SMED30006886

Overview
NameSMED30006886
Smed IDSMED30006886
Length (bp)2976
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30006886 (SMED30006886) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30006886 (SMED30006886) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30006886 (SMED30006886) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30006886 (SMED30006886) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30006886

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 9

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30006886SMESG000024489.1 dd_Smed_v4_5366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30006886SMESG000052241.1 SMESG000052069.1 SMESG000040582.1 SMESG000025545.1 SMESG000071376.1 SMESG000055178.1 SMESG000044360.1 SMESG000025547.1 SMESG000024583.1 SMESG000021657.1 SMESG000009751.1 SMESG000005594.1 Contig14068uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30006886SMESG000052241.1 SMESG000052069.1 SMESG000040582.1 SMESG000025545.1 SMESG000071376.1 SMESG000055178.1 SMESG000044360.1 SMESG000025547.1 SMESG000024583.1 SMESG000021657.1 SMESG000009751.1 SMESG000005594.1 Contig14068newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30006886 vs. Ensembl Zebrafish
Match: CR925755.2 (pep chromosome:GRCz11:17:42486740:42492668:-1 gene:ENSDARG00000116402.1 transcript:ENSDART00000183946.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR925755.2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.597e-22
Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = -3 
Query: 1496 IIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS--------KYKRTIQ---------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAI 2011
            II+  +SP       VK K+  LR C+D+R LN+IT +  +P+P ++     L GA +F+ +DL NAY+ V +      K  F            P  LSN             Q L  +    VL ++  +F  VYLDDILIFS          +R +Q         K  KC      V+FLGHT++  G+  D  KIQA+
Sbjct:  525 IIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAV--------FQALVND----VLRDMIDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHTVSVEGMRMDPEKIQAV 715

HSP 2 Score: 43.5134 bits (101), Expect = 2.597e-22
Identity = 19/45 (42.22%), Postives = 29/45 (64.44%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            KA++ FLG  N+YR+FI+++ +LA  L +L  S+K    WS   E
Sbjct:  725 KALQRFLGFANFYRRFIRNFRQLAAPLTNLT-SSKTPFRWSNAAE 768
[Close]
BLAST of SMED30006886 vs. Ensembl Zebrafish
Match: BX546500.1 (pep chromosome:GRCz11:23:12926092:12931693:-1 gene:ENSDARG00000086495.3 transcript:ENSDART00000122176.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX546500.1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.396e-22
Identity = 65/203 (32.02%), Postives = 92/203 (45.32%), Query Frame = -3 
Query: 1496 IIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS--------KYKRTIQ---------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAI 2011
            II+  +SP       VK K+  LR C+D+R LN+IT +  +P+P ++     L GA +F+ +DL NAY+ V +      K  F            P  LSN             Q L  +    VL ++  +F  VYLDDILIFS          +R +Q         K  KC      V+FLGH ++  G+  D  KIQA+
Sbjct:  526 IIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAV--------FQALVND----VLRDMIDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAV 716

HSP 2 Score: 45.0542 bits (105), Expect = 4.396e-22
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            KA++ FLG  N+YR+FI+++++LA  L SL  S+K    WS   E
Sbjct:  726 KALQRFLGFANFYRRFIRNFSQLAAPLTSLT-SSKMPFRWSSAAE 769
[Close]
BLAST of SMED30006886 vs. Ensembl Zebrafish
Match: BX511082.1 (pep chromosome:GRCz11:9:14291932:14297132:1 gene:ENSDARG00000113678.1 transcript:ENSDART00000183119.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511082.1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.648e-21
Identity = 65/203 (32.02%), Postives = 91/203 (44.83%), Query Frame = -3 
Query: 1496 IIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS--------KYKRTIQ---------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAI 2011
            II+  +SP       VK K+  LR C+D+R LN IT +  +P+P ++     L GA +F+ +DL NAY+ V + E    K  F            P  LSN             Q L  +    VL ++  +F  VYLDDILIFS          +R +Q         K  KC      V FLGH ++  G+  D  K+QA+
Sbjct:  552 IIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNAITVKNTYPLPLMSSAFERLQGASFFTKLDLRNAYHLVRIREGDEWKTAFNTPRGHFEYCVLPFGLSNAPAV--------FQALVND----VLRDMLDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVPFLGHIVSVEGMRMDPEKVQAV 742

HSP 2 Score: 41.5874 bits (96), Expect = 1.648e-21
Identity = 18/45 (40.00%), Postives = 29/45 (64.44%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            KA++ FLG  N+YR+FI+++++LA  L +L  S K    WS   +
Sbjct:  752 KALQRFLGFANFYRRFIRNFSQLAAPLTALT-SLKTPFRWSNAAQ 795
[Close]
BLAST of SMED30006886 vs. Ensembl Zebrafish
Match: BX511224.1 (pep chromosome:GRCz11:2:18017000:18022765:1 gene:ENSDARG00000113243.1 transcript:ENSDART00000186877.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511224.1)

HSP 1 Score: 79.337 bits (194), Expect = 1.662e-21
Identity = 65/203 (32.02%), Postives = 92/203 (45.32%), Query Frame = -3 
Query: 1496 IIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS--------KYKRTIQ---------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAI 2011
            II+  +SP       VK K+  LR C+D+R LN+IT +  +P+P ++     L GA +F+ +DL NAY+ V +      K  F            P  LSN             Q L  +    VL ++  +F  VYLDDILIFS          +R +Q         K  KC      V+FLGH ++  G+  D  KIQA+
Sbjct:  552 IIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVCIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAV--------FQALVND----VLRDMIDQFIYVYLDDILIFSHSLQEHIQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAV 742

HSP 2 Score: 44.669 bits (104), Expect = 1.662e-21
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            KA++ FLG  N+YR+FI ++++LA  L SL  S+K    WS   E
Sbjct:  752 KALQRFLGFANFYRRFIHNFSQLAAPLTSLT-SSKTPFRWSSAAE 795
[Close]
BLAST of SMED30006886 vs. Ensembl Zebrafish
Match: CR855320.1 (pep chromosome:GRCz11:1:7956030:7961696:1 gene:ENSDARG00000099359.2 transcript:ENSDART00000159655.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR855320.1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.880e-21
Identity = 64/203 (31.53%), Postives = 90/203 (44.33%), Query Frame = -3 
Query: 1496 IIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY--------KRTIQ---------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAI 2011
            II+  +SP       VK K+  LR C+D+R LNNIT +  +P+P ++     L GA +F+ +DL NAY+ V +      K  F            P  LSN             Q    +    VL ++  +F  VYLDDILIFS          +R +Q         K  KC      V FLGH ++  G+  D  KI+A+
Sbjct:  554 IIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNNITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRAGDEWKSAFNTPRGHFEYCVLPFGLSNAPAV--------FQAFVND----VLRDMIDQFIYVYLDDILIFSHSLQEHVQHIRRVLQRLLENGLYVKAEKCVFHAQSVPFLGHIVSVEGLRMDPEKIKAV 744

HSP 2 Score: 44.669 bits (104), Expect = 2.880e-21
Identity = 19/45 (42.22%), Postives = 30/45 (66.67%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            KA++ FLG  N+YR+FI+++++LA  L +L  S+K    WS   E
Sbjct:  754 KALQRFLGFANFYRRFIRNFSQLAAPLTALT-SSKTPFRWSSAAE 797
[Close]
BLAST of SMED30006886 vs. Ensembl Xenopus
Match: anxa6 (annexin A6 [Source:Xenbase;Acc:XB-GENE-989741])

HSP 1 Score: 95.9005 bits (237), Expect = 5.145e-25
Identity = 67/211 (31.75%), Postives = 101/211 (47.87%), Query Frame = -3 
Query: 1487 KIDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKLSNISLTVCHLE*QQ--LQRLSKN**IFVLGELNCKFAIVYLDDILIFSK-YKRTIQ----------------KYRKC-TREDEVKFLGHTINKSGVTTDENKIQAIKQF 2050
            ++  QI+EM  FG+I   +SPW  P V V  K+   R C+D+R LN++T    +P+P ++ELL  L  AKY +T+DL   Y+ + L      K  F  P  L   ++    +       QRL     +  L E    FA  YLDDI +FS+ ++  +Q                K  KC     EV++LGH +    +  D  K++AI Q+
Sbjct:  352 EMKSQIDEMLAFGVITPSHSPWASPVVLVPKKDGSTRFCVDYRRLNDVTTTDAYPMPRVDELLDRLGNAKYLTTLDLSRGYWQIPLAPSAQEKSAFLTPFGLYQFTVMPFGMRNAPATFQRL-----VNRLLEGMQDFAQAYLDDIAVFSQTWEEHLQHLQRVFAQIQDAGLTLKPEKCHLAMAEVQYLGHRVGGGQLRPDPAKVEAICQW 557

HSP 2 Score: 40.4318 bits (93), Expect = 5.145e-25
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDK-LNWSETCE 1470
            K +  FLG + YYRKFI +Y+ +A+ L  L    + + + W+  CE
Sbjct:  564 KQVLAFLGTSGYYRKFIPNYSTVAKPLTDLTSRQRSRTIVWTPECE 609
[Close]
BLAST of SMED30006886 vs. Ensembl Xenopus
Match: ENSXETT00000006041.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:37317867:37322724:1 gene:ENSXETG00000003070.1 transcript:ENSXETT00000006041.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.1965 bits (217), Expect = 3.542e-21
Identity = 58/209 (27.75%), Postives = 105/209 (50.24%), Query Frame = -3 
Query: 1487 EQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PL---KLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY-----KRTIQKYRKCTRED-------------EVKFLGHTINKSGVTTDENKIQAIKQF 2041
            + + E++  GIIKE  SP+  P V V+ KN  +R+C+D+R LN  T    +  P I + L  L G+K+FS +DL + YY + +      K  F  PL   + + +   +C       QRL +      +G+++    +VYLDD+++F +      +R ++ + +  +E               V ++GH ++  G+ TD +KI+A+  +
Sbjct:  344 KHLEELKAAGIIKESRSPYASPIVVVRKKNGSIRMCVDYRTLNQRTIPDQYTTPRIEDALNCLVGSKWFSVLDLRSGYYQLPMHPEDKEKTAFICPLGFFEFNRMPQGLCGAP-ATFQRLMER----TVGDMHLLEVLVYLDDLIVFGRTLEEHEQRLLKVFDRLEKEGLKLSPEKCQFCQPSVNYVGHVVSAEGIATDPSKIEAVSSW 547

HSP 2 Score: 35.4242 bits (80), Expect = 3.542e-21
Identity = 13/34 (38.24%), Postives = 23/34 (67.65%), Query Frame = -1 
Query: 1363 IKEFLGLTNYYRKFIKDYARLARSLESLCGSNKD 1464
            ++ FLG   YYR+F+K ++++A+ L  L  SN +
Sbjct:  556 LRSFLGFCGYYRRFVKGFSKVAQPLNQLLQSNTE 589
[Close]
BLAST of SMED30006886 vs. Ensembl Xenopus
Match: ENSXETT00000034712.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:9:33567219:33572531:-1 gene:ENSXETG00000011772.1 transcript:ENSXETT00000034712.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 79.337 bits (194), Expect = 4.328e-19
Identity = 65/213 (30.52%), Postives = 100/213 (46.95%), Query Frame = -3 
Query: 1487 GKIDEQINEMERFGIIKECNSPWNRP*VCVKNKND-LRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHFPLKLSN-----ISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIF--------SKYKRTIQKYR---------KCTRE-DEVKFLGHTINKSGVTTDENKIQAIKQF 2053
              + E I+E  + G I+   SP       V+ K+  LR C+D+R LN IT +  +P+P I+EL   L GAK FS +DL  AY  + + E    K  F  +  +     +   +C+      Q    +    +  +L  K  +VYLDDILIF        S+ K  + + R         KCT E  ++ FLG+ I+  G   D  K+ AI+++
Sbjct:  534 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAP-AVFQEFVND----IFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRENFLFAKLEKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKW 741

HSP 2 Score: 36.965 bits (84), Expect = 4.328e-19
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = -1 
Query: 1408 KAIKEFLGLTNYYRKFIKDYA 1470
            KAI+ F+G  NYYR+FIKD++
Sbjct:  748 KAIQRFIGFANYYRQFIKDFS 768
[Close]
BLAST of SMED30006886 vs. Ensembl Xenopus
Match: ENSXETT00000042189.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460667.1:82848:87648:1 gene:ENSXETG00000017765.1 transcript:ENSXETT00000042189.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 79.337 bits (194), Expect = 4.475e-19
Identity = 65/213 (30.52%), Postives = 100/213 (46.95%), Query Frame = -3 
Query: 1487 GKIDEQINEMERFGIIKECNSPWNRP*VCVKNKND-LRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHFPLKLSN-----ISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIF--------SKYKRTIQKYR---------KCTRE-DEVKFLGHTINKSGVTTDENKIQAIKQF 2053
              + E I+E  + G I+   SP       V+ K+  LR C+D+R LN IT +  +P+P I+EL   L GAK FS +DL  AY  + + E    K  F  +  +     +   +C+      Q    +    +  +L  K  +VYLDDILIF        S+ K  + + R         KCT E  ++ FLG+ I+  G   D  K+ AI+++
Sbjct:  534 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAP-AVFQEFVND----IFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRENFLFAKLEKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKW 741

HSP 2 Score: 36.965 bits (84), Expect = 4.475e-19
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = -1 
Query: 1408 KAIKEFLGLTNYYRKFIKDYA 1470
            KAI+ F+G  NYYR+FIKD++
Sbjct:  748 KAIQRFIGFANYYRQFIKDFS 768
[Close]
BLAST of SMED30006886 vs. Ensembl Xenopus
Match: castor1 (cytosolic arginine sensor for mTORC1 subunit 1 [Source:Xenbase;Acc:XB-GENE-960689])

HSP 1 Score: 79.337 bits (194), Expect = 3.147e-18
Identity = 65/213 (30.52%), Postives = 100/213 (46.95%), Query Frame = -3 
Query: 1487 GKIDEQINEMERFGIIKECNSPWNRP*VCVKNKND-LRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHFPLKLSN-----ISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIF--------SKYKRTIQKYR---------KCTRE-DEVKFLGHTINKSGVTTDENKIQAIKQF 2053
              + E I+E  + G I+   SP       V+ K+  LR C+D+R LN IT +  +P+P I+EL   L GAK FS +DL  AY  + + E    K  F  +  +     +   +C+      Q    +    +  +L  K  +VYLDDILIF        S+ K  + + R         KCT E  ++ FLG+ I+  G   D  K+ AI+++
Sbjct:  534 AAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAP-AVFQEFVND----IFRDLLGKSVVVYLDDILIFSQDLETHRSQVKEALSRLRENSLFAKLDKCTFEVPKISFLGYIISSRGFEMDPAKVSAIQKW 741

HSP 2 Score: 33.8834 bits (76), Expect = 3.147e-18
Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = -1 
Query: 1408 KAIKEFLGLTNYYRKFIKDYA 1470
            KAI+ F+G  NYYR+FIK ++
Sbjct:  748 KAIQRFIGFANYYRQFIKGFS 768
[Close]
BLAST of SMED30006886 vs. UniProt/SwissProt
Match: sp|Q8I7P9|POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.753e-22
Identity = 63/225 (28.00%), Postives = 103/225 (45.78%), Query Frame = -3 
Query: 1487 GKIDEQINEMERFGIIKECNSPWNRP*VCVKNK------NDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*K------------LHFPLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKYKRTIQKYRKCT------------------REDEVKFLGHTINKSGVTTDENKIQAIKQF 2053
            G+++ QI+E+ + GII+  NSP+N P   V  K         R+ +DF+ LN +T    +PIP+IN  L +L  AKYF+T+DL + ++ + ++E    K            L  P  L N             QR+  +    +L E   K   VY+DDI++FS+   T  K  +                     + +V+FLG+ +   G+  D  K++AI + 
Sbjct:  137 GEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAI--------FQRMIDD----ILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEM 349

HSP 2 Score: 43.8986 bits (102), Expect = 1.753e-22
Identity = 18/30 (60.00%), Postives = 26/30 (86.67%), Query Frame = -1 
Query: 1381 KAIKEFLGLTNYYRKFIKDYARLARSLESL 1470
            K +K FLG+T+YYRKFI+DYA++A+ L +L
Sbjct:  356 KELKRFLGMTSYYRKFIQDYAKVAKPLTNL 385
[Close]
BLAST of SMED30006886 vs. UniProt/SwissProt
Match: sp|P20825|POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.981e-22
Identity = 70/224 (31.25%), Postives = 105/224 (46.88%), Query Frame = -3 
Query: 1487 KIDEQINEMERFGIIKECNSPWNRP*VCVKNKNDL------RICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS----KYKRTIQ-------------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2050
            +++ Q+ EM   G+I+E NSP+N P   V  K D       R+ +D+R LN IT    +PIPN++E+L  L   +YF+TIDL   ++ +E++E    K  F            P  L N   T         QR   N    +L  L  K  +VYLDDI+IFS    ++  +IQ             +  KC   + E  FLGH +   G+  +  K++AI  +
Sbjct:  221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPAT--------FQRCMNN----ILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSY 432

HSP 2 Score: 40.0466 bits (92), Expect = 1.981e-22
Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = -1 
Query: 1354 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLN 1470
            K I+ FLGLT YYRKFI +YA +A+ + S C   + K++
Sbjct:  439 KEIRAFLGLTGYYRKFIPNYADIAKPMTS-CLKKRTKID 476
[Close]
BLAST of SMED30006886 vs. UniProt/SwissProt
Match: sp|P04323|POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.978e-21
Identity = 69/224 (30.80%), Postives = 101/224 (45.09%), Query Frame = -3 
Query: 1487 KIDEQINEMERFGIIKECNSPWNRP*VCVKNKND------LRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS---------------KYKRTIQKYR--KCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2050
            +++ QI +M   GII+  NSP+N P   V  K D       RI +D+R LN IT     PIPN++E+L  L    YF+TIDL   ++ +E++     K  F            P  L N   T         QR   +    +L  L  K  +VYLDDI++FS               K  +   K +  KC   + E  FLGH +   G+  +  KI+AI+++
Sbjct:  222 EVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPAT--------FQRCMND----ILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKY 433

HSP 2 Score: 38.1206 bits (87), Expect = 9.978e-21
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -1 
Query: 1390 KAIKEFLGLTNYYRKFIKDYARLARSL 1470
            K IK FLGLT YYRKFI ++A +A+ +
Sbjct:  440 KEIKAFLGLTGYYRKFIPNFADIAKPM 466
[Close]
BLAST of SMED30006886 vs. UniProt/SwissProt
Match: sp|P10401|POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.614e-19
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = -3 
Query: 1481 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-------DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK----YKRTIQKYRKC------------TR--EDEVKFLGHTINKSGVTTDENKIQAIKQFKD 2047
            ++ ++ ++ + GII+   SP+N P   V  K        + R+ +DFR LN  T    +P+P+I  +L  L  AK+F+T+DL + Y+ + L EH   K  F            P  L N S           QR   +    VL E   K   VY+DD++IFS+    + R I    KC            TR  ++ V++LG  ++K G  +D  K++AI+++ +
Sbjct:  197 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNAS--------SIFQRALDD----VLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPE 410

HSP 2 Score: 37.3502 bits (85), Expect = 4.614e-19
Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = -1 
Query: 1381 VYKAIKEFLGLTNYYRKFIKDYARLARSLESL 1476
            VYK ++ FLGL +YYR FIKD+A +AR +  +
Sbjct:  414 VYK-VRSFLGLASYYRVFIKDFAAIARPITDI 444
[Close]
BLAST of SMED30006886 vs. UniProt/SwissProt
Match: sp|Q99315|YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.674e-14
Identity = 59/205 (28.78%), Postives = 86/205 (41.95%), Query Frame = -3 
Query: 1487 IKECNSPWNRP*VCVKNKND-LRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS-----------------KYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2008
            I    SP + P V V  K+   R+C+D+R LN  T    FP+P I+ LL  +  A+ F+T+DL + Y+ + +E     K  F            P  L N   T         + L              +F  VYLDDILIFS                 K +  I K +KC    +E +FLG++I    +   ++K  AI+ F
Sbjct:  625 IVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--------------RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 815

HSP 2 Score: 35.039 bits (79), Expect = 1.674e-14
Identity = 16/43 (37.21%), Postives = 28/43 (65.12%), Query Frame = -1 
Query: 1345 KAIKEFLGLTNYYRKFIKDYARLARSLE-SLCGSNKDKLNWSE 1470
            K  + FLG+ NYYR+FI + +++A+ ++  +C    DK  W+E
Sbjct:  822 KQAQRFLGMINYYRRFIPNCSKIAQPIQLFIC----DKSQWTE 860
[Close]
BLAST of SMED30006886 vs. TrEMBL
Match: A0A5S6Q3S4 (Uncharacterized protein OS=Trichuris muris OX=70415 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.793e-30
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = -3 
Query: 1487 INEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY----------------KRTIQ-KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2035
            +N M + G+I++ + PW+ P V    K+  LR C+D+R LN +TE+ + P+P I++ L  L G+ +FST+DL + Y+ VE+E     K  F            P  L N   T         QRL +     VL  L  +  +VYLDDI++F++                 K  ++ K  KC     EV FLGHTI+ +G+ TD +K  A++++
Sbjct:  527 VNRMLQQGVIEQASGPWSFPVVLAPKKDGSLRFCVDYRKLNEVTEKNVQPLPRIDDALDALAGSSWFSTLDLASGYWQVEVEARDRPKTAFSTPSGLYQFRVMPFGLCNAPAT--------FQRLMEK----VLEGLQWRTCLVYLDDIIVFARTPIEQMQRLDEVLNRLQKAGLKLKPSKCKIMTTEVVFLGHTISANGIATDASKCAAVERW 728

HSP 2 Score: 42.3578 bits (98), Expect = 7.793e-30
Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = -1 
Query: 1333 IKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCEH 1464
            +++FLGL +YYRKF+K++A +A  L  L   +  K  W++ CE 
Sbjct:  737 LRQFLGLASYYRKFVKNFATIAAPLHRLLRKDS-KWVWNQDCEQ 779

HSP 3 Score: 35.039 bits (79), Expect = 7.793e-30
Identity = 52/190 (27.37%), Postives = 81/190 (42.63%), Query Frame = -2 
Query: 2061 GAKISVIDKSLLQKFGI----RNLEKFYVKLRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNI-------MLKIGSTTSNNKSE-------------------INKLTDMAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILT-SGKPIVINPSDSP 2537
            GA +S++D  LL   GI    R L+   +++  A  S ++I G   V V I G   +K    +      P +IG  DFL+           +L+IGS     KSE                    +++ D    K+   Q     ++K L KY  +      D+G+T+++ HEI T + KPI I P  +P
Sbjct:  331 GAAVSLMDYKLL---GILQPARLLDVRNIRVLTATGSEMKIAGTCTVDVSIGGAPAKKHTVLVAHGLTCPCLIGA-DFLRRHGCVIDFTTGILQIGSYDVELKSESGNDRTIALIGPAQRELGSCDEVIDAMCSKSTAPQEVLVPLRKTLSKYRDVISMTDDDLGRTSVVRHEIRTGNAKPIKIGPRRTP 516

HSP 4 Score: 80.1073 bits (196), Expect = 2.400e-12
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 1 
Query:  523 FEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSLIDSSER 843
            F+ + +DF GPL T+  GK+Y+ A+ D F+++    A       T    +I  +I +FG P+ VH D G+ FE     EL +  D+K   ++PYH  +N L++   R
Sbjct: 1092 FQRVGIDFLGPLPTTTNGKRYVLAVCDYFTKWTEAYATENMEATTVAKLLIDNYITRFGPPESVHSDQGRNFEALLMTELFRLLDVKKTRTTPYHPQSNGLVERFNR 1198

HSP 5 Score: 23.483 bits (49), Expect = 2.400e-12
Identity = 16/50 (32.00%), Postives = 24/50 (48.00%), Query Frame = 3 
Query:  837 RTIRDYLNASLKDKKHND*PDILPEIEFTLNATIQKSTDKTPAEIIFGHK 986
            RT+ D L A  KD       D+LP   F  N +  ++T  +P   +FG +
Sbjct: 1198 RTLLDTLAALAKDFPDRW-DDMLPWATFAYNTSNHETTGISPFLALFGRE 1246
[Close]
BLAST of SMED30006886 vs. TrEMBL
Match: A0A5S6QK48 (Uncharacterized protein OS=Trichuris muris OX=70415 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.055e-29
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = -3 
Query: 1487 INEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY----------------KRTIQ-KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2035
            +N M + G+I++ + PW+ P V    K+  LR C+D+R LN +TE+ + P+P I++ L  L G+ +FST+DL + Y+ VE+E     K  F            P  L N   T         QRL +     VL  L  +  +VYLDDI++F++                 K  ++ K  KC     EV FLGHTI+ +G+ TD +K  A++++
Sbjct:  527 VNRMLQQGVIEQASGPWSFPVVLAPKKDGSLRFCVDYRKLNEVTEKNVQPLPRIDDALDALAGSSWFSTLDLASGYWQVEVEARDRPKTAFSTPSGLYQFRVMPFGLCNAPAT--------FQRLMEK----VLEGLQWRTCLVYLDDIIVFARTPIEQMQRLDEVLNRLQKAGLKLKPSKCKIMTTEVVFLGHTISANGIATDASKCAAVERW 728

HSP 2 Score: 40.817 bits (94), Expect = 1.055e-29
Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = -1 
Query: 1333 IKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCEH 1464
            +++FLGL +YYRKF+K++A +A  L  L   +  K  W++ CE 
Sbjct:  737 LRQFLGLASYYRKFVKNFATIAAPLHRLLRKDS-KWVWNQDCEQ 779

HSP 3 Score: 35.4242 bits (80), Expect = 1.055e-29
Identity = 52/190 (27.37%), Postives = 81/190 (42.63%), Query Frame = -2 
Query: 2061 GAKISVIDKSLLQKFGI----RNLEKFYVKLRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNI-------MLKIGSTTSNNKSE-------------------INKLTDMAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILT-SGKPIVINPSDSP 2537
            GA +S++D  LL   GI    R L+   +++  A  S ++I G   V V I G   +K    +      P +IG  DFL+           +L+IGS     KSE                    +++ D    K+   Q     ++K L KY  +      D+G+T+++ HEI T + KPI I P  +P
Sbjct:  331 GAAVSLMDYKLL---GILQPARLLDVRNIRVLTATGSEMKIAGTCTVDVSIGGAPAKKHTVLVAHGLTCPCLIGA-DFLRRHGCVIDFTTGILQIGSYDVELKSESGNDRTIALIGPAQRELGSCDEVIDAMCSKSTAPQEVLVPLRKTLSKYRDVISMTDDDLGRTSVVRHEIRTGNAKPIKIGPRRTP 516
[Close]
BLAST of SMED30006886 vs. TrEMBL
Match: A0A164P0I2 (Uncharacterized protein (Fragment) OS=Daphnia magna OX=35525 GN=APZ42_030153 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.913e-29
Identity = 74/218 (33.94%), Postives = 109/218 (50.00%), Query Frame = -3 
Query: 1487 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK----YKRTIQKY-------------RKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2047
            I+E++ EM R GII+   SPW+ P V V+ K+ D R C+D+R LN +T+R ++P+P ++++   L GAK FS++DL + Y+ V + +    K  F            P  L+N   T         QRL       VLG L  K  +VYLDDIL+F K    ++  +Q+              RKC      VK LGH I+  G+  D  K+ A+  F
Sbjct:   47 INEKVGEMLRDGIIQPSQSPWSSPVVLVRKKSGDHRFCVDYRRLNAVTKRDVYPLPRMDDVFDCLAGAKIFSSLDLASGYWQVSVADSDRYKTAFVTPDGLFEFKRLPFGLANAPAT--------FQRLMDR----VLGRLKWKMCLVYLDDILVFGKTFGEHQERLQQVLVALEKANLTLNLRKCVFGTSRVKHLGHVISGEGICPDPEKVSALTDF 252

HSP 2 Score: 44.669 bits (104), Expect = 1.913e-29
Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = -1 
Query: 1336 KYKQLNNLKT*VYKAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1509
            K   L +      K+++ FLGL ++YRKFI D+A +A  L +L   N  + +W ET E
Sbjct:  245 KVSALTDFPVNNVKSLRAFLGLASFYRKFIADFAAIAHPLHALLKKNA-RWDWGETQE 301
[Close]
BLAST of SMED30006886 vs. TrEMBL
Match: A0A3B3H3G3 (Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.914e-29
Identity = 70/214 (32.71%), Postives = 117/214 (54.67%), Query Frame = -3 
Query: 1472 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS---------------KYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFKDVSV 2047
            + + IN++   G+I+E NSP+  P V  + K+  LR+C+D+R LN+ T R  FP+P I+E L  L+GA++F+T+DL + Y  V + E    K  F  P  L   + +   +C+      QRL +     + G+  C+  ++YLDDI++FS               + ++   K  KC   + EV++LGH I+  GV+TD +KI+A+  ++  S 
Sbjct:  329 VKDHINQLLASGVIRESNSPYASPIVLARKKDGSLRMCVDYRQLNSKTRRDAFPLPPIDESLDALSGARWFTTLDLASGYNQVPVTEGDRAKTAFCTPFGLFEWNRMPFGLCNAP-GTFQRLMQR----IFGDQQCQSVLLYLDDIVVFSSTIDEHLERLVLGRLQQEKLRVKLPKCAFFQQEVRYLGHVISDQGVSTDPHKIEAVAGWQPPST 537

HSP 2 Score: 36.965 bits (84), Expect = 1.914e-29
Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = -1 
Query: 1375 IKEFLGLTNYYRKFIKDYARLARSLESLCG 1464
            ++ FLG  +YYR+F++ +ARLA  L  L G
Sbjct:  541 LRTFLGFASYYRRFVEGFARLAAPLHRLVG 570

HSP 3 Score: 27.7202 bits (60), Expect = 1.914e-29
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 
Query: 2106 FMKHKWDVGKTTLLTHEI 2159
            F  H+ D+G TTL+THEI
Sbjct:  289 FAAHEGDLGCTTLMTHEI 306

HSP 4 Score: 65.855 bits (159), Expect = 5.923e-7
Identity = 35/126 (27.78%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            C  CQ  K  +      +    A R  E++ MDF   L+ S  G + +  + D FS+Y        Q   T    ++ +W  KFG P  +H D G++FE    ++L   + I+   ++PYH + N 
Sbjct:  909 CERCQLAKDNSRSHSAPLGHLIASRPNELVAMDFTI-LEPSRTGVENVLVLTDVFSKYTVAIPTRDQRAATVAKVLVAEWFSKFGVPARLHSDQGRSFESQLIQQLRGLYGIEKSRTTPYHPAGNG 1033
[Close]
BLAST of SMED30006886 vs. TrEMBL
Match: A0A5S6PYL2 (Uncharacterized protein OS=Trichuris muris OX=70415 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.260e-29
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = -3 
Query: 1487 INEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY----------------KRTIQ-KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2035
            +N M + G+I++ + PW+ P V    K+  LR C+D+R LN +TE+ + P+P I++ L  L G+ +FST+DL + Y+ VE+E     K  F            P  L N   T         QRL +     VL  L  +  +VYLDDI++F++                 K  ++ K  KC     EV FLGHTI+ +G+ TD +K  A++++
Sbjct:  226 VNRMLQQGVIEQASGPWSFPVVLAPKKDGSLRFCVDYRKLNEVTEKNVQPLPRIDDALDALAGSSWFSTLDLASGYWQVEVEARDRPKTAFSTPSGLYQFRVMPFGLCNAPAT--------FQRLMEK----VLEGLQWRTCLVYLDDIIVFARTPIEQMQRLDEVLNRLQKAGLKLKPSKCKIMTTEVVFLGHTISANGIATDASKCAAVERW 427

HSP 2 Score: 41.2022 bits (95), Expect = 2.260e-29
Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = -1 
Query: 1333 IKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCEH 1464
            +++FLGL +YYRKF+K++A +A  L  L   +  K  W++ CE 
Sbjct:  436 LRQFLGLASYYRKFVKNFATIAAPLHRLLRKDS-KWVWNQDCEQ 478

HSP 3 Score: 35.039 bits (79), Expect = 2.260e-29
Identity = 52/195 (26.67%), Postives = 83/195 (42.56%), Query Frame = -2 
Query: 2046 GAKISVIDKSLLQKFGI----RNLEKFYVKLRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNI-------MLKIGSTTSNNKSE-------------------INKLTDMAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILT-SGKPIVINPSDSPLIRKN 2537
            GA +S++D  LL   GI    R L+   +++  A  S ++I G   V V I G   +K    +      P +IG  DFL+           +L+IGS     KSE                    +++ D    K+   Q     ++K L KY  +      D+G+T+++ HEI T + KPI I P  +P   ++
Sbjct:   30 GAAVSLMDYKLL---GILQPARLLDVRNIRVLTATGSEMKIAGTCTVDVSIGGAPAKKHTVLVAHGLTCPCLIGA-DFLRRHGCVIDFTTGILQIGSYDVELKSESGNDRTIALIGPAQRELGSCDEVIDAMCSKSTAPQEVLVPLRKTLSKYRDVISMTDDDLGRTSVVRHEIRTGNAKPIKIGPRRTPYRHRS 220

HSP 4 Score: 79.7221 bits (195), Expect = 3.622e-12
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 1 
Query:  523 FEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSLIDSSER 843
            F+ + +DF GPL T+  GK+Y+ A+ D F+++    A       T    +I  +I +FG P+ VH D G+ FE     EL +  D+K   ++PYH  +N L++   R
Sbjct:  791 FQRVGIDFLGPLPTTTNGKRYVLAVCDYFTKWTEAYATENMEATTVAKLLIDNYITRFGPPESVHSDQGRNFEALLMTELFRLLDVKKTRTTPYHPQSNGLVERFNR 897

HSP 5 Score: 23.0978 bits (48), Expect = 3.622e-12
Identity = 16/50 (32.00%), Postives = 24/50 (48.00%), Query Frame = 3 
Query:  837 RTIRDYLNASLKDKKHND*PDILPEIEFTLNATIQKSTDKTPAEIIFGHK 986
            RT+ D L A  KD       D+LP   F  N +  ++T  +P   +FG +
Sbjct:  897 RTLLDTLAALAKDFPDRW-DDMLPWATFAYNTSNHETTGISPFLALFGRE 945
[Close]
BLAST of SMED30006886 vs. Ensembl Cavefish
Match: ENSAMXT00000035136.1 (pep primary_assembly:Astyanax_mexicanus-2.0:19:22120237:22124307:1 gene:ENSAMXG00000032783.1 transcript:ENSAMXT00000035136.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 112.464 bits (280), Expect = 1.257e-30
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = -3 
Query: 1487 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK----YKRTIQKYRKCTRE--------------DEVKFLGHTINKSGVTTDENKIQAIKQF 2047
            + + + E+   GII+E  SP++ P V V+ KN D+R+C+D+R LN  T +  + +PN+ E   TL G+K+FS +DL + YY VE+EE    K  F            P  ++N   T         QRL +      +GE+N K  +V+LDD++IFSK    ++  + K   C +E                V++LGH ++++GV TD +KI A+K +
Sbjct:  130 VRKHLKELSDAGIIRESESPFSSPIVVVRKKNGDVRLCVDYRKLNLQTIKDAYALPNLEETFATLTGSKWFSVLDLKSGYYQVEMEEDDKPKTAFVCPLGFWEWNRLPQGITNAPST--------FQRLMER----CVGEMNLKEVLVFLDDLIIFSKSLEEHEERLLKVLNCLKEYGLKLSPEKCKFFQTSVRYLGHIVSENGVKTDPDKIAALKNW 335

HSP 2 Score: 41.9726 bits (97), Expect = 1.257e-30
Identity = 20/67 (29.85%), Postives = 35/67 (52.24%), Query Frame = -1 
Query: 1333 KAIKEFLGLTNYYRKFIKDYARLARSLESLCG-------------SNKDKLN--------WSETCEH 1470
            K ++ FLG + YYR+F+KDY+++A+ L +L               +NK+ LN        W+ +C+ 
Sbjct:  342 KELRSFLGFSGYYRRFVKDYSKIAKPLNALTSGYPPQRKGAKKPETNKNYLNPKEPFQGRWTASCQQ 408

HSP 3 Score: 52.7582 bits (125), Expect = 1.096e-8
Identity = 30/127 (23.62%), Postives = 56/127 (44.09%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSL 825
            C  C + KA+  K    ++     R  E++ +DF   ++   +  K +  + D F++Y        Q  +T    +   +++ +G P+ +H D G  FE    KEL     ++   +SPYH   N +
Sbjct:  758 CGRCVRRKALPDKAA-PLVNILTTRPLELVCIDFLS-IEPDSKNTKDVLVITDHFTKYAIAVPTPNQKARTVAKCLWDTFVVHYGLPERLHSDQGPDFESTLIKELCALVGVRKCRTSPYHPRGNPV 882

HSP 4 Score: 27.335 bits (59), Expect = 1.096e-8
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 3 
Query:  837 RTIRDYLNASLKDKKHND*PDILPEIEFTLNATIQKSTDKTPAEIIFGHK 986
            RT+ + L  +LKDK+ +   D +  +    N T  + T  TP E++FG +
Sbjct:  887 RTLLNML-GTLKDKEKSHWSDFVKSLVHAYNCTKNEVTGFTPYELMFGRR 935
[Close]
BLAST of SMED30006886 vs. Ensembl Cavefish
Match: ENSAMXT00000034038.1 (pep primary_assembly:Astyanax_mexicanus-2.0:14:3120146:3124090:1 gene:ENSAMXG00000040885.1 transcript:ENSAMXT00000034038.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 108.227 bits (269), Expect = 4.916e-29
Identity = 74/212 (34.91%), Postives = 110/212 (51.89%), Query Frame = -3 
Query: 1484 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKLSNISLTVCHLE*QQ--LQRLSKN**IFVLGELNCKFAIVYLDDILIFSK------------YKRTIQKY------RKC-TREDEVKFLGHTINKSGVTTDENKIQAIKQFK 2047
            + + I EME  G+I+   SP+  P V V  K+  LRIC+D+R LN+ + R  FP+P + E L  L  AKYFST+DL + Y+ VE+ E    K  F  P+ L   +     L+      QRL         G+LN +  ++YLDDI+IFS+            + R ++KY      +KC     EV +LGH ++  G+ TD +KI  +  +K
Sbjct:  254 VRKAITEMEEAGVIRPSKSPYASPIVVVTKKDGSLRICMDYRKLNSCSTRDAFPLPRVEEALEALGEAKYFSTLDLTSGYWQVEVAEADKHKTAFSTPMGLFEANRMPFGLQNSPSTFQRLM----TCCFGDLNFESLLIYLDDIVIFSRTFDEHLERLQMVFDR-LRKYGLKLKPQKCHLLRREVLYLGHVVSSDGIKTDPDKISKVAGWK 460

HSP 2 Score: 33.4982 bits (75), Expect = 4.916e-29
Identity = 18/55 (32.73%), Postives = 24/55 (43.64%), Query Frame = -1 
Query: 1336 EFLGLTNYYRKFIKDYARLARSLESLCGSNKDK--------------LNWSETCE 1458
            +FLG   YYR+FI+ YA +A  L  L   +  K                W+E CE
Sbjct:  470 QFLGFAGYYRRFIEGYASIAAPLYRLTSGDPRKKKRGRKGPPAVGLPFIWTEECE 524

HSP 3 Score: 27.335 bits (59), Expect = 4.916e-29
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = -2 
Query: 2049 FMKHKWDVGKTTLLTHEI-LTSGKPI-----VINPSDSPLIRK 2159
            F KH  D G TT++ HEI L   +P       I PS    +RK
Sbjct:  214 FSKHHLDYGHTTVVKHEIPLVDPRPFRLPYRKIPPSQYQAVRK 256

HSP 4 Score: 55.8398 bits (133), Expect = 2.859e-7
Identity = 35/135 (25.93%), Postives = 56/135 (41.48%), Query Frame = 1 
Query:  439 DNCLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSLIDSSER 843
            + C  C   K  T   +  ++        E+I +DF   ++ S  G + I  + D FSR+        Q  +T    +   +  KFG P  +H D G+ FE    KEL +    +  ++SPYH   N   +   R
Sbjct:  853 EQCERCCLRKTPTAGLRAPLVSIHTNAPLELICIDFLT-VEKSKGGFENILVVTDHFSRWAQAYPTKDQKAETVAKVLWKNFFCKFGFPAKLHADQGRNFESTVVKELCRLTGTQKSHTSPYHPQGNGTTERFNR 986
[Close]
BLAST of SMED30006886 vs. Ensembl Cavefish
Match: ENSAMXT00000038088.1 (pep primary_assembly:Astyanax_mexicanus-2.0:23:13869500:13874588:-1 gene:ENSAMXG00000037864.1 transcript:ENSAMXT00000038088.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 103.219 bits (256), Expect = 1.860e-28
Identity = 69/208 (33.17%), Postives = 109/208 (52.40%), Query Frame = -3 
Query: 1487 INEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKLSN---ISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK------------YKRTIQKYRKCTRED-------EVKFLGHTINKSGVTTDENKIQAIKQF 2035
            + +M   G+I E +SPW  P V V+ K+   R C+D+R LN +T +  FP+P I E L TL  A++F+T+DL + Y+ V +      K  F  PL L +   +   +C+      QRL ++    + G++  +F  VYLDDI+I S             ++R + +Y    R D       +VKFLGH +NK GV  D  K+ A++++
Sbjct:  357 LADMLDKGVISESSSPWAAPVVMVRKKDGSWRFCVDYRKLNAVTHKDAFPLPRIEETLTTLTQAEWFTTLDLASGYWQVGVHPDDQPKTAFATPLGLYHFRRMPFGLCNAP-ATFQRLMQH---CLRGQV-AEFLFVYLDDIIIHSADFSLHVQHLEQVFER-LSRYGLKLRSDKCKLFRRQVKFLGHVVNKQGVHPDPEKVAAVQEW 558

HSP 2 Score: 43.8986 bits (102), Expect = 1.860e-28
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLC-------GSNKDKLNWSETCE 1470
            + ++ FLGL  YYR+FI  +A+LAR L SL         S+   +NW+  C+
Sbjct:  565 REVRAFLGLAGYYRRFIDGFAKLARPLNSLLVGVPVNRKSSHRGINWTPECQ 616

HSP 3 Score: 50.0618 bits (118), Expect = 1.205e-8
Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 1 
Query:  523 FEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSLID 831
             E++ +DF   L  S    + I   ID F+RY        Q  +TTV  +    I  FG P   H D G  FE   F++L + + I    ++ YH + N  ++
Sbjct:  910 LEVLALDFLS-LGRSNDTYQNILVAIDMFTRYAWAIPTRDQTAQTTVKALWSHVIQTFGCPLRFHSDRGPNFESALFQQLCEVYGITRSRTTSYHPAGNGRVE 1011

HSP 4 Score: 29.6462 bits (65), Expect = 1.205e-8
Identity = 13/42 (30.95%), Postives = 24/42 (57.14%), Query Frame = 3 
Query:  864 SLKDKKHND*PDILPEIEFTLNATIQKSTDKTPAEIIFGHKI 989
            +L+ +K +  P  LPE+    N T+  +T  TP+ ++FG  +
Sbjct: 1023 TLEVEKQDRWPAFLPELLQAYNNTVHSATGFTPSYLMFGRVV 1064
[Close]
BLAST of SMED30006886 vs. Ensembl Cavefish
Match: ENSAMXT00000054230.1 (pep primary_assembly:Astyanax_mexicanus-2.0:14:19483082:19487098:1 gene:ENSAMXG00000038338.1 transcript:ENSAMXT00000054230.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 103.99 bits (258), Expect = 5.303e-28
Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = -3 
Query: 1484 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIF-SKYKRTIQ----------------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFK 2047
            +   I+++    +++E +SP+  P V VK K+  LR+C+D+R LN+ T +  FP+P I E L  L+GA++FST+DL + Y  V + E    K  F  P  L   + +   +C+      QRL +     + G+   +  ++YLDDI++F S   + +Q                K  KC   + EV +LGH I+  GV+TD  KI+A+ Q++
Sbjct:  315 VKAHIDQLLEAQVVRESSSPYASPIVLVKKKDGSLRMCVDYRLLNSKTRKDAFPLPRIEESLDALSGARWFSTLDLASGYNQVPVAEQDKPKTAFCTPFGLFEWNRMPFGLCNAP-STFQRLMQR----MFGDQQYQSLLLYLDDIIVFSSSVSQHLQRLEVVLGRLQKEGLKAKLSKCVFFKQEVGYLGHVISNKGVSTDPAKIEAVAQWQ 521

HSP 2 Score: 36.5798 bits (83), Expect = 5.303e-28
Identity = 18/55 (32.73%), Postives = 29/55 (52.73%), Query Frame = -1 
Query: 1333 IKEFLGLTNYYRKFIKDYARLARSLE----SLCGSNKDK-------LNWSETCEH 1464
            ++ FLG  +YYR+F++ +A+LA  L     +L GS   K       + W+  CE 
Sbjct:  529 LRSFLGFASYYRRFVEGFAQLAGPLHKLVAALVGSKTKKGSGQALGMAWTAQCEQ 583

HSP 3 Score: 25.0238 bits (53), Expect = 5.303e-28
Identity = 16/42 (38.10%), Postives = 21/42 (50.00%), Query Frame = -2 
Query: 2052 FMKHKWDVGKTTLLTHEI-LTSGKPI-----VINPSDSPLIR 2159
            F  H  D+G T L+ HEI L    P+      I PSD  L++
Sbjct:  275 FSAHDGDLGCTNLIEHEIPLLDNIPVRQRHRRIPPSDYELVK 316

HSP 4 Score: 62.3882 bits (150), Expect = 2.390e-9
Identity = 34/126 (26.98%), Postives = 55/126 (43.65%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            C  CQ  K         +    A R  EI+ +DF   L+ S  G + +  M D FS+Y        Q   T    ++ +W  KFG P  +H D G++FE    ++    + ++   ++PYH + N 
Sbjct:  892 CERCQVAKDAGPVPHSFMGHLLASRPNEIVAIDFTV-LEPSRNGLENVLVMTDVFSKYTIAVPTRDQRASTVAQVLLREWFYKFGVPGRIHSDQGRSFESALIQQFCHLYGVERSRTTPYHPAGNG 1016
[Close]
BLAST of SMED30006886 vs. Ensembl Cavefish
Match: ENSAMXT00000054058.1 (pep primary_assembly:Astyanax_mexicanus-2.0:19:20158532:20160786:-1 gene:ENSAMXG00000037637.1 transcript:ENSAMXT00000054058.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 108.227 bits (269), Expect = 2.642e-27
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = -3 
Query: 1487 KIDEQINEMERFGIIKECNSPWNRP*VCV-KNKNDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK-YKRTIQKYRKCTR-----------------EDEVKFLGHTINKSGVTTDENKIQAIKQF 2050
            ++ + I+++ R G+I+E  S +  P V V K+   +R+C+D+R LN  T+R  FP+P I+E    L GAK+FS+IDL + Y+ V + E    K  F            P+ + N   T         QRL +      + +L  +  +VYLDDIL+FS+ +   +++     R                 +++VKFLGH ++  G+ TD +K++A+KQ+
Sbjct:  294 EVKDHISQLLRKGVIQESTSSYASPVVVVRKSDGSIRLCVDYRKLNLKTKRDAFPLPRIDESFDALRGAKFFSSIDLASGYHQVAVHERDRHKTAFTTPYGLYEHLRIPMGVVNGPAT--------FQRLMQA----TMTDLIFQIILVYLDDILVFSRTFSEHVERLETVLRRLQETGLKIKIEKCHFLQEKVKFLGHQVSAEGIATDPDKVEAVKQW 500

HSP 2 Score: 35.039 bits (79), Expect = 2.642e-27
Identity = 16/56 (28.57%), Postives = 30/56 (53.57%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGS-----NKDKLN------WSETCE 1470
            KA++ FLG  +YYR+F++ ++++A  L  L  +        ++N      WS  C+
Sbjct:  507 KALRSFLGFCSYYRRFVQGFSKIAGPLHDLVNNCLMVGPPSRVNERLLSLWSTECQ 562
[Close]
BLAST of SMED30006886 vs. Ensembl Medaka
Match: ENSORLT00000032005.1 (pep primary_assembly:ASM223467v1:7:31190450:31194463:1 gene:ENSORLG00000029990.1 transcript:ENSORLT00000032005.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 116.316 bits (290), Expect = 1.220e-32
Identity = 70/214 (32.71%), Postives = 117/214 (54.67%), Query Frame = -3 
Query: 1472 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS---------------KYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFKDVSV 2047
            + + IN++   G+I+E NSP+  P V  + K+  LR+C+D+R LN+ T R  FP+P I+E L  L+GA++F+T+DL + Y  V + E    K  F  P  L   + +   +C+      QRL +     + G+  C+  ++YLDDI++FS               + ++   K  KC   + EV++LGH I+  GV+TD +KI+A+  ++  S 
Sbjct:  329 VKDHINQLLASGVIRESNSPYASPIVLARKKDGSLRMCVDYRQLNSKTRRDAFPLPPIDESLDALSGARWFTTLDLASGYNQVPVTEGDRAKTAFCTPFGLFEWNRMPFGLCNAP-GTFQRLMQR----IFGDQQCQSVLLYLDDIVVFSSTIDEHLERLVLGRLQQEKLRVKLPKCAFFQQEVRYLGHVISDQGVSTDPHKIEAVAGWQPPST 537

HSP 2 Score: 36.965 bits (84), Expect = 1.220e-32
Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = -1 
Query: 1375 IKEFLGLTNYYRKFIKDYARLARSLESLCG 1464
            ++ FLG  +YYR+F++ +ARLA  L  L G
Sbjct:  541 LRTFLGFASYYRRFVEGFARLAAPLHRLVG 570

HSP 3 Score: 27.7202 bits (60), Expect = 1.220e-32
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 
Query: 2106 FMKHKWDVGKTTLLTHEI 2159
            F  H+ D+G TTL+THEI
Sbjct:  289 FAAHEGDLGCTTLMTHEI 306

HSP 4 Score: 65.855 bits (159), Expect = 2.230e-10
Identity = 35/126 (27.78%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            C  CQ  K  +      +    A R  E++ MDF   L+ S  G + +  + D FS+Y        Q   T    ++ +W  KFG P  +H D G++FE    ++L   + I+   ++PYH + N 
Sbjct:  909 CERCQLAKDNSRSHSAPLGHLIASRPNELVAMDFTI-LEPSRTGVENVLVLTDVFSKYTVAIPTRDQRAATVAKVLVAEWFSKFGVPARLHSDQGRSFESQLIQQLRGLYGIEKSRTTPYHPAGNG 1033
[Close]
BLAST of SMED30006886 vs. Ensembl Medaka
Match: ENSORLT00000041674.1 (pep primary_assembly:ASM223467v1:5:30088905:30092924:1 gene:ENSORLG00000022054.1 transcript:ENSORLT00000041674.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 115.931 bits (289), Expect = 1.911e-32
Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = -3 
Query: 1472 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS-----------------KYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFKDVSV 2047
            + + IN++   G+I+E NSP+  P V  + K+  LR+C+D+R LN+ T R  FP+P I+E L  L+GA++F+T+DL + Y  V + E    K  F  P  L   + +   +C+      QRL +     + G+  C+  ++YLDDI++FS                 + ++   K  KC   + EV++LGH I+  GV+TD +KI+A+  ++  S 
Sbjct:  329 VKDHINQLLASGVIRESNSPYASPIVLARKKDGSLRMCVDYRQLNSKTRRDAFPLPRIDESLDALSGARWFTTLDLASGYNQVPVTEGDRAKTAFCIPFGLFEWNRMPFGLCNAP-GTFQRLMQR----IFGDQQCQSVLLYLDDIVVFSSTIDEHLERLELVLGRLQQEKLRVKLPKCAFFQQEVRYLGHVISDQGVSTDPHKIEAVAGWQPPST 539

HSP 2 Score: 36.965 bits (84), Expect = 1.911e-32
Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = -1 
Query: 1375 IKEFLGLTNYYRKFIKDYARLARSLESLCG 1464
            ++ FLG  +YYR+F++ +ARLA  L  L G
Sbjct:  543 LRTFLGFASYYRRFVEGFARLAAPLHRLVG 572

HSP 3 Score: 27.7202 bits (60), Expect = 1.911e-32
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 
Query: 2106 FMKHKWDVGKTTLLTHEI 2159
            F  H+ D+G TTL+THEI
Sbjct:  289 FAAHEGDLGCTTLMTHEI 306

HSP 4 Score: 65.4698 bits (158), Expect = 2.734e-10
Identity = 35/126 (27.78%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            C  CQ  K  +      +    A R  E++ MDF   L+ S  G + +  + D FS+Y        Q   T    ++ +W  KFG P  +H D G++FE    ++L   + I+   ++PYH + N 
Sbjct:  911 CERCQLAKDNSRSHSAPLGHLIASRPNELVAMDFTI-LEPSRTGVENVLVLTDVFSKYTVAIPTRDQRAATVAKVLVAEWFSKFGVPARLHSDQGRSFESQLIQQLCGLYGIEKSRTTPYHPAGNG 1035
[Close]
BLAST of SMED30006886 vs. Ensembl Medaka
Match: ENSORLT00000032171.1 (pep primary_assembly:ASM223467v1:18:2114932:2117958:1 gene:ENSORLG00000025397.1 transcript:ENSORLT00000032171.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 115.546 bits (288), Expect = 3.608e-32
Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = -3 
Query: 1472 IDEQINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS-----------------KYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFKDVSV 2047
            + + IN++   G+I+E NSP+  P V  + K+  LR+C+D+R LN+ T R  FP+P I+E L  L+GA++F+T+DL + Y  V + E    K  F  P  L   + +   +C+      QRL +     + G+  C+  ++YLDDI++FS                 + ++   K  KC   + EV++LGH I+  GV+TD +KI+A+  ++  S 
Sbjct:  237 VKDHINQLLASGVIRESNSPYASPIVLARKKDGSLRMCVDYRQLNSKTRRDAFPLPRIDESLDALSGARWFTTLDLASGYNQVPVTEGDRAKTAFCTPFGLFEWNRMPFGLCNAP-GTFQRLMQR----IFGDQQCQSVLLYLDDIVVFSSTIDEHLERLELVLGRLQQEKLRVKLPKCAFFQQEVRYLGHVISDQGVSTDPHKIEAVAGWQPPST 447

HSP 2 Score: 35.8094 bits (81), Expect = 3.608e-32
Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = -1 
Query: 1375 IKEFLGLTNYYRKFIKDYARLARSLESLCG 1464
            ++ FLG  +YYR+F++ +ARLA  L  L G
Sbjct:  451 LRTFLGFASYYRRFVEGFARLAAPLHRLVG 480

HSP 3 Score: 28.4906 bits (62), Expect = 3.608e-32
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 
Query: 2106 FMKHKWDVGKTTLLTHEI 2159
            F  H+ D+G TTL+THEI
Sbjct:  197 FAAHEGDLGCTTLMTHEI 214

HSP 4 Score: 65.0846 bits (157), Expect = 3.054e-10
Identity = 35/126 (27.78%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  445 CLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            C  CQ  K  +      +    A R  E++ MDF   L+ S  G + +  + D FS+Y        Q   T    ++ +W  KFG P  +H D G++FE    ++L   + I+   ++PYH + N 
Sbjct:  819 CERCQLAKDNSRSHSAPLGHLIASRPNELVAMDFTI-LEPSRTGVENVLVLTDVFSKYTVAIPTRDQRAATVAKVLVAEWFSKFGVPARLHSDQGRSFESQLIQQLCGLYGIEKSRTTPYHPAGNG 943
[Close]
BLAST of SMED30006886 vs. Ensembl Medaka
Match: ENSORLT00000044989.1 (pep primary_assembly:ASM223467v1:1:17572028:17576089:-1 gene:ENSORLG00000028051.1 transcript:ENSORLT00000044989.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 112.079 bits (279), Expect = 7.941e-28
Identity = 73/212 (34.43%), Postives = 113/212 (53.30%), Query Frame = -3 
Query: 1487 KIDEQINEMERFGIIKECNSPWNRP*VCV-KNKNDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF--PLKL---SNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFS--------KYKRTIQKYR---------KCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2050
            ++ + I ++ R G+I+E  S +  P V V K  N LR+C+D+R LN  T R  FP+P I+E    L+GAK+FSTIDL + Y+ V + E+   K  F  P  L   + +   VC+      QRL +      + +L  +  +VYLDDIL++S        + +   Q+ R         KC   +  V+FLGH I+  G+ TD +K+ A+KQ+
Sbjct:  287 EVKDHIAQLLRKGVIQESTSAYASPIVLVRKADNSLRLCVDYRRLNAKTRRDAFPLPRIDECFDALHGAKFFSTIDLASGYHQVAVHENDRHKTAFITPFGLFEYTRLPFGVCNGP-ATFQRLMQA----TMSDLVFQIMLVYLDDILVYSPTFDGHLTRLQTVFQRLRETGLKVKVEKCNFLQSSVRFLGHQISADGIGTDPDKVAAVKQW 493

HSP 2 Score: 32.7278 bits (73), Expect = 7.941e-28
Identity = 13/43 (30.23%), Postives = 26/43 (60.47%), Query Frame = -1 
Query: 1342 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSET 1470
            K ++ FLG  +YYR+F++ +++LA  L     +  ++ N S +
Sbjct:  500 KELRSFLGFCSYYRRFLQGFSQLAGPLHDAVNTCLNQSNMSRS 542

HSP 3 Score: 62.3882 bits (150), Expect = 2.187e-9
Identity = 28/104 (26.92%), Postives = 55/104 (52.88%), Query Frame = 1 
Query:  511 AKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            A R  E++ +DF   L+ +  G++ +  + D F+++        Q   TT   ++ +W +K+G P+ +H D G+ FE    +EL K + +K   ++P+H   N+
Sbjct:  917 ATRPLEVVAVDFTL-LEPASDGRENVLVVTDVFTKFTQAFPTRDQKADTTAKVLLREWFMKYGVPERLHSDQGRNFESEVIQELCKLYGVKKTRTTPHHPQGNA 1019
[Close]
BLAST of SMED30006886 vs. Ensembl Medaka
Match: ENSORLT00000036641.1 (pep primary_assembly:ASM223467v1:3:12394909:12399588:1 gene:ENSORLG00000024795.1 transcript:ENSORLT00000036641.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 101.293 bits (251), Expect = 3.593e-27
Identity = 67/215 (31.16%), Postives = 111/215 (51.63%), Query Frame = -3 
Query: 1487 QINEMERFGIIKECNSPWNRP*VCVKNKN-DLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKY-----KRTIQ------------KYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQF 2038
             + ++   G+I+E  SP++ P V V+ KN D+R+C+D+R LN  T +  + +PN+ E    L+G+ +FS +DL + +Y +E+EE    K  F            P  ++N   T         QRL +      +GELN K A+V+LDD+++FS       +R +Q              +KC   +  VK+LGH I++ G+ TD  KI ++K +
Sbjct:  389 HLQQLLHAGVIRESESPFSSPIVVVRKKNGDVRLCIDYRKLNLQTVKDSYALPNLEESFSALSGSHWFSVLDLKSGFYQIEMEEADKQKTAFVCPLGFFEFNRMPQGITNAPST--------FQRLMER----CVGELNLKQALVFLDDLIVFSSTLEEHEERLLQVLGRLKEYGLKLSPQKCRFFQSSVKYLGHIISEKGIETDPEKISSLKTW 591

HSP 2 Score: 40.0466 bits (92), Expect = 3.593e-27
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = -1 
Query: 1381 KAIKEFLGLTNYYRKFIKDYARLARSLESL 1470
            K ++ FLG   YYR+FIKDY+++ R L  L
Sbjct:  598 KELRTFLGFCGYYRRFIKDYSKIMRPLNQL 627

HSP 3 Score: 21.557 bits (44), Expect = 3.593e-27
Identity = 13/46 (28.26%), Postives = 21/46 (45.65%), Query Frame = -2 
Query: 2046 FMKHKWDVGKTTLLTHEILTS--------GKPIVINPSDSPLIRKN 2159
            F +H+ D G+T  + H I  S         +P  I+P D   +R +
Sbjct:  346 FAQHELDFGRTGKIKHHITLSDPTPFKHRARP--IHPQDLEAVRNH 389
[Close]
BLAST of SMED30006886 vs. Planmine SMEST
Match: SMESG000029259.1 (SMESG000029259.1)

HSP 1 Score: 181.03 bits (458), Expect = 2.052e-81
Identity = 105/236 (44.49%), Postives = 149/236 (63.14%), Query Frame = 1 
Query:  151 RMKTRALAILTETNY--WQETD---EEIKRQIEIKQTQEFKIAKGVVVTVEDNIWIPEPERANFVLKIYKMCCRAGSKKVADYIETGYDXXXXXXXXXXXXDNCLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANSLIDSSER 843
            ++KTR L +  E  Y  WQ  +   +EIK ++E K  + F +    V+T +  IWIP   R   + +++ + C AG++KV  YI+   DM+ +   +K VI+NC  CQK K +TTKTKE      +   FE IYMD CGPLK +F  KKYI  +ID +S+YI+LTA++KQ  +T  +T++ KWILKFGAPK +HVDCGK FE  + KEL K   I++ +SSPYHH+ N +I+   R
Sbjct: 3165 KIKTRILTVTAEGGYNKWQNDNMEVQEIKNKLENKDCK-FIMENNTVLTKQGKIWIPSDNRQRMIKEVHVLLCHAGAQKVTKYIQNNCDMENLATEVKKVIENCERCQKMKTITTKTKEETQTIKSTEPFEKIYMDICGPLKETFNKKKYICGIIDHYSKYISLTAINKQDERTISETLLNKWILKFGAPKELHVDCGKNFEARSIKELAKTAGIELIFSSPYHHNTNGIIERQFR 3399

HSP 2 Score: 74.7146 bits (182), Expect = 2.052e-81
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 3 
Query:  828 RQFRTIRDYLNASLKDKKHND*PDILPEIEFTLNATIQKSTDKTPAEIIFGHKI 989
            RQFRTIR+Y+NASL +    +  DI+PEI++TLNAT+QK+T  +PAEIIFG KI
Sbjct: 3396 RQFRTIREYINASLNEGGRKNWADIVPEIKYTLNATVQKTTGVSPAEIIFGRKI 3449

HSP 3 Score: 57.7658 bits (138), Expect = 2.052e-81
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 2 
Query: 1097 REFRINNQVLIKIEGRTKDEDRYMGPFKVIQRFHDRK*ELQNQEGKRLIRNIEWLTSFKEG 1279
            R F + + VLIK E R KD+ R+ GP+KVI++ H+R   L++Q GK ++RN+E +  FK+G
Sbjct: 3483 RNFEMEDVVLIKQEIRNKDDARWEGPYKVIKKIHERSYLLKDQNGKMVVRNVEKIKHFKKG 3543

HSP 4 Score: 52.7582 bits (125), Expect = 2.052e-81
Identity = 26/56 (46.43%), Postives = 30/56 (53.57%), Query Frame = 2 
Query:    2 AKNPITPQFQTWIKVVWIWE-------RNEHTNADAMSSNICETYTQCKMQHEDAK 148
             K PIT QFQTWI  +   +          HTNAD +S   C T  QC M+HEDAK
Sbjct: 3107 TKKPITAQFQTWINYLSSLDIKMEYRKGTSHTNADMLSRKTCGTCVQCMMEHEDAK 3162

HSP 5 Score: 150.214 bits (378), Expect = 8.008e-67
Identity = 92/214 (42.99%), Postives = 125/214 (58.41%), Query Frame = -3 
Query: 1484 KIDEQINEMERFGIIKECNSPWNRP*VCV--KNKNDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHFPLK-----LSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSK--------YKRTIQKY---------RKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFK 2050
            KI+E I  +E  GII++CNSPWN P VCV  K K D+R+CLDFR LN ITER  FP+PN++E+L  L+G++YFS+IDLGNAYY V+L++    K  F  K      + +   +        + ++K     VL +L     +VYLDDILIF+K        + + + K           KC     EVKFLGH INK G+ TD  KI+AI+ F+
Sbjct: 2742 KIEEAIKNLENNGIIRKCNSPWNTPLVCVWKKEKKDIRLCLDFRQLNKITERQAFPMPNVDEILDILHGSRYFSSIDLGNAYYQVKLDKESQEKTAFSTKEGQFCFNRMPFGIAAAPGTFQELMTK-----VLKDLWKDGVMVYLDDILIFTKTEEDHYNIFGKVLGKIATAGLRLNPEKCQIFRKEVKFLGHIINKDGIQTDNTKIEAIQSFQ 2950

HSP 6 Score: 77.0258 bits (188), Expect = 8.008e-67
Identity = 54/174 (31.03%), Postives = 95/174 (54.60%), Query Frame = -2 
Query: 2058 GAKISVIDKSLLQKFGIRNLEKFYVK--LRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNIMLKIGSTTSNNKSEI---------NKLTDMAIVK---NVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILTSGKPIVINPSDSPL 2537
            GA+I+V+ KS++ +  + N+E    +  LRCAN S +E +GK+N+ V+ +G  +R V  FI+ K + P++IGG++  + F I LK        +S+            +TD   ++   +V     +  + ++      +FM  KWD+G T L+ H+I+T G+PI+I P   P+
Sbjct: 2568 GARINVMAKSVIDR--LENIEILETRESLRCANNSRLETMGKLNINVK-MGSMERNVT-FIIVKNLIPEIIGGVELQRLFGIELKCILEEHEKRSDFICEIEARFGRIITDEERLRHAIDVLKVTGNKRLLEIFQANKNVFMADKWDIGCTNLIKHKIITKGEPIMIKPRRQPI 2737

HSP 7 Score: 68.9366 bits (167), Expect = 8.008e-67
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            K ++ FLG+ NYYR+FIKDYA+ AR+LES+CG N +K+ W+E CE
Sbjct: 2956 KNLRSFLGICNYYRRFIKDYAKKARALESICGKNNEKIRWTEMCE 3000

HSP 8 Score: 21.1718 bits (43), Expect = 8.008e-67
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = -2 
Query: 1452 RRKCIKQLRSF 1484
            + KC+K LRSF
Sbjct: 2951 KPKCVKNLRSF 2961
[Close]
BLAST of SMED30006886 vs. Planmine SMEST
Match: SMESG000039117.1 (SMESG000039117.1)

HSP 1 Score: 155.606 bits (392), Expect = 6.040e-43
Identity = 88/159 (55.35%), Postives = 119/159 (74.84%), Query Frame = -2 
Query: 2061 GAKISVIDKSLLQKFGIRNLEKFYVKLRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNIMLKIGSTTSNNKSEINKLTDMAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILTSGKPIVINPSDSP 2537
            GAKISVID+S+L   G  N+EK  VKLRCANESP+ I+GK+NV VQI+G S+ +++EFIV KEIS K+IGGIDFL+ F+IML + S+ S N   I ++  +    +  +Q +D+N+++L  KYD IF+KHKWDV KT L+THEILT+G+P+ INP   P
Sbjct:   26 GAKISVIDESVLDNIGKFNIEKCLVKLRCANESPVSIVGKVNVAVQIVGTSETRMIEFIVDKEISLKLIGGIDFLRKFDIMLNMKSSLSTNDENIARIMHLK-ESSESNQCQDSNVRELCRKYDSIFIKHKWDVCKTNLITHEILTAGRPMAINPRLQP 183
[Close]
BLAST of SMED30006886 vs. Planmine SMEST
Match: SMESG000031172.1 (SMESG000031172.1)

HSP 1 Score: 107.457 bits (267), Expect = 2.149e-39
Identity = 75/189 (39.68%), Postives = 100/189 (52.91%), Query Frame = -3 
Query: 1484 IDEQINEMERFGIIKECNSPWNRP*VCVKNKNDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHFPLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKYKRTIQKYRKCT-REDEVKFLGHTINKSGVTTDENKIQAIKQFK 2047
            IDE I EME+ GI ++C SPWN                   +  NI+E  IFPIP+ NE++  LNG+KYF+T+D     Y VEL++    K+ F +K           E        KN    VLG LN K  +VYLDDIL FS+         KC     + KFLGH INK G+ T++NKI+AIK+++
Sbjct:  209 IDENIIEMEKNGITEKCESPWNSL---------------LSSQFNISEL-IFPIPSTNEIMDILNGSKYFTTLD-----YQVELKKESKFKIAFAIKNEQYCFKRMPFEIAAAPTTFKNLMNKVLGTLNWKETVVYLDDILSFSRKAGLKLSKDKCHFLRKQTKFLGHIINKDGIRTEDNKIEAIKEYE 376

HSP 2 Score: 50.447 bits (119), Expect = 2.149e-39
Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = -1 
Query: 1336 KAIKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETCE 1470
            K ++ FL +TNYYR+F K+Y    + LE LCGSN +KL  ++ CE
Sbjct:  382 KKLRIFLSMTNYYRRFNKNYTEYTKPLEILCGSNSNKLIVTDICE 426

HSP 3 Score: 46.2098 bits (108), Expect = 2.149e-39
Identity = 17/28 (60.71%), Postives = 24/28 (85.71%), Query Frame = -2 
Query: 2076 FMKHKWDVGKTTLLTHEILTSGKPIVIN 2159
            FMKHKWD+GKT+++ +EI+T+  PI IN
Sbjct:  170 FMKHKWDIGKTSMIKYEIITTRPPIAIN 197

HSP 4 Score: 54.6842 bits (130), Expect = 2.777e-7
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = -2 
Query: 1683 RRTSKLKTAFSIKTKQYIFNRMPFGIAAAPATFQKLMN 1796
            ++ SK K AF+IK +QY F RMPF IAAAP TF+ LMN
Sbjct:  272 KKESKFKIAFAIKNEQYCFKRMPFEIAAAPTTFKNLMN 309
[Close]
BLAST of SMED30006886 vs. Planmine SMEST
Match: SMESG000081257.1 (SMESG000081257.1)

HSP 1 Score: 108.612 bits (270), Expect = 3.643e-37
Identity = 76/218 (34.86%), Postives = 108/218 (49.54%), Query Frame = -3 
Query: 1493 GKIDEQINEMERFGIIKECNSPWNRP*VCV-KNKNDLRICLDFRALNNITERPIFPIPNINELLYTLNGAKYFSTIDLGNAYY*VELEEHQN*KLHF------------PLKLSNISLTVCHLE*QQLQRLSKN**IFVLGELNCKFAIVYLDDILIFSKYKRTIQKY-----------------RKCTREDEV-KFLGHTINKSGVTTDENKIQAIK 2053
             K++E +  +   G++++C SPWN P V V K    +RICLDFR LN++TE+  FP+P++  LL  L  +K F +IDLG AYY VEL E+   K  F            P  LS    T   L  Q L+ L     +F       K  +VYLDDILI+ + + T  K                   KC     V  F+GHT+++ G+ T++ KI  I+
Sbjct:  466 AKVEELVQNLLEAGVVRKCQSPWNTPLVIVGKPDGSVRICLDFRLLNSVTEKFSFPMPDMQLLLDCLGKSKIFYSIDLGQAYYLVELNENSQIKTAFSTKEGQFCFNRLPFGLSTAPATFQKLMHQILEGL-----VF-------KGVVVYLDDILIYGENQETHDKLLFEVFTRIRDSGLKVNPEKCAFNKSVLNFIGHTVSEKGIQTNKRKISEIE 671

HSP 2 Score: 47.7506 bits (112), Expect = 3.643e-37
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = -2 
Query: 2058 VQIIGISKRKVVEF--IVAKEISPKVIGGIDFLKTFNIMLKIGSTTSNNKSEINK-LTD---MAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKTTLLTHEILTSGKPIVINPSDSPL 2405
            V+I+    +K  E   I+ ++I P  IGG+D +K F + LK     +   S +NK  TD   +          K++ +  L+ ++  IFM  ++D+G T ++THE+ TSG PI+ NP   P+
Sbjct:  343 VKIVAKWNKKFRELNVIIVRKIHPNFIGGVDTMKIFGMELK--EVNNIESSLVNKRFTDSDRLKNTLLTLKLDKNSELGTLISQFSNIFMASRFDLGHTKVITHELKTSGPPILQNPRGQPM 462

HSP 3 Score: 40.0466 bits (92), Expect = 3.643e-37
Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = -1 
Query: 1339 IKEFLGLTNYYRKFIKDYARLARSLESLCGSNKDKLNWSETC 1464
            ++ FLGLT YYR+FIK+Y+ +A  L +        + W+E C
Sbjct:  682 LRSFLGLTTYYRRFIKNYSMIAAPLYAATTGCDKMIVWTEEC 723

HSP 4 Score: 73.1738 bits (178), Expect = 8.706e-13
Identity = 50/176 (28.41%), Postives = 88/176 (50.00%), Query Frame = 1 
Query:  295 IWIPEPERANFVLKIYKMCCRAGSKKVADYIETGYDXXXXXXXXXXXXDNCLNCQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMIDQFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTFKELMKKHDIKVQYSSPYHHSANS 822
            + +P+    + V   +   C  G  K   Y++  + +  MN++I   I+ C  C   K    +TKE ++ ++ +R  E I +D       +   KKY+  +ID FS+ ++L     Q   T ++ I+  WI +FG P+ +  D  + FE   F++ M+K  IK ++SSPY H +N 
Sbjct:  945 VVVPDSYVKSLVNYFHIELCHLGINKTLFYLKDFFFLPSMNQIITECINKCKICASRKIDQGRTKEILLPRTGERFLEQIVVDI--DYMETKESKKYMIVIIDCFSKLVSLP----QDEATILNVILNNWIYRFGRPESILTDRERIFEGSMFRDWMEKFGIKQEFSSPYQHQSNG 1114
[Close]
BLAST of SMED30006886 vs. Planmine SMEST
Match: SMESG000053907.1 (SMESG000053907.1)

HSP 1 Score: 122.479 bits (306), Expect = 6.061e-31
Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = -2 
Query: 2127 GAKISVIDKSLLQKFGIRNLEKFYVKLRCANESPIEILGKINVQVQIIGISKRKVVEFIVAKEISPKVIGGIDFLKTFNIMLKIGSTTS------------NNKSEINKLTDMAIVKNVXXXXXXXXXXXXXXXXXXIFMKHKWDVGKT 2537
            GA I +ID+S+L   G  N+EK  VKLRCA ESP+ I+GK+NV VQI+G  + +++EFIVAKEISPK+IGGIDFL+ FNIML   S+ S             + SE N+  DM + +             L  KY+  F+KHKWDVGKT
Sbjct:   99 GANICMIDESILDNIGKFNIEKCLVKLRCAIESPVLIVGKVNVAVQIVGTRQTRMIEFIVAKEISPKLIGGIDFLRKFNIMLHTKSSLSKKDENIAGIMHLKSPSESNQCKDMNVRE-------------LCSKYESNFLKHKWDVGKT 234
The following BLAST results are available for this feature:
BLAST of SMED30006886 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of SMED30006886 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of SMED30006886 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006886 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CR925755.22.597e-2232.51pep chromosome:GRCz11:17:42486740:42492668:-1 gene... [more]
BX546500.14.396e-2232.02pep chromosome:GRCz11:23:12926092:12931693:-1 gene... [more]
BX511082.11.648e-2132.02pep chromosome:GRCz11:9:14291932:14297132:1 gene:E... [more]
BX511224.11.662e-2132.02pep chromosome:GRCz11:2:18017000:18022765:1 gene:E... [more]
CR855320.12.880e-2131.53pep chromosome:GRCz11:1:7956030:7961696:1 gene:ENS... [more]
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BLAST of SMED30006886 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
anxa65.145e-2531.75annexin A6 [Source:Xenbase;Acc:XB-GENE-989741][more]
ENSXETT00000006041.13.542e-2127.75pep primary_assembly:Xenopus_tropicalis_v9.1:6:373... [more]
ENSXETT00000034712.14.328e-1930.52pep primary_assembly:Xenopus_tropicalis_v9.1:9:335... [more]
ENSXETT00000042189.14.475e-1930.52pep primary_assembly:Xenopus_tropicalis_v9.1:KV460... [more]
castor13.147e-1830.52cytosolic arginine sensor for mTORC1 subunit 1 [So... [more]
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BLAST of SMED30006886 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006886 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8I7P9|POL5_DROME1.753e-2228.00Retrovirus-related Pol polyprotein from transposon... [more]
sp|P20825|POL2_DROME1.981e-2231.25Retrovirus-related Pol polyprotein from transposon... [more]
sp|P04323|POL3_DROME9.978e-2130.80Retrovirus-related Pol polyprotein from transposon... [more]
sp|P10401|POLY_DROME4.614e-1928.76Retrovirus-related Pol polyprotein from transposon... [more]
sp|Q99315|YG31B_YEAST1.674e-1428.78Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomy... [more]
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BLAST of SMED30006886 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5S6Q3S47.793e-3032.24Uncharacterized protein OS=Trichuris muris OX=7041... [more]
A0A5S6QK481.055e-2932.24Uncharacterized protein OS=Trichuris muris OX=7041... [more]
A0A164P0I21.913e-2933.94Uncharacterized protein (Fragment) OS=Daphnia magn... [more]
A0A3B3H3G31.914e-2932.71Uncharacterized protein OS=Oryzias latipes OX=8090... [more]
A0A5S6PYL22.260e-2932.24Uncharacterized protein OS=Trichuris muris OX=7041... [more]
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BLAST of SMED30006886 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000035136.11.257e-3033.03pep primary_assembly:Astyanax_mexicanus-2.0:19:221... [more]
ENSAMXT00000034038.14.916e-2934.91pep primary_assembly:Astyanax_mexicanus-2.0:14:312... [more]
ENSAMXT00000038088.11.860e-2833.17pep primary_assembly:Astyanax_mexicanus-2.0:23:138... [more]
ENSAMXT00000054230.15.303e-2832.08pep primary_assembly:Astyanax_mexicanus-2.0:14:194... [more]
ENSAMXT00000054058.12.642e-2730.59pep primary_assembly:Astyanax_mexicanus-2.0:19:201... [more]
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BLAST of SMED30006886 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006886 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006886 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006886 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000032005.11.220e-3232.71pep primary_assembly:ASM223467v1:7:31190450:311944... [more]
ENSORLT00000041674.11.911e-3232.41pep primary_assembly:ASM223467v1:5:30088905:300929... [more]
ENSORLT00000032171.13.608e-3232.41pep primary_assembly:ASM223467v1:18:2114932:211795... [more]
ENSORLT00000044989.17.941e-2834.43pep primary_assembly:ASM223467v1:1:17572028:175760... [more]
ENSORLT00000036641.13.593e-2731.16pep primary_assembly:ASM223467v1:3:12394909:123995... [more]
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BLAST of SMED30006886 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000029259.12.052e-8144.49SMESG000029259.1[more]
SMESG000039117.16.040e-4355.35SMESG000039117.1[more]
SMESG000031172.12.149e-3939.68SMESG000031172.1[more]
SMESG000081257.13.643e-3734.86SMESG000081257.1[more]
SMESG000053907.16.061e-3148.32SMESG000053907.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30006886 ID=SMED30006886|Name=SMED30006886|organism=Schmidtea mediterranea sexual|type=transcript|length=2976bp
TGCAAAAAACCCAATCACACCCCAGTTCCAAACATGGATAAAAGTAGTTT
GGATATGGGAAAGGAACGAACATACAAATGCGGATGCTATGTCAAGCAAT
ATTTGTGAAACATATACACAATGCAAAATGCAACATGAAGACGCAAAGAA
AGAATGAAAACAAGGGCTTTAGCAATATTAACAGAAACTAATTATTGGCA
AGAGACAGATGAAGAAATTAAGAGACAAATTGAAATAAAACAAACACAAG
AATTCAAAATAGCAAAAGGTGTTGTAGTTACTGTGGAAGACAATATATGG
ATTCCAGAACCAGAAAGAGCAAATTTTGTTTTAAAGATTTATAAGATGTG
TTGTCGTGCAGGTAGTAAAAAAGTAGCTGATTATATTGAAACTGGATATG
ACATGAAAAAGATGAATAAAGTCATAAAAATGGTAATAGATAACTGTTTA
AACTGCCAAAAACCGAAGGCAATGACAACTAAGACAAAAGAGACAATAAT
AAAACAATCGGCAAAGAGACAATTTGAAATAATTTATATGGACTTTTGTG
GTCCACTCAAAACAAGTTTTCGTGGTAAGAAATATATTTTCGCTATGATC
GATCAATTTAGTCGATACATAACATTGACAGCAGTTTCAAAGCAAGGCAA
TAAAACAACGGTTGATACAATTATTGGAAAATGGATCCTGAAATTTGGCG
CTCCAAAGATTGTTCATGTTGATTGTGGAAAAACATTTGAATTTCATACA
TTTAAAGAATTAATGAAAAAGCACGATATAAAAGTACAGTATTCAAGCCC
TTACCATCACAGTGCAAATAGTCTAATAGACAGTTCAGAACGATTAGAGA
TTATTTGAATGCTTCATTGAAAGATAAGAAACATAATGATTGACCAGATA
TATTACCGGAAATAGAATTCACGTTAAATGCTACCATACAAAAATCGACA
GACAAAACCCCAGCGGAAATTATTTTTGGTCATAAAATTTGACATCGATG
GGAACACACCGTTACCAATGTGACAGACAGAAATAAAATAATAACTAATG
TCTTAGCTAACCATAAATGAAATACAAACAGGGAAATAGAATAAATAGAG
AATTTAGAATAAATAATCAAGTTTTGATCAAAATAGAAGGAAGAACAAAA
GATGAAGATAGATATATGGGTCCTTTCAAAGTAATTCAAAGATTTCACGA
CAGAAAATAGGAACTACAAAATCAGGAAGGAAAGCGTTTGATAAGAAATA
TTGAATGGTTAACATCTTTTAAAGAAGGGGAATGTAAGGATTATTAATAT
TAAATCAATTATATATATTCTCAAGTTCATATATGTTCACAAGTTTCAGA
CCAATTTAATTTATCTTTATTACTACCACATAACGACTCTAAACTTCTTG
CTAATCTGGCATAATCTTTTATGAATTTCCTATAATAATTAGTTAGTCCT
AAAAACTCCTTAATTGCTTTATACACTTACGTCTTTAAATTGTTTAATTG
CTTGTATTTTATTTTCATCTGTCGTTACACCACTTTTATTAATTGTGTGT
CCCAAGAACTTTACTTCATCTTCTCTAGTACACTTCCTATATTTTTGAAT
TGTTCTTTTATATTTCGAAAATATTAAAATATCATCCAAGTAAACAATTG
CAAACTTACAATTAAGTTCTCCTAGTACAAAAATTCATTAATTTTTGGAA
AGTCGCTGGAGCTGCTGCTATTCCAAATGGCATACGGTTAAAGATATATT
GCTTAGTTTTAATGGAAAATGCAGTTTTCAATTTTGATGTTCTTCTAGCT
CAACTTAGTAATATGCATTTCCCAGGTCAATCGTACTAAAATATTTTGCT
CCATTTAATGTATACAATAGTTCATTAATGTTCGGAATTGGAAATATTGG
TCTTTCTGTTATATTATTCAGCGCTCGAAAATCTAGACATATTCTTAAGT
CATTTTTATTTTTGACACATACTTACGGTCTGTTCCACGGGGAATTACAT
TCTTTTATTATGCCAAACCTTTCCATTTCATTAATCTGTTCATCAATTTT
TCCTAATGAGCGGGCTGTCGCTAGGGTTAATGACTATAGGTTTACCTGAA
GTCAAAATTTCATGGGTTAACAAAGTTGTTTTTCCTACGTCCCATTTGTG
TTTCATAAAAATTCAATCATATTTATCCAACAATTTTTTAATATTATTAT
CTTTCAGTTGATCATCTACATTTTTCACTATTGCCATATCTGTCAATTTA
TTTATTTCACTTTTATTATTACTAGTAGTGCTTCCAATTTTTAACATAAT
ATTAAACGTTTTCAAAAAATCTATTCCTCCAATAACTTTAGGAGATATCT
CTTTAGCTACAATAAATTCGACAACTTTCCTTTTCGATATTCCAATAATT
TGCACTTGCACATTAATTTTCCCCAATATTTCAATAGGTGATTCATTTGC
ACATCTTAATTTCACATAAAATTTCTCTAAATTTCTAATTCCAAACTTTT
GTAGCAAACTTTTATCAATCACACTTATTTTTGCGCCCTAACCTACCCTA
ACCCATTTAATTTATAGTATTAATTATTTAAATTATTATTATCATTAATT
ATACAAAAATATTCATCGAAATTTAAATTTTCCTCATTATTACATCCTAA
ATCATCCATTCTCCATTTATCAACACACCAATCACTATACGCGTTCGAAT
CTAACCAACAATCACAATTATTATCTAAACGTTTAATTTTTTTTATCATT
CTCAGCATACAAACAATCATCAATCATCACATTCATGCATTCCTTATGCA
ATGCATTACTTACATTAACTGTAGAGCTCCGATCACCTCCTCTTGTGGTC
GAGCATATCCGTTTGGGGATTGACTTTCATTTTCATCATCTGGTAGTTTG
ATTACTGCCACTGTTTCGCGATATTGTCGTTCTTTGTTTGAGCAAAGTTC
GAAGCACTGGTAAGGAAAGTTTCCTG
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protein sequence of SMED30006886-orf-1

>SMED30006886-orf-1 ID=SMED30006886-orf-1|Name=SMED30006886-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=235bp
MKTRALAILTETNYWQETDEEIKRQIEIKQTQEFKIAKGVVVTVEDNIWI
PEPERANFVLKIYKMCCRAGSKKVADYIETGYDMKKMNKVIKMVIDNCLN
CQKPKAMTTKTKETIIKQSAKRQFEIIYMDFCGPLKTSFRGKKYIFAMID
QFSRYITLTAVSKQGNKTTVDTIIGKWILKFGAPKIVHVDCGKTFEFHTF
KELMKKHDIKVQYSSPYHHSANSLIDSSERLEII*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000101muscle cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: biological process
TermDefinition
GO:0015074DNA integration
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 114..231
e-value: 5.1E-28
score: 99.6
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 122..227
e-value: 7.2E-17
score: 61.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 119..234
score: 17.154
NoneNo IPR availableGENE3DG3DSA:1.10.340.70coord: 9..108
e-value: 4.9E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 70..225
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 70..225
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 120..227