Protein mago nashi homolog

Overview
NameProtein mago nashi homolog
Smed IDSMED30007066
Length (bp)560
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protein mago nashi homolog (SMED30007066) t-SNE clustered cells

Violin plots show distribution of expression levels for Protein mago nashi homolog (SMED30007066) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protein mago nashi homolog (SMED30007066) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protein mago nashi homolog (SMED30007066) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30007066

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
muscle cellSMED30007066h1SMcG0009211 dd_Smed_v4_1217_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
central nervous systemSMED30007066h1SMcG0009211 DN298962smed_ncbi_20240424PMID:16344473
Zayas et al., 2005
whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30007066h1SMcG0009211 DN298962smed_ncbi_20240424PMID:16344473
Zayas et al., 2005
whole organism adult hermaphrodite colorimetric in situ hybridization evidence
central nervous systemSMED30007066h1SMcG0009211 DN296471smed_ncbi_20240424PMID:16344473
Zayas et al., 2005
whole organism adult hermaphrodite colorimetric in situ hybridization evidence
ovarySMED30007066h1SMcG0009211 DN296471smed_ncbi_20240424PMID:16344473
Zayas et al., 2005
whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30007066h1SMcG0009211 DN296471smed_ncbi_20240424PMID:16344473
Zayas et al., 2005
whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Protein mago nashi homolog vs. Ensembl Human
Match: MAGOHB (mago homolog B, exon junction complex subunit [Source:HGNC Symbol;Acc:HGNC:25504])

HSP 1 Score: 243.817 bits (621), Expect = 4.411e-83
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 ASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. Ensembl Human
Match: MAGOH (mago homolog, exon junction complex subunit [Source:HGNC Symbol;Acc:HGNC:6815])

HSP 1 Score: 242.276 bits (617), Expect = 1.641e-82
Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 1
Query:   55 NEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            ++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 SDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 142          
BLAST of Protein mago nashi homolog vs. Ensembl Human
Match: MAGOH (mago homolog, exon junction complex subunit [Source:HGNC Symbol;Acc:HGNC:6815])

HSP 1 Score: 172.17 bits (435), Expect = 2.450e-55
Identity = 90/140 (64.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query:   55 NEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            ++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE                                     ELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 SDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKE-------------------------------------ELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 105          
BLAST of Protein mago nashi homolog vs. Ensembl Human
Match: MAGOHB (mago homolog B, exon junction complex subunit [Source:HGNC Symbol;Acc:HGNC:25504])

HSP 1 Score: 160.614 bits (405), Expect = 6.525e-51
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1
Query:  181 MIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    1 MIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 98          
BLAST of Protein mago nashi homolog vs. Ensembl Human
Match: MAGOHB (mago homolog B, exon junction complex subunit [Source:HGNC Symbol;Acc:HGNC:25504])

HSP 1 Score: 146.362 bits (368), Expect = 1.797e-45
Identity = 64/85 (75.29%), Postives = 77/85 (90.59%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQ 306
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQ
Sbjct:    4 ASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQ 88          
BLAST of Protein mago nashi homolog vs. Ensembl Celegans
Match: mag-1 (Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029])

HSP 1 Score: 229.565 bits (584), Expect = 8.267e-78
Identity = 106/143 (74.13%), Postives = 123/143 (86.01%), Query Frame = 1
Query:   46 ERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            E++ +FY+RYYVGH GKFGHEFLEFEFRPNG LRYANNSNYKNDTMIRKE  V+ +VL ELK+I+E S+IM+EDD  WP PD++GRQELEI+  + HISFTT KIG+L D+N SKDP+GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    6 EKAADFYVRYYVGHKGKFGHEFLEFEFRPNGSLRYANNSNYKNDTMIRKEATVSESVLSELKRIIEDSEIMQEDDDNWPEPDKIGRQELEILYKNEHISFTTGKIGALADVNNSKDPDGLRSFYYLVQDLKCLVFSLIGLHFK 148          
BLAST of Protein mago nashi homolog vs. Ensembl Fly
Match: mago (gene:FBgn0002736 transcript:FBtr0071569)

HSP 1 Score: 236.498 bits (602), Expect = 1.269e-80
Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            + +FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE FV+ +V++ELK+I+  S+IM+EDD  WP PDRVGRQELEIV GD HISFTTSK GSL+D+N+SKDP GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TEDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. Ensembl Zebrafish
Match: magoh (mago homolog, exon junction complex subunit [Source:NCBI gene;Acc:100005893])

HSP 1 Score: 243.432 bits (620), Expect = 4.026e-83
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. Ensembl Zebrafish
Match: magoh (mago homolog, exon junction complex subunit [Source:NCBI gene;Acc:100005893])

HSP 1 Score: 243.432 bits (620), Expect = 4.026e-83
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. Ensembl Xenopus
Match: rbp4l (retinol binding protein 4, like [Source:Xenbase;Acc:XB-GENE-5839942])

HSP 1 Score: 242.276 bits (617), Expect = 1.504e-82
Identity = 112/141 (79.43%), Postives = 127/141 (90.07%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
             ++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    2 GSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 142          
BLAST of Protein mago nashi homolog vs. Ensembl Xenopus
Match: rbp4l (retinol binding protein 4, like [Source:Xenbase;Acc:XB-GENE-5839942])

HSP 1 Score: 190.66 bits (483), Expect = 2.115e-62
Identity = 89/113 (78.76%), Postives = 101/113 (89.38%), Query Frame = 1
Query:  136 GKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:   17 GKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 129          
BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Match: Magohb (mago homolog B, exon junction complex core component [Source:MGI Symbol;Acc:MGI:1913691])

HSP 1 Score: 242.276 bits (617), Expect = 9.674e-83
Identity = 112/141 (79.43%), Postives = 127/141 (90.07%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
             ++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 GSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Match: Magoh (mago homolog, exon junction complex core component [Source:MGI Symbol;Acc:MGI:1330312])

HSP 1 Score: 242.276 bits (617), Expect = 1.126e-82
Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 1
Query:   55 NEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            ++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 SDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 142          
BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Match: Magohb (mago homolog B, exon junction complex core component [Source:MGI Symbol;Acc:MGI:1913691])

HSP 1 Score: 160.614 bits (405), Expect = 4.479e-51
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1
Query:  181 MIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    1 MIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 98          
BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Match: Magohb (mago homolog B, exon junction complex core component [Source:MGI Symbol;Acc:MGI:1913691])

HSP 1 Score: 57.7658 bits (138), Expect = 1.333e-11
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 1
Query:   58 EFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMI 186
            +FYLRYYVGH GKFGHEFLEFEFRP+      + SN K D + 
Sbjct:    2 DFYLRYYVGHKGKFGHEFLEFEFRPDASRILKHFSNSKEDDVC 44          
BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Match: Magohb (mago homolog B, exon junction complex core component [Source:MGI Symbol;Acc:MGI:1913691])

HSP 1 Score: 57.7658 bits (138), Expect = 1.333e-11
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 1
Query:   58 EFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMI 186
            +FYLRYYVGH GKFGHEFLEFEFRP+      + SN K D + 
Sbjct:    2 DFYLRYYVGHKGKFGHEFLEFEFRPDASRILKHFSNSKEDDVC 44          
BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Match: sp|Q96A72|MGN2_HUMAN (Protein mago nashi homolog 2 OS=Homo sapiens OX=9606 GN=MAGOHB PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.118e-82
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 ASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Match: sp|Q0VC92|MGN2_BOVIN (Protein mago nashi homolog 2 OS=Bos taurus OX=9913 GN=MAGOHB PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.262e-82
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 ASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Match: sp|B9ENE7|MGN_SALSA (Protein mago nashi homolog OS=Salmo salar OX=8030 GN=magoh PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.039e-82
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Match: sp|Q566Y8|MGN_DANRE (Protein mago nashi homolog OS=Danio rerio OX=7955 GN=magoh PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.039e-82
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Match: sp|P50594|MGN_CHICK (Protein mago nashi homolog OS=Gallus gallus OX=9031 GN=MAGOH PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 3.279e-82
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    2 ASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 142          
BLAST of Protein mago nashi homolog vs. TrEMBL
Match: C1BRZ2 (Mago nashi OS=Lepeophtheirus salmonis OX=72036 GN=MGN PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 8.302e-83
Identity = 117/146 (80.14%), Postives = 130/146 (89.04%), Query Frame = 1
Query:   37 MSNERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            M N+  NEFYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE +V+++V+ ELK+I+E S+IM EDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+N SKDP+GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    1 MDNDSRNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHSSVMMELKRIIEDSEIMAEDDTLWPQPDRVGRQELEIVIGDEHISFTTSKIGSLVDVNSSKDPDGLRCFYYLVQDLKCLVFSLIGLHFK 146          
BLAST of Protein mago nashi homolog vs. TrEMBL
Match: V4A4P7 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_219308 PE=4 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 3.088e-82
Identity = 116/141 (82.27%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            S EFYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE FV+ +V++ELK+I+E S+IM+EDD LWP PDRVGRQELE+V GD HISFTTSKIGSL+D+NQSKDP GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 STEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHKSVMEELKRIIEDSEIMQEDDTLWPSPDRVGRQELEVVIGDEHISFTTSKIGSLVDVNQSKDPEGLRTFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. TrEMBL
Match: A0A0L8G3A7 (Uncharacterized protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22001733mg PE=4 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 3.334e-82
Identity = 115/141 (81.56%), Postives = 131/141 (92.91%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            S++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE +V+ +V++ELK+I+E S++M+EDD+LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL IFYYLVQDLKCLVFSLI LHFK
Sbjct:    4 SSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKSVMEELKRIIEDSEVMREDDELWPSPDRVGRQELEIVIGDEHISFTTSKIGSLVDVNQSKDPEGLRIFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. TrEMBL
Match: A0A2C9JWV3 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106071241 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 5.520e-82
Identity = 116/141 (82.27%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            S +FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE FV+ +V++ELK+I+E S+IM+EDD  WP PDRVGRQELEIV GD HISFTTSKIGSLLD+NQSKDP+GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 STDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHKSVMEELKRIIEDSEIMQEDDSAWPSPDRVGRQELEIVIGDEHISFTTSKIGSLLDVNQSKDPDGLRTFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. TrEMBL
Match: A0A3S1AZM7 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_016008 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 5.520e-82
Identity = 116/141 (82.27%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            S +FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKE FV+ +V++ELK+I+E S+IM+EDD  WP PDRVGRQELEIV GD HISFTTSKIGSLLD+NQSKDP+GL  FYYLVQDLKCLVFSLI LHFK
Sbjct:    4 STDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHKSVMEELKRIIEDSEIMQEDDSAWPSPDRVGRQELEIVIGDEHISFTTSKIGSLLDVNQSKDPDGLRTFYYLVQDLKCLVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. Ensembl Nematostella
Match: EDO46639 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RP78])

HSP 1 Score: 246.899 bits (629), Expect = 5.428e-85
Identity = 113/141 (80.14%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKNDTMIRKEV+ + AV++ELK+I++ S++MKEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+DINQ KDP GL  FYYLVQDLKC+VFSLI LHFK
Sbjct:    4 ADDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYCHKAVIEELKRIIDDSEVMKEDDALWPQPDRVGRQELEIVYGDQHISFTTSKIGSLVDINQCKDPEGLRCFYYLVQDLKCMVFSLIGLHFK 144          
BLAST of Protein mago nashi homolog vs. Ensembl Medaka
Match: magoh (protein mago nashi homolog [Source:NCBI gene;Acc:101167611])

HSP 1 Score: 243.432 bits (620), Expect = 3.391e-83
Identity = 112/141 (79.43%), Postives = 128/141 (90.78%), Query Frame = 1
Query:   52 SNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            +++FYLRYYVGH GKFGHEFLEFEFRP+GKLRYANNSNYKND MIRKE +V+ +V++ELK+I++ S+I KEDD LWP PDRVGRQELEIV GD HISFTTSKIGSL+D+NQSKDP GL +FYYLVQDLKCLVFSLI LHFK
Sbjct:    3 TSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFK 143          
BLAST of Protein mago nashi homolog vs. Planmine SMEST
Match: SMESG000049546.1 (SMESG000049546.1)

HSP 1 Score: 301.212 bits (770), Expect = 3.352e-106
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
Query:   37 MSNERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 474
            MSNERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK
Sbjct:    1 MSNERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMIRKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVHISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFK 146          
The following BLAST results are available for this feature:
BLAST of Protein mago nashi homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MAGOHB4.411e-8379.43mago homolog B, exon junction complex subunit [Sou... [more]
MAGOH1.641e-8280.00mago homolog, exon junction complex subunit [Sourc... [more]
MAGOH2.450e-5564.29mago homolog, exon junction complex subunit [Sourc... [more]
MAGOHB6.525e-5176.53mago homolog B, exon junction complex subunit [Sou... [more]
MAGOHB1.797e-4575.29mago homolog B, exon junction complex subunit [Sou... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mag-18.267e-7874.13Protein mago nashi homolog [Source:UniProtKB/Swis... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mago1.269e-8078.72gene:FBgn0002736 transcript:FBtr0071569[more]
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BLAST of Protein mago nashi homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
magoh4.026e-8379.43mago homolog, exon junction complex subunit [Sourc... [more]
magoh4.026e-8379.43mago homolog, exon junction complex subunit [Sourc... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rbp4l1.504e-8279.43retinol binding protein 4, like [Source:Xenbase;Ac... [more]
rbp4l2.115e-6278.76retinol binding protein 4, like [Source:Xenbase;Ac... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Magohb9.674e-8379.43mago homolog B, exon junction complex core compone... [more]
Magoh1.126e-8280.00mago homolog, exon junction complex core component... [more]
Magohb4.479e-5176.53mago homolog B, exon junction complex core compone... [more]
Magohb1.333e-1162.79mago homolog B, exon junction complex core compone... [more]
Magohb1.333e-1162.79mago homolog B, exon junction complex core compone... [more]
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BLAST of Protein mago nashi homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q96A72|MGN2_HUMAN2.118e-8279.43Protein mago nashi homolog 2 OS=Homo sapiens OX=96... [more]
sp|Q0VC92|MGN2_BOVIN2.262e-8279.43Protein mago nashi homolog 2 OS=Bos taurus OX=9913... [more]
sp|B9ENE7|MGN_SALSA3.039e-8279.43Protein mago nashi homolog OS=Salmo salar OX=8030 ... [more]
sp|Q566Y8|MGN_DANRE3.039e-8279.43Protein mago nashi homolog OS=Danio rerio OX=7955 ... [more]
sp|P50594|MGN_CHICK3.279e-8279.43Protein mago nashi homolog OS=Gallus gallus OX=903... [more]
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BLAST of Protein mago nashi homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
C1BRZ28.302e-8380.14Mago nashi OS=Lepeophtheirus salmonis OX=72036 GN=... [more]
V4A4P73.088e-8282.27Uncharacterized protein OS=Lottia gigantea OX=2251... [more]
A0A0L8G3A73.334e-8281.56Uncharacterized protein OS=Octopus bimaculoides OX... [more]
A0A2C9JWV35.520e-8282.27Uncharacterized protein OS=Biomphalaria glabrata O... [more]
A0A3S1AZM75.520e-8282.27Uncharacterized protein OS=Elysia chlorotica OX=18... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein mago nashi homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein mago nashi homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein mago nashi homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO466395.428e-8580.14Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Protein mago nashi homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
magoh3.391e-8379.43protein mago nashi homolog [Source:NCBI gene;Acc:1... [more]
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BLAST of Protein mago nashi homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000049546.13.352e-106100.00SMESG000049546.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30007066 ID=SMED30007066|Name=Protein mago nashi homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=560bp
TCTGTTTAAATAAACTTTTTATTTCAATTTTATAAAATGTCTAACGAAAG
ATCAAATGAGTTTTATCTACGTTATTATGTTGGCCACACAGGAAAATTTG
GTCATGAATTTTTAGAATTCGAATTTCGTCCTAATGGAAAGTTAAGATAC
GCTAATAATTCGAATTATAAAAATGATACCATGATTCGAAAAGAAGTTTT
TGTAAATACTGCTGTTTTAAAAGAACTCAAGAAAATTGTGGAAAGTAGTG
ATATAATGAAAGAGGATGATAAGCTATGGCCATTACCAGATCGAGTTGGT
CGACAAGAATTAGAAATTGTAAATGGCGACGTTCATATATCATTTACCAC
TTCTAAGATTGGATCACTGTTAGACATAAATCAGAGTAAAGATCCAAATG
GTTTAACAATTTTTTATTATTTGGTTCAAGATTTAAAGTGTTTGGTCTTT
TCATTGATTAGTCTTCATTTTAAGATTAAACCAATTTAATGTTATATTTG
AAATATAATTCTTCTTATTATTTTATCAACTTTTTATGTGCAGCTTTAAA
TAAATTGTAG
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protein sequence of SMED30007066-orf-1

>SMED30007066-orf-1 ID=SMED30007066-orf-1|Name=SMED30007066-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=151bp
MSNERSNEFYLRYYVGHTGKFGHEFLEFEFRPNGKLRYANNSNYKNDTMI
RKEVFVNTAVLKELKKIVESSDIMKEDDKLWPLPDRVGRQELEIVNGDVH
ISFTTSKIGSLLDINQSKDPNGLTIFYYLVQDLKCLVFSLISLHFKIKPI
*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0035145exon-exon junction complex
GO:0005634nucleus
GO:0005737cytoplasm
GO:0016607nuclear speck
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000103central nervous system
PLANA:0000204ovary
PLANA:0000208testis
Vocabulary: INTERPRO
TermDefinition
IPR036605Mago_nashi_sf
IPR004023Mago_nashi
Vocabulary: biological process
TermDefinition
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381regulation of alternative mRNA splicing, via spliceosome
GO:0006397mRNA processing
GO:0006417regulation of translation
GO:0006810transport
GO:0008380RNA splicing
GO:0051028mRNA transport
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004023Mago nashi proteinPFAMPF02792Mago_nashicoord: 9..150
e-value: 1.3E-75
score: 252.3
IPR004023Mago nashi proteinPANTHERPTHR12638FAMILY NOT NAMEDcoord: 5..150
IPR004023Mago nashi proteinCDDcd11295Mago_nashicoord: 8..150
e-value: 1.92825E-107
score: 300.332
IPR036605Mago nashi superfamilyGENE3DG3DSA:3.30.1560.10coord: 4..150
e-value: 3.3E-79
score: 265.8
IPR036605Mago nashi superfamilySUPERFAMILYSSF89817Mago nashi proteincoord: 7..150
NoneNo IPR availablePANTHERPTHR12638:SF4coord: 5..150