SMED30007031
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007031 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 27
Alignments
SMED30007031 aligns in the following genomic locations:
Homology
BLAST of SMED30007031 vs. Planmine SMEST
Match: SMESG000064314.1 (SMESG000064314.1) HSP 1 Score: 536.569 bits (1381), Expect = 9.932e-175 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISE Sbjct: 1782 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISE 2082 HSP 2 Score: 220.705 bits (561), Expect = 1.198e-64 Identity = 183/349 (52.44%), Postives = 219/349 (62.75%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT-QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVD-----------------------------------------KTYHSVDQNESELANQNIIKIDKGEKNILDQVNV--LYKT---DHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 ESE AESNI+EVD+ E KQ ++++ EEVSNVD TDHS + NE +LAEQNIIEVDV +RNISE+ NL+EVS V E D VD NE+E ESNIN VDE ET QEQ+ EEVS V E + SV NE+ E K+VD E Q+ N + SK+DETDHS+ N+S+P ESNI +VD+ E QQEQVNS+EV NVD +T HSVDQNE EL QNII+IDK EKNI DQVNV L K DHS DPN+ + A NINEV+ E KQQE VNS E+S+V KD S + N+ E EPN+ +DEVEKNI E Sbjct: 2180 ESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIE 2528 HSP 3 Score: 211.075 bits (536), Expect = 2.021e-61 Identity = 157/308 (50.97%), Postives = 204/308 (66.23%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT-QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 E E + NI +D+ E ++ ++ E+S +D+ D S NESKLAE IIE+D + NI++ NL E+S V E S DLNENEP+E NIN+VDE E QEQ+ E VSKV EKD S DPNE + +HNI ++D+ E +N+D VSK+DE HS D+ ES+P E NI EVD+GE QQEQ N EEV V+K +S D N+SEL +II+ID+GE NI D VNV + +TDH+ + N+ + E NI EVD GEPKQQEQVN +EVSKV+ K S DTNESE+ EPN+ + E E +ISE Sbjct: 2912 EREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISE 3219 HSP 4 Score: 200.675 bits (509), Expect = 9.684e-58 Identity = 157/297 (52.86%), Postives = 207/297 (69.70%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVE 888 ES+ E NI +VD+ E+KQ K+I+L+ VS +D+TDHS D+NESK E NIIEVD GE EQ N EEVSNV +T SVD NE+E NI K+D+ E I ++V+ + + D SVDPN+ E NI +VD E KQ +Q+N D VSK+D D SVDTNES+ E N+IE+D+ E E+ N +E+ NV++T HS DQN+ ELA Q II+ID+ EKNILDQVNV+ +TDHS + NK + +E INEVD + KQQ++V+ D VSKVD KD+S++ NESEL E N+ E+DE E Sbjct: 1904 ESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKN----ILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERE 2195 HSP 5 Score: 186.422 bits (472), Expect = 8.074e-53 Identity = 158/318 (49.69%), Postives = 207/318 (65.09%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT-QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNV----------DKTYHSVDQNESELANQNIIKIDKGEKNI------LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNIS 900 ESEP+E NINEVD+ E KQQ++ + EEV V+K D+S D N+S+L E +IIE+D GE NI++ N++EVS V ETD + +LNE+EP ESNI +VDE E QEQ+ EEVSKV EK S D NES+ VE NIK V E E ++ N++ +SK+DE D SV TNESK E IIE+D GE + V +E SN ++T HS DQ E E A NI + GE+ I L+ ++ +Y+ D S D N+ + +E INEVD GEPKQQEQVN +EVSKV+ KD S D NES L E ++EID+ + NI+ Sbjct: 3076 ESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNI--NEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNIT 3391 HSP 6 Score: 185.652 bits (470), Expect = 1.758e-52 Identity = 131/262 (50.00%), Postives = 178/262 (67.94%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT-QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGE 765 E+EP+E NINEVD+ E KQQ++++ E VS V++ D+S D NE +LA+ NI E+D GE NI++ N++EVS V E S D E+EP+E NIN+VDE E QEQ EEV KV +KD S DPN+S+ VE +I ++D+ E +N+D VSK++ETDH+ + NES+P ESNI EVD+GE QQEQVN EEVS V++ S D NESE+ NI + +GE +I ++ NV + + D SV N+ KLAE I E+D GE Sbjct: 2994 ENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGE 3255 HSP 7 Score: 185.267 bits (469), Expect = 1.844e-52 Identity = 172/390 (44.10%), Postives = 217/390 (55.64%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQ-EQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDV-SKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEV-----------------------------------------SNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSV-----------------------------------------DPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 ESE AESNI+EVD+ E KQ ++++ EEVSNVD TDHS + NE +LAEQNII VDV +RNISE+ NL+EVS V E D VD NE+E ESNIN VDE ET Q EQ+ EEVS V E + SV NE+ E K+VD E Q+ N + SK+DETDHS+ N+S+P ESNI +VD+ E QQ+QVNSE+V SNVD+ HS DQ +SELA NI +D+ E+NI N+ + K DHSV DPN+ + AE NINEVD E KQQ++++ +EVS VD D S D+NES+L E N+IE+D E+NISE Sbjct: 1454 ESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISE 1843 HSP 8 Score: 176.022 bits (445), Expect = 3.627e-49 Identity = 146/307 (47.56%), Postives = 199/307 (64.82%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQ-EQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV--LYKTD---HSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNIS 900 E E ESNI V++ + ++ ++ E S +D+ D S D N+S+L+E IIE+D E+NIS+ N++EVS V ETD + +LNE+EP ESNI +VD E Q EQ+ EEVSKV E D S DPN S+ + NI ++ K H++ NL +VSK E D SVD NE + V+ NI +D+GE E+ N E+S +D+ SV NES+LA II+ID+ + NI D VN+ + K D HS D N+ + +E+NINEVD GEPKQQEQVN + VSKV+ KD S D NE EL + N+ EID+ E NI+ Sbjct: 2750 EIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINEL--GGKMTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIA 3054 HSP 9 Score: 164.851 bits (416), Expect = 2.557e-45 Identity = 151/311 (48.55%), Postives = 199/311 (63.99%), Query Frame = 1 Query: 4 SEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQ-EQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV---------LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 SE A+ NI +V++ E K+Q++I+LEEV+NVD+ D+S D NE L E + EV E ++ N EE S + ETD SVDLNE+E ESNI++VDE ET Q EQ+ SEEVS V D S +PNE + E NI VD D++ +++NLD VSK+DE D VD NES+ ESNI +VD+GE QQEQVN EEVSNV + +SV NE+ L I K N+ + NV + +TDHS+ PN+ + AE NIN+VD E KQQ+QVNS++V +V K S D N E +PN+ +DE EKNI E Sbjct: 1374 SELADHNIIKVEE-ETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTES----IKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIE 1679 HSP 10 Score: 164.081 bits (414), Expect = 4.415e-45 Identity = 132/280 (47.14%), Postives = 176/280 (62.86%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDE-EETTQEQLISEEVSKVGEKDVSVDPNE----------SDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVN 789 ESEP ESNI EVD+ E KQQ++++ EEVS V++ S D+NES++ E NI V GE +ISE+ N+ E+S + E D SV NE++ E I ++D+ E + + +E S KD S D NE + E NI + E+E Q K NL D+SK+ E D S D+NES+P ES I EVD+GE QQEQVN EEVS V++ +S D NES LA I++ID+G+ NI D VN+ + + DHS D N+ + +E NINEVD GEPKQQEQVN Sbjct: 3158 ESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEK-FNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVN 3436 HSP 11 Score: 160.999 bits (406), Expect = 4.936e-44 Identity = 146/305 (47.87%), Postives = 202/305 (66.23%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEE--TTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQ-INLDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNI-----LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEK 891 +SEPAESNIN+VD+ E KQQ +++ E+V V + +S D N + + N+ VD E+NI E+ N++ +SNV E + S D ++E E NI VDEEE T + + EE SKV + D SV+ NE E K++D++E+ Q I+ + SKLDE +S D NES+P ESNI EVD E QQ++++ EEVSNVDKT HS D NES+LA QNII++D GE+NI L++V+ +++TD SVD N+ + E NIN+VD E QEQ+ S+EVSKV KD SVD NES+ E N+ ++DE EK Sbjct: 1618 QSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEE-SKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEE-TTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEK 1920 HSP 12 Score: 150.599 bits (379), Expect = 1.819e-40 Identity = 119/245 (48.57%), Postives = 159/245 (64.90%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT-QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQ-VNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVD 711 ESEP+ES INEVD+ E KQQ++++ EEVS V++ D+S D NES LAE I+E+D G+ NI++ NL E+S V E D S DLNENEP+ESNIN+VDE E QEQ+ E VSKV EKD S DP+E + E NI + + +++ NL + SK+ E D S D N+S+ E NI VD+ E QQ+Q N EE S V + +S D NE+EL +I I +GEKNI ++ NV ++ HS D Sbjct: 3331 ESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEFGGE--MTNEKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFD 3573 HSP 13 Score: 142.51 bits (358), Expect = 1.242e-37 Identity = 134/351 (38.18%), Postives = 190/351 (54.13%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVD-----------------------------------------KTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLI-SEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEK----------------KQH--------------KQIN------------LDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDK----GEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVN 789 +SEPAESNIN+VD+ E KQQ++++ +EV NVD +T+HS D NE +L EQNIIE+D E+NIS+Q N++E+S V E D S D NE+E SNIN+V+++ET Q++L+ S+E+S+V EKD S +PN+ +FVE NIK VDE EK +H K +N ++VSK+DE +S D NE+ E EVD+ E Q + V SEE+ D+T +SVDQ E E A NI ++D+ EK L +V+ + +TDHSVDPN+ + + NINE+ GE ++VN Sbjct: 2344 QSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVDNIENIQTDYVKSEELK-ADETEYSVDQIERESAESNIDEVDEEEITQEKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVN 2693 HSP 14 Score: 133.265 bits (334), Expect = 1.699e-34 Identity = 144/364 (39.56%), Postives = 191/364 (52.47%), Query Frame = 1 Query: 4 SEPAESNINEVDKAERKQQKK-IDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVF-------------------------------ETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIK-------------------KVDEDE--------KKQHKQI----NL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 SE AE NIN VD+ E KQQ++ + EE S V + D+S D NE++L E +I + GE+NISE+ N++E++ VF ETD + D NE+EP ESN N+VDEEE E+ SKV EKD S DP +++ VE IK KVD+ E K + + I NL D+S++DE DHSV++NE N+IEVD G+ Q E N EE+S VD+ +HS + NESEL NI ++D+GE N QVN PN+ E N NEVD GE Q E VN +E S VD D VD ES +P+V ++ E EKN +E Sbjct: 3494 SELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEE-----ESKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSVNQMKCKIEERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVN----------PNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSEGEKNKAE 3842 HSP 15 Score: 132.494 bits (332), Expect = 3.217e-34 Identity = 118/260 (45.38%), Postives = 165/260 (63.46%), Query Frame = 1 Query: 31 EVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDE-EETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVN 789 EVD E Q + EE+ D+T++S D E + AE NI EVD E E+ NL+EVS V ETD SVD NE+EP+ SNIN++ + E+ +++ ++VSK E D SVDPN+S+ + I +++ + HK+INLD V K+DE + SVD NE + VESNI V++G+ E+ N E S +D+ SVD N+SEL+ II+ID+ EKNI D VNV + +TD + + N+ + E NI EVD GEPKQ+EQVN Sbjct: 2600 EVDNIENIQTDYVKSEELK-ADETEYSVDQIERESAESNIDEVD-EEEITQEKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGE--ITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVN 2855 HSP 16 Score: 131.724 bits (330), Expect = 7.229e-34 Identity = 143/346 (41.33%), Postives = 190/346 (54.91%), Query Frame = 1 Query: 1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQD-----------------------------------------NLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGE---KNI-LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNIS 900 ESE A SNINEV+K E KQQ+ ++ +E+S V + D+S + N+ + E NI VD E+NI E+ NL EVS V E S D NEN TE +VD E Q + E K E + SVD E + E NI +VDE+E Q K NL +VSK+DETDHSVD NES+P SNI E+ GE ++VN ++VS D++ HSVD N+SE I +I+ GE K I LD+V + + + SVDPN+I++ E NI V+ G+ E+ N +E S +D D SVD N+SEL E +IEID+VEKNIS Sbjct: 2467 ESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVDNIENIQTDYVKSEELKADETEYSVDQIERESAESNIDEVDEEEITQEK-FNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIE-GEITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNIS 2810 HSP 17 Score: 126.716 bits (317), Expect = 2.904e-32 Identity = 126/291 (43.30%), Postives = 179/291 (61.51%), Query Frame = 1 Query: 25 INEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEID 879 I V++ ER +L EVS VD+ +S D NE+ L E EVD E ++ EE+ ET+ SVD E E ESNI++VDEEE TQE+ +EVSKV E D SVDPNES+ NI ++ + EK ++N+D VSK DE+DHSVD N+S+P +S I E++ GE T + ++N +EV VD+ SVD NE E+ NI +++G+ N+ ++ N+ + + D SVDPNK +L+E I E+D E + VN DEVSKV+ D++ + NESE E N+ E+D Sbjct: 2557 IKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVDNIENIQTDYVKSEELK-ADETEYSVDQIERESAESNIDEVDEEEITQEKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIE-GEITHK-KINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVD 2844 HSP 18 Score: 124.405 bits (311), Expect = 2.374e-31 Identity = 115/243 (47.33%), Postives = 158/243 (65.02%), Query Frame = 1 Query: 178 ISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNV-----LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVE 888 ++E NL ++ + + D SVD E+ E+ INK+DEE Q+Q+ EEV KV E + ++PN S+ +HNI KV+E+ KKQ +QINL+ V+ +DE D+SVD NE E + EV + E Q ++VNSEE S +D+T HSVD NESELA NI ++D+GE L+QVN + TDHS +PN+ +LAE NI VD + E+VN DEVSKVD D+ VD NESE E N+ ++DE E Sbjct: 1310 VNETFNLYVMTKMDQKDNSVDPYESAHIEAKINKIDEETIKQKQVNLEEVPKVDETEEFINPNRSELADHNIIKVEEETKKQ-EQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGE 1551 HSP 19 Score: 67.0106 bits (162), Expect = 4.744e-12 Identity = 75/215 (34.88%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 22 NINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLIS-EEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEK-KQHKQI--NLDVSKLDETDHSVDTNESKPVES-------NIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQN 633 N+ EVDK ++ Q + +LEE+S VD+ HSA+ NES+L E NI EVD GE N +Q V+ NE+ P E N N+VD E Q + ++ EE S V + D VDP ES F + ++ KV E EK K QI + DV + + V N +E+ N+I ++D + + +S+E D+ + VD+ +E N N Sbjct: 3721 NVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQ---------------VNPNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSEGEKNKAETQIVKSTDVDTI-FVQNDVKENSKMYIENAQILASPNVISINDNKVDVKTNESSKEEIASDEDWIKVDEESTEKTNSN 3919 HSP 20 Score: 64.3142 bits (155), Expect = 3.680e-11 Identity = 108/336 (32.14%), Postives = 161/336 (47.92%), Query Frame = 1 Query: 133 LAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNEN-------------EPTESNINKVDEEE--------------------TTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDV-SKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEK-----NILDQVNV----------------------------------------LYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNXXXXXXXXXXXXXXXTNESELCEPNVIEIDEVEKNISE 903 L EQ+I E+ V ++ DN +S + + ++ EN P E+ I +DE+E T + ISE K+ + + + E I K+ E+ + ++ NL V +K+D+ D+SVD ES +E+ I ++D+ E +Q+QVN EEV VD+T ++ N SELA+ NIIK+++ K N+ + NV L +TDHSVD N+ +LAE NI+EVD GE KQ EQVNS+EVS VD+ D S + NE EL E N+I +D ++NISE Sbjct: 1184 LYEQDI-EIQVSDKETLTSDNTSPLSELNIESEAQEVIENNAQTNDKDKALLKRPIENII--LDEQEDLNNLHLEIIKDSSPGNNEDTEKSADISESNDKIHVRVEKHEKRADNLNETQINKLGENVDQVNETFNLYVMTKMDQKDNSVDPYESAHIEAKINKIDE-ETIKQKQVNLEEVPKVDETEEFINPNRSELADHNIIKVEEETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISE 1515 The following BLAST results are available for this feature:
BLAST of SMED30007031 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30007031 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30007031 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30007031 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30007031 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007031 ID=SMED30007031|Name=SMED30007031|organism=Schmidtea mediterranea sexual|type=transcript|length=904bpback to top protein sequence of SMED30007031-orf-1 >SMED30007031-orf-1 ID=SMED30007031-orf-1|Name=SMED30007031-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=301bp ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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