DNA_pol_B_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007047 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 23
Homology
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Match: ZC53.4 (pep chromosome:WBcel235:X:1925750:1937689:1 gene:WBGene00022511.1 transcript:ZC53.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZC53.4) HSP 1 Score: 83.9593 bits (206), Expect = 8.382e-16 Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 3198 CV--MDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAK 3659 C+ +DL+YP+EIH + P C +KI NH +KL T D + YVI + L L+ + L+K+H + +++S WL YIE N R K N F FYKL+NN+ +GKT++NVR R + +V++ +++K +A+K Sbjct: 1262 CIFEVDLEYPKEIHSRHNDSPLCPENVKI-----------DNH----VIKKLCNTLFDREKYVIHYENLLQCLQLGLKLKKIHRIITFKESNWLASYIEMNTNPRKNAK---NDFEKDFYKLMNNSVFGKTMENVRERVDVRLVTDEDKIKKLASK 1399 HSP 2 Score: 69.707 bits (169), Expect = 1.756e-11 Identity = 63/203 (31.03%), Postives = 90/203 (44.33%), Query Frame = 3 Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFS---FCHYCKNILAEEDYK---VMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAA----NVSNI----ITSTNEKYISFIFGSMRLDSYRMVPCALDYLAVLLKPEDCKIFNKYNKY-YNFLAPKGIYPNEYI-SGKNFD 2651 Y G +A ++F + I +S E L + + K Q++++ F+ C +C+ ED K V DHD YRG SCN+ RKNNF+P++FHN GYD+HLI L + N I I+S EK+ISF YN + + + KG+YP EY+ S K FD Sbjct: 930 YIGYNATLEFNKYIIKISQEIMSLPS----VRMKKLTQDEWTEFNKNQECPHCQVQYNTEDMKTTKVRDHDH--WTGEYRGPFCGSCNILRRKNNFIPVFFHNLKGYDSHLIVGCLESTKYLNEHEIEIEKISSNTEKFISF---------------------------------SYNPHQFQLMRKKGVYPYEYMDSFKRFD 1093
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Match: H12I13.3 (pep chromosome:WBcel235:II:6071386:6073251:-1 gene:WBGene00019192.1 transcript:H12I13.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H12I13.3) HSP 1 Score: 71.633 bits (174), Expect = 2.771e-12 Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 3390 QCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSR-G*KYSQRIVESSCAIKFDKINYIGFVIL*LSKLVM*K---FINDILYKMYGHNLKIHFEDTDSIIPE 3863 + L L + + L+K+H L +++S W+K YI N R + K N F F+KL+NN+ +GKT++N+RNR +I +V++ + A KL+ + K S I E +++ K +KLV K F D++ K YG +K+ ++DTDS+I E Sbjct: 290 KALIQALNHGLKLKKIHRILTFKESAWMKKYIMLNTNLRKQAK---NDFEKDFFKLMNNSVFGKTMENIRNRVNIRLVTDDDS----ALKLIRKPNFKNSTIITEDLLSVELTK-----------TKLVFDKPIYFHYDVMQKHYGDKIKLCYQDTDSLIYE 433
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A7RR56 (Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g232141 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.646e-59 Identity = 80/264 (30.30%), Postives = 131/264 (49.62%), Query Frame = 3 Query: 2061 PQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF------------------IFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKY--NKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783 P+L++ + + ED F E++ + E ++ K ++ +++E + +Y + CH C L E+ KV+DH C + YRGAAHN+CNL+ R F P+ FHN SGYD+HL L + I I + EKYISF + +R +DS++ + +LD L L E K + + L KG++P ++ NFD + +L K+ Y+ L +DI ++DY++ QK+W+ K T Sbjct: 863 PKLVQ-RTVQGSAEDVAQLFVESLESDIKEIYNKFKFPKEVEMTREDEMNYDNATHCHICGGELGED--KVLDH--CHLTGKYRGAAHNACNLRFRAPKFFPVLFHNLSGYDSHLFVKNLGTSEGKINCIPNNEEKYISFTKQVVVDRFTNKEGKQVDVKRDIRFIDSFKFMSASLDSLVKNLPRESFKNLTIHYKGEQLQLLLRKGVFPYDWFC--NFDQL---DAIQLPPKEAFYSTLNDTDISEEDYQHAQKVWETFKMST 1116 HSP 2 Score: 102.064 bits (253), Expect = 9.646e-59 Identity = 94/325 (28.92%), Postives = 144/325 (44.31%), Query Frame = 3 Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV--ESSCAIK-------FDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII-----------------------------PEKIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMY 3968 AM + PT ++ D++ + HP V +D+ YP +H +P +KI N G KLI D YV+ + L + + KVH + +++S WLK YI+ N R + N F F+KL+NN+ +GKT++N+RNR I +++N ++ A KL+S+ Y R + E+ AI F+K Y+G IL LSK +M F + YG K+ F DTDS++ P I+ + G F +E G G +I EF GL+AK+Y Sbjct: 1232 AMSKPLPTHGFRWMTDQELKEWGRHPC--VVEVDMAYPRHLHDSHDDYPLAPESIKI------------NKVG-----KLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKAT---NDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQ----ARKLISKP-NYKHRTIFCENLAAIHMRKTRLVFNKPVYLGMCILDLSKNLMYDFHYGYVKPKYGDKAKLLFTDTDSLMYEIETEDFYKDISGDVRSMFDTSNYPRNHPSGIESGLNKKIIGMFKDETG-GLQITEFVGLRAKLY 1528 HSP 3 Score: 62.3882 bits (150), Expect = 9.646e-59 Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 2 Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLY--------------YFDANSLF 3100 ++Y YL DV LADVF+ F ++C EN+ +D + Y G WD+ +K E +L D LL+ EEG+RGG S ++ S N+ Y Y DAN+L+ Sbjct: 1118 RDYHDLYLESDVLLLADVFENFRDVCLENYGLDPAWYYTAPGLAWDAALKITRVELELL--TDCDMLLMFEEGIRGGVS------MISTRHSKANNPYMREYDPNLPTKYITYLDANNLY 1229 HSP 4 Score: 30.0314 bits (66), Expect = 9.646e-59 Identity = 21/58 (36.21%), Postives = 30/58 (51.72%), Query Frame = 2 Query: 4052 LGYEDTKVCFKRFKQEGVGAWM--IRSVLHKILFSFHIRKGLNNYDDKRCILSDGIIT 4219 +G++D K C F +E M IRS H + ++ L++ DDKR I DGI T Sbjct: 1553 IGFDDYKDCL--FGKEPQMRMMNVIRSHGHNVYTETVNKRALSHEDDKRIICDDGIHT 1608
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A151IKB4 (DNA_pol_B_2 domain-containing protein OS=Cyphomyrmex costatus OX=456900 GN=ALC62_04349 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.063e-56 Identity = 94/337 (27.89%), Postives = 154/337 (45.70%), Query Frame = 3 Query: 3108 AMIETFPTFEMKFCKDKKYVK*----LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDS------------IIPEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFL---NKKDLAK 3995 AM + P + ++ D + L+ P Y+ +D++YP+ +H P+C R K P +KL+ T D + YVI + L + + + K+H L + +S WL+ YIE N K R K N F YKL+NNA +GKT++NVR+R +++V+ E + A ++++ +S+ + + +KFDK Y+G IL +SK + +F ++ + ++ KI + DTDS II ID++ + N K M++ G + EF GL+AKMY L KKD K Sbjct: 810 AMCQPLPYADFRWVDDVQNFDFSTIPLDSPTGYILEVDIEYPQHLHDAHTDLPFCPTREKPPGK---------------RDDKLLATLCDKQRYVIHYRNLQQCTRHGLSIAKIHRILQFTQSPWLRDYIELNTKFRTLAK---NDFEKNLYKLMNNAVFGKTMENVRDRVDVKLVTKWEG-RYGAEAMIAKPNFHSRSVFSENLVAIELRKLEVKFDKPIYVGMCILDISKTCLYEFHHEYMAPLFHDKCKIMYTDTDSLIYHVECDDVYEIIKRDIDRFDTSDYSIDNPYSIPLANKKVPGLMKDENNGAIMTEFVGLRAKMYALRVQGKKDTKK 1127 HSP 2 Score: 98.9821 bits (245), Expect = 5.063e-56 Identity = 65/243 (26.75%), Postives = 115/243 (47.33%), Query Frame = 3 Query: 2118 FAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVS---NIITSTNEKYISFI------------FGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNK-----YNKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783 FA+ + NL+ ++ T ++ +++ E ++ + CH C+ A++D + DH C + YRG AH++CNL + + +P+ FHN +GYD H I +A +++ T EKY SF +R +DSYR + +LD LA L + ++ + + +N L KG++P EYI D E+ + L + Y+ L + + DY + +W +T Sbjct: 459 FADELKNLAHSVQSIISTNVPMDFTRDDCEKFNSATHCHVCEKPFAKDDKRARDH--CHLTGRYRGPAHSNCNLNYKDSRCIPVVFHNLTGYDAHFIIKEIATAYEGHVDLLPITKEKYTSFTKHVDDTIDDKKNCIQLRFIDSYRFLASSLDKLASFLNKDKLRVLRREFSHLSEENFNLLTRKGVFPYEYI-----DCSEKLNESCLPPRDSFYSSLTDDTVSESDYAHAVNVWQRFSIQT 694 HSP 3 Score: 57.7658 bits (138), Expect = 5.063e-56 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS 3019 EY+ YL DV LADVF+ F + C ++ +D Y Y L GFTWD+ +K + +L D ++ +E G+RGG S Sbjct: 697 EYSDLYLKTDVLLLADVFENFRDSCVASYGLDPAYYYTLPGFTWDAMLKHTGVKFELL--TDIDMVMFVERGIRGGLS 772
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A2L2YHS0 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.827e-56 Identity = 78/242 (32.23%), Postives = 126/242 (52.07%), Query Frame = 3 Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDI-NLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF---IFGSMRL---DSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYN-----FLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLK 2774 Y G+DA F E + + H+ + +L+++ + Y + C+ C + + E+YKV DH C + +RGA+ N+CN++ + NF+P+ FHN SGYD+HL L N NI I EKYISF + G + L DSYR + +LD LA L P+ F NK+++ + KG+YP +YI D+ + + L ++ Y+ L I +DYK+ +++W + K Sbjct: 371 YRGKDAAKIFMEKMREEALIIHEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDH--CHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEENINVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLTPDQ---FLNMNKFFSSSEVPLVLRKGVYPYDYI-----DHESKFEETTLPPQRAFYSKLNDCSISNEDYKHAEEVWQIFK 602 HSP 2 Score: 103.219 bits (256), Expect = 5.827e-56 Identity = 88/302 (29.14%), Postives = 141/302 (46.69%), Query Frame = 3 Query: 3183 PIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII------------PEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKD 3986 P+ ++ +DL YP+ +H P KIP K K +L+ T + YV+ + L + L+ +IL KVH L + +S WLK YI+ N R K N+F F+KL+NNA +GKT++N+RNR ++++ S+ ++ A KL+SR + I+ I F+K IG +L +SK++M KF + Y +K+ + DTDS I E +D + N K M++ KG+ ++EF GL++KMY K+ Sbjct: 748 PLGFIFEVDLDYPKNLHDNHSDLPLA-PETKIPPGCKDK--------------RLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLR---KDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKK----AEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHYTKMKTKYEEKIKLLYTDTDSFIYDITTEDVYSDMNEDLDSFDTSDYPEDNIYGTPRKNKKVLGVMKDENKGEIMIEFIGLRSKMYAFKVKE 1027 HSP 3 Score: 58.9214 bits (141), Expect = 5.827e-56 Identity = 36/113 (31.86%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS------GVLGSRLV*VGESVGNSLY--YFDANSLF 3100 EY+ Y+ DV LADVF+ F ++C ++++D + + G +WD+ +K + +L +D +L IE G+RGG S G ++ + +S +S Y Y DAN+L+ Sbjct: 608 EYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELL--TDYDMILFIESGIRGGISQCSHRYGSANNKYMEAYDSSKSSNYLLYLDANNLY 718
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A2L2YHT1 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.361e-55 Identity = 78/242 (32.23%), Postives = 126/242 (52.07%), Query Frame = 3 Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDI-NLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF---IFGSMRL---DSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYN-----FLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLK 2774 Y G+DA F E + + H+ + +L+++ + Y + C+ C + + E+YKV DH C + +RGA+ N+CN++ + NF+P+ FHN SGYD+HL L N NI I EKYISF + G + L DSYR + +LD LA L P+ F NK+++ + KG+YP +YI D+ + + L ++ Y+ L I +DYK+ +++W + K Sbjct: 371 YRGKDAAKIFMEKMREEALIIHEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDH--CHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEENINVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLTPDQ---FLNMNKFFSSSEVPLVLRKGVYPYDYI-----DHESKFEETTLPPQRAFYSKLNDCSISNEDYKHAEEVWQIFK 602 HSP 2 Score: 103.219 bits (256), Expect = 1.361e-55 Identity = 88/302 (29.14%), Postives = 141/302 (46.69%), Query Frame = 3 Query: 3183 PIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII------------PEKIDKY--------------I*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKD 3986 P+ ++ +DL YP+ +H P KIP K K +L+ T + YV+ + L + L+ +IL KVH L + +S WLK YI+ N R K N+F F+KL+NNA +GKT++N+RNR ++++ S+ ++ A KL+SR + I+ I F+K IG +L +SK++M KF + Y +K+ + DTDS I E +D + N K M++ KG+ ++EF GL++KMY K+ Sbjct: 749 PLGFIFEVDLDYPKNLHDNHSDLPLA-PETKIPPGCKDK--------------RLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLR---KDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKK----AEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHYTKMKTKYEEKIKLLYTDTDSFIYDITTEDVYSDMNEDLDSFDTSDYPEDNIYGTPRKNKKVLGVMKDENKGEIMIEFIGLRSKMYAFKVKE 1028 HSP 3 Score: 57.7658 bits (138), Expect = 1.361e-55 Identity = 35/114 (30.70%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 2786 EYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFS------GVLGSRLV*V---GESVGNSLYYFDANSLF 3100 EY+ Y+ DV LADVF+ F ++C ++++D + + G +WD+ +K + +L +D +L IE G+RGG S G ++ + N L Y DAN+L+ Sbjct: 608 EYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELL--TDYDMILFIESGIRGGISQCSHRYGSANNKYMEASYDSSKPSNYLLYLDANNLY 719
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A4Y2QVZ0 (Uncharacterized protein OS=Araneus ventricosus OX=182803 GN=AVEN_149573_1 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.454e-54 Identity = 104/331 (31.42%), Postives = 167/331 (50.45%), Query Frame = 3 Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHP----IKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKES----NHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV---------ESSCAIKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSI--IPEKIDKY-----------I*NFKFGYFM------EEMGKGKKIL------EFCGLKAKMYFL 3974 AM + PT + + ++ V LN P + Y+ +DL+YP E+H +P ++ + S S + KE N +EKLI + + YV+ + L + ++ + + KVH L +++S WLK YI+FN +R K + F +KLLNNA +GKT++N+RNR +I++V++ + IA KLV+ +S I+ E +C ++ Y+GF IL +SK++M F + + K YG+ K+ F DTDS+ I +D Y N+ +F+ + +GK K L EF GLKAKMY L Sbjct: 843 AMSQNLPTHDFSWTEEN--VDYLNIPDDSDVGYILEVDLEYPSELHHLHNCYPLAPEKVLVSPSEYSDYTKELLYKLNLSKSKPSEKLIPNLRNKEKYVVHYRNLKFYVQLGLKVTKVHRILKFKQSAWLKNYIDFNTDQR---KRATSNFEKDLFKLLNNAVFGKTMENLRNRVNIDLVTD----EKIAKKLVASPAFHSFIIINNDLVSIQREKNCLF-LNRPIYVGFSILDISKILMFDFHYNYIKKKYGNRSKLLFTDTDSLCYIISTVDVYKDISEQLELFDTANYPENHFLFSPTNNKVLGKMKDELSDGIASEFVGLKAKMYSL 1163 HSP 2 Score: 93.5893 bits (231), Expect = 1.454e-54 Identity = 75/239 (31.38%), Postives = 115/239 (48.12%), Query Frame = 3 Query: 2091 YYGEDADIDFAETINNLSAEFHDLLKTEYDIN---LSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVS---NIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKY-YNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783 Y GEDA I+F + NL E +L + + Q+++ C C+ L E+ +V DHD + YRGAAHN+CNL + +P+ HN YD HL+ + + I EK+ISF FGS+R +DS++ + +L+ L LKPE ++ N + K + KG YP +Y FD + + L K +N L + DY Y QK+W++ +T Sbjct: 501 YRGEDAVIEF---LKNLIGEEEWILPKIRKVKPMVFTPVDQQNFQAAVNCWVCEKPLQED--RVRDHDH--LTGLYRGAAHNNCNLNFQIGTHIPVLMHNLKNYDLHLLMHGIGKFKNRKIQCIPQNTEKFISFSFGSLRFIDSFQFLNTSLEKLVKNLKPEQLRLCNNFFKANAELITRKGCYPYDY-----FDSFSKFNETSLPPKSAFFNSLTNEAVSDKDYGYAQKIWNIFNLQT 727 HSP 3 Score: 52.373 bits (124), Expect = 1.454e-54 Identity = 34/108 (31.48%), Postives = 51/108 (47.22%), Query Frame = 2 Query: 2801 YLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGG-------FSGVLGSRLV*VGESVGNS-LYYFDANSLF 3100 Y+ DV LADVF+ F +C + ID C+ + G W + ++ E +L D L IE+G+RGG F+ L NS + Y+DAN+L+ Sbjct: 735 YVTSDVLLLADVFENFRTLCLNYYKIDPCHMFTAPGLAWQACLRMTGVELELL--TDIDMHLFIEKGIRGGVAMISHRFASANNPYLPTYDPDTPNSYIMYWDANNLY 840 HSP 4 Score: 28.4906 bits (62), Expect = 1.454e-54 Identity = 17/66 (25.76%), Postives = 30/66 (45.45%), Query Frame = 2 Query: 4046 IHLGYEDTKVCFKRFKQEGVGAWMIRSVLHKILFSFHIRKGLNN-------YDDKRCILSDGIITL 4222 +H +++ +K + A R+ I+ S H+ + N +DDKR +L DG+ TL Sbjct: 1176 VHKSVLKSRISHDDYKNCLLDAQRTRNSFKTIISSSHVLNTVQNTKISLCPFDDKRYVLHDGVSTL 1241
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000055500.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001032.1:12601:13692:-1 gene:ENSAMXG00000041341.1 transcript:ENSAMXT00000055500.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.1434 bits (126), Expect = 1.508e-6 Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 857 WSADLIETLN-PKNSENYRYILTIIDLYIRYVCAIQLLNKQSETMKEAFENLFESNPNRVPNKLYVDNGKEFYK*LFQEFIEENDI 1111 W ADL++ N K++++ +++LT ID+ +Y L NK + +AF ++ + RVP KL D GKEF+ FQ +++++I Sbjct: 76 WQADLVDMSNLSKDNKDMKFMLTCIDILSKYAWVRVLRNKTGVEVTDAFNSILKEG--RVPKKLQTDQGKEFFNKNFQGLMKKHNI 159
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO46109 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR56]) HSP 1 Score: 107.071 bits (266), Expect = 1.892e-62 Identity = 80/264 (30.30%), Postives = 131/264 (49.62%), Query Frame = 3 Query: 2061 PQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNI--ITSTNEKYISF------------------IFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKY--NKYYNFLAPKGIYPNEYISGKNFDYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKT 2783 P+L++ + + ED F E++ + E ++ K ++ +++E + +Y + CH C L E+ KV+DH C + YRGAAHN+CNL+ R F P+ FHN SGYD+HL L + I I + EKYISF + +R +DS++ + +LD L L E K + + L KG++P ++ NFD + +L K+ Y+ L +DI ++DY++ QK+W+ K T Sbjct: 863 PKLVQ-RTVQGSAEDVAQLFVESLESDIKEIYNKFKFPKEVEMTREDEMNYDNATHCHICGGELGED--KVLDH--CHLTGKYRGAAHNACNLRFRAPKFFPVLFHNLSGYDSHLFVKNLGTSEGKINCIPNNEEKYISFTKQVVVDRFTNKEGKQVDVKRDIRFIDSFKFMSASLDSLVKNLPRESFKNLTIHYKGEQLQLLLRKGVFPYDWFC--NFDQL---DAIQLPPKEAFYSTLNDTDISEEDYQHAQKVWETFKMST 1116 HSP 2 Score: 102.064 bits (253), Expect = 1.892e-62 Identity = 94/325 (28.92%), Postives = 144/325 (44.31%), Query Frame = 3 Query: 3108 AMIETFPTFEMKFCKDKKYVK*LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIV--ESSCAIK-------FDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSII-----------------------------PEKIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMY 3968 AM + PT ++ D++ + HP V +D+ YP +H +P +KI N G KLI D YV+ + L + + KVH + +++S WLK YI+ N R + N F F+KL+NN+ +GKT++N+RNR I +++N ++ A KL+S+ Y R + E+ AI F+K Y+G IL LSK +M F + YG K+ F DTDS++ P I+ + G F +E G G +I EF GL+AK+Y Sbjct: 1232 AMSKPLPTHGFRWMTDQELKEWGRHPC--VVEVDMAYPRHLHDSHDDYPLAPESIKI------------NKVG-----KLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKAT---NDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQ----ARKLISKP-NYKHRTIFCENLAAIHMRKTRLVFNKPVYLGMCILDLSKNLMYDFHYGYVKPKYGDKAKLLFTDTDSLMYEIETEDFYKDISGDVRSMFDTSNYPRNHPSGIESGLNKKIIGMFKDETG-GLQITEFVGLRAKLY 1528 HSP 3 Score: 62.3882 bits (150), Expect = 1.892e-62 Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 2 Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLY--------------YFDANSLF 3100 ++Y YL DV LADVF+ F ++C EN+ +D + Y G WD+ +K E +L D LL+ EEG+RGG S ++ S N+ Y Y DAN+L+ Sbjct: 1118 RDYHDLYLESDVLLLADVFENFRDVCLENYGLDPAWYYTAPGLAWDAALKITRVELELL--TDCDMLLMFEEGIRGGVS------MISTRHSKANNPYMREYDPNLPTKYITYLDANNLY 1229 HSP 4 Score: 30.0314 bits (66), Expect = 1.892e-62 Identity = 21/58 (36.21%), Postives = 30/58 (51.72%), Query Frame = 2 Query: 4052 LGYEDTKVCFKRFKQEGVGAWM--IRSVLHKILFSFHIRKGLNNYDDKRCILSDGIIT 4219 +G++D K C F +E M IRS H + ++ L++ DDKR I DGI T Sbjct: 1553 IGFDDYKDCL--FGKEPQMRMMNVIRSHGHNVYTETVNKRALSHEDDKRIICDDGIHT 1608
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000080616.1 (SMESG000080616.1) HSP 1 Score: 333.183 bits (853), Expect = 1.208e-101 Identity = 217/467 (46.47%), Postives = 277/467 (59.31%), Query Frame = 3 Query: 2442 ITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNF-DYVXXXXXXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCKTRNIL*II*TWTFSHWRMFLKDSGIFVLKTSVLIIVIVIYSRDLLGTVE*NKWMVKLKYLRKKPLINYY**K-------KELEEGFQECLEVDLFKLVKV*VIPYTILMQTLCSVTAMIETFPTFEMKFCKDKKYVK*-LNHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*KYSQRIVESSCA--------IKFDKINYIGFVIL*LSKLVM*KFI 3788 + ST+EKYISF GS+R LDSY+M+P L+YL LLKP+D KIFNK+ N KGIY EYISGKNF D ++ + +LL + YNHLK++++ + DY + Q+ +W + +++ I L V LL V N V L+ P Y+ K + GF L L + + P TAM + PT EMK CKD KYVK LNH I Y+ ++DLKYP E+H KT YFP+C R++K+ E S+WQKE+N Y TTE LIQ+Q+D+K YVIE +CLDW LEN ++L+KVH+K+MY KSYWLKPYI+FNIKKR E+K +GNKFG FYKLLNNAFYGKTL+NVRNR SIEIVS E+LK+IAAK + +I CA IKF+K NY GFV+L LSKL M KFI Sbjct: 1 MQSTDEKYISFSVGSLRFLDSYKMMPLPLEYLESLLKPKDLKIFNKFYLQLNLNIRKGIYLYEYISGKNFEDTKQKLSESQLLEISKFYNHLKMTELNEKDYLFGQE-----------------SWHLLEYGRNMEEYTIHYLNMEVF----------LLADVFENFRNVCLENFGIDPCYCYFLSGLTWVSGMKVTQRGFSGVLGDRLVVVHEKERYPLYYFDANSLYPTAMTDELPTGEMKLCKDSKYVKTILNHLIGYIYIVDLKYPVELHDKTEYFPFCPRKVKVQEESLSQWQKENNPLNYKTTEILIQSQDDLKEYVIEGRCLDWYLENGIVLKKVHKKIMYNKSYWLKPYIKFNIKKRTESKQQGNKFGDVFYKLLNNAFYGKTLENVRNRKSIEIVSTKEKLKSIAAKAGYQ----RMKIFSEECAAVHFNKNTIKFEKFNYTGFVLLELSKLYMYKFI 436 HSP 2 Score: 105.145 bits (261), Expect = 2.778e-23 Identity = 56/109 (51.38%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKTFDQLLLIEEGVRGGFSGVLGSRLV*VGESVGNSLYYFDANSLFCNS 3109 +EYT++YLNM+VF LADVF+ F N+C ENF ID CYCY LSG TW SGMK + GFSGVLG RLV V E LYYFDANSL+ + Sbjct: 119 EEYTIHYLNMEVFLLADVFENFRNVCLENFGIDPCYCYFLSGLTWVSGMK----------------------VTQRGFSGVLGDRLVVVHEKERYPLYYFDANSLYPTA 205
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000015240.1 (SMESG000015240.1) HSP 1 Score: 302.368 bits (773), Expect = 6.198e-89 Identity = 182/369 (49.32%), Postives = 233/369 (63.14%), Query Frame = 3 Query: 1599 FPNRFEWNKKFCKQNPSI-KTNVFAIN-NKKLGIIYKDHLDYK*CNLLLYKDHYVLCKNVLVFLGNSKSEI--ICNV*IAS--PPSRLRMH*KPSRNYAFKMRKELQRSIEISIMNSKISNSRIRLHSIV---IESWNKIENDGD-----IASEQKEFFYSMYIKSNYPQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDIN-LSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNFDYV 2657 FP +KF +QN +I K NVF IN NKKLGI+Y+DHLD K CNLLLYKDHYVLCKN VFL NSK ++ +C AS + L+ H + + + + + + + N + ++ + E+WNK+ D I SEQK F +S+Y+KSNYP L++D+ I Y GEDA FAETIN+LS E LKT Y I+ LS E +Y C YC + KVMDHD L +NYRGAAHN CNLKAR NNF+P+YFHNGSGYDNHL+FLPLA N++ II ST+EKYISF G +R LDS++ +P +L+YLA LL+PE K FNK+ +N KGIY EYISGKN+ + Sbjct: 199 FPIHLNGIQKFARQNYTIVKINVFTINDNKKLGILYRDHLDPKGCNLLLYKDHYVLCKNFGVFLKNSKVDVSFLCLNCFASFTVENALKKH----QQFCVEHEEGIASFPHVPYHEFQNYNYKNKVPFVCYSDFEAWNKVAGDTLDRNDLIRSEQKGFCFSIYLKSNYPLLVEDRNIVYEGEDATTAFAETINSLSEELKPKLKTNYIISELSDEQLNEYRNEVICFYCGKEFTPTNDKVMDHDHYLEKNNYRGAAHNDCNLKARTNNFIPLYFHNGSGYDNHLVFLPLAPNITKIIPSTDEKYISFTVGCIRFLDSFKTMPLSLEYLASLLEPEHLKTFNKFYPQFNLKIRKGIYNYEYISGKNYTEI 563 HSP 2 Score: 77.7962 bits (190), Expect = 3.530e-14 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 1814 CLNCFASFKVENALKTQQKLCVQNEEGVATFHRDKYHEFKNFQFKNKAPFYCY 1972 CLNCFASF VENALK Q+ CV++EEG+A+F YHEF+N+ +KNK PF CY Sbjct: 273 CLNCFASFTVENALKKHQQFCVEHEEGIASFPHVPYHEFQNYNYKNKVPFVCY 325
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022089.1 (SMESG000022089.1) HSP 1 Score: 220.705 bits (561), Expect = 3.407e-72 Identity = 125/210 (59.52%), Postives = 157/210 (74.76%), Query Frame = 3 Query: 3396 LDWTLENLMILEKVHEKLMYQKSYWLKPYIEFNIKKRNETKAEGNKFGYFFYKLLNNAFYGKTLKNVRNR*SIEIVSNIERLKTIAAKLVSRG*K-YSQRIVESS---CAIKFDKINYIGFVIL*LSKLVM*KFINDILYKMYGHNLKIHFEDTDSIIPE--------KIDKYI*NFKFGYFMEEMGKGKKILEFCGLKAKMYFLNKKDL 3989 LDW LE MILEKVH+KL+Y+K WLKPYI+FNIKKR E+KA GNKFG FFYKL+N++FYGKTL+NVR+ IEI+S ER KT+A+K+ + K +S+ + C+IKF+K NYIGFVIL LSKLVM +FI ++LYK YG+N +IHF DTDSII E KI ++I + K GYF +EMG KKIL+FCGLK+K FL+ KDL Sbjct: 2 LDWYLELGMILEKVHKKLIYRKFKWLKPYIDFNIKKRLESKAIGNKFGDFFYKLMNHSFYGKTLENVRDSQEIEIISCKERFKTVASKVGLQSFKIFSEDCAAAHFKKCSIKFNKFNYIGFVILELSKLVMNRFIYNVLYKTYGNNFRIHFGDTDSIILELVKHQRIDKIHEHIHDTKLGYFKDEMGPNKKILDFCGLKSKENFLDIKDL 211 HSP 2 Score: 73.1738 bits (178), Expect = 3.407e-72 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 4010 H*RVKRYTKPSIIHLGYEDTKVCFKRFKQEGVGAWMIRSVLHKILFSFHIRKGLNNYDDKRCILSDGIITLLY 4228 H RVK Y+KPSI +LGYE+ K C +Q+ VG W ++S HK+ + R G++NYDDKR ILS+GI +L Y Sbjct: 219 HKRVKGYSKPSIKNLGYEEAKECLLFKEQQEVGGWKLKSNHHKMYIQEYSRVGIHNYDDKRYILSNGISSLPY 291
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000075540.1 (SMESG000075540.1) HSP 1 Score: 214.927 bits (546), Expect = 4.620e-71 Identity = 129/283 (45.58%), Postives = 184/283 (65.02%), Query Frame = 3 Query: 1941 NSRIRLHSIVIESWNKIENDGDIASEQKEFFYSMYIKSNYPQLMKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNN-FVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCKIFNKYNKYYNFLAPKGIYPNEYISGKNFDYVXXXX-XXXXXXXXXIYNHLKLSDIPQDDYKYPQKLWDLLKCK 2780 + ++ L ++ E+WNK+E D EQK F +S+Y+KSNY L++DQ I Y GEDA FAE INNL+ E +LKT + ++ ++ +Y C YC + ++++ +C+ +C L+ + NN FVP YFHNG+GYDNHLIFLPLA N++ I+ ST+EKYISF +R LDSY+M+P +LDYL+ LLKPED KIFNK+ +N KGIYP EYISGKN+ VE+K+ + +L + + YNHL++ ++ + DY Y + WDLLKCK Sbjct: 412 SQKLVLENVDFEAWNKLEEYNDTKGEQKGFCFSIYLKSNYLNLLEDQHIVYRGEDATTKFAEIINNLTEELKIILKTNFVLDANEAQLNEYRNCKTCFYC-------NKELLNDKRCI-----------TCRLQFKANNIFVPFYFHNGTGYDNHLIFLPLAPNITKILPSTDEKYISFSVDCIRFLDSYKMMPLSLDYLSSLLKPEDLKIFNKFYPRFNGKVRKGIYPYEYISGKNYKNVEQKLFEPELPSIQFFYNHLEMDELSEKDYLYAHESWDLLKCK 676 HSP 2 Score: 75.0998 bits (183), Expect = 4.620e-71 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 2783 KEYTMNYLNMDVFPLADVFKRFGNICFENFSIDHCYCYLLSGFTWDSGMK*MDGET*ILKKKT 2971 +EYTM+YLNMDVF LA VF+ F N+C ENF ID YC+ LSG TW SGMK + KKKT Sbjct: 679 EEYTMHYLNMDVFLLAYVFENFRNVCLENFGIDPSYCFSLSGLTWVSGMKFTQVKLKHFKKKT 741 HSP 3 Score: 72.7886 bits (177), Expect = 8.946e-20 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 511 PGNRLDIRLNENDNPKSGEEPINRADAVVLKHDIAYRQEDIR 636 PG R+DIRL ENDNPK G+EPINR D LKHDIAYRQEDIR Sbjct: 20 PGTRVDIRLGENDNPKPGKEPINRVDEAALKHDIAYRQEDIR 61 HSP 4 Score: 45.0542 bits (105), Expect = 8.946e-20 Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 2 Query: 641 KADIDLIQDLNEIEDPTF*ERFSRAISKG 727 KADIDLIQDLNEI+ TF ERF RAI+K Sbjct: 65 KADIDLIQDLNEIQSSTFGERFLRAIAKA 93
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000052330.1 (SMESG000052330.1) HSP 1 Score: 221.09 bits (562), Expect = 1.848e-64 Identity = 106/166 (63.86%), Postives = 130/166 (78.31%), Query Frame = 3 Query: 2070 MKDQLIHYYGEDADIDFAETINNLSAEFHDLLKTEYDINLSKELQEDYSRFSFCHYCKNILAEEDYKVMDHDQCLMNDNYRGAAHNSCNLKARKNNFVPIYFHNGSGYDNHLIFLPLAANVSNIITSTNEKYISFIFGSMR-LDSYRMVPCALDYLAVLLKPEDCK 2564 MK + Y+GE + FAETINNLS +F ++LKTEY I++SKE +E+Y++ S C+YC+ EEDYKVMDHD L NYRG AHN CNLKA+K NFVPIYFHNGSG DNHLIFL LA NV+ II ST+E+YISF G+MR LDSYR++P +LDYLA LLKPE+C+ Sbjct: 1 MKSHYVEYFGEHEALHFAETINNLSVKFKNILKTEYSIDVSKEQREEYNKSSCCYYCEKKFTEEDYKVMDHDHYLFEKNYRGTAHNRCNLKAKKINFVPIYFHNGSGCDNHLIFLALAPNVTKIIPSTDERYISFSVGTMRFLDSYRLMPLSLDYLASLLKPEECE 166 HSP 2 Score: 106.686 bits (265), Expect = 5.597e-25 Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 3177 NHPIKYVCVMDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQTQEDVKNYVIESQCLDWTLENLMILEKVHEK 3446 N P +V +DLKYP+ +H KT+YFP C ++ +PE WKS+W++E+N GY TTEKLIQTQ + KN ++E + L+W LE M+LE+VH+K Sbjct: 187 NSPEGFVYEVDLKYPQSLHDKTKYFPCCPEKLTVPEEWKSEWKQENNLGGYKTTEKLIQTQGNKKNDIVEGRMLNWYLELGMVLERVHKK 276 The following BLAST results are available for this feature:
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007047 ID=SMED30007047|Name=DNA_pol_B_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=4594bpback to top protein sequence of SMED30007047-orf-1 >SMED30007047-orf-1 ID=SMED30007047-orf-1|Name=SMED30007047-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=135bp MDLKYPEEIHGKTRYFPYCLRRMKIPESWKSKWQKESNHDGYVTTEKLIQback to top protein sequence of SMED30007047-orf-2 >SMED30007047-orf-2 ID=SMED30007047-orf-2|Name=SMED30007047-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=305bp MRKELQRSIEISIMNSKISNSRIRLHSIVIESWNKIENDGDIASEQKEFFback to top Annotated Terms
The following terms have been associated with this transcript:
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