BX511082.1 (pep chromosome:GRCz11:9:14291932:14297132:1 gene:ENSDARG00000113678.1 transcript:ENSDART00000183119.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511082.1) HSP 1 Score: 124.79 bits (312), Expect = 8.884e-49 Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = -3 Query: 3872 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQ-IKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRR--RFVDRTDHKALKFMNTTKK 4486 L +GL V EKC F+ + F+GH VS + ++ + K+ + + P S L+ FLG N+YRRFI+N+S ++APL A T+ W+ + F LK APIL QF+++ DAS +GAILSQ DG AY S L E Y + +ELLA+ + +R +L F+ TDHK L+++ + K+ Sbjct: 701 LLENGLYVKAEKCVFHAQSVPFLGHIVSVEGMRMDPEKVQAVVDWPTPDSRKALQRFLGFANFYRRFIRNFSQLAAPLTALTSLKTPF-RWSNAAQVAFDRLKSCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQRSSSDGKMHPCAYFSHRLNNAEQNYDIGNRELLAVKLALEEWRHWLEGSGVPFIVWTDHKNLEYIQSAKR 907 HSP 2 Score: 92.0485 bits (227), Expect = 8.884e-49 Identity = 61/178 (34.27%), Postives = 98/178 (55.06%), Query Frame = -1 Query: 4480 LQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5013 L P R+ M E+ + + L A ++ SP V K DGS+R C+D+R LN++T K ++P+P M + L + F+ +DL AY+ V + E + K AF+T G F + FGLS APA F L++ +L+ ++ + + VYLDDILI++ + + H + + V LE Sbjct: 532 LSVPEREAM------EKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNAITVKNTYPLPLMSSAFERLQGASFFTKLDLRNAYHLVRIREGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMLDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLE 703
BLAST of SMED30007150 vs. Ensembl Zebrafish
Match: BX546500.1 (pep chromosome:GRCz11:23:12926092:12931693:-1 gene:ENSDARG00000086495.3 transcript:ENSDART00000122176.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX546500.1) HSP 1 Score: 124.405 bits (311), Expect = 3.102e-48 Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = -3 Query: 3872 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIV-WTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQ-IKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRR--RFVDRTDHKALKFMNTTKK 4486 L +GL V EKC F+ + F+GH VS + ++ + KI + + P S L+ FLG N+YRRFI+N+S ++APL + T+ KM W+ F LK APIL QF+++ DAS +GAILSQ DG AY S L E Y + +ELLA+ + +R +L F+ TDHK L+++ + K+ Sbjct: 675 LLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAVVDWPTPDSRKALQRFLGFANFYRRFIRNFSQLAAPLTSLTS--SKMPFRWSSAAEAAFSKLKGCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQRSSSDGKIHPCAYFSHRLSPAERNYDIGNRELLAVKLALEEWRHWLEGSGVPFIVWTDHKNLEYIRSAKR 881 HSP 2 Score: 90.1225 bits (222), Expect = 3.102e-48 Identity = 62/178 (34.83%), Postives = 97/178 (54.49%), Query Frame = -1 Query: 4480 LQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5013 L P R+ M E+ + + L A ++ SP V K DGS+R C+D+R LNS+T K ++P+P M + L + F+ +DL AY+ V + + K AF+T G F + FGLS APA F L++ +L+ +I + + VYLDDILI++ + + H + + V LE Sbjct: 506 LSVPEREAM------EKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLE 677
BLAST of SMED30007150 vs. Ensembl Zebrafish
Match: BX890543.1 (pep chromosome:GRCz11:14:42224893:42231293:-1 gene:ENSDARG00000114583.1 transcript:ENSDART00000185486.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX890543.1) HSP 1 Score: 122.865 bits (307), Expect = 3.178e-48 Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = -3 Query: 3845 LKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIK-EDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL--YRRRFVDRTDHKALKFMNTTKKPISPQLQTW 4471 L V EKC F+ + F+G +S EIQ + KI + P S L+ FLG N+YRRFI+N+ I+APL A T+ W + ++ F LK AP+L + QFI++ DAS +GA+LSQ DG A+ S L E Y V +ELLA+ + +R +L + F+ TDHK L+++ + ++ ++P+ W Sbjct: 695 LYVKAEKCVFHAQSIPFLGFIISAGEIQADPCKIRAVAEWPTPDSRKALQRFLGFANFYRRFIRNFGQIAAPLTALTSPK-VWFKWNSDAQEAFDELKSRFVSAPVLSIPDPEQQFIVEVDASDVGVGAVLSQRSCLDGKVHPCAFFSHRLNPSERNYDVGNRELLAVRLALGEWRHWLEGAAQPFLVWTDHKNLEYIRSARR-LTPRQARW 904 HSP 2 Score: 91.6633 bits (226), Expect = 3.178e-48 Identity = 61/178 (34.27%), Postives = 97/178 (54.49%), Query Frame = -1 Query: 4480 LQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5013 L P R+ M + + L+ G++ SP V K DGS+R C+D+R LN +T K +P+P M + L +K+F+ +DL AY+ V + E + K AF+T G F + FGL+ APA F L++ +L+ ++ + V VYLDDILI++ + H + + +V LE Sbjct: 521 LSGPEREAM------DRYINESLKTGLIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNDITVKNRYPLPLMSSAFELLQGAKVFTKLDLRNAYHLVRIREGDEWKTAFNTPTGHFEYRVLPFGLTNAPAVFQALVNDVLRDMVNRFVFVYLDDILIFSPCLQIHIQHVRQVLQRLLE 692
BLAST of SMED30007150 vs. Ensembl Zebrafish
Match: BX511224.1 (pep chromosome:GRCz11:2:18017000:18022765:1 gene:ENSDARG00000113243.1 transcript:ENSDART00000186877.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511224.1) HSP 1 Score: 125.561 bits (314), Expect = 3.179e-48 Identity = 74/208 (35.58%), Postives = 107/208 (51.44%), Query Frame = -3 Query: 3872 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQ-IKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRR--RFVDRTDHKALKFMNTTKK 4486 L +GL V EKC F+ + F+GH VS + ++ + KI + N P S L+ FLG N+YRRFI N+S ++APL + T+ W+ F LK APIL QF+++ DAS +GAILSQ DG AY S L E Y + +ELLA+ + +R +L F+ TDHK L+++ + K+ Sbjct: 701 LLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAVVNWPTPDSRKALQRFLGFANFYRRFIHNFSQLAAPLTSLTSSKTPF-RWSSAAEAAFSKLKGCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQRSASDGKVHPCAYFSHRLSSAERNYDIGNRELLAVKLALEEWRHWLEGSGVPFIVWTDHKNLEYIKSAKR 907 HSP 2 Score: 89.3521 bits (220), Expect = 3.179e-48 Identity = 62/178 (34.83%), Postives = 97/178 (54.49%), Query Frame = -1 Query: 4480 LQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5013 L P R+ M E+ + + L A ++ SP V K DGS+R C+D+R LNS+T K ++P+P M + L + F+ +DL AY+ V + + K AF+T G F + FGLS APA F L++ +L+ +I + + VYLDDILI++ + + H + + V LE Sbjct: 532 LSVPEREAM------EKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVCIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSHSLQEHIQHVRRVLQRLLE 703
BLAST of SMED30007150 vs. Ensembl Xenopus
Match: anxa6 (annexin A6 [Source:Xenbase;Acc:XB-GENE-989741]) HSP 1 Score: 140.584 bits (353), Expect = 2.012e-62 Identity = 74/237 (31.22%), Postives = 122/237 (51.48%), Query Frame = -3 Query: 3791 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATT-GNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLSNTILRYNI*IEKY 4498 + ++++GL + PEKC + + ++GH V +++ + K+ I PK+ ++ +FLG YYR+FI NYS ++ PL T+ + IVWT EC LK+ L +P+L +FI+ TDAS +GA+LSQ+ G E +AY SR L E Y KE LA+ + + YLY R F TDH L ++ ++ + +LR+++ +++Y Sbjct: 509 VFAQIQDAGLTLKPEKCHLAMAEVQYLGHRVGGGQLRPDPAKVEAICQWPIPKTQKQVLAFLGTSGYYRKFIPNYSTVAKPLTDLTSRQRSRTIVWTPECESAMNALKQALASSPVLAAPDFSRRFILQTDASNFGLGAVLSQVNTYGEEHPVAYLSRKLLPREAAYATIEKECLAIVWALQKLQPYLYGREFTVVTDHNPLSWLQR------------VSGDNGKLLRWSLLLQQY 733 HSP 2 Score: 122.094 bits (305), Expect = 2.012e-62 Identity = 72/243 (29.63%), Postives = 125/243 (51.44%), Query Frame = -1 Query: 4600 LELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMH-----LEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQ 5313 + +N++ I D + + S + G + N+ + R D+ + L L + +L ++ +S +F A + G T H++ T Q P R P + + +++ + +L GV++ SPW +P+V+V K DGS R C+D+R LN VT ++PMP + LLD LG +K +++DL + Y+Q+ L ++Q K AF T G + F FG+ APATF +L+++ Sbjct: 244 VHINMMKPYHIREDIVSAICSAPVEGTDDPPIPNLIEEATSARGIDAVTISDH---LHLSQQDQLRKILRSYSPMFSA---NPGRTHWAEHKVDTG----TQLPIRSPAYRVAEAVRPEMKSQIDEMLAFGVITPSHSPWASPVVLVPKKDGSTRFCVDYRRLNDVTTTDAYPMPRVDELLDRLGNAKYLTTLDLSRGYWQIPLAPSAQEKSAFLTPFGLYQFTVMPFGMRNAPATFQRLVNR 476
BLAST of SMED30007150 vs. Ensembl Xenopus
Match: ENSXETT00000006041.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:37317867:37322724:1 gene:ENSXETG00000003070.1 transcript:ENSXETT00000006041.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 137.887 bits (346), Expect = 9.116e-59 Identity = 85/244 (34.84%), Postives = 126/244 (51.64%), Query Frame = -3 Query: 3827 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPL------YAATTGNDKMIV-----------------WTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLSN 4486 L GLK++PEKC F + +N++GH VS + I T+ KI + + +P++ TELRSFLG YYRRF+K +S ++ PL G+D+ I+ WTEEC K F LK L AP+L Y+ A + + DAS +G IL Q + + +A+ SR+L E Y + E LAL +V +YLY F +TD+ L ++ TT K + W+A L++ Sbjct: 503 LEKEGLKLSPEKCQFCQPSVNYVGHVVSAEGIATDPSKIEAVSSWPKPRTITELRSFLGFCGYYRRFVKGFSKVAQPLNQLLQSNTEVEGSDRDILAKRLRGQGWTRESIEDFWTEECDKAFDQLKYCLTHAPVLAYADATKPYTLHIDASREGLGGILYQ-EYNKELRPVAFISRSLSPSERNYPAHKLEFLALKWAVVDKLHEYLYGAEFEVQTDNNPLTYILTTAK-LDATGHRWLAALAH 744 HSP 2 Score: 112.464 bits (280), Expect = 9.116e-59 Identity = 75/213 (35.21%), Postives = 122/213 (57.28%), Query Frame = -1 Query: 4495 SKLGTLIYQFSNIFMASRFDLGHTKVITHEIK-TSDPPILQNPRR-QPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5127 S+L + + S +F + D+G + H+I+ D P + RR P LE + + ++ L AG++ + +SP+ +P+V+V K +GSIRMC+D+R LN T + P ++ L+ L SK FS +DL YYQ+ ++ + K AF G F FNR GL APATF +LM + + + + V+VYLDD++++ E H++ L +VF Sbjct: 289 SRLRKHLNEHSALFSRNDLDMGCSTSTKHKIRLREDKPFRERSRRIAPGDLE-DLRKHLEELKAAGIIKESRSPYASPIVVVRKKNGSIRMCVDYRTLNQRTIPDQYTTPRIEDALNCLVGSKWFSVLDLRSGYYQLPMHPEDKEKTAFICPLGFFEFNRMPQGLCGAPATFQRLMERTVGDMHLLEVLVYLDDLIVFGRTLEEHEQRLLKVF 500
BLAST of SMED30007150 vs. Ensembl Xenopus
Match: ENSXETT00000035398.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:9869556:9871940:-1 gene:ENSXETG00000011182.1 transcript:ENSXETT00000035398.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 106.301 bits (264), Expect = 5.520e-43 Identity = 65/210 (30.95%), Postives = 102/210 (48.57%), Query Frame = -3 Query: 3872 THLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQ-IKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL--YRRRFVDRTDHKALKFMNTTKK 4492 + LR + L EKC F ++F+G+ +S + + + K+S I+ P+ST ++ F+G NYYR+FIK +S AP+ + + W + F +LK A +L++ F I+ DAS GAILSQ DG AY S+ E Y + +ELLA+ + +R L TDHK L+F+ + K+ Sbjct: 177 SRLRENSLFAKLEKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKWPLPQSTKAIQRFIGFANYYRQFIKGFSSRIAPILSLIRKGGRPNCWPPVALEAFQSLKDAFISASVLRHPEPHLPFFIEVDASDVGAGAILSQRHSADGKLHPCAYFSKKFSSAEQNYDIGNRELLAVKLALEEWRHLLEGASHPVTIYTDHKNLEFLQSLKR 386 HSP 2 Score: 91.6633 bits (226), Expect = 5.520e-43 Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 4480 AKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 4977 A ++E + L+ G + SP V K DG +R C+D+R LN +T K +P+P + L D L +KIFS +DL AY + + E + K AF+T++G + + FGL APA F + ++ I + ++ K VVVYLDDILI++ + ETH + E + E Sbjct: 16 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAPAVFQEFVNDIFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRE 181
BLAST of SMED30007150 vs. Ensembl Xenopus
Match: ENSXETT00000034712.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:9:33567219:33572531:-1 gene:ENSXETG00000011772.1 transcript:ENSXETT00000034712.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 105.145 bits (261), Expect = 1.338e-42 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = -3 Query: 3872 THLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQI-KEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL--YRRRFVDRTDHKALKFMNTTKK 4492 + LR + L EKC F ++F+G+ +S + + + K+S I+ P+ST ++ F+G NYYR+FIK++S AP+ + + W + F +LK A +L++ F I+ DAS GAILSQ DG AY S+ E Y + +ELLA+ + +R L TDHK L+F+ + K+ Sbjct: 695 SRLRENFLFAKLEKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKWPLPQSTKAIQRFIGFANYYRQFIKDFSSRIAPILSLIRKGGRPNCWPPVALEAFQSLKDAFISASVLRHPEPHLPFFIEVDASDVGAGAILSQRHSADGKLHPCAYFSKKFSSAEQNYDIGNRELLAVKLALEEWRHLLEGASHPVTIYTDHKNLEFLQSLKR 904 HSP 2 Score: 91.2781 bits (225), Expect = 1.338e-42 Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 4480 AKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 4977 A ++E + L+ G + SP V K DG +R C+D+R LN +T K +P+P + L D L +KIFS +DL AY + + E + K AF+T++G + + FGL APA F + ++ I + ++ K VVVYLDDILI++ + ETH + E + E Sbjct: 534 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAPAVFQEFVNDIFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRE 699
BLAST of SMED30007150 vs. Ensembl Xenopus
Match: ENSXETT00000042189.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460667.1:82848:87648:1 gene:ENSXETG00000017765.1 transcript:ENSXETT00000042189.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 105.531 bits (262), Expect = 1.466e-42 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = -3 Query: 3872 THLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQ-IKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL--YRRRFVDRTDHKALKFMNTTKK 4492 + LR + L EKC F ++F+G+ +S + + + K+S I+ P+ST ++ F+G NYYR+FIK++S AP+ + + W + F +LK A +L++ F I+ DAS GAILSQ DG AY S+ E Y + +ELLA+ + +R L TDHK L+F+ + K+ Sbjct: 695 SRLRENFLFAKLEKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKWPLPQSTKAIQRFIGFANYYRQFIKDFSSHIAPILSLIRKGGRPNCWPPVALEAFQSLKDAFISASVLRHPEPHLPFFIEVDASDVGAGAILSQRHSADGKLHPCAYFSKKFSSAEQNYDIGNRELLAVKLALEEWRHLLEGASHPVTIYTDHKNLEFLQSLKR 904 HSP 2 Score: 91.2781 bits (225), Expect = 1.466e-42 Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 4480 AKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 4977 A ++E + L+ G + SP V K DG +R C+D+R LN +T K +P+P + L D L +KIFS +DL AY + + E + K AF+T++G + + FGL APA F + ++ I + ++ K VVVYLDDILI++ + ETH + E + E Sbjct: 534 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAPAVFQEFVNDIFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRE 699
BLAST of SMED30007150 vs. Ensembl Mouse
Match: Rtl1 (retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]) HSP 1 Score: 63.929 bits (154), Expect = 3.319e-9 Identity = 47/193 (24.35%), Postives = 91/193 (47.15%), Query Frame = -3 Query: 3881 EKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQI-KEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNT 4456 +K F++ +G +S K ++ NK ++ I P S L+S + L YR F++N+++I+APL ++ W EE ++ +LK+ ++P+L + F ++TD + + A L Q E G + A+ SR L E+ Y +L + ++ R+++ T+ + +NT Sbjct: 1027 DKTQFHRQTAEILGFNISPKGVKLNKNLMNLIVGCPVPGSRRCLQSVIDLVYPYRHFVENFAVIAAPLVRQLLSSEP-YYWGEEEQEALESLKRAFRKSPVLYHPKPQNPFYLETDITGSFLSASLVQTDDETGKKSTCAFYSRPLSTMEVEYPRVEMRILPIR------AAFMVWCRYLENTEEPIMILLNT 1212
BLAST of SMED30007150 vs. Ensembl Mouse
Match: Rtl1 (retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]) HSP 1 Score: 63.929 bits (154), Expect = 3.319e-9 Identity = 47/193 (24.35%), Postives = 91/193 (47.15%), Query Frame = -3 Query: 3881 EKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQI-KEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNT 4456 +K F++ +G +S K ++ NK ++ I P S L+S + L YR F++N+++I+APL ++ W EE ++ +LK+ ++P+L + F ++TD + + A L Q E G + A+ SR L E+ Y +L + ++ R+++ T+ + +NT Sbjct: 1027 DKTQFHRQTAEILGFNISPKGVKLNKNLMNLIVGCPVPGSRRCLQSVIDLVYPYRHFVENFAVIAAPLVRQLLSSEP-YYWGEEEQEALESLKRAFRKSPVLYHPKPQNPFYLETDITGSFLSASLVQTDDETGKKSTCAFYSRPLSTMEVEYPRVEMRILPIR------AAFMVWCRYLENTEEPIMILLNT 1212
BLAST of SMED30007150 vs. UniProt/SwissProt
Match: sp|P20825|POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.299e-58 Identity = 80/223 (35.87%), Postives = 122/223 (54.71%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + T L ++ LK+ +KC F K NF+GH V+ I+ N K+ I + P E+R+FLGL YYR+FI NY+ I+ P+ + K+ E + F LK L+ PIL+ + +F++ TDAS A+GA+LSQ I++ SR L HE+ Y KELLA+ FR YL R+F+ +DH+ L++++ K+P +L+ W LS Sbjct: 384 VFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQ-----NGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEP-GAKLERWRVRLS 600 HSP 2 Score: 114.775 bits (286), Expect = 9.299e-58 Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = -1 Query: 4603 KLGTLIYQFSNIFMASRFDLGHTKVITHEIKTS-DPPIL--QNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTP-LVIVGKPDGS----IRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMH 5124 KL L+ +F N+ L T I H + T+ + PI Q P Q +E VE VQ +L G++ + SP+N+P V+ KPD S R+ +D+R LN +T +P+P M +L LGK + F++IDL + ++Q+E++E S K AFSTK G + + R FGL APATF + M+ Sbjct: 170 KLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIE--VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMN 349
BLAST of SMED30007150 vs. UniProt/SwissProt
Match: sp|P04323|POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.404e-54 Identity = 82/219 (37.44%), Postives = 114/219 (52.05%), Query Frame = -3 Query: 3830 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4486 L + LK+ +KC F K F+GH ++ I+ N KI I+ P E+++FLGL YYR+FI N++ I+ P+ N K+ E F LK L+ E PILK +F + TDAS A+GA+LSQ DG ++Y SR L +HE+ Y KELLA+ FR YL R F +DH+ L ++ K P S +L W LS Sbjct: 389 LAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQ---DG--HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNS-KLTRWRVKLS 601 HSP 2 Score: 107.071 bits (266), Expect = 5.404e-54 Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = -1 Query: 4603 DKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIV-GKPDGS----IRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMH 5136 ++ +L L+ ++ +I L T H I T L + P E +VE +Q++L G++ SP+N+P+ +V K D S R+ +D+R LN +T P+P M +L LG+ F++IDL + ++Q+E++ S K AFSTK G + + R FGL APATF + M+ Sbjct: 168 EEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMN 350
BLAST of SMED30007150 vs. UniProt/SwissProt
Match: sp|P10394|POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.002e-53 Identity = 78/207 (37.68%), Postives = 114/207 (55.07%), Query Frame = -3 Query: 3863 RNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPIS 4483 R LK++PEKC+F + F+GH ++K I + +K I+N P R F+ NYYRRFIKN++ S + N WT+EC+K FI+LK L +L+Y +F I TDAS +A GA+L+Q +G + +AY SR K E T +EL A+H I+HFR Y+Y + F +TDH+ L ++ + P S Sbjct: 498 REYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPF-EWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQ-NHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSS 702 HSP 2 Score: 92.0485 bits (227), Expect = 1.002e-53 Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = -1 Query: 4606 DPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGK---PDGS---IRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLM 5025 D P+ R P +++ VQ L++ +V S +N+PL++V K P+ R+ +D+R +N FP+P + +LD LG++K FS +DL ++Q+EL+E S+ +FST G + F R FGL AP +F ++M Sbjct: 312 DEPVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 457 HSP 3 Score: 23.483 bits (49), Expect = 1.002e-53 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = -2 Query: 3759 QYNFALQYINREVHGNADDMSRLT 3830 +YNF ++Y+ + + AD +SR+T Sbjct: 713 EYNFTVEYLKGKDNHVADALSRIT 736
BLAST of SMED30007150 vs. UniProt/SwissProt
Match: sp|Q8I7P9|POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.413e-50 Identity = 73/210 (34.76%), Postives = 111/210 (52.86%), Query Frame = -3 Query: 3890 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTG----------NDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVD-RTDHKALKF 4486 L + L+VN EK F + + F+G+ V+ I+ + +K+ I P S EL+ FLG+ +YYR+FI++Y+ ++ PL T G + I E + F +LK +LC + IL + F + TDAS A+GA+LSQ + G + IAY SR+L K E Y KE+LA+ + + R YLY + TDH+ L F Sbjct: 305 LSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQ-DDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTF 513 HSP 2 Score: 109.383 bits (272), Expect = 1.413e-50 Identity = 72/211 (34.12%), Postives = 120/211 (56.87%), Query Frame = -1 Query: 4507 LGTLIYQFSNIFMASRFDLGHTKVITHEIKT-SDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGK---PDGS--IRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFL 5121 L +L+ +F IF + + EI+T + PI P+++ +VE + LL+ G++ SP+N+P+ IV K P+G RM +DF+ LN+VT ++P+P + L LG +K F+++DL ++Q+ + E+ K AFST G++ F R FGL APA F +++ IL+ I K VY+DDI++++ + +TH K L Sbjct: 88 LNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNL 298
BLAST of SMED30007150 vs. UniProt/SwissProt
Match: sp|Q99315|YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.573e-48 Identity = 53/152 (34.87%), Postives = 90/152 (59.21%), Query Frame = -1 Query: 4606 ITHEIKTSDPPILQNPRRQPMHL----EAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLM 5049 + H+I+ P + PR QP H+ E ++ ++VQ LL+ + +SP ++P+V+V K DG+ R+C+D+R LN T FP+P + LL +G ++IF+++DL Y+Q+ + + K AF T G++ + FGL AP+TF + M Sbjct: 584 VKHDIEIK--PGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYM 733 HSP 2 Score: 108.997 bits (271), Expect = 2.573e-48 Identity = 67/220 (30.45%), Postives = 114/220 (51.82%), Query Frame = -3 Query: 3830 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIK-EDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4486 L+N L V +KC F F+G+++ ++I + K + I + PK+ + + FLG+ NYYRRFI N S I+ P+ + WTE+ K LK LC +P+L + + TDAS +GA+L ++ ++ V+ Y S++L+ + Y ELL + + + HFR L+ + F RTDH +L + +P ++Q W+ +L+ Sbjct: 771 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ---WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPAR-RVQRWLDDLA 986
BLAST of SMED30007150 vs. TrEMBL
Match: W4XDF9 (Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.086e-87 Identity = 99/223 (44.39%), Postives = 141/223 (63.23%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + L+N+GLK+ PEKC + + F+GH VS + + T+ K+ I P+S E+RSFLGL +YYRR+I+ ++ I+ PL+ T + W E C F LK+ L +PIL Y +FI+DTDAS +GA+LSQ++E GTE V+ Y SR+L K E YCVTR+ELLA+ FI +FRQYLY R+F RTDH AL+++ + K+P Q+ W+ L Sbjct: 457 VFEQLKNAGLKLKPEKCHLFQQSVAFLGHVVSPEGVATDPAKVKSIREWPTPQSVREVRSFLGLASYYRRYIQGFANIAKPLHKLTE-KKRQYHWDESCESAFSMLKEKLTSSPILAYPTDGDEFILDTDASDVGIGAVLSQVQE-GTERVVGYASRSLSKPERNYCVTRRELLAVVHFIKYFRQYLYGRKFTVRTDHGALRWLLSFKEPEG-QVARWLQVLG 676 HSP 2 Score: 155.606 bits (392), Expect = 1.086e-87 Identity = 90/241 (37.34%), Postives = 136/241 (56.43%), Query Frame = -1 Query: 4603 KIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDP-PILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMH 5322 KI+ V ++ I ++ G I+ ++ K + ++ V + D + L K +K L L+ +F + F S DLG T +I H I T D PI Q PRR P +A+ +E V+ +L+ GVV SPW++P+V+V K DGS R C+D+R LN VT K ++P+P + + L +K FS++DL Y+QVEL+E ++ K AFST+ G F +N FGL AP+TF +LM Sbjct: 185 KIYKGTRVGMMKPIQMNCGGIERGIRNLSLEQKREDYVDEQ-VPEYLKDLAQRSCEHLDGKQEK--ALIALLREFKDTFAKSDSDLGRTGLIKHHIPTKDAAPIRQPPRRLPKWQQAEADEQVRKMLDRGVVEPSCSPWSSPVVLVKKKDGSTRFCVDYRRLNDVTIKDAYPIPRIDDTIQSLAGAKWFSTLDLASGYWQVELDEEAKGKSAFSTRMGLFQWNVMPFGLCNAPSTFERLME 422 HSP 3 Score: 26.5646 bits (57), Expect = 1.086e-87 Identity = 14/40 (35.00%), Postives = 20/40 (50.00%), Query Frame = -2 Query: 3711 QYNFALQYINREVHGNADDMSRLTNTICSYCQMGHKDAKE 3830 +YNF + + H NAD +SR+ C C G D +E Sbjct: 677 EYNFVIVHRAGRSHANADGLSRIP---CRQC--GRTDGEE 711
BLAST of SMED30007150 vs. TrEMBL
Match: A0A087SUZ9 (Retrovirus-related Pol polyprotein from transposon 412 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_16630 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.940e-85 Identity = 98/218 (44.95%), Postives = 140/218 (64.22%), Query Frame = -3 Query: 3833 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANL 4486 L+ + LK++P KC + + ++GH +S + ++T+ K+S +++ P++ +LRSFLGL YYRRF+K++S I+ PL+ T K VWT+EC F NLK+ L APIL Y D FI+DTDAS ++GA+LSQ E G E V+AY S+ L K E YCVTRKELLA+ + + HF YLY R+F+ RTDH +L ++ K P Q+ WI L Sbjct: 847 LKEANLKLSPAKCKLFRQEVTYLGHVISAEGVRTDPEKVSAVKDWRRPENVHQLRSFLGLCTYYRRFVKDFSSIARPLHKLTESKQKF-VWTKECENAFKNLKEALTSAPILTYPQLDRPFILDTDASNESVGAVLSQEIE-GQERVVAYWSKCLSKPERNYCVTRKELLAIVKAVEHFHHYLYGRKFLLRTDHASLAWLLNFKNP-EGQIARWIQRL 1061 HSP 2 Score: 154.066 bits (388), Expect = 3.940e-85 Identity = 73/171 (42.69%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 4603 LIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMH 5112 +I ++F S D+G T + H I T D PPI Q+PRR P+ + +V L++++ E+ V+ SPW +P+V+V K DGS R C+D+R LN VT+K S+P+P + +LD L SK FS++DL Y+QVE++ + + K AF+T +G + F FGL APATF +LM Sbjct: 638 VIKDLQDVFSRSSSDVGRTSLTQHRIDTGDHPPIKQHPRRLPIAKQEEVRALLKDMQESNVIEPSASPWASPIVLVRKKDGSTRFCVDYRRLNEVTKKDSYPLPRIDDILDTLSGSKWFSTLDLKSGYWQVEIHPDDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLME 808 HSP 3 Score: 24.6386 bits (52), Expect = 3.940e-85 Identity = 11/32 (34.38%), Postives = 18/32 (56.25%), Query Frame = -2 Query: 3738 QYNFALQYINREVHGNADDMSRL-TNTICSYC 3830 +Y+ +++ + HGNAD +SR C YC Sbjct: 1063 EYDITIRHRKGQSHGNADALSRRPCPENCRYC 1094
BLAST of SMED30007150 vs. TrEMBL
Match: A0A4Y2LHW1 (Transposon Ty3-I Gag-Pol polyprotein OS=Araneus ventricosus OX=182803 GN=TY3B-I_185 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 5.730e-85 Identity = 100/223 (44.84%), Postives = 142/223 (63.68%), Query Frame = -3 Query: 3833 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEE-VIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANL 4498 + L+ + LK++P+KC F + + ++GH +S + ++T+ KI + + P++ ++RSFLGL YYRRF+KN+S I+ PL+ T WTEEC K F +LK+ L +PIL Y D FI+DTDAS MGA+LSQ G EE VIAY S++L K E YCVTRKELLA+ + I HF YLY R+F+ RTDH +L+++ K+P Q+ WI L Sbjct: 699 VFQRLQKANLKLSPKKCRFFQKEVTYLGHVISAEGVKTDPGKIKAVVDWPRPETVHDVRSFLGLCTYYRRFVKNFSTIARPLHKLTEAKSN-FNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGMGAVLSQ--NTGNEERVIAYFSKSLGKPERNYCVTRKELLAIVKSIEHFHHYLYGRKFLLRTDHASLRWLLNFKEP-EGQIARWIQRL 917 HSP 2 Score: 150.599 bits (379), Expect = 5.730e-85 Identity = 85/236 (36.02%), Postives = 141/236 (59.75%), Query Frame = -1 Query: 4495 KRFTDSDRLKIMFLTLKL---DKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5190 + F+++ L + +L++ + ++ L+ +F N+F D+GH + H I T D PPI Q PRR P+ + + + LV+++++ G++ + PW TP+V+V K DGS R C+D+R LN +T+K S+P+P + LD L S+ F+++DL Y+QVE+ + K AF+T +G + F FG+ PATF +LM +L+G+ + +VYLDDI+I E H L +VF Sbjct: 465 QEFSEAQHLSSILESLEMLNEKQRREVRKLLKEFQNLFSTCDADVGHCNMTQHRINTGDHPPIKQYPRRLPLSRKEEADHLVKDMVDNGIIEESSGPWATPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDALDALNGSQWFTTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKVMPFGMPFTPATFERLMETVLRGLTSEACLVYLDDIIIVGRTFEEHLNNLRKVF 700 HSP 3 Score: 30.0314 bits (66), Expect = 5.730e-85 Identity = 19/54 (35.19%), Postives = 30/54 (55.56%), Query Frame = -2 Query: 3672 QYNFALQYINREVHGNADDMSRLTNT-ICSYCQMGHKDAKETKCRTSNIEVQIL 3830 +Y+F +Q+ HGNAD +SR T C +C K+AK+ +I V++L Sbjct: 919 EYDFEIQHRKGTSHGNADALSRRPCTQSCKHC----KNAKKKFGMEIDISVKVL 968
BLAST of SMED30007150 vs. TrEMBL
Match: A0A4Y2V331 (Retrovirus-related Pol polyprotein from transposon 297 OS=Araneus ventricosus OX=182803 GN=pol_3780 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 8.525e-85 Identity = 99/223 (44.39%), Postives = 142/223 (63.68%), Query Frame = -3 Query: 3833 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEE-VIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANL 4498 + L+N+ LK++P+KC F + + ++GH +S + ++T+ K + + P++ +LRSFLGL YYRRF+KN+S I+ PL+ T WTEEC K F +LK+ L +PIL Y D FI+DTDAS +GA+LSQ G EE VIAY S++L K E YCVTRKELLA+ + I HF YLY ++F+ RTDH +L+++ K+P Q+ WI L Sbjct: 849 VFQRLQNANLKLSPKKCRFFQKEVTYLGHVISAEGVKTDPGKTKAVVDWPRPETIHDLRSFLGLCTYYRRFVKNFSTIARPLHKLTETKSNF-NWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQ--NIGNEERVIAYFSKSLGKPERNYCVTRKELLAIVKSIEHFHHYLYGQKFLLRTDHASLRWLLNFKEP-EGQIARWIQRL 1067 HSP 2 Score: 152.525 bits (384), Expect = 8.525e-85 Identity = 85/218 (38.99%), Postives = 132/218 (60.55%), Query Frame = -1 Query: 4495 LKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5145 LK ++ + + L+ +F ++F D+G + H I T D PPI Q PRR P+ + + E LVQ +++ G++ + PW +P+V+V K DGS R C+D+R LN +T+K S+P+P + LD L S+ F+++DL Y+QVE+ + K AF+T +G + F FGL APATF +LM +L+G+ + +VYLDDI+I E H L +VF Sbjct: 633 LKEEQRTAVKKLLNEFQDLFSTCDADVGRCNMTQHRINTGDHPPIKQYPRRLPLARKEEAEHLVQEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQVEVRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIIIVGRTFEEHLSNLRKVF 850 HSP 3 Score: 31.187 bits (69), Expect = 8.525e-85 Identity = 14/40 (35.00%), Postives = 21/40 (52.50%), Query Frame = -2 Query: 3723 KFIQYNFALQYINREVHGNADDMSRLT-NTICSYCQMGHK 3839 + +Y+F +Q+ HGNAD +SR IC +C K Sbjct: 1066 RLQEYDFEIQHRKGSSHGNADALSRRPCGEICKHCSNAEK 1105
BLAST of SMED30007150 vs. TrEMBL
Match: A0A4Y2G3Y0 (Retrovirus-related Pol polyprotein from transposon 297 OS=Araneus ventricosus OX=182803 GN=pol_4134 PE=4 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.598e-84 Identity = 99/223 (44.39%), Postives = 142/223 (63.68%), Query Frame = -3 Query: 3833 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEE-VIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANL 4498 + L+ + LK++P+KC F + + ++GH +S + ++T+ KI + + P++ ++RSFLGL YYRRF+KN+S I+ PL+ T WTEEC K F +LK+ L +PIL Y D FI+DTDAS +GA+LSQ G EE VIAY S++L K E YCVTRKELLA+ + I HF YLY R+F+ RTDH +L+++ K+P Q+ WI L Sbjct: 311 VFQRLQKANLKLSPKKCRFFQKEVTYLGHVISAEGVKTDPGKIKAVVDWPRPETVHDVRSFLGLCTYYRRFVKNFSTIARPLHKLTEAKSNF-NWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQ--NIGNEERVIAYFSKSLGKPERNYCVTRKELLAIVKSIEHFHHYLYGRKFLLRTDHASLRWLLNFKEP-EGQIARWIQRL 529 HSP 2 Score: 154.066 bits (388), Expect = 1.598e-84 Identity = 86/236 (36.44%), Postives = 142/236 (60.17%), Query Frame = -1 Query: 4495 KRFTDSDRLKIMFLTLKL---DKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5190 + F+++ L + +L++ + ++ L+ +F N+F D+GH + H I T D PPI Q PRR P+ + + + LV+++++ G++ + PW +P+V+V K DGS R C+D+R LN +T+K S+P+P + LD L S+ F+++DL Y+QVE+ + K AF+T +G + F FGL APATF +LM +L+G+ + +VYLDDI+I E H L +VF Sbjct: 77 QEFSEAQHLSSILESLEMLNEKQRREVRKLLKEFQNLFSTCDADVGHCNMTQHRINTGDHPPIKQYPRRLPLSRKEEADHLVKDMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKEMPFGLCNAPATFERLMETVLRGLTSEACLVYLDDIIIVGRTFEEHLSNLRKVF 312 HSP 3 Score: 27.7202 bits (60), Expect = 1.598e-84 Identity = 14/37 (37.84%), Postives = 20/37 (54.05%), Query Frame = -2 Query: 3723 QYNFALQYINREVHGNADDMSRLTNT-ICSYCQMGHK 3830 +Y+F +Q+ HGNAD +SR T C +C K Sbjct: 531 EYDFEIQHRKGTSHGNADALSRRPCTESCKHCTNAEK 567
BLAST of SMED30007150 vs. Ensembl Cavefish
Match: ENSAMXT00000048272.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000106.1:219951:223307:1 gene:ENSAMXG00000032559.1 transcript:ENSAMXT00000048272.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 182.956 bits (463), Expect = 2.556e-80 Identity = 89/223 (39.91%), Postives = 135/223 (60.54%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + R + LK+ P KC + ++++GH VS + I T+ K+ +++ +P +E+R F+GL YYRRF+++++ I+ PL+ T + + WT EC+ F LK L P+L Y I+DTDAS +GA+LSQ+ +DG E V+AYGSR L E YC TR+ELLA+ EF HFRQYL R F+ R+DH +L+++ K+P QL W+ L+ Sbjct: 251 VFDRFRQANLKLKPTKCCLFRREVSYLGHIVSAQGIATDPEKVRKVQQWPQPTCVSEVRQFVGLAAYYRRFVQDFATIAKPLHELTKKHVR-FQWTPECQTAFEELKSSLTSTPVLGYPRDHGNLILDTDASNFGIGAVLSQV-QDGAERVLAYGSRRLSSTEQNYCTTRRELLAVVEFTRHFRQYLLGRPFIVRSDHSSLRWLVNMKEPEG-QLARWLEKLA 470 HSP 2 Score: 135.961 bits (341), Expect = 2.556e-80 Identity = 64/174 (36.78%), Postives = 105/174 (60.34%), Query Frame = -1 Query: 4606 KLGTLIYQFSNIFMASRFDLGHTKVITHEIKT-SDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLM 5124 +L L+ + ++F DLG T ++ H+I+ PP+ Q PRR + + + +Q LE+G+ S S W +P+V+V K D + R+C+D+R LN+ T K ++P+P +Q L+ L +K FS++DL Y+QV L ++ +AF +++G F +N FGL APATF +LM Sbjct: 42 ELAQLLSTYGDVFSTGPTDLGRTSLVQHDIQLLPGPPVKQQPRRMAFEKQIESDAQIQQSLESGLASPSNSSWASPIVLVRKKDQTYRLCVDYRALNARTVKDAYPLPRIQDTLETLSTAKWFSTLDLASGYWQVALTPRARKAVAFCSRKGLFTWNVMPFGLCNAPATFQRLM 215 HSP 3 Score: 24.2534 bits (51), Expect = 2.556e-80 Identity = 18/55 (32.73%), Postives = 26/55 (47.27%), Query Frame = -2 Query: 3678 KFIQYNFALQYINREVHGNADDMSRLT-NTICSYCQMGHKDAKETKCRTSNIEVQ 3839 K +Y+F + + H NAD MSR T C C M D + C+ ++ VQ Sbjct: 468 KLAEYDFQVVHRPGHHHQNADVMSRRPCRTTCP-CNM--TDPADVACKVTHRGVQ 519
BLAST of SMED30007150 vs. Ensembl Cavefish
Match: ENSAMXT00000034038.1 (pep primary_assembly:Astyanax_mexicanus-2.0:14:3120146:3124090:1 gene:ENSAMXG00000040885.1 transcript:ENSAMXT00000034038.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 160.229 bits (404), Expect = 1.462e-74 Identity = 91/238 (38.24%), Postives = 129/238 (54.20%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDK--------------MIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + LR GLK+ P+KC + + ++GH VS I+T+ KIS++ P++ EL FLG YYRRFI+ Y+ I+APLY T+G+ + +WTEEC F LK L AP+L Y+ F++ TDAS +GA+L+Q+ +DG E VIAY SR L E Y + E LAL + F +LY +F TD+ LK++ TT K + Q W+A LS Sbjct: 411 VFDRLRKYGLKLKPQKCHLLRREVLYLGHVVSSDGIKTDPDKISKVAGWKVPENRHELLQFLGFAGYYRRFIEGYASIAAPLYRLTSGDPRKKKRGRKGPPAVGLPFIWTEECENAFQTLKTKLTTAPVLGYADYSQPFVLQTDASLAGLGAVLAQV-QDGRERVIAYASRGLNPAETRYPAHKLEFLALKWAVTDKFYDHLYGHKFSVLTDNNPLKYVMTTAK-LDATGQRWVAQLS 646 HSP 2 Score: 142.51 bits (358), Expect = 1.462e-74 Identity = 71/170 (41.76%), Postives = 108/170 (63.53%), Query Frame = -1 Query: 4606 IYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQ--PMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLM 5109 I + S++F D GHT V+ HEI DP + P R+ P +A V + + + EAGV+ +SP+ +P+V+V K DGS+R+C+D+R LNS + + +FP+P ++ L+ LG++K FS++DL Y+QVE+ E + K AFST G F NR FGL +P+TF +LM Sbjct: 207 ILKNSDVFSKHHLDYGHTTVVKHEIPLVDPRPFRLPYRKIPPSQYQA-VRKAITEMEEAGVIRPSKSPYASPIVVVTKKDGSLRICMDYRKLNSCSTRDAFPLPRVEEALEALGEAKYFSTLDLTSGYWQVEVAEADKHKTAFSTPMGLFEANRMPFGLQNSPSTFQRLM 375
BLAST of SMED30007150 vs. Ensembl Cavefish
Match: ENSAMXT00000052546.1 (pep primary_assembly:Astyanax_mexicanus-2.0:2:13031363:13036570:1 gene:ENSAMXG00000033629.1 transcript:ENSAMXT00000052546.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 145.976 bits (367), Expect = 4.228e-71 Identity = 83/235 (35.32%), Postives = 126/235 (53.62%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKM--------IVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLK---KHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + LR+ GLK+ P KC K + F+GH +S K +Q + K+ +E PK+ ++R LG +YYRRF+ ++ ++ PL+A G KM I W+ EC+ F LK L P+L Y FI+ TD S +GA+LSQ K+ GTE VIAY SR L+ K++ Y + ELLAL + FR +L +F TDH L+++++ + Q W+A ++ Sbjct: 895 VFNRLRHHGLKLKPSKCFLLKPEVKFLGHIISAKGVQVDAEKVRVLETWPIPKTVKDIRQVLGFMSYYRRFVPKFAQLAKPLHALVGG--KMNRGRATGPITWSGECQTAFDKLKGCLMSPPVLAYPDFTQPFILTTDGSLHGLGAVLSQ-KQGGTERVIAYASRGLRGSEKNDKNYSAFKLELLALKWAVTEKFRDFLMFAKFSVVTDHNPLRYLDSANLGVVE--QRWVAQMA 1124 HSP 2 Score: 142.51 bits (358), Expect = 4.228e-71 Identity = 71/174 (40.80%), Postives = 110/174 (63.22%), Query Frame = -1 Query: 4606 KLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLM 5124 +L L+ + +IF S D G+T +TH I T D PP+ Q RR P + + ++ VQ+L++ G++ + SPW +P VIV K DG++R C D+R LN VT K ++P+P ++ LD LG ++ FS++DL Y+QV + ++ + K A +T G F ++R FGL APATF +LM Sbjct: 686 ELMDLLEKHKDIFSKSDSDFGYTTAVTHSIPTGDAPPVKQRHRRVPPQVFQEFKKHVQSLVDRGILEESCSPWASPAVIVIKKDGTVRFCCDYRRLNQVTCKDAYPLPRVEESLDALGNAQWFSTLDLTAGYFQVAVKDSDREKTAVTTPFGLFQWSRMPFGLCNAPATFQRLM 859 HSP 3 Score: 24.2534 bits (51), Expect = 4.228e-71 Identity = 10/27 (37.04%), Postives = 16/27 (59.26%), Query Frame = -2 Query: 3762 SKFIQYNFALQYINREVHGNADDMSRL 3842 ++ +YNF + Y + NAD +SRL Sbjct: 1121 AQMAEYNFDISYKPGRQNANADVLSRL 1147
BLAST of SMED30007150 vs. Ensembl Cavefish
Match: ENSAMXT00000048059.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001896.1:45492:48938:1 gene:ENSAMXG00000034382.1 transcript:ENSAMXT00000048059.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 154.836 bits (390), Expect = 1.369e-70 Identity = 89/238 (37.39%), Postives = 135/238 (56.72%), Query Frame = -3 Query: 3827 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGND------KMIV----WTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLK---KHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLSN 4498 + + L GLK+ P+KC +S + ++GH VS+ I + K+ ++ PKS TELR+FLGL YYRRF+K +S I+APL+ G+ K + W+ EC F +LK+ L +AP+L ++ F++ TDAS R +GA+LSQ K+DG E+VIAY SR L+ +++ Y + ELLAL I F +YL F TD+ L + T + + Q W+A L++ Sbjct: 313 VFSRLSQQGLKLKPDKCKLLRSSVQYLGHVVSDAGIAPDPDKVMAVQQWRVPKSITELRAFLGLAGYYRRFVKGFSQIAAPLHRLLGGHPTKKSKAKALCPPWKWSNECETAFESLKQGLVQAPVLAFADFTLPFLLYTDASHRGLGAVLSQ-KQDGQEKVIAYASRGLQGAERNDANYSSFKLELLALKWAITEKFHEYLLGSDFTVYTDNNPLAHLATAR--LGAVEQRWVARLAS 547 HSP 2 Score: 134.806 bits (338), Expect = 1.369e-70 Identity = 84/221 (38.01%), Postives = 137/221 (61.99%), Query Frame = -1 Query: 4492 LTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDP-PILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFT 5151 + L +++ KL TL+ + ++F D G T+ I HEI T D PI Q R+ P +L +V+ L++ +L+A ++ SPW++P+V+V K DGSIR C+D+R LN VT K S+P+P ++ L L K++ +S++DL Y+QV++++ K AF+T G F F R FGL APA+F +LM L + +++YLDD++++A + +H L VF+ Sbjct: 95 VQLSVEQKEKLATLLTKHQSVFSQHEEDYGCTETILHEIPTGDAAPIRQRYRQIPPNLYGEVKTLIKQMLDADIIKPSSSPWSSPIVLVRKKDGSIRFCVDYRQLNQVTRKDSYPLPRVEEALASLKKARWYSTLDLASGYWQVKMHQKDMDKTAFTTPMGLFEFQRMPFGLCNAPASFQRLMESCLGDQNYQSLLIYLDDVIVFAADFNSHLDRLDFVFS 315
BLAST of SMED30007150 vs. Ensembl Cavefish
Match: ENSAMXT00000038088.1 (pep primary_assembly:Astyanax_mexicanus-2.0:23:13869500:13874588:-1 gene:ENSAMXG00000037864.1 transcript:ENSAMXT00000038088.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.124 bits (357), Expect = 5.895e-68 Identity = 91/248 (36.69%), Postives = 146/248 (58.87%), Query Frame = -1 Query: 4495 EVNNIESSLVNKRFTDSDRLKIMFLTLKLD----KNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDP-PILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5223 EV+ IE+ V T ++ LT D + + L L++++S++F S D G T I H I T D P + R P ++ ++ L+ ++L+ GV+S+ SPW P+V+V K DGS R C+D+R LN+VT K +FP+P ++ L L +++ F+++DL Y+QV ++ + Q K AF+T G + F R FGL APATF +LM L+G + + + VYLDDI+I++ + H + L +VF Sbjct: 267 EVSVIETVPVG---TGGSTFEVSQLTTHTDLTTSQQAVLSQLLHKWSSVFSQSEEDFGCTDAIQHCIPTGDALPSRERFRPLPPNMYQEMRVLLADMLDKGVISESSSPWAAPVVMVRKKDGSWRFCVDYRKLNAVTHKDAFPLPRIEETLTTLTQAEWFTTLDLASGYWQVGVHPDDQPKTAFATPLGLYHFRRMPFGLCNAPATFQRLMQHCLRGQVAEFLFVYLDDIIIHSADFSLHVQHLEQVF 511 HSP 2 Score: 138.272 bits (347), Expect = 5.895e-68 Identity = 77/215 (35.81%), Postives = 122/215 (56.74%), Query Frame = -3 Query: 3875 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTG-------NDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNL---KKHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTK 4486 L GLK+ +KC + + F+GH V+++ + + K++ ++ P + E+R+FLGL YYRRFI ++ ++ PL + G + + I WT EC+ F LK L +APIL Y+ FI+ TDAS + +GA+LSQ+ +DG E VIAY SR+L +K++ Y + ELLAL + FR YL +F+ TD+ + + + K Sbjct: 514 LSRYGLKLRSDKCKLFRRQVKFLGHVVNKQGVHPDPEKVAAVQEWATPTTIREVRAFLGLAGYYRRFIDGFAKLARPLNSLLVGVPVNRKSSHRGINWTPECQNAFECLKSCLLQAPILAYADFSAPFIVYTDASSQGLGAVLSQM-QDGRERVIAYASRSLHPSEKNDANYSSFKLELLALKWAVTEKFRDYLMGSKFMVMTDNNPVAHLQSAK 727
BLAST of SMED30007150 vs. Ensembl Medaka
Match: ENSORLT00000040305.1 (pep primary_assembly:ASM223467v1:1:25459511:25466649:-1 gene:ENSORLG00000028409.1 transcript:ENSORLT00000040305.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 191.045 bits (484), Expect = 1.146e-83 Identity = 95/223 (42.60%), Postives = 142/223 (63.68%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + T LR + LK+ P KC + + ++GH VS + I T+ +KI ++++ PK+ +E+R F+GL +YYRRF+ +++ I+ PL+ T + WT EC++ F LK+ L APIL Y + + ++DTDAS +GA+LSQ+ + G E V+AYGSR L E YC TR+ELLA+ EF HFRQYL R FV RTDH +L+++ K+P QL W+ L+ Sbjct: 1005 VFTRLRQANLKLKPSKCRLFQEQVAYLGHVVSAQGISTDPQKIQKVQDWPIPKNISEVRQFVGLASYYRRFVADFATIARPLHELTKKYARFD-WTTECQEAFEELKERLTSAPILGYPLDSGELLLDTDASDWGVGAVLSQV-QGGEERVLAYGSRRLTTTEQNYCTTRRELLAVVEFTSHFRQYLLGRSFVLRTDHSSLRWLTRLKEPEG-QLARWLEKLA 1224 HSP 2 Score: 139.428 bits (350), Expect = 1.146e-83 Identity = 83/212 (39.15%), Postives = 125/212 (58.96%), Query Frame = -1 Query: 4492 KLGTLIYQFSNIFMASRFDLGHTKVITHEIKTS-DPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFT 5124 +L L+ +S++F A DLG T V+ H+I T+ + Q PRR + ++ VQ LEAG+ S W P+V+V K D S R+C+D+R LN T K ++P+P +Q LD L +K FS++DL Y+QVE+ ++ AF T++G F +N FGL APATF +LM ++L G+ + +VYLDDI++ N + L +VFT Sbjct: 796 RLAGLLRSYSDVFSAGSTDLGRTNVVQHDILTTPGSAVKQQPRRMSREKQEAADQQVQQSLEAGLARHSNSSWAAPIVMVKKKDQSPRLCVDYRPLNDRTIKDAYPLPRIQDTLDTLSTAKYFSTLDLTSGYWQVEMTPRARKAAAFCTRKGLFEWNVMPFGLCNAPATFQRLMDRVLAGLQWEACLVYLDDIIVLGCNSNQMMERLEQVFT 1007 HSP 3 Score: 24.2534 bits (51), Expect = 1.146e-83 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = -2 Query: 3765 KFIQYNFALQYINREVHGNADDMSR 3839 K +Y+F + + +VH NAD +SR Sbjct: 1222 KLAEYDFQVLHRPGKVHQNADALSR 1246
BLAST of SMED30007150 vs. Ensembl Medaka
Match: ENSORLT00000036827.1 (pep primary_assembly:ASM223467v1:16:28613823:28617539:1 gene:ENSORLG00000023550.1 transcript:ENSORLT00000036827.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 182.57 bits (462), Expect = 3.003e-80 Identity = 95/217 (43.78%), Postives = 136/217 (62.67%), Query Frame = -3 Query: 3827 SGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLSN 4477 +GLK++P+KC F + L F+GH + + I T + K+ + + P + +L+SFLGL +YYRRF++ +S I+APL+ D VWT+EC + F +LKK L +PIL FI+DTDAS MGA+LSQ+ G E V+AY S+ L K E YCVTR+ELLA+ + I HFR YL F RTDH AL+++ T K+P Q+ W+ L++ Sbjct: 453 AGLKLHPDKCCFMRRELEFLGHKIGGEGISTLEEKVQAVRDWPTPTTLRDLKSFLGLASYYRRFVRGFSCIAAPLFHLQR-KDCDFVWTQECEQAFSSLKKALTNSPILTPPDPKLPFILDTDASDVGMGAVLSQMGSAG-ERVVAYFSKTLSKAERRYCVTRRELLAVVKAIGHFRYYLCGLPFTVRTDHSALQWLMTFKEPEG-QIARWLEELAS 666 HSP 2 Score: 133.65 bits (335), Expect = 3.003e-80 Identity = 77/207 (37.20%), Postives = 123/207 (59.42%), Query Frame = -1 Query: 4531 LKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDP-PILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDG-SIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGN 5145 L+ + +L ++ ++ +IF S ++G T ++ HEI T D PI PRR P+ + + ++ +L G++ SPW + +V+V K G +R C+D+R LN VT+K S+P+P + LD + S FSS+DL Y+QV L+ ++ K AF T G + F SFGL APATF +LM ++L + + +VYLDDIL++ G+ Sbjct: 229 LQPGQKDELWKVLLEYRDIFALSEDEVGLTHLVHHEIDTGDARPIKTRPRRLPLAHQVAADSAIEEMLRGGIIEPSDSPWASGVVMVKKKKGPKMRFCVDYRPLNGVTKKDSYPLPRIDESLDLVSGSSWFSSLDLRSGYWQVPLSPAARPKTAFCTGRGLWQFRVLSFGLCNAPATFERLMEKVLASIPRQECLVYLDDILVHGGS 435 HSP 3 Score: 26.5646 bits (57), Expect = 3.003e-80 Identity = 13/46 (28.26%), Postives = 24/46 (52.17%), Query Frame = -2 Query: 3708 KFIQYNFALQYINREVHGNADDMSRLTNTI--CSYCQMGHKDAKET 3839 + ++F +++ H NAD MSR + C YC+ ++A+E Sbjct: 663 ELASFSFTVEHRPGSRHANADAMSRRPCALAGCQYCE--KREAREA 706
BLAST of SMED30007150 vs. Ensembl Medaka
Match: ENSORLT00000045141.1 (pep primary_assembly:ASM223467v1:23:22495254:22500491:-1 gene:ENSORLG00000029628.1 transcript:ENSORLT00000045141.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 147.902 bits (372), Expect = 1.822e-72 Identity = 95/253 (37.55%), Postives = 147/253 (58.10%), Query Frame = -1 Query: 4495 GMQLKEVNNIESSLVNKRFTDSDRLKIMFLT----LKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSD-PPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5238 G+ +K ++ IE V + +++RL + L + +L +L+ ++F + D G+T +TH I T D PPI Q RR P + + ++ V L+ G++ + SPW +P VIV K DGS+R C D+R LN VT K ++P+P ++ LD LG + +FS++DL Y+QV +NE Q K A +T G F + R FGL APATF +LM +L + ++VYLDDIL+Y+ + E+H + L VF Sbjct: 644 GLVVKHLDGIE---VTQLENEAERLPVPVQANTEGLTESQYQQLVSLLATHQDVFSQNENDYGYTTSVTHCISTGDAPPIKQRHRRVPPQVFQEFKKHVHELVSQGILKESTSPWASPAVIVIKKDGSVRFCCDYRRLNQVTCKDAYPLPRVEEALDALGDAHLFSTLDLTAGYFQVAMNEEDQGKTAVTTPFGLFEWTRMPFGLCNAPATFQRLMGLVLGDLSFDILLVYLDDILVYSRDFESHCERLGLVF 893 HSP 2 Score: 147.902 bits (372), Expect = 1.822e-72 Identity = 81/232 (34.91%), Postives = 125/232 (53.88%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYA-----ATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLK---KHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + LR GLK+ P KC + + F+GH +S + I+ + K+S + + P+S E+R +G +YYRRF+ N++ ++ PL+A ++ VWT +C+ LK+ L P+L Y FI+ TD S +GA+LSQ K+DG E V+AY SR L+ K++ Y + ELLAL I FR YL +F TDH L+++ T + Q W+A L+ Sbjct: 892 VFQRLRQHGLKLKPSKCFLLRPEVKFLGHLISAQGIKVDMEKVSALTSWPTPRSVKEVRQVVGFMSYYRRFVPNFAHMAKPLHALLGKRGKVNENQPFVWTADCQTALDELKQCLTSPPVLAYPDFQTPFILTTDGSSHGLGAVLSQ-KQDGVERVVAYASRGLRGSEKNDKYYSAFKLELLALKWAITEKFRDYLMFSKFTVVTDHNPLRYLGTAN--LGAVEQRWVAQLA 1120
BLAST of SMED30007150 vs. Ensembl Medaka
Match: ENSORLT00000044989.1 (pep primary_assembly:ASM223467v1:1:17572028:17576089:-1 gene:ENSORLG00000028051.1 transcript:ENSORLT00000044989.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 149.443 bits (376), Expect = 1.990e-71 Identity = 90/239 (37.66%), Postives = 133/239 (55.65%), Query Frame = -3 Query: 3830 SIHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAAT-----------TGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLK---KHEMGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4501 ++ LR +GLKV EKC F +S + F+GH +S I T+ K++ ++ P S ELRSFLG +YYRRF++ +S ++ PL+ A + N VWT EC+ F LK+ L AP+L Y+ FI++TDAS +GA+L QI +DG + VIAY SR L+ K++ Y + ELLAL + FR YL +F TD+ L +++ + + Q WIA L+ Sbjct: 444 TVFQRLRETGLKVKVEKCNFLQSSVRFLGHQISADGIGTDPDKVAAVKQWPVPASVKELRSFLGFCSYYRRFLQGFSQLAGPLHDAVNTCLNQSNMSRSKNLFKSVWTAECQDSFEELKERLTSAPLLGYANFSLPFILETDASSLGLGAVLYQI-QDGEKRVIAYASRRLRGAEKNDRNYSSMKLELLALKWAVSEKFRGYLLGAKFTVMTDNNPLCHLDSAR--LGAVEQRWIAQLA 679 HSP 2 Score: 142.895 bits (359), Expect = 1.990e-71 Identity = 88/232 (37.93%), Postives = 135/232 (58.19%), Query Frame = -1 Query: 4480 DRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIK-TSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5172 D LKI T ++ ++L LI Q++++F S DLG+ I HEI T D P+ Q RR P +V++ + LL GV+ + S + +P+V+V K D S+R+C+D+R LN+ T + +FP+P + D L +K FS+IDL Y+QV ++EN + K AF T G F + R FG+ PATF +LM + ++ + ++VYLDDIL+Y+ + H L VF E Sbjct: 223 DHLKIGGTT---EQQTRLAKLISQYTDVFALSDEDLGYADRIQHEIHLTDDVPVTQPYRRVPPTQYKEVKDHIAQLLRKGVIQESTSAYASPIVLVRKADNSLRLCVDYRRLNAKTRRDAFPLPRIDECFDALHGAKFFSTIDLASGYHQVAVHENDRHKTAFITPFGLFEYTRLPFGVCNGPATFQRLMQATMSDLVFQIMLVYLDDILVYSPTFDGHLTRLQTVFQRLRE 451
BLAST of SMED30007150 vs. Ensembl Medaka
Match: ENSORLT00000032005.1 (pep primary_assembly:ASM223467v1:7:31190450:31194463:1 gene:ENSORLG00000029990.1 transcript:ENSORLT00000032005.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 145.591 bits (366), Expect = 6.540e-68 Identity = 73/184 (39.67%), Postives = 109/184 (59.24%), Query Frame = -1 Query: 4600 TLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKT-SDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQ 5148 TL + K L+ +++N+F A DLG T ++THEI D P+ Q RR P V++ + LL +GV+ + SP+ +P+V+ K DGS+RMC+D+R LNS T + +FP+P + LD L ++ F+++DL Y QV + E + K AF T G F +NR FGL AP TF +LM + Sbjct: 269 TLPAEDRGKARALLQKYANVFAAHEGDLGCTTLMTHEIPLLDDAPVRQRHRRIPPSEYEAVKDHINQLLASGVIRESNSPYASPIVLARKKDGSLRMCVDYRQLNSKTRRDAFPLPPIDESLDALSGARWFTTLDLASGYNQVPVTEGDRAKTAFCTPFGLFEWNRMPFGLCNAPGTFQRLMQR 452 HSP 2 Score: 134.806 bits (338), Expect = 6.540e-68 Identity = 79/234 (33.76%), Postives = 124/234 (52.99%), Query Frame = -3 Query: 3830 LRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIV-----------WTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHE---MGYCVTRKELLALHEFIVH-FRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4486 L+ L+V KCAF + + ++GH +S++ + T+ KI + P + +ELR+FLG +YYRRF++ ++ ++APL+ D WT EC++ F LK+ L AP+L Y+ FI++ DAS +GA+LSQ ++ G+ IAY SR LK E Y + E LAL + FR+YL V TD+ L +++T K + Q W+A L+ Sbjct: 488 LQQEKLRVKLPKCAFFQQEVRYLGHVISDQGVSTDPHKIEAVAGWQPPSTVSELRTFLGFASYYRRFVEGFARLAAPLHRLVGELDGTKSRRRKASSLQGHWTTECQQNFDALKQKLTSAPVLAYADFTLPFILEVDASHNGLGAVLSQ-EQGGSVRPIAYASRGLKATERNMQNYSSMKLEFLALKWAMTEKFREYLLGHHCVVFTDNNPLSYLSTAK--LGAMEQRWVAQLA 718
BLAST of SMED30007150 vs. Planmine SMEST
Match: SMESG000081257.1 (SMESG000081257.1) HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0 Identity = 303/358 (84.64%), Postives = 322/358 (89.94%), Query Frame = -1 Query: 4492 VEKNDVMFKKNDDRKWSMKKITFFHVEMLWDSGTSISVMSEKCWGLIGSSILMDSRIRVSEVFSKENEKLLESVKIVAK*NKIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFT 5565 + NDVMFKK+DDRKWS+ +I FHVEMLW+SG SISVMSEKCW LIGS ILMDSRI +SEVFS E++K L SVKIVAK NK F ELNVIIV KIH +FIGGVD++KIFGM+LKEVNNIESSLVNKRFTDSDRLK LTLKLDKNS+LGTLI QFSNIFMASRFDLGHTKVITHE+KTS PPILQNPR QPMHLEAKVEELVQNLLEAGVV KCQSPWNTPLVIVGKPDGS+R+CLDFRLLNSVTEKFSFPMP MQLLLD LGKSKIF SIDLGQAYY VELNENSQIK AFSTKEGQFCFNR FGLSTAPATF KLMHQIL+G++ KGVVVYLDDILIY NQETHDK LFEVFT Sbjct: 270 ISSNDVMFKKDDDRKWSIMEINGFHVEMLWNSGASISVMSEKCWRLIGSPILMDSRILLSEVFSNEDKKPLGSVKIVAKWNKKFRELNVIIVRKIHPNFIGGVDTMKIFGMELKEVNNIESSLVNKRFTDSDRLKNTLLTLKLDKNSELGTLISQFSNIFMASRFDLGHTKVITHELKTSGPPILQNPRGQPMHLEAKVEELVQNLLEAGVVRKCQSPWNTPLVIVGKPDGSVRICLDFRLLNSVTEKFSFPMPDMQLLLDCLGKSKIFYSIDLGQAYYLVELNENSQIKTAFSTKEGQFCFNRLPFGLSTAPATFQKLMHQILEGLVFKGVVVYLDDILIYGENQETHDKLLFEVFT 627 HSP 2 Score: 374.4 bits (960), Expect = 0.000e+0 Identity = 183/221 (82.81%), Postives = 197/221 (89.14%), Query Frame = -3 Query: 5627 NDGLKKNISTKVNITRE*I*NLTKVYEA*EVYDTKERFEEVQAVVKSTYTNVTQDKQKQWIQKSFNNRIYPNRQTEITYQNRNERNKRQFDKVKPVA*QYNEKTTTERRPPPLVSIKHIARKIYNRCCGLPEPVEERLKPGQCFCCG*IDHIRFECPLKDKCLICGKEGHSFRSCNLLVKSRSNTQRLERRVYCIHEENDDRSDELIERLIHNVETKKTKK 6289 ND LK N+STK NITRE I NL KV+EA E Y+TKER EEVQ VVKS Y NVTQDKQKQWIQKSFNNRIYPNRQT+I+YQNRNERN+RQFDKVKPV QYNE+TT ERRPPPL+S+KHI RKIYNR CGLPEPVEERLKPG+CFCCG DH+RFECPLKDKCLICGKEGHSFR NLLVKSRSNTQRLER VYCIH+ENDDRSDELIE LIHNVETKK ++ Sbjct: 44 NDRLKGNLSTKDNITREEIRNLAKVHEAREGYNTKERSEEVQVVVKSIYANVTQDKQKQWIQKSFNNRIYPNRQTDISYQNRNERNERQFDKVKPVTKQYNERTTMERRPPPLISMKHITRKIYNRFCGLPEPVEERLKPGKCFCCGQNDHMRFECPLKDKCLICGKEGHSFRCFNLLVKSRSNTQRLERSVYCIHKENDDRSDELIEPLIHNVETKKNQE 264 HSP 3 Score: 353.214 bits (905), Expect = 0.000e+0 Identity = 174/223 (78.03%), Postives = 184/223 (82.51%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + T +R+SGLKVNPEKCAFNKSVLNFIGHTVSEK IQTNKRKISEIEN+TEPKSTTELRSFLGL YYRRFIKNYSMI+APLYAATTG DKMIVWTEECRKRFINLKKLLCEAPIL+Y AD FIIDTD SF A+G +L KHE+GYCVTRKELL LHEFIVHFRQYLY RRFV RTDHKAL FMNTTKKPISPQ QTW+AN S Sbjct: 625 VFTRIRDSGLKVNPEKCAFNKSVLNFIGHTVSEKGIQTNKRKISEIENATEPKSTTELRSFLGLTTYYRRFIKNYSMIAAPLYAATTGCDKMIVWTEECRKRFINLKKLLCEAPILEYPRADRLFIIDTDDSFEAIG--------------------HLTKHEIGYCVTRKELLVLHEFIVHFRQYLYGRRFVARTDHKALTFMNTTKKPISPQFQTWMANFS 827 HSP 4 Score: 189.119 bits (479), Expect = 2.834e-60 Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = -1 Query: 3283 SSNIMKIIKQKQNEDRVTSEIISHLNGNEAHISYETISSSIFKYLKILQIQDDLLMINTDEKLAVVVPDSYVKCLVNYFHLNYAIWVSRKPYFI*RTFSFGHP*IRLL-QCINKCKICASRKIDKGRTKEILLTR 3684 SSNIMKIIKQKQNED+VTS+IISHLNGNEAHISY+TISSSIFKYLKILQIQD++LMINTD KLAVVVPDSYVK LVNYFH+ K F + F F +++ +CINKCKICASRKID+GRTKEILL R Sbjct: 881 SSNIMKIIKQKQNEDKVTSQIISHLNGNEAHISYKTISSSIFKYLKILQIQDNVLMINTDGKLAVVVPDSYVKSLVNYFHIELCHLGINKTLFYLKDFFFLPSMNQIITECINKCKICASRKIDQGRTKEILLPR 1015 HSP 5 Score: 65.4698 bits (158), Expect = 2.834e-60 Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = -2 Query: 3696 KKTNKPTTSDMDSKFIQYNFALQYINREVHGNADDMSRLTNTICSYCQMGHKDAKETKCRT 3878 KK P + F +Y+FALQY HGNA SRL NTICS+ QM HKDAK+ KCRT Sbjct: 812 KKPISPQFQTWMANFSEYDFALQYRKGNEHGNAGGWSRLNNTICSHYQMEHKDAKKAKCRT 872 HSP 6 Score: 73.9442 bits (180), Expect = 1.441e-12 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = -1 Query: 6289 VRKNNDERFATFEIRVKKLIDEGYDCGISKENIVKLILYHRIR 6417 +R+N+DERF TFEIRVKKL+DE YDCGISKENIVKL+L H +R Sbjct: 1 MRQNHDERFVTFEIRVKKLVDEVYDCGISKENIVKLVLCHGVR 43
BLAST of SMED30007150 vs. Planmine SMEST
Match: SMESG000065302.1 (SMESG000065302.1) HSP 1 Score: 503.442 bits (1295), Expect = 0.000e+0 Identity = 284/391 (72.63%), Postives = 305/391 (78.01%), Query Frame = -1 Query: 4480 MLRQKKPRRPRCLYFISRVETVDEFKKRNVEKNDVMFKKNDDRKWSMKKITFFHVEMLWDSGTSISVMSEKCWGLIGSSILMDSRIRVSEVFSKENEKLLESVKIVAK*NKIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFTHTLE 5652 M R+KKPRR CL+F+S+V+TVDEF KRNV K + MFKK+DDRKWSM +I FH+EMLWDSG SISVMSEKCW LIGS ILMDSRIR+S VFSKE EK SVKIVAK NK E NVIIV KIH DFIGGVD++KIF M+LKEVN IESSLVNKRFTDSDRLK LTLKLDKNSKLGTLI QFSNIFMAS+FDLGH ++NLL AGVV KCQS WNTPLVIVGKPDGS RMCLDFR LNSVTEK SFPMP MQLLLD LGKSKI SSIDL Q YYQVELNENSQIK AFSTKEGQFCFNR FGLSTAPATF KLMHQIL+G++ K VVVYLDDIL YA NQETHDK LFEVFT ++ Sbjct: 1 MSRRKKPRRTCCLHFVSKVKTVDEFNKRNVGKKNEMFKKDDDRKWSMMEINGFHLEMLWDSGASISVMSEKCWRLIGSPILMDSRIRLSGVFSKEYEKPFGSVKIVAKRNKKVREFNVIIVRKIHPDFIGGVDTMKIFCMKLKEVNIIESSLVNKRFTDSDRLKNTLLTLKLDKNSKLGTLISQFSNIFMASKFDLGH---------------------------------IKNLLVAGVVRKCQSSWNTPLVIVGKPDGSSRMCLDFRCLNSVTEKVSFPMPDMQLLLDCLGKSKILSSIDLRQVYYQVELNENSQIKTAFSTKEGQFCFNRLPFGLSTAPATFQKLMHQILEGLVFKRVVVYLDDILKYAENQETHDKLLFEVFTRIID 358 HSP 2 Score: 230.335 bits (586), Expect = 0.000e+0 Identity = 120/187 (64.17%), Postives = 129/187 (68.98%), Query Frame = -3 Query: 3938 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYL 4498 + T + +SGLKV+P KCAFNKS+LNFI HTVSEK IQTNK K SEI N E KSTTELRSFLGL NYYRRFIKNYSMI+APLYAATTGNDKMIVWTEEC A+LSQIKEDGTE VIAY SR+L HEMGYCV RKELL L+E IVHFRQYL Sbjct: 352 VFTRIIDSGLKVSPAKCAFNKSLLNFINHTVSEKGIQTNKGKFSEIVNPIETKSTTELRSFLGLTNYYRRFIKNYSMIAAPLYAATTGNDKMIVWTEEC--------------------------------------AVLSQIKEDGTEGVIAYVSRHLTNHEMGYCVIRKELLVLYELIVHFRQYL 500 HSP 3 Score: 186.422 bits (472), Expect = 0.000e+0 Identity = 98/137 (71.53%), Postives = 110/137 (80.29%), Query Frame = -1 Query: 3283 YRSSNIMKIIKQKQNEDRVTSEIISHLNGNEAHISYETISSSIFKYLKILQIQDDLLMINTDEKLAVVVPDSYVKCLVNYFHLNYAIWVSRKPYFI*RTFSFGHP*IRLL-QCINKCKICASRKIDKGRTKEILLTR 3690 + SSNIMKIIKQKQNEDRVTSEIISH GNEAHISYETISSSIFKYLKILQIQDD+LMIN+D KLAVVVPDSYVK LVNYF++ +K F + F F +++ +CINKCKICASRKID+GR KEIL R Sbjct: 572 HGSSNIMKIIKQKQNEDRVTSEIISHFIGNEAHISYETISSSIFKYLKILQIQDDVLMINSDGKLAVVVPDSYVKSLVNYFYIEQGYLGIKKTLFCLKGFFFWPSMNQIITECINKCKICASRKIDQGRRKEILFPR 708 HSP 4 Score: 95.1301 bits (235), Expect = 0.000e+0 Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = -2 Query: 3696 EKICRQNRSQGIEIYEYNKKTNKPTTSDMDSKFIQYNFALQYINREVHGNADDMSRLTNTICSYCQMGHKDAKETKCRT 3932 +KIC QN SQGIEIYEYNK+TNKPT SD I E HGN+D +SRL NTICS+CQ+ KD+KE KCRT Sbjct: 501 DKICSQNGSQGIEIYEYNKETNKPTISD--------------IKGEEHGNSDGISRLNNTICSHCQIEQKDSKEGKCRT 565
BLAST of SMED30007150 vs. Planmine SMEST
Match: SMESG000038955.1 (SMESG000038955.1) HSP 1 Score: 441.81 bits (1135), Expect = 0.000e+0 Identity = 250/339 (73.75%), Postives = 270/339 (79.65%), Query Frame = -1 Query: 4492 KITFFHVEMLWDSGTSISVMSEKCWGLIGSSILMDSRIRVSEVFSKENEKLLESVKIVAK*NKIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVFT 5508 +I FHV+MLWDSG SISVMS+K W LIG ILMDSRIR+S VFSKE+EK L SVKIVAK NK +++ + H + + G KEVNNIES LVNK+FTDSDRLKI TLKLDKNSKLGTLI +FSNIFMASRFDLGHTKVITHEIK ++PMHLE KVEELVQNLLEAGVV K SPWNTPLVIVGK DGSIRMCLDFRLLNSVTEKFSF P M+LLLD LG SKIFSSIDLGQAYYQVELNENSQIK AFSTKEGQFCFNR FGLSTAPATF KLMHQIL+G++ KGVVVYLD+ILIY NQE HDK LFEVFT Sbjct: 2 EINGFHVDMLWDSGASISVMSDKYWRLIGRPILMDSRIRLSGVFSKEDEKPLGSVKIVAKWNK---KVSFHRRSRHHENILHGA----------KEVNNIESLLVNKKFTDSDRLKITLSTLKLDKNSKLGTLISKFSNIFMASRFDLGHTKVITHEIK-----------KKPMHLEGKVEELVQNLLEAGVVRKSISPWNTPLVIVGKLDGSIRMCLDFRLLNSVTEKFSFYSPDMKLLLDCLGNSKIFSSIDLGQAYYQVELNENSQIKTAFSTKEGQFCFNRLPFGLSTAPATFQKLMHQILEGLVFKGVVVYLDEILIYGENQEIHDKLLFEVFT 316 HSP 2 Score: 300.442 bits (768), Expect = 0.000e+0 Identity = 149/223 (66.82%), Postives = 162/223 (72.65%), Query Frame = -3 Query: 3830 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4498 + T +R+SGLKVNPEKCAFNKSVLNFIGHT NYS+I+AP+Y ATTGNDKMIVWTEECR FINLKKLLCEAPIL+Y AD F+IDTDASF A+GA+LSQIKED TE VIAYGSR+L KHEMG+CVT KELLALHEFIVHFRQYLY RRFV RTDHKAL FMNTTKKPISPQ QTW+ANLS Sbjct: 314 VFTRIRDSGLKVNPEKCAFNKSVLNFIGHT-------------------------------------------NYSIIAAPMYVATTGNDKMIVWTEECRNSFINLKKLLCEAPILEYPRADRLFVIDTDASFGAIGAVLSQIKEDCTEVVIAYGSRHLTKHEMGHCVTIKELLALHEFIVHFRQYLYGRRFVARTDHKALTFMNTTKKPISPQFQTWMANLS 493 HSP 3 Score: 121.324 bits (303), Expect = 1.860e-39 Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = -1 Query: 3475 SSNIMKIIKQKQNEDRVTSEIISHLNGNEAHISYETISSSIFKYLKILQIQDDLLMINTDEKLAVVVPDS 3684 SSNIMKIIK KQNEDRVTSE ISHLNGNEAHISYETISS IFKYLK LQIQDD+LMINTD KLAVVVPDS Sbjct: 547 SSNIMKIIK-KQNEDRVTSENISHLNGNEAHISYETISSRIFKYLKRLQIQDDVLMINTDGKLAVVVPDS 615 HSP 4 Score: 63.1586 bits (152), Expect = 1.860e-39 Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = -2 Query: 3687 KKTNKPTTSDMDSKFIQYNFALQYINREVHGNADDMSRLTNTICSYCQMGHKDAKETKCRTSNI 3878 KK P + +++FALQY E HGNAD SRL NT CS+C M +KDAKE KCRT I Sbjct: 478 KKPISPQFQTWMANLSEHDFALQYRKGEEHGNADGKSRLNNTKCSHCLMENKDAKEAKCRTRYI 541
BLAST of SMED30007150 vs. Planmine SMEST
Match: SMESG000029320.1 (SMESG000029320.1) HSP 1 Score: 427.943 bits (1099), Expect = 0.000e+0 Identity = 218/266 (81.95%), Postives = 229/266 (86.09%), Query Frame = -1 Query: 4846 QKKPRRPRCLYFISRVETVDEFKKRNVEKNDVMFKKNDDRKWSMKKITFFHVEMLWDSGTSISVMSEKCWGLIGSSILMDSRIRVSEVFSKENEKLLESVKIVAK*NKIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFR 5643 +K PRRP CL+F+SRVETVDEFKKRNVEK DV+FKK+DDRKWSM +I FHVEMLWDSG SI VMSEKCW LI DSR R+S VFSKE+EK L SVKI AK NK F ELNVIIV KIH DFIGGV ++KIFGM+LKEVNNIESSLVNKR TDSDRLK LTLK DKNSKLGTLI QFSNIFMASRFDLGHTKVITHEIKTS PPILQNPRRQPMHLE KVEELVQNLLE VV KCQSPWNTPLVIVGKPDGSIRMCLDFR Sbjct: 234 KKIPRRPFCLHFVSRVETVDEFKKRNVEKKDVIFKKDDDRKWSMMEINGFHVEMLWDSGASIRVMSEKCWRLI------DSRERLSGVFSKEDEKPLGSVKIFAKWNKKFRELNVIIVRKIHPDFIGGVYTMKIFGMELKEVNNIESSLVNKRVTDSDRLKNTLLTLKFDKNSKLGTLISQFSNIFMASRFDLGHTKVITHEIKTSGPPILQNPRRQPMHLEGKVEELVQNLLE-DVVRKCQSPWNTPLVIVGKPDGSIRMCLDFR 492 HSP 2 Score: 308.531 bits (789), Expect = 0.000e+0 Identity = 161/224 (71.88%), Postives = 168/224 (75.00%), Query Frame = -3 Query: 5618 NDGLKKNISTKVNITRE*I*NLTKVYEA*EVYDTKERFEEVQAVVKSTYTNVTQDKQKQWIQKSFNNRIYPNRQTEITYQNRNERNKRQFDKVKPVA*QYNEKTTTERRPPPLVSIKHIARKIYNRCCGLPEPVEERLKPGQCFCCG*IDHIRFECPLKDKCLICGKEGHSFRSCNLLVKSRSNTQRLERRVYCIHEENDDRSDELIERLIHNVETKKTKKTPL 6289 ND LK+NISTK NITRE I NL KVYEA E YDTK+R EEVQAV+KSTY NVTQDKQKQWIQKSFNNRIYPN QTEITYQNRNERN+RQFDKV +PVEERLKPGQCFCCG DH+RFEC LKDKCLICGKEGHSFRSCNLLVKSRSNTQRLERRVYCIHEENDDRSDELIE LIHNVETKK + P Sbjct: 53 NDRLKENISTKANITREEIRNLAKVYEAREGYDTKKRSEEVQAVIKSTYVNVTQDKQKQWIQKSFNNRIYPNLQTEITYQNRNERNERQFDKVTTF-----------------------------------KPVEERLKPGQCFCCGQNDHLRFECTLKDKCLICGKEGHSFRSCNLLVKSRSNTQRLERRVYCIHEENDDRSDELIEPLIHNVETKKIPRRPF 241 HSP 3 Score: 93.5893 bits (231), Expect = 0.000e+0 Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = -1 Query: 6289 MDKICELSSVRKNNDERFATFEIRVKKLIDEGYDCGISKENIVKLILYHRIR 6444 MDKICELSSVR+N DERF TFEIRVKKL+DE YDCGISKENIVKLIL HR++ Sbjct: 1 MDKICELSSVRQNPDERFVTFEIRVKKLVDEVYDCGISKENIVKLILCHRVQ 52 HSP 4 Score: 186.422 bits (472), Expect = 8.789e-48 Identity = 88/103 (85.44%), Postives = 92/103 (89.32%), Query Frame = -3 Query: 3830 AD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQTWIANLS 4138 AD FIIDTDASF A+GA+LSQIKED TE VIAYGSR+L KHEMGYCVTRKELLA+HEFIVHFRQYLY RRFV RTDHKAL FMNT KKPISPQ QTWIANLS Sbjct: 493 ADRLFIIDTDASFGAIGAVLSQIKEDSTEGVIAYGSRHLAKHEMGYCVTRKELLAIHEFIVHFRQYLYGRRFVARTDHKALTFMNTAKKPISPQFQTWIANLS 595
BLAST of SMED30007150 vs. Planmine SMEST
Match: SMESG000035021.1 (SMESG000035021.1) HSP 1 Score: 420.624 bits (1080), Expect = 0.000e+0 Identity = 243/348 (69.83%), Postives = 264/348 (75.86%), Query Frame = -1 Query: 4495 KNDDRKWSMKKITFFHVEMLWDSGTSISVMSEKCWGLIGSSILMDSRIRVSEVFSKENEKLLESVKIVAK*NKIFLELNVIIVGKIHLDFIGGVDSIKIFGMQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFMASRFDLGHTKVITHEIKTSDPPILQNPRRQPMHLEAKVEELVQNLLEAGVVSKCQSPWNTPLVIVGKPDGSIRMCLDFRLLNSVTEKFSFPMPGMQLLLDYLGKSKIFSSIDLGQAYYQVELNENSQIKMAFSTKEGQFCFNRFSFGLSTAPATF*KLMHQXXXXXXXXXXXXXXXDILIYAGNQETHDKFLFEVF 5538 KND RKWSM ++ FHVEMLWDSG SISV+SEKCW LIGS ILMDSRIR+S VF KE+EKLL S KIVAK NK F +LNVIIV KI+ DFIGGVD+IKIFGM+LKEVNNIES LVNKRFTDS+ LKI LTLK DKN+KLGTLI+QFSNIFMASRFD GH KVI HEIKTSD PILQN RRQ MHLE KVEELVQNLLEAGV+ K QSPWNTPLVIVGKPD S ++ QAYYQVELNENSQIK AFSTKEGQ CFNR GLSTAPATF K ++Q LKG++ KG V+YLDDILIYA NQET+DK LFEVF Sbjct: 2 KNDGRKWSMMRLNGFHVEMLWDSGASISVISEKCWRLIGSPILMDSRIRLSGVFPKEDEKLLGS-KIVAKWNKKFRKLNVIIVRKIYPDFIGGVDTIKIFGMELKEVNNIESLLVNKRFTDSELLKITLLTLKFDKNTKLGTLIFQFSNIFMASRFDFGHIKVIAHEIKTSDSPILQNSRRQLMHLEGKVEELVQNLLEAGVLRKSQSPWNTPLVIVGKPDDS-------------------------------------KNVSRFQAYYQVELNENSQIKTAFSTKEGQLCFNRLPIGLSTAPATFQKHINQTLKGLVFKGEVLYLDDILIYAENQETYDKLLFEVF 311 HSP 2 Score: 302.753 bits (774), Expect = 0.000e+0 Identity = 152/216 (70.37%), Postives = 166/216 (76.85%), Query Frame = -3 Query: 3851 IHTHLRNSGLKVNPEKCAFNKSVLNFIGHTVSEKEIQTNKRKISEIENSTEPKSTTELRSFLGLKNYYRRFIKNYSMISAPLYAATTGNDKMIVWTEECRKRFINLKKLLCEAPILKYSMAD*QFIIDTDASFRAMGAILSQIKEDGTEEVIAYGSRNLKKHEMGYCVTRKELLALHEFIVHFRQYLYRRRFVDRTDHKALKFMNTTKKPISPQLQ 4498 + +R+SGLK NPEKCAFNKSVLNFIGHTVSEK IQTNKRKISEIEN+TEPKSTTELRSFLGL N+Y+RFIKNYSMI+ PLY ATT APIL+Y AD FIIDTD SF A+GA+LSQIKEDGTE VIAYGSR+L +HEM YC+TRKEL ALHEFIVHFRQYLY +RFV R DHKAL FMNTTKKPIS Q Sbjct: 310 VFIRIRDSGLKANPEKCAFNKSVLNFIGHTVSEKGIQTNKRKISEIENATEPKSTTELRSFLGLTNFYQRFIKNYSMIAEPLYTATT-------------------------APILEYPRADRLFIIDTDDSFGAIGAVLSQIKEDGTEGVIAYGSRHLTEHEMEYCMTRKELFALHEFIVHFRQYLYGKRFVARMDHKALTFMNTTKKPISSQFH 500 The following BLAST results are available for this feature:
BLAST of SMED30007150 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of SMED30007150 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30007150 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30007150 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30007150 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30007150 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of SMED30007150 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30007150 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30007150 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30007150 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30007150 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30007150 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30007150 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30007150 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007150 ID=SMED30007150|Name=SMED30007150|organism=Schmidtea mediterranea sexual|type=transcript|length=6447bpback to top protein sequence of SMED30007150-orf-1 >SMED30007150-orf-1 ID=SMED30007150-orf-1|Name=SMED30007150-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=207bp MQLKEVNNIESSLVNKRFTDSDRLKIMFLTLKLDKNSKLGTLIYQFSNIFback to top protein sequence of SMED30007150-orf-2 >SMED30007150-orf-2 ID=SMED30007150-orf-2|Name=SMED30007150-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=291bp MKFYLFPLMILIIIELSMSCFEPKIAMNYCIKLNNFPEYDWTLKGYDFGFback to top protein sequence of SMED30007150-orf-3 >SMED30007150-orf-3 ID=SMED30007150-orf-3|Name=SMED30007150-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=109bp MLRQKKPRRPRCLYFISRVETVDEFKKRNVEKNDVMFKKNDDRKWSMKKIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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