DNA_pol_B_2 domain-containing protein

Overview
NameDNA_pol_B_2 domain-containing protein
Smed IDSMED30007047
Length (bp)4594
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of DNA_pol_B_2 domain-containing protein (SMED30007047) t-SNE clustered cells

Violin plots show distribution of expression levels for DNA_pol_B_2 domain-containing protein (SMED30007047) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of DNA_pol_B_2 domain-containing protein (SMED30007047) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for DNA_pol_B_2 domain-containing protein (SMED30007047) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30007047

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 12

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pigment cellSMED30007047 SmedASXL_018086SmedAsxl_ww_GCZZ01PMID:29158443
He et al., 2017		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
neoblastSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30007047SMESG000063380.1 SMESG000001725.1 dd_Smed_v4_6535_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007047SMESG000061394.1 Contig37768newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007047SMESG000061394.1 Contig37768uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
GABAergic neuronSMED30007047SMESG000038917.1 SMESG000001725.1 SMESG000063380.1 dd_Smed_v6_6535_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Match: ZC53.4 (pep chromosome:WBcel235:X:1925750:1937689:1 gene:WBGene00022511.1 transcript:ZC53.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZC53.4)

HSP 1 Score: 83.9593 bits (206), Expect = 8.382e-16
Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 3 
Query: 3198 CV--MDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAK 3659
            C+  +DL+YP+EIH +    P C   +KI            NH      +KL  T  D + YVI  + L   L+  + L+K+H  + +++S WL  YIE N   R   K   N F   FYKL+NN+ +GKT++NVR R  + +V++ +++K +A+K
Sbjct: 1262 CIFEVDLEYPKEIHSRHNDSPLCPENVKI-----------DNH----VIKKLCNTLFDREKYVIHYENLLQCLQLGLKLKKIHRIITFKESNWLASYIEMNTNPRKNAK---NDFEKDFYKLMNNSVFGKTMENVRERVDVRLVTDEDKIKKLASK 1399

HSP 2 Score: 69.707 bits (169), Expect = 1.756e-11
Identity = 63/203 (31.03%), Postives = 90/203 (44.33%), Query Frame = 3 
Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFS---FCHYCKNILAEEDYK---VMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAA----NVSNI----ITSTNEKYISFIFGSMRLDSYRMVPCALDYLAVLLKPEDCKIFNKYNKY-YNFLAPKGIYPNEYI-SGKNFD 2651
            Y G +A ++F + I  +S E   L      + + K  Q++++ F+    C +C+     ED K   V DHD       YRG    SCN+  RKNNF+P++FHN  GYD+HLI   L +    N   I    I+S  EK+ISF                                  YN + +  +  KG+YP EY+ S K FD
Sbjct:  930 YIGYNATLEFNKYIIKISQEIMSLPS----VRMKKLTQDEWTEFNKNQECPHCQVQYNTEDMKTTKVRDHDH--WTGEYRGPFCGSCNILRRKNNFIPVFFHNLKGYDSHLIVGCLESTKYLNEHEIEIEKISSNTEKFISF---------------------------------SYNPHQFQLMRKKGVYPYEYMDSFKRFD 1093
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Match: H12I13.3 (pep chromosome:WBcel235:II:6071386:6073251:-1 gene:WBGene00019192.1 transcript:H12I13.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H12I13.3)

HSP 1 Score: 71.633 bits (174), Expect = 2.771e-12
Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = 3 
Query: 3390 QCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSR-G*KYSQRIVESSCAIKFDKINYIGFVIL*LSKLVM*K---FINDILYKMYGHNLKIHFEDTDSIIPE 3863
            + L   L + + L+K+H  L +++S W+K YI  N   R + K   N F   F+KL+NN+ +GKT++N+RNR +I +V++ +     A KL+ +   K S  I E   +++  K           +KLV  K   F  D++ K YG  +K+ ++DTDS+I E
Sbjct:  290 KALIQALNHGLKLKKIHRILTFKESAWMKKYIMLNTNLRKQAK---NDFEKDFFKLMNNSVFGKTMENIRNRVNIRLVTDDDS----ALKLIRKPNFKNSTIITEDLLSVELTK-----------TKLVFDKPIYFHYDVMQKHYGDKIKLCYQDTDSLIYE 433
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A7RR56 (Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g232141 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.646e-59
Identity = 80/264 (30.30%), Postives = 131/264 (49.62%), Query Frame = 3 
Query: 2061 PQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF------------------IFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKY--NKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783
            P+L++ + +    ED    F E++ +   E ++  K   ++ +++E + +Y   + CH C   L E+  KV+DH  C +   YRGAAHN+CNL+ R   F P+ FHN SGYD+HL    L  +   I  I +  EKYISF                  +   +R +DS++ +  +LD L   L  E  K    +   +    L  KG++P ++    NFD +      +L  K+  Y+ L  +DI ++DY++ QK+W+  K  T
Sbjct:  863 PKLVQ-RTVQGSAEDVAQLFVESLESDIKEIYNKFKFPKEVEMTREDEMNYDNATHCHICGGELGED--KVLDH--CHLTGKYRGAAHNACNLRFRAPKFFPVLFHNLSGYDSHLFVKNLGTSEGKINCIPNNEEKYISFTKQVVVDRFTNKEGKQVDVKRDIRFIDSFKFMSASLDSLVKNLPRESFKNLTIHYKGEQLQLLLRKGVFPYDWFC--NFDQL---DAIQLPPKEAFYSTLNDTDISEEDYQHAQKVWETFKMST 1116

HSP 2 Score: 102.064 bits (253), Expect = 9.646e-59
Identity = 94/325 (28.92%), Postives = 144/325 (44.31%), Query Frame = 3 
Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV--ESSCAIK-------FDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII-----------------------------PEKIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMY 3968
            AM +  PT   ++  D++  +   HP   V  +D+ YP  +H     +P     +KI            N  G     KLI    D   YV+  + L       + + KVH  + +++S WLK YI+ N   R +     N F   F+KL+NN+ +GKT++N+RNR  I +++N ++    A KL+S+   Y  R +  E+  AI        F+K  Y+G  IL LSK +M  F    +   YG   K+ F DTDS++                             P  I+  +     G F +E G G +I EF GL+AK+Y
Sbjct: 1232 AMSKPLPTHGFRWMTDQELKEWGRHPC--VVEVDMAYPRHLHDSHDDYPLAPESIKI------------NKVG-----KLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKAT---NDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQ----ARKLISKP-NYKHRTIFCENLAAIHMRKTRLVFNKPVYLGMCILDLSKNLMYDFHYGYVKPKYGDKAKLLFTDTDSLMYEIETEDFYKDISGDVRSMFDTSNYPRNHPSGIESGLNKKIIGMFKDETG-GLQITEFVGLRAKLY 1528

HSP 3 Score: 62.3882 bits (150), Expect = 9.646e-59
Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 2 
Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLY--------------YFDANSLF 3100
            ++Y   YL  DV  LADVF+ F ++C EN+ +D  + Y   G  WD+ +K    E  +L     D LL+ EEG+RGG S      ++    S  N+ Y              Y DAN+L+
Sbjct: 1118 RDYHDLYLESDVLLLADVFENFRDVCLENYGLDPAWYYTAPGLAWDAALKITRVELELL--TDCDMLLMFEEGIRGGVS------MISTRHSKANNPYMREYDPNLPTKYITYLDANNLY 1229

HSP 4 Score: 30.0314 bits (66), Expect = 9.646e-59
Identity = 21/58 (36.21%), Postives = 30/58 (51.72%), Query Frame = 2 
Query: 4052 LGYEDTKVCFKRFKQEGVGAWM--IRSVLHKILFSFHIRKGLNNYDDKRCILSDGIIT 4219
            +G++D K C   F +E     M  IRS  H +      ++ L++ DDKR I  DGI T
Sbjct: 1553 IGFDDYKDCL--FGKEPQMRMMNVIRSHGHNVYTETVNKRALSHEDDKRIICDDGIHT 1608
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A151IKB4 (DNA_pol_B_2 domain-containing protein OS=Cyphomyrmex costatus OX=456900 GN=ALC62_04349 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.063e-56
Identity = 94/337 (27.89%), Postives = 154/337 (45.70%), Query Frame = 3 
Query: 3108 AMIETFPTFEMKFCKDKKYVK*----LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDS------------IIPEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFL---NKKDLAK 3995
            AM +  P  + ++  D +        L+ P  Y+  +D++YP+ +H      P+C  R K P                   +KL+ T  D + YVI  + L     + + + K+H  L + +S WL+ YIE N K R   K   N F    YKL+NNA +GKT++NVR+R  +++V+  E  +  A  ++++   +S+ +   +          +KFDK  Y+G  IL +SK  + +F ++ +  ++    KI + DTDS            II   ID++              + N K    M++   G  + EF GL+AKMY L    KKD  K
Sbjct:  810 AMCQPLPYADFRWVDDVQNFDFSTIPLDSPTGYILEVDIEYPQHLHDAHTDLPFCPTREKPPGK---------------RDDKLLATLCDKQRYVIHYRNLQQCTRHGLSIAKIHRILQFTQSPWLRDYIELNTKFRTLAK---NDFEKNLYKLMNNAVFGKTMENVRDRVDVKLVTKWEG-RYGAEAMIAKPNFHSRSVFSENLVAIELRKLEVKFDKPIYVGMCILDISKTCLYEFHHEYMAPLFHDKCKIMYTDTDSLIYHVECDDVYEIIKRDIDRFDTSDYSIDNPYSIPLANKKVPGLMKDENNGAIMTEFVGLRAKMYALRVQGKKDTKK 1127

HSP 2 Score: 98.9821 bits (245), Expect = 5.063e-56
Identity = 65/243 (26.75%), Postives = 115/243 (47.33%), Query Frame = 3 
Query: 2118 FAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVS---NIITSTNEKYISFI------------FGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNK-----YNKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783
            FA+ + NL+     ++ T   ++ +++  E ++  + CH C+   A++D +  DH  C +   YRG AH++CNL  + +  +P+ FHN +GYD H I   +A       +++  T EKY SF                +R +DSYR +  +LD LA  L  +  ++  +       + +N L  KG++P EYI     D  E+  +  L  +   Y+ L    + + DY +   +W     +T
Sbjct:  459 FADELKNLAHSVQSIISTNVPMDFTRDDCEKFNSATHCHVCEKPFAKDDKRARDH--CHLTGRYRGPAHSNCNLNYKDSRCIPVVFHNLTGYDAHFIIKEIATAYEGHVDLLPITKEKYTSFTKHVDDTIDDKKNCIQLRFIDSYRFLASSLDKLASFLNKDKLRVLRREFSHLSEENFNLLTRKGVFPYEYI-----DCSEKLNESCLPPRDSFYSSLTDDTVSESDYAHAVNVWQRFSIQT 694

HSP 3 Score: 57.7658 bits (138), Expect = 5.063e-56
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 2 
Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS 3019
            EY+  YL  DV  LADVF+ F + C  ++ +D  Y Y L GFTWD+ +K    +  +L     D ++ +E G+RGG S
Sbjct:  697 EYSDLYLKTDVLLLADVFENFRDSCVASYGLDPAYYYTLPGFTWDAMLKHTGVKFELL--TDIDMVMFVERGIRGGLS 772
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A2L2YHS0 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.827e-56
Identity = 78/242 (32.23%), Postives = 126/242 (52.07%), Query Frame = 3 
Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDI-NLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF---IFGSMRL---DSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYN-----FLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLK 2774
            Y G+DA   F E +   +   H+       + +L+++  + Y   + C+ C +  + E+YKV DH  C +   +RGA+ N+CN++ +  NF+P+ FHN SGYD+HL    L  N  NI  I    EKYISF   + G + L   DSYR +  +LD LA  L P+    F   NK+++      +  KG+YP +YI     D+  +  +  L  ++  Y+ L    I  +DYK+ +++W + K
Sbjct:  371 YRGKDAAKIFMEKMREEALIIHEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDH--CHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEENINVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLTPDQ---FLNMNKFFSSSEVPLVLRKGVYPYDYI-----DHESKFEETTLPPQRAFYSKLNDCSISNEDYKHAEEVWQIFK 602

HSP 2 Score: 103.219 bits (256), Expect = 5.827e-56
Identity = 88/302 (29.14%), Postives = 141/302 (46.69%), Query Frame = 3 
Query: 3183 PIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII------------PEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKD 3986
            P+ ++  +DL YP+ +H      P      KIP   K K              +L+ T    + YV+  + L + L+  +IL KVH  L + +S WLK YI+ N   R   K   N+F   F+KL+NNA +GKT++N+RNR ++++ S+ ++    A KL+SR     + I+             I F+K   IG  +L +SK++M KF    +   Y   +K+ + DTDS I             E +D +                N K    M++  KG+ ++EF GL++KMY    K+
Sbjct:  748 PLGFIFEVDLDYPKNLHDNHSDLPLA-PETKIPPGCKDK--------------RLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLR---KDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKK----AEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHYTKMKTKYEEKIKLLYTDTDSFIYDITTEDVYSDMNEDLDSFDTSDYPEDNIYGTPRKNKKVLGVMKDENKGEIMIEFIGLRSKMYAFKVKE 1027

HSP 3 Score: 58.9214 bits (141), Expect = 5.827e-56
Identity = 36/113 (31.86%), Postives = 62/113 (54.87%), Query Frame = 2 
Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS------GVLGSRLV*VGESVGNSLY--YFDANSLF 3100
            EY+  Y+  DV  LADVF+ F ++C  ++++D  + +   G +WD+ +K  +    +L    +D +L IE G+RGG S      G   ++ +   +S  +S Y  Y DAN+L+
Sbjct:  608 EYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELL--TDYDMILFIESGIRGGISQCSHRYGSANNKYMEAYDSSKSSNYLLYLDANNLY 718
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A2L2YHT1 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.361e-55
Identity = 78/242 (32.23%), Postives = 126/242 (52.07%), Query Frame = 3 
Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDI-NLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF---IFGSMRL---DSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYN-----FLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLK 2774
            Y G+DA   F E +   +   H+       + +L+++  + Y   + C+ C +  + E+YKV DH  C +   +RGA+ N+CN++ +  NF+P+ FHN SGYD+HL    L  N  NI  I    EKYISF   + G + L   DSYR +  +LD LA  L P+    F   NK+++      +  KG+YP +YI     D+  +  +  L  ++  Y+ L    I  +DYK+ +++W + K
Sbjct:  371 YRGKDAAKIFMEKMREEALIIHEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDH--CHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEENINVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLTPDQ---FLNMNKFFSSSEVPLVLRKGVYPYDYI-----DHESKFEETTLPPQRAFYSKLNDCSISNEDYKHAEEVWQIFK 602

HSP 2 Score: 103.219 bits (256), Expect = 1.361e-55
Identity = 88/302 (29.14%), Postives = 141/302 (46.69%), Query Frame = 3 
Query: 3183 PIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII------------PEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKD 3986
            P+ ++  +DL YP+ +H      P      KIP   K K              +L+ T    + YV+  + L + L+  +IL KVH  L + +S WLK YI+ N   R   K   N+F   F+KL+NNA +GKT++N+RNR ++++ S+ ++    A KL+SR     + I+             I F+K   IG  +L +SK++M KF    +   Y   +K+ + DTDS I             E +D +                N K    M++  KG+ ++EF GL++KMY    K+
Sbjct:  749 PLGFIFEVDLDYPKNLHDNHSDLPLA-PETKIPPGCKDK--------------RLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLR---KDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKK----AEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHYTKMKTKYEEKIKLLYTDTDSFIYDITTEDVYSDMNEDLDSFDTSDYPEDNIYGTPRKNKKVLGVMKDENKGEIMIEFIGLRSKMYAFKVKE 1028

HSP 3 Score: 57.7658 bits (138), Expect = 1.361e-55
Identity = 35/114 (30.70%), Postives = 59/114 (51.75%), Query Frame = 2 
Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS------GVLGSRLV*V---GESVGNSLYYFDANSLF 3100
            EY+  Y+  DV  LADVF+ F ++C  ++++D  + +   G +WD+ +K  +    +L    +D +L IE G+RGG S      G   ++ +          N L Y DAN+L+
Sbjct:  608 EYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELL--TDYDMILFIESGIRGGISQCSHRYGSANNKYMEASYDSSKPSNYLLYLDANNLY 719
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A4Y2QVZ0 (Uncharacterized protein OS=Araneus ventricosus OX=182803 GN=AVEN_149573_1 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.454e-54
Identity = 104/331 (31.42%), Postives = 167/331 (50.45%), Query Frame = 3 
Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHP----IKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKES----NHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV---------ESSCAIKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSI--IPEKIDKY-----------I*NFKFGYFM------EEMGKGKKIL------EFCGLKAKMYFL 3974
            AM +  PT +  + ++   V  LN P    + Y+  +DL+YP E+H     +P    ++ +  S  S + KE     N      +EKLI    + + YV+  + L + ++  + + KVH  L +++S WLK YI+FN  +R   K   + F    +KLLNNA +GKT++N+RNR +I++V++    + IA KLV+    +S  I+         E +C    ++  Y+GF IL +SK++M  F  + + K YG+  K+ F DTDS+  I   +D Y             N+   +F+      + +GK K  L      EF GLKAKMY L
Sbjct:  843 AMSQNLPTHDFSWTEEN--VDYLNIPDDSDVGYILEVDLEYPSELHHLHNCYPLAPEKVLVSPSEYSDYTKELLYKLNLSKSKPSEKLIPNLRNKEKYVVHYRNLKFYVQLGLKVTKVHRILKFKQSAWLKNYIDFNTDQR---KRATSNFEKDLFKLLNNAVFGKTMENLRNRVNIDLVTD----EKIAKKLVASPAFHSFIIINNDLVSIQREKNCLF-LNRPIYVGFSILDISKILMFDFHYNYIKKKYGNRSKLLFTDTDSLCYIISTVDVYKDISEQLELFDTANYPENHFLFSPTNNKVLGKMKDELSDGIASEFVGLKAKMYSL 1163

HSP 2 Score: 93.5893 bits (231), Expect = 1.454e-54
Identity = 75/239 (31.38%), Postives = 115/239 (48.12%), Query Frame = 3 
Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDIN---LSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVS---NIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKY-YNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783
            Y GEDA I+F   + NL  E   +L     +     +   Q+++     C  C+  L E+  +V DHD   +   YRGAAHN+CNL  +    +P+  HN   YD HL+   +    +     I    EK+ISF FGS+R +DS++ +  +L+ L   LKPE  ++ N + K     +  KG YP +Y     FD   +  +  L  K   +N L    +   DY Y QK+W++   +T
Sbjct:  501 YRGEDAVIEF---LKNLIGEEEWILPKIRKVKPMVFTPVDQQNFQAAVNCWVCEKPLQED--RVRDHDH--LTGLYRGAAHNNCNLNFQIGTHIPVLMHNLKNYDLHLLMHGIGKFKNRKIQCIPQNTEKFISFSFGSLRFIDSFQFLNTSLEKLVKNLKPEQLRLCNNFFKANAELITRKGCYPYDY-----FDSFSKFNETSLPPKSAFFNSLTNEAVSDKDYGYAQKIWNIFNLQT 727

HSP 3 Score: 52.373 bits (124), Expect = 1.454e-54
Identity = 34/108 (31.48%), Postives = 51/108 (47.22%), Query Frame = 2 
Query: 2801 YLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGG-------FSGVLGSRLV*VGESVGNS-LYYFDANSLF 3100
            Y+  DV  LADVF+ F  +C   + ID C+ +   G  W + ++    E  +L     D  L IE+G+RGG       F+      L        NS + Y+DAN+L+
Sbjct:  735 YVTSDVLLLADVFENFRTLCLNYYKIDPCHMFTAPGLAWQACLRMTGVELELL--TDIDMHLFIEKGIRGGVAMISHRFASANNPYLPTYDPDTPNSYIMYWDANNLY 840

HSP 4 Score: 28.4906 bits (62), Expect = 1.454e-54
Identity = 17/66 (25.76%), Postives = 30/66 (45.45%), Query Frame = 2 
Query: 4046 IHLGYEDTKVCFKRFKQEGVGAWMIRSVLHKILFSFHIRKGLNN-------YDDKRCILSDGIITL 4222
            +H     +++    +K   + A   R+    I+ S H+   + N       +DDKR +L DG+ TL
Sbjct: 1176 VHKSVLKSRISHDDYKNCLLDAQRTRNSFKTIISSSHVLNTVQNTKISLCPFDDKRYVLHDGVSTL 1241
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000055500.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001032.1:12601:13692:-1 gene:ENSAMXG00000041341.1 transcript:ENSAMXT00000055500.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 53.1434 bits (126), Expect = 1.508e-6
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 2 
Query:  857 WSADLIETLN-PKNSENYRYILTIIDLYIRYVCAIQLLNKQSETMKEAFENLFESNPNRVPNKLYVDNGKEFYK*LFQEFIEENDI 1111
            W ADL++  N  K++++ +++LT ID+  +Y     L NK    + +AF ++ +    RVP KL  D GKEF+   FQ  +++++I
Sbjct:   76 WQADLVDMSNLSKDNKDMKFMLTCIDILSKYAWVRVLRNKTGVEVTDAFNSILKEG--RVPKKLQTDQGKEFFNKNFQGLMKKHNI 159
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO46109 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR56])

HSP 1 Score: 107.071 bits (266), Expect = 1.892e-62
Identity = 80/264 (30.30%), Postives = 131/264 (49.62%), Query Frame = 3 
Query: 2061 PQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF------------------IFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKY--NKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783
            P+L++ + +    ED    F E++ +   E ++  K   ++ +++E + +Y   + CH C   L E+  KV+DH  C +   YRGAAHN+CNL+ R   F P+ FHN SGYD+HL    L  +   I  I +  EKYISF                  +   +R +DS++ +  +LD L   L  E  K    +   +    L  KG++P ++    NFD +      +L  K+  Y+ L  +DI ++DY++ QK+W+  K  T
Sbjct:  863 PKLVQ-RTVQGSAEDVAQLFVESLESDIKEIYNKFKFPKEVEMTREDEMNYDNATHCHICGGELGED--KVLDH--CHLTGKYRGAAHNACNLRFRAPKFFPVLFHNLSGYDSHLFVKNLGTSEGKINCIPNNEEKYISFTKQVVVDRFTNKEGKQVDVKRDIRFIDSFKFMSASLDSLVKNLPRESFKNLTIHYKGEQLQLLLRKGVFPYDWFC--NFDQL---DAIQLPPKEAFYSTLNDTDISEEDYQHAQKVWETFKMST 1116

HSP 2 Score: 102.064 bits (253), Expect = 1.892e-62
Identity = 94/325 (28.92%), Postives = 144/325 (44.31%), Query Frame = 3 
Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV--ESSCAIK-------FDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII-----------------------------PEKIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMY 3968
            AM +  PT   ++  D++  +   HP   V  +D+ YP  +H     +P     +KI            N  G     KLI    D   YV+  + L       + + KVH  + +++S WLK YI+ N   R +     N F   F+KL+NN+ +GKT++N+RNR  I +++N ++    A KL+S+   Y  R +  E+  AI        F+K  Y+G  IL LSK +M  F    +   YG   K+ F DTDS++                             P  I+  +     G F +E G G +I EF GL+AK+Y
Sbjct: 1232 AMSKPLPTHGFRWMTDQELKEWGRHPC--VVEVDMAYPRHLHDSHDDYPLAPESIKI------------NKVG-----KLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKAT---NDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQ----ARKLISKP-NYKHRTIFCENLAAIHMRKTRLVFNKPVYLGMCILDLSKNLMYDFHYGYVKPKYGDKAKLLFTDTDSLMYEIETEDFYKDISGDVRSMFDTSNYPRNHPSGIESGLNKKIIGMFKDETG-GLQITEFVGLRAKLY 1528

HSP 3 Score: 62.3882 bits (150), Expect = 1.892e-62
Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 2 
Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLY--------------YFDANSLF 3100
            ++Y   YL  DV  LADVF+ F ++C EN+ +D  + Y   G  WD+ +K    E  +L     D LL+ EEG+RGG S      ++    S  N+ Y              Y DAN+L+
Sbjct: 1118 RDYHDLYLESDVLLLADVFENFRDVCLENYGLDPAWYYTAPGLAWDAALKITRVELELL--TDCDMLLMFEEGIRGGVS------MISTRHSKANNPYMREYDPNLPTKYITYLDANNLY 1229

HSP 4 Score: 30.0314 bits (66), Expect = 1.892e-62
Identity = 21/58 (36.21%), Postives = 30/58 (51.72%), Query Frame = 2 
Query: 4052 LGYEDTKVCFKRFKQEGVGAWM--IRSVLHKILFSFHIRKGLNNYDDKRCILSDGIIT 4219
            +G++D K C   F +E     M  IRS  H +      ++ L++ DDKR I  DGI T
Sbjct: 1553 IGFDDYKDCL--FGKEPQMRMMNVIRSHGHNVYTETVNKRALSHEDDKRIICDDGIHT 1608
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000080616.1 (SMESG000080616.1)

HSP 1 Score: 333.183 bits (853), Expect = 1.208e-101
Identity = 217/467 (46.47%), Postives = 277/467 (59.31%), Query Frame = 3 
Query: 2442 ITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNF-DYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKTRNIL*II*TWTFSHWRMFLKDSGIFVLKTSVLIIVIVIYSRDLLGTVE*NKWMVKLKYLRKKPLINYY**K-------KELEEGFQECLEVDLFKLVKV*VIPYTILMQTLCSVTAMIETFPTFEMKFCKDKKYVK*-LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFI 3788
            + ST+EKYISF  GS+R LDSY+M+P  L+YL  LLKP+D KIFNK+    N    KGIY  EYISGKNF D  ++  + +LL   + YNHLK++++ + DY + Q+                 +W    +   +++  I  L   V           LL  V  N   V L+     P   Y+          K  + GF   L   L  + +    P           TAM +  PT EMK CKD KYVK  LNH I Y+ ++DLKYP E+H KT YFP+C R++K+ E   S+WQKE+N   Y TTE LIQ+Q+D+K YVIE +CLDW LEN ++L+KVH+K+MY KSYWLKPYI+FNIKKR E+K +GNKFG  FYKLLNNAFYGKTL+NVRNR SIEIVS  E+LK+IAAK   +      +I    CA        IKF+K NY GFV+L LSKL M KFI
Sbjct:    1 MQSTDEKYISFSVGSLRFLDSYKMMPLPLEYLESLLKPKDLKIFNKFYLQLNLNIRKGIYLYEYISGKNFEDTKQKLSESQLLEISKFYNHLKMTELNEKDYLFGQE-----------------SWHLLEYGRNMEEYTIHYLNMEVF----------LLADVFENFRNVCLENFGIDPCYCYFLSGLTWVSGMKVTQRGFSGVLGDRLVVVHEKERYPLYYFDANSLYPTAMTDELPTGEMKLCKDSKYVKTILNHLIGYIYIVDLKYPVELHDKTEYFPFCPRKVKVQEESLSQWQKENNPLNYKTTEILIQSQDDLKEYVIEGRCLDWYLENGIVLKKVHKKIMYNKSYWLKPYIKFNIKKRTESKQQGNKFGDVFYKLLNNAFYGKTLENVRNRKSIEIVSTKEKLKSIAAKAGYQ----RMKIFSEECAAVHFNKNTIKFEKFNYTGFVLLELSKLYMYKFI 436

HSP 2 Score: 105.145 bits (261), Expect = 2.778e-23
Identity = 56/109 (51.38%), Postives = 65/109 (59.63%), Query Frame = 2 
Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLYYFDANSLFCNS 3109
            +EYT++YLNM+VF LADVF+ F N+C ENF ID CYCY LSG TW SGMK                        + GFSGVLG RLV V E     LYYFDANSL+  +
Sbjct:  119 EEYTIHYLNMEVFLLADVFENFRNVCLENFGIDPCYCYFLSGLTWVSGMK----------------------VTQRGFSGVLGDRLVVVHEKERYPLYYFDANSLYPTA 205
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000015240.1 (SMESG000015240.1)

HSP 1 Score: 302.368 bits (773), Expect = 6.198e-89
Identity = 182/369 (49.32%), Postives = 233/369 (63.14%), Query Frame = 3 
Query: 1599 FPNRFEWNKKFCKQNPSI-KTNVFAIN-NKKLGIIYKDHLDYK*CNLLLYKDHYVLCKNVLVFLGNSKSEI--ICNV*IAS--PPSRLRMH*KPSRNYAFKMRKELQRSIEISIMNSKISNSRIRLHSIV---IESWNKIENDGD-----IASEQKEFFYSMYIKSNYPQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDIN-LSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNFDYV 2657
            FP      +KF +QN +I K NVF IN NKKLGI+Y+DHLD K CNLLLYKDHYVLCKN  VFL NSK ++  +C    AS    + L+ H    + +  +  + +     +     +  N + ++  +     E+WNK+  D       I SEQK F +S+Y+KSNYP L++D+ I Y GEDA   FAETIN+LS E    LKT Y I+ LS E   +Y     C YC       + KVMDHD  L  +NYRGAAHN CNLKAR NNF+P+YFHNGSGYDNHL+FLPLA N++ II ST+EKYISF  G +R LDS++ +P +L+YLA LL+PE  K FNK+   +N    KGIY  EYISGKN+  +
Sbjct:  199 FPIHLNGIQKFARQNYTIVKINVFTINDNKKLGILYRDHLDPKGCNLLLYKDHYVLCKNFGVFLKNSKVDVSFLCLNCFASFTVENALKKH----QQFCVEHEEGIASFPHVPYHEFQNYNYKNKVPFVCYSDFEAWNKVAGDTLDRNDLIRSEQKGFCFSIYLKSNYPLLVEDRNIVYEGEDATTAFAETINSLSEELKPKLKTNYIISELSDEQLNEYRNEVICFYCGKEFTPTNDKVMDHDHYLEKNNYRGAAHNDCNLKARTNNFIPLYFHNGSGYDNHLVFLPLAPNITKIIPSTDEKYISFTVGCIRFLDSFKTMPLSLEYLASLLEPEHLKTFNKFYPQFNLKIRKGIYNYEYISGKNYTEI 563

HSP 2 Score: 77.7962 bits (190), Expect = 3.530e-14
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 2 
Query: 1814 CLNCFASFKVENALKTQQKLCVQNEEGVATFHRDKYHEFKNFQFKNKAPFYCY 1972
            CLNCFASF VENALK  Q+ CV++EEG+A+F    YHEF+N+ +KNK PF CY
Sbjct:  273 CLNCFASFTVENALKKHQQFCVEHEEGIASFPHVPYHEFQNYNYKNKVPFVCY 325
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022089.1 (SMESG000022089.1)

HSP 1 Score: 220.705 bits (561), Expect = 3.407e-72
Identity = 125/210 (59.52%), Postives = 157/210 (74.76%), Query Frame = 3 
Query: 3396 LDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*K-YSQRIVESS---CAIKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSIIPE--------KIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKDL 3989
            LDW LE  MILEKVH+KL+Y+K  WLKPYI+FNIKKR E+KA GNKFG FFYKL+N++FYGKTL+NVR+   IEI+S  ER KT+A+K+  +  K +S+    +    C+IKF+K NYIGFVIL LSKLVM +FI ++LYK YG+N +IHF DTDSII E        KI ++I + K GYF +EMG  KKIL+FCGLK+K  FL+ KDL
Sbjct:    2 LDWYLELGMILEKVHKKLIYRKFKWLKPYIDFNIKKRLESKAIGNKFGDFFYKLMNHSFYGKTLENVRDSQEIEIISCKERFKTVASKVGLQSFKIFSEDCAAAHFKKCSIKFNKFNYIGFVILELSKLVMNRFIYNVLYKTYGNNFRIHFGDTDSIILELVKHQRIDKIHEHIHDTKLGYFKDEMGPNKKILDFCGLKSKENFLDIKDL 211

HSP 2 Score: 73.1738 bits (178), Expect = 3.407e-72
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 2 
Query: 4010 H*RVKRYTKPSIIHLGYEDTKVCFKRFKQEGVGAWMIRSVLHKILFSFHIRKGLNNYDDKRCILSDGIITLLY 4228
            H RVK Y+KPSI +LGYE+ K C    +Q+ VG W ++S  HK+    + R G++NYDDKR ILS+GI +L Y
Sbjct:  219 HKRVKGYSKPSIKNLGYEEAKECLLFKEQQEVGGWKLKSNHHKMYIQEYSRVGIHNYDDKRYILSNGISSLPY 291
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000075540.1 (SMESG000075540.1)

HSP 1 Score: 214.927 bits (546), Expect = 4.620e-71
Identity = 129/283 (45.58%), Postives = 184/283 (65.02%), Query Frame = 3 
Query: 1941 NSRIRLHSIVIESWNKIENDGDIASEQKEFFYSMYIKSNYPQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNN-FVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNFDYVXXXX-XXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCK 2780
            + ++ L ++  E+WNK+E   D   EQK F +S+Y+KSNY  L++DQ I Y GEDA   FAE INNL+ E   +LKT + ++ ++    +Y     C YC       + ++++  +C+           +C L+ + NN FVP YFHNG+GYDNHLIFLPLA N++ I+ ST+EKYISF    +R LDSY+M+P +LDYL+ LLKPED KIFNK+   +N    KGIYP EYISGKN+  VE+K+ + +L + +  YNHL++ ++ + DY Y  + WDLLKCK
Sbjct:  412 SQKLVLENVDFEAWNKLEEYNDTKGEQKGFCFSIYLKSNYLNLLEDQHIVYRGEDATTKFAEIINNLTEELKIILKTNFVLDANEAQLNEYRNCKTCFYC-------NKELLNDKRCI-----------TCRLQFKANNIFVPFYFHNGTGYDNHLIFLPLAPNITKILPSTDEKYISFSVDCIRFLDSYKMMPLSLDYLSSLLKPEDLKIFNKFYPRFNGKVRKGIYPYEYISGKNYKNVEQKLFEPELPSIQFFYNHLEMDELSEKDYLYAHESWDLLKCK 676

HSP 2 Score: 75.0998 bits (183), Expect = 4.620e-71
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 
Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKT 2971
            +EYTM+YLNMDVF LA VF+ F N+C ENF ID  YC+ LSG TW SGMK    +    KKKT
Sbjct:  679 EEYTMHYLNMDVFLLAYVFENFRNVCLENFGIDPSYCFSLSGLTWVSGMKFTQVKLKHFKKKT 741

HSP 3 Score: 72.7886 bits (177), Expect = 8.946e-20
Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:  511 PGNRLDIRLNENDNPKSGEEPINRADAVVLKHDIAYRQEDIR 636
            PG R+DIRL ENDNPK G+EPINR D   LKHDIAYRQEDIR
Sbjct:   20 PGTRVDIRLGENDNPKPGKEPINRVDEAALKHDIAYRQEDIR 61

HSP 4 Score: 45.0542 bits (105), Expect = 8.946e-20
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 2 
Query:  641 KADIDLIQDLNEIEDPTF*ERFSRAISKG 727
            KADIDLIQDLNEI+  TF ERF RAI+K 
Sbjct:   65 KADIDLIQDLNEIQSSTFGERFLRAIAKA 93
[Close]
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000052330.1 (SMESG000052330.1)

HSP 1 Score: 221.09 bits (562), Expect = 1.848e-64
Identity = 106/166 (63.86%), Postives = 130/166 (78.31%), Query Frame = 3 
Query: 2070 MKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCK 2564
            MK   + Y+GE   + FAETINNLS +F ++LKTEY I++SKE +E+Y++ S C+YC+    EEDYKVMDHD  L   NYRG AHN CNLKA+K NFVPIYFHNGSG DNHLIFL LA NV+ II ST+E+YISF  G+MR LDSYR++P +LDYLA LLKPE+C+
Sbjct:    1 MKSHYVEYFGEHEALHFAETINNLSVKFKNILKTEYSIDVSKEQREEYNKSSCCYYCEKKFTEEDYKVMDHDHYLFEKNYRGTAHNRCNLKAKKINFVPIYFHNGSGCDNHLIFLALAPNVTKIIPSTDERYISFSVGTMRFLDSYRLMPLSLDYLASLLKPEECE 166

HSP 2 Score: 106.686 bits (265), Expect = 5.597e-25
Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 3 
Query: 3177 NHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEK 3446
            N P  +V  +DLKYP+ +H KT+YFP C  ++ +PE WKS+W++E+N  GY TTEKLIQTQ + KN ++E + L+W LE  M+LE+VH+K
Sbjct:  187 NSPEGFVYEVDLKYPQSLHDKTKYFPCCPEKLTVPEEWKSEWKQENNLGGYKTTEKLIQTQGNKKNDIVEGRMLNWYLELGMVLERVHKK 276
The following BLAST results are available for this feature:
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ZC53.48.382e-1634.62pep chromosome:WBcel235:X:1925750:1937689:1 gene:W... [more]
H12I13.32.771e-1233.33pep chromosome:WBcel235:II:6071386:6073251:-1 gene... [more]
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A7RR569.646e-5930.30Predicted protein OS=Nematostella vectensis OX=453... [more]
A0A151IKB45.063e-5627.89DNA_pol_B_2 domain-containing protein OS=Cyphomyrm... [more]
A0A2L2YHS05.827e-5632.23Uncharacterized protein (Fragment) OS=Parasteatoda... [more]
A0A2L2YHT11.361e-5532.23Uncharacterized protein (Fragment) OS=Parasteatoda... [more]
A0A4Y2QVZ01.454e-5431.42Uncharacterized protein OS=Araneus ventricosus OX=... [more]
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSAMXT00000055500.11.508e-633.72pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO461091.892e-6230.30Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000080616.11.208e-10146.47SMESG000080616.1[more]
SMESG000015240.16.198e-8949.32SMESG000015240.1[more]
SMESG000022089.13.407e-7259.52SMESG000022089.1[more]
SMESG000075540.14.620e-7145.58SMESG000075540.1[more]
SMESG000052330.11.848e-6463.86SMESG000052330.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30007047 ID=SMED30007047|Name=DNA_pol_B_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=4594bp
CTGAGGTTTTGGCTATTTCATGTCTTGAATACCTGTCTTGTTTGAAGGGT
TCGAATGTTTTGAATGCTCTGAGTGCTCTGAGTGCTCCGAGGATTATTGT
GCACCGAGTTATTATTTTTTATAAGTGGCTTTGAATATGTGGTGGTCGCG
GAGGGTTTTGTGCTCGCGGAGCTTGAGAAACGTTCTGGGAAAGGGTGAAT
GCCGAGCCAATTGTGAAGGATGATAGAGGGGTAAATTGGATCATTGGAGA
AATTTTTATATTAAAAATCAAATAAAGTAAATCAAACTTATTGTAAATTG
TGTAATATATATATGCATAAGAATTATAATTATCGGCATGTTAAAACCAA
CAAACATTTGAAAAAACGAGGAAAGGATATACGACGAGAAGTAAGAGATA
TACAAAAGAAGTTCGGAGGGGATTTACAACAATTAAATTATAAATTACCT
GATTTCCCATGGTCGAAATAGCCTGGAGAACATCATCTTTCAAAATTTCA
ATATCTCGGTCCAGGAAATAGGCTTGATATTCGTCTTAATGAAAACGATA
ATCCAAAATCCGGAGAAGAACCAATAAATAGAGCTGACGCAGTGGTCTTG
AAGCATGATATTGCATATCGACAAGAAGATATTAGATAGCAAAGCAGATA
TTGATTTGATTCAAGATTTAAATGAAATTGAAGACCCAACTTTTTGAGAA
AGATTTTCAAGAGCTATTTCAAAAGGAGCAATGAAAGCTAAGATTGTGTT
AGGTGTTGTATTGGAAAATCAAACTACTCTCACAAATAAAACTGCTCTTG
CGAATGAACTACATAAAGAATATTAAAATTTAAAAAAATATTTAAAAGTC
AAAGTTTGGTCGGCTGATTTAATTGAAACTTTAAATCCAAAAAATAGTGA
AAATTATAGATATATCTTGACTATTATCGATTTATACATTAGATATGTTT
GTGCTATTCAGTTACTAAATAAACAAAGTGAAACAATGAAAGAGGCTTTC
GAAAATTTATTTGAATCAAATCCGAATAGAGTCCCTAATAAATTATACGT
TGATAATGGTAAGGAATTCTACAAATAATTATTCCAAGAGTTTATAGAGG
AAAATGATATTAAAATCTATTCAAAATTCAATCAACTAGATGAAAGAACT
CAACAAAAAAAGACGCCAACAACAACAACGGCGGAAAAAACAGAAGCAAC
GGGAAGAACAGAATATATATTCTCATTATGCAACTCTGCGGGTGTTCTAT
ACAACCCCAGCTTCTGTGATTGTAAAGAAAGATCAAATCCCCGATGAATT
ATAGTATGAATCCATGGTATCGTTCTTGGAAAGTAAAATATATAATGGGT
GGTGGCTGGGTGTTTGAAAAGATCTTGAATACTTGTTTAACCTTCTGCCA
TTTTAAATCTCCTCTAGAAGGGACTTGTATTCCTATTCCGTTCAAGTCGA
ACGTTATTCTTATAATTCAGAATAAGGATAACAGATGTTTCGTGTATAGT
GTCCTAGCATATTTGCATCCGGTGGTTACTACCGAGCATGCTTATTGATG
CAAACAATATACGAAATACGACCATGAATTGAATCTCGAAGGAATAAATT
TCCCAATAGATTTGAATGGAATAAAAAGTTCTGTAAGCAGAATCCCTCTA
TTAAAACAAATGTATTCGCTATTAATAACAAGAAGTTGGGGATTATATAC
AAAGATCACCTGGACTATAAATGATGTAATCTATTATTATATAAAGACCA
TTATGTTCTATGTAAAAATGTACTTGTTTTTCTAGGGAACAGTAAATCAG
AAATAATATGCAATGTCTGAATTGCTTCGCCTCCTTCAAGGTTGAGAATG
CATTGAAAACCCAGCAGAAATTATGCGTTCAAAATGAGGAAGGAGTTGCA
ACGTTCCATAGAGATAAGTATCATGAATTCAAAAATTTCCAATTCAAGAA
TAAGGCTCCATTCTATTGTTATTGAATCATGGAATAAAATCGAGAATGAT
GGGGATATTGCAAGTGAACAAAAGGAGTTTTTTTATTCAATGTATATAAA
AAGCAATTATCCTCAATTAATGAAAGATCAGCTCATACATTATTACGGAG
AAGATGCAGACATTGATTTCGCAGAGACCATCAATAATTTAAGTGCGGAA
TTTCATGATCTTTTGAAAACTGAATACGATATAAATTTATCCAAAGAACT
ACAAGAGGACTATAGCCGCTTTAGTTTCTGTCATTATTGTAAAAATATAT
TGGCTGAAGAAGATTATAAAGTAATGGATCATGATCAGTGCTTGATGAAT
GATAATTATCGAGGAGCGGCACATAATTCATGTAATTTGAAAGCGAGGAA
AAATAATTTCGTTCCAATTTACTTTCATAATGGTAGTGGTTATGATAATC
ATCTGATATTCTTACCACTAGCCGCTAATGTCTCGAATATAATTACAAGC
ACCAATGAGAAATATATTTCCTTCATTTTTGGATCAATGAGGTTGGATTC
GTACAGGATGGTGCCTTGCGCTCTTGATTATCTCGCAGTTCTTTTAAAAC
CTGAGGATTGTAAGATATTTAATAAATATAATAAATATTACAACTTCCTA
GCTCCAAAAGGTATTTACCCAAATGAATATATTTCCGGGAAAAACTTTGA
TTATGTTGAGGAAAAAATGAAAAAGAAATTACTGAATAAGAAAGAAATTT
ACAATCATTTGAAATTATCCGATATTCCTCAGGATGATTATAAATACCCT
CAAAAATTATGGGATTTATTGAAATGTAAAACAAGGAATATACTATGAAT
TATCTGAACATGGACGTTTTCCCACTGGCGGATGTTTTTAAAAGATTCGG
GAATATTTGTTTTGAAAACTTCAGTATTGATCATTGTTATTGTTATTTAC
TCTCGGGATTTACTTGGGACAGTGGAATGAAATAAATGGATGGTGAAACT
TAAATACTTAAGAAAAAAACCTTTGATCAATTATTATTAATAGAAGAAGG
AGTTAGAGGAGGGTTTTCAGGAGTGCTTGGAAGTAGACTTGTTTAAGTTG
GTGAAAGTGTAGGTAATTCCCTATACTATTTTGATGCAAACTCTCTGTTC
TGTAACAGCTATGATTGAGACATTTCCAACTTTCGAAATGAAATTCTGCA
AGGATAAAAAATACGTCAAATAATTAAATCATCCAATAAAATATGTTTGC
GTCATGGATTTAAAATACCCAGAGGAAATTCATGGTAAAACAAGATACTT
CCCATATTGTCTGAGGAGAATGAAGATCCCGGAAAGTTGGAAATCTAAAT
GGCAAAAGGAAAGTAATCACGATGGGTACGTAACAACCGAAAAATTAATT
CAAACCCAAGAGGATGTGAAAAACTATGTGATTGAAAGTCAGTGTTTAGA
TTGGACCTTGGAAAACCTGATGATCCTAGAGAAAGTCCATGAGAAATTAA
TGTATCAGAAATCATATTGGCTTAAACCGTATATAGAATTTAATATAAAG
AAACGGAATGAAACAAAAGCCGAAGGAAATAAATTCGGGTATTTTTTTTA
TAAATTATTGAACAACGCATTTTACGGAAAGACTCTCAAGAATGTGAGGA
ATAGATAGTCTATAGAGATTGTTAGCAATATAGAAAGGTTGAAGACGATT
GCTGCAAAATTGGTTTCCAGAGGATGAAAATATTCTCAGAGGATTGTGGA
ATCGTCTTGTGCGATTAAATTTGATAAGATTAATTACATTGGTTTCGTAA
TCCTATAATTATCGAAACTAGTAATGTAGAAATTTATCAATGATATTTTA
TACAAAATGTACGGCCATAACCTCAAAATTCATTTTGAAGACACTGATTC
AATAATTCCTGAGAAGATCGATAAATATATATAAAACTTCAAATTTGGAT
ATTTCATGGAAGAGATGGGAAAAGGAAAGAAAATCCTAGAGTTTTGTGGA
CTGAAGGCGAAAATGTATTTCCTCAATAAAAAGGATTTAGCTAAAATAGT
TTAATCCTTCATTGAAGAGTAAAGAGATACACGAAGCCTTCAATAATACA
TTTAGGATATGAAGACACAAAGGTATGTTTCAAAAGATTTAAACAAGAAG
GAGTAGGAGCATGGATGATTCGTTCTGTCCTTCATAAAATATTATTTAGT
TTCCATATAAGAAAAGGACTAAATAATTATGATGACAAACGATGCATCTT
AAGCGATGGGATAATTACACTCCTATATAAAAAATCATAGGATAAAGTTG
ATTGAGTCTTTTAAGTAAATCAATAAAAAATATGGAGATATATACAGATA
TTGAATTCAGCGATATTGATATTCAAGTCCTAGATAAATTTCTTGAATAA
TTAAATAGATTCTTCAATGATCCAATTCTTTTTTTTGTCATCTTTCGCAA
TTTGCTCGGTGTTCACCTTTTCCCAGCACGTTCCTTGAGCTCCGCGAGTG
CAGAAACCTCTGCGAGCATCACGTATTCAAAGCCACTTCGAATAAATAAA
TCATCGGAACACATACAGAGTACTCGGGGGAATCAAAGCATTCAAACATG
ACTGGTATTCGAGACGTGAAATACCCAGAGCCTTGGAGACTTGG
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protein sequence of SMED30007047-orf-1

>SMED30007047-orf-1 ID=SMED30007047-orf-1|Name=SMED30007047-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=135bp
MDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQ
TQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKK
RNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*
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protein sequence of SMED30007047-orf-2

>SMED30007047-orf-2 ID=SMED30007047-orf-2|Name=SMED30007047-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=305bp
MRKELQRSIEISIMNSKISNSRIRLHSIVIESWNKIENDGDIASEQKEFF
YSMYIKSNYPQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDI
NLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSC
NLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFG
SMRLDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYI
SGKNFDYVEEKMKKKLLNKKEIYNHLKLSDIPQDDYKYPQKLWDLLKCKT
RNIL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0003887DNA-directed DNA polymerase activity
GO:0003676nucleic acid binding
Vocabulary: biological process
TermDefinition
GO:0006260DNA replication
GO:0071897DNA biosynthetic process
GO:0015074DNA integration
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000464GABAergic neuron
PLANA:0002075pigment cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR001584Integrase_cat-core