Chromodomain-helicase-DNA-binding protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30006818 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13Note: Hover over icons to view figure legend
Homology
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Match: CHD2 (chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1917]) HSP 1 Score: 953.74 bits (2464), Expect = 0.000e+0 Identity = 532/1078 (49.35%), Postives = 708/1078 (65.68%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXX-XXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVG----------QVNXXXXXXXXXDNKETGGK-----------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE+VL+ R+G G TG T+ Y + G+ D DE E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL +++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P +E E EN + L I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + + E E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q Q +S SE ++ + K TD EI+ IK KKF PLER++ I +AE++D + ++ + + I N C + E + + K+N + I + ++VK+I+Q ++ ++LH+ +P + EE+ K+ L K A++ W EDD+RLL+G++E G NWE IK D +LKLT KILP ++PQ L+TR +YLLK LR Sbjct: 262 TIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHSTWESEESLQQ-QKVKGLKKLENFKKKEDEIKQWLGK-VSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLG-GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEI---LLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLR 1322 HSP 2 Score: 58.9214 bits (141), Expect = 1.019e-7 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L+ + G ++ + +CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1469 FSICKERMRPVKKALKQLDKPDK--GLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1558
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Match: CHD2 (chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1917]) HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0 Identity = 532/1078 (49.35%), Postives = 708/1078 (65.68%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXX-XXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVG----------QVNXXXXXXXXXDNKETGGK-----------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE+VL+ R+G G TG T+ Y + G+ D DE E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL +++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P +E E EN + L I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + + E E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q Q +S SE ++ + K TD EI+ IK KKF PLER++ I +AE++D + ++ + + I N C + E + + K+N + I + ++VK+I+Q ++ ++LH+ +P + EE+ K+ L K A++ W EDD+RLL+G++E G NWE IK D +LKLT KILP ++PQ L+TR +YLLK LR Sbjct: 262 TIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHSTWESEESLQQ-QKVKGLKKLENFKKKEDEIKQWLGK-VSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLG-GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEI---LLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLR 1322 HSP 2 Score: 58.9214 bits (141), Expect = 9.948e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L+ + G ++ + +CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1469 FSICKERMRPVKKALKQLDKPDK--GLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1558
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Match: CHD1 (chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1915]) HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0 Identity = 511/1049 (48.71%), Postives = 689/1049 (65.68%), Query Frame = 2 Query: 671 LNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETG----GK------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY--SECDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 ++ RIG G TG T+ Y + + N + E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW + K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ ++LLS FKV N + DED + + + K W +I+P+D R +++EEE QK L E+ + PR R K S ++ GK +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC S TE + F I + ++ K ++ ++L LH+ +P + EER ++ +P TK A++ W EDD+ LL+G++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 278 MDCRIGRKGATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKK-FQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL 1313 HSP 2 Score: 66.2402 bits (160), Expect = 6.055e-10 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1408 ELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1505
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Match: CHD1 (chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1915]) HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0 Identity = 511/1049 (48.71%), Postives = 689/1049 (65.68%), Query Frame = 2 Query: 671 LNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETG----GK------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY--SECDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 ++ RIG G TG T+ Y + + N + E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW + K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ ++LLS FKV N + DED + + + K W +I+P+D R +++EEE QK L E+ + PR R K S ++ GK +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC S TE + F I + ++ K ++ ++L LH+ +P + EER ++ +P TK A++ W EDD+ LL+G++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 278 MDCRIGRKGATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKK-FQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL 1313 HSP 2 Score: 66.2402 bits (160), Expect = 6.055e-10 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1408 ELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1505
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Match: CHD2 (chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1917]) HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0 Identity = 455/838 (54.30%), Postives = 586/838 (69.93%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXX-XXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQV 3103 IE+VL+ R+G G TG T+ Y + G+ D DE E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL +++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P +E E EN + L I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + E + E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q Sbjct: 53 TIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHSTWESEESLQQ-QKVKGLKKLENFKKKEDEIKQWLGK-VSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLG-GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEI---LLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQT 873
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Match: chd-1 (Chromodomain and Helicase Domain protein [Source:UniProtKB/TrEMBL;Acc:O17909]) HSP 1 Score: 881.708 bits (2277), Expect = 0.000e+0 Identity = 492/1047 (46.99%), Postives = 664/1047 (63.42%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQ--RNKNSD---SLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYL--SHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETG--------GKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV------------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLA-NWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLK 3700 +E V+ +R G G TG T+ YN K + ND D+TE+Q+ +KW WSH+H+TWESE ++ N G+KK+ + + QK E+WK+ A E ++ + E++ E L ++ + ER++ Q R++ +D + +YLIKW L Y TWE ++ P I + R ++K PN+ L +RPKF PD+L S KLRDYQL+G+NW+ +AW +GNS ILADEMGLGKTIQ+I L+ LF+++ + GP+L+VVPLST+++WQ EF WAP MN+++Y GD VSR +IR+ EW+ K +K + +TTYE+LLKDK +L+ I WA L VDEAHRLKNDES LY L F N +LLITGTP+ NSL+ELWALLHFIMP+KF+ W +FE +N + +S L+K LEPFLLRR KKDVEKSLP K+EQI+RV M Q + YK ILTKNY LSK +G + F+N+VMELKKCCNH L D + D L+ +KSSGK++LLDKL+ LK+KGHRVLIFSQMV MLDI+ +YL LR + QRLDGS++ LRKQA+DH+NA GSTDF FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM+RAHRIGQ + V++YR V K S+EE+I+E AKRK+VLDHLVIQRMD+ L + A+ + PF K EL+ ILKFGA +LF + E ++E E++I IL AET ++E N+LLS+FK N E++DI + W+ I+P++ R +I EEE K L E+ L PRQRK+ + QV + +E+ +TG G T EIK IK +KF PL R++ I +AE+ +H+ E+ +++ + C E D+ EK A F +++K I +S +L LH+IL K++E + F P KL W W DD+ LL+GV++ G +WEAIKMD L L KI +++PQ +L+ RV+YLLK Sbjct: 196 TVERVIKWRHGVPGATGSATTCYNIADKGDP--NDQIPGDKTEQQFFVKWTGWSHLHNTWESENSL-ALMNAKGLKKVQNYVKKQKEVEMWKRS-ADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVA----PEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN-----ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYD---DAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELFKEKEGEEQEPEVDIDRILMGAETREAEEEVMK-ENELLSSFKYANFA-IDEEKDIAAATDE-----WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQ----PIPQVVEDDDGDDDEEEDDTGKKKKKKAVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEIL-KSEETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLK 1214
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Match: chd-3 (Chromodomain-helicase-DNA-binding protein 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q22516]) HSP 1 Score: 508.834 bits (1309), Expect = 9.233e-152 Identity = 296/717 (41.28%), Postives = 421/717 (58.72%), Query Frame = 2 Query: 782 ERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWK-----KHHASPEDLDAAQFEEERNESLLQQK-MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEF---EERSRSVKIPN-----------------RKCEALTRRPKFAPI------REQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF--------PKKKM------LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEET---ENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 ER++ +KW+ ++ W SET + Y F + ++ K + I++ +HH+ D D + E + ++ + M+ RII+ S DYL+KWK L Y ++TWE D + N + + II++ ER + ++P ++ E +RR K I QPD++S T L YQL+G+NWL H W+ G ILADEMGLGKT+Q++ FL L + GPFL+ PLSTI +W+ E +W P ++ Y GD SR VIRE E+ F PK LKFHV +T+YE + DK L+ I WA L VDEAHRLKN++S + L ++ R+L+TGTP+ N+L EL+ LL+F+ PD+FN F ++ E+ + +L+ +L P +LRR K DV +PSK E I+RV + Q + YK ILT+N++AL+ + G S +NI+MELKKCCNH L E +N M S L IK++GK +LL K++ +LK+ GHRVLIFSQM MLDI+ D+ + G+ ++R+DGSI G R+ AID +NA G+ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHR+GQK +V +YRFV K S+EE+I AK+KM+L HLV++ A + SK EL+++L++G +LF Sbjct: 424 EREFFVKWKYLAYWQCEWLSETLMDVY--FTALVRMYWRKVDSENPPIFEESTLSRHHS---DHDPYKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQ-DYLVKWKELSYEHATWERDDTDIAN-YEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETGG-NLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFS----EISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSAL---IKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVR-------AGLGAKDGKSMSKTELDDVLRWGTEELF 1118
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Match: let-418 (pep chromosome:WBcel235:V:5826833:5832866:1 gene:WBGene00002637.1 transcript:F26F12.7.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:let-418) HSP 1 Score: 495.738 bits (1275), Expect = 7.112e-147 Identity = 295/713 (41.37%), Postives = 418/713 (58.63%), Query Frame = 2 Query: 782 ERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKE------IQKRREIWKKHHASPEDLDAAQFEEERNESLLQQK-MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEF---EERSRSVKIPN--RKCEALTRRPKFAP---------------IRE----QPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF--------PK-KKM-----LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 ER++ +KW+ S+ +W SE ++ + M LL +++ + + +HH+ D D + E + ++ + M+ RII+ Q S DYL+KWK L Y +TWE D + N + II++ E + IP +K A R K P IR+ QPDY++ T KL YQL+G+NWL H W+ G ILADEMGLGKT+Q++ FL L + GPFL+ PLSTI +W+ E W P ++ Y G +R V+RE E+ F PK KM +KFHV +T+YE + DK L+ I W L VDEAHRLKN++S + L + + R+L+TGTP+ N+L EL+ LL+F+ ++FN F +N E+ + +L+ +L P +LRR K DV +PSKSE I+RV + Q + YK ILT+N++AL+ + G S +N++MELKKCCNH L + E + + IK+SGK +LL K++ +LK+ GHRVLIFSQM RMLDI+ D G+ ++R+DGSI G +R+ AID +NA G+ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHR+GQK +V +YRFV K S+EEKI AK+KM+L+HLV++ KT SK EL+++L++G +LF Sbjct: 412 EREFFVKWKYLSYWQCSWVSEMLLEVHFR---MLILLYWRKNDSDAPPEFEESVTSRHHS---DNDPYKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQ-DYLVKWKELSYDQATWERDDSNIAN-YEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGG-KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN----EISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKT-------MSKTELDDVLRWGTEELF 1104
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Match: chd-7 (Chromodomain and Helicase Domain protein [Source:UniProtKB/TrEMBL;Acc:O61845]) HSP 1 Score: 447.588 bits (1150), Expect = 5.996e-129 Identity = 297/820 (36.22%), Postives = 446/820 (54.39%), Query Frame = 2 Query: 575 GEKIDNECIEGSYDDQRMSEFI--------SEEVNVIEEVLNFRIGFVGNTGIETSYYNKVL--------------------KNEKYGNDDNNSDETER-----------QYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPK---------KKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQL-YNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKM---DPD------SHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGA-ADLFXXXXXXXXXXXXXIQDILQRAETT 2857 + D +EG+ D EF+ V+E++LN R+G V ET E GN +++ +TE Q+LIKW+ S++H W K + EI KR E K + + +E+ N + +R++D + LIKWK+L Y TWE ++I P +E R R V P + E +RP+ ++ + LR+YQ +GV+WL + + + ILADEMGLGKT+QTI FLS +++ + I GPFL+VVPLSTI +W EF W MN I+Y G A +R+V+++ E ++ K K +K ITT+E ++ D ++L KI W +DEAHRLKN +L N L+ F R+L+TGTP+ N++ EL++LL+F+ P +F+ F +++ + + ++ V +L ++L+P +LRR K+DVEKSL K E II V + Q + Y+ IL +N+ L K T S +N++MEL+KCCNH L+N +E N PD +H + I++SGK++L++KL+ +L++ GH+VLIFSQMV++LD++ ++L+ + F+R+DG+++G LR+ AID F+ E S F FLL TRAGGLGINL ADTVIIFDSDWNPQNDLQA AR HRIGQK+ V VYR + N+ E ++ + A K+ LD V+Q +AL + A SK ++ E+LK GA + +++ E + E +I+ ILQR T Sbjct: 949 ADPTDEAGVEGAKSDDEDDEFLMKIDTPAPDPNAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEEKVKKEPKENGENGESVGNGESSKSKTESETNEIEEEEVEQFLIKWKGRSYVHCEW---------------KTAAELLEIDKRVEAKIKRFKVKKMSSYIEDDEDFNSDFVI----VDRVVDLITEDDGQEF-VLIKWKSLGYEEVTWEPIEMI-----PADKVELW-RERQVIDPAKIRE--KQRPEPEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYD-YGIHGPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQFG----SCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCKGTSA--PSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAH-KALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQST-TALKAEGTA-----LSKKDVEELLKKGAYGSIMDEENESSKFNEEDIETILQRRTQT 1725
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Match: isw-1 (Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]) HSP 1 Score: 422.935 bits (1086), Expect = 5.208e-127 Identity = 226/502 (45.02%), Postives = 326/502 (64.94%), Query Frame = 2 Query: 1283 KLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSR-QVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 ++RDYQ+ G+NWLA + ILADEMGLGKT+QTI + Y+ + P L++VP ST+ +W EF W P +N ++ GD +R QV+R+ P+K F VC TTYE++LK K L K++W ++ +DEAHR+KN++S+L + ++ RLLITGTP+ N+L ELWALL+F++PD F + DF D + ++ ++V L+KVL+PFLLRR K DVEKSL K E + V + + Q E Y +L K+ + ++ + + +NI+M L+KC NH L + E D HL + +SGKM++LDKL+ + KE+G RVLIFSQ RMLD++ D+ R + + RLDGS R AI+ +NA S F F+L+TRAGGLGINLATAD VII+DSDWNPQ+DLQAM RAHRIGQK+QV V+R + +N+++E+IIE A+ K+ LD++VIQ+ R ++A K K ++ +++ GA +F Sbjct: 131 EMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDV--ILPQK----FDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDF-DSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFD--GAEPGPPFTTDQHL---VDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQ-----GRMSEAQKT--LGKGDMISMIRHGAEQVF 613
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Match: Chd1 (gene:FBgn0250786 transcript:FBtr0077674) HSP 1 Score: 907.516 bits (2344), Expect = 0.000e+0 Identity = 496/1076 (46.10%), Postives = 683/1076 (63.48%), Query Frame = 2 Query: 668 VLNFRIGFVGNTGIETSYY----NKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKN------QPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNI-------TETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKA-------------------------YQVGQVNXXXXXXXXXDNKETGGK----LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKN--------------KAVFTIR--KIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +L R G G TG +T+ Y N + + ETE Q+LIKW+ WS+IH+TWESE T++ + GMKKL F + +K + W+++ A PED+D + + E LL+ +RII + + +YL KW++L Y STWE ++++ + +F +R S P+R C + RPKF+ I+ QP++LS S + LRDYQ+DG+NWL H+W + NSVILADEMGLGKTIQTI FL LF H ++GPFL VVPLST+++WQ EF++WAP MN++ Y GD SR++I++ EW F K LKF+ +TTYE++LKDK +L + WA L VDEAHRLKND+S LY L FDTN RLLITGTP+ NSL+ELWALLHFIMPDKF+TW +FE ++ ++ + L++ LEP++LRR KKDVEKSLP+K EQI+RV M Q + YK ILTKN++AL K RG TS+FLNIV+ELKKCCNH L+ P + E + D L+ +K SGK++LLDKL+ LKE GHRVLIFSQMVRMLD+++DYL R + FQRLDGSIKG +R+QA+DHFNAEGS DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQK QV++YR V S+EE+I+E AK+KMVLDHLVIQRMD+ D + N PF+KD+L+ ILKFGA +LF ++E D++ +I +IL+RAET N D E PA+DLLSAFKV +I +++ +D G + K W DI+P+ R+ I ++E K + +L L PR++ Y++G S + + + T + TD E++ I+ KKFP PL R+++I +AE+ + E+ + + + + C E EE K +A F+++ + + K +L +L L++I+P EER ++ +T+ + W E+D +LL G+++ G+ +WE +K+D LKLT KIL + + +PQA L+TR EYLLK ++ Sbjct: 323 ILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMK-AKGMKKLDNFIKKEKEQAYWRRY-AGPEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDAALVLRK-WQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS--SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHG-----NAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMG-LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPEM--PADDLLSAFKVASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPPRRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKITGFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQQWSFNIKTRAPVFDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND-TRKPQAKQLQTRAEYLLKIIK 1384 HSP 2 Score: 55.4546 bits (132), Expect = 4.890e-7 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 4010 LFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 +F++C ++M+P+K LK L+ + ++ + DCLL IG I V LN + +K++WR+ LW FV+ F ++ K L +IYK A K+ Sbjct: 1509 IFNECKEKMRPVKKALKALDQPDVSLSDQDQL--QHTRDCLLQIGKQI-DVCLNPYAETEKKEWRSNLWYFVSKFTELDAKR-LFKIYKHALKQ 1598
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Match: Chd1 (gene:FBgn0250786 transcript:FBtr0331654) HSP 1 Score: 907.131 bits (2343), Expect = 0.000e+0 Identity = 496/1076 (46.10%), Postives = 683/1076 (63.48%), Query Frame = 2 Query: 668 VLNFRIGFVGNTGIETSYY----NKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKN------QPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNI-------TETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKA-------------------------YQVGQVNXXXXXXXXXDNKETGGK----LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKN--------------KAVFTIR--KIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +L R G G TG +T+ Y N + + ETE Q+LIKW+ WS+IH+TWESE T++ + GMKKL F + +K + W+++ A PED+D + + E LL+ +RII + + +YL KW++L Y STWE ++++ + +F +R S P+R C + RPKF+ I+ QP++LS S + LRDYQ+DG+NWL H+W + NSVILADEMGLGKTIQTI FL LF H ++GPFL VVPLST+++WQ EF++WAP MN++ Y GD SR++I++ EW F K LKF+ +TTYE++LKDK +L + WA L VDEAHRLKND+S LY L FDTN RLLITGTP+ NSL+ELWALLHFIMPDKF+TW +FE ++ ++ + L++ LEP++LRR KKDVEKSLP+K EQI+RV M Q + YK ILTKN++AL K RG TS+FLNIV+ELKKCCNH L+ P + E + D L+ +K SGK++LLDKL+ LKE GHRVLIFSQMVRMLD+++DYL R + FQRLDGSIKG +R+QA+DHFNAEGS DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQK QV++YR V S+EE+I+E AK+KMVLDHLVIQRMD+ D + N PF+KD+L+ ILKFGA +LF ++E D++ +I +IL+RAET N D E PA+DLLSAFKV +I +++ +D G + K W DI+P+ R+ I ++E K + +L L PR++ Y++G S + + + T + TD E++ I+ KKFP PL R+++I +AE+ + E+ + + + + C E EE K +A F+++ + + K +L +L L++I+P EER ++ +T+ + W E+D +LL G+++ G+ +WE +K+D LKLT KIL + + +PQA L+TR EYLLK ++ Sbjct: 323 ILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMK-AKGMKKLDNFIKKEKEQAYWRRY-AGPEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDAALVLRK-WQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS--SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHG-----NAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMG-LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPEM--PADDLLSAFKVASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPPRRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKITGFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQQWSFNIKTRAPVFDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND-TRKPQAKQLQTRAEYLLKIIK 1384 HSP 2 Score: 55.4546 bits (132), Expect = 4.930e-7 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 4010 LFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 +F++C ++M+P+K LK L+ + ++ + DCLL IG I V LN + +K++WR+ LW FV+ F ++ K L +IYK A K+ Sbjct: 1509 IFNECKEKMRPVKKALKALDQPDVSLSDQDQL--QHTRDCLLQIGKQI-DVCLNPYAETEKKEWRSNLWYFVSKFTELDAKR-LFKIYKHALKQ 1598
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Match: Chd1 (gene:FBgn0250786 transcript:FBtr0305980) HSP 1 Score: 907.131 bits (2343), Expect = 0.000e+0 Identity = 496/1076 (46.10%), Postives = 683/1076 (63.48%), Query Frame = 2 Query: 668 VLNFRIGFVGNTGIETSYY----NKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKN------QPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNI-------TETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKA-------------------------YQVGQVNXXXXXXXXXDNKETGGK----LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKN--------------KAVFTIR--KIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +L R G G TG +T+ Y N + + ETE Q+LIKW+ WS+IH+TWESE T++ + GMKKL F + +K + W+++ A PED+D + + E LL+ +RII + + +YL KW++L Y STWE ++++ + +F +R S P+R C + RPKF+ I+ QP++LS S + LRDYQ+DG+NWL H+W + NSVILADEMGLGKTIQTI FL LF H ++GPFL VVPLST+++WQ EF++WAP MN++ Y GD SR++I++ EW F K LKF+ +TTYE++LKDK +L + WA L VDEAHRLKND+S LY L FDTN RLLITGTP+ NSL+ELWALLHFIMPDKF+TW +FE ++ ++ + L++ LEP++LRR KKDVEKSLP+K EQI+RV M Q + YK ILTKN++AL K RG TS+FLNIV+ELKKCCNH L+ P + E + D L+ +K SGK++LLDKL+ LKE GHRVLIFSQMVRMLD+++DYL R + FQRLDGSIKG +R+QA+DHFNAEGS DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQK QV++YR V S+EE+I+E AK+KMVLDHLVIQRMD+ D + N PF+KD+L+ ILKFGA +LF ++E D++ +I +IL+RAET N D E PA+DLLSAFKV +I +++ +D G + K W DI+P+ R+ I ++E K + +L L PR++ Y++G S + + + T + TD E++ I+ KKFP PL R+++I +AE+ + E+ + + + + C E EE K +A F+++ + + K +L +L L++I+P EER ++ +T+ + W E+D +LL G+++ G+ +WE +K+D LKLT KIL + + +PQA L+TR EYLLK ++ Sbjct: 340 ILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMKA-KGMKKLDNFIKKEKEQAYWRRY-AGPEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDAALVLRK-WQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS--SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHG-----NAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMG-LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPEM--PADDLLSAFKVASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPPRRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKITGFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQQWSFNIKTRAPVFDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND-TRKPQAKQLQTRAEYLLKIIK 1401 HSP 2 Score: 55.4546 bits (132), Expect = 5.237e-7 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 4010 LFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 +F++C ++M+P+K LK L+ + ++ + DCLL IG I V LN + +K++WR+ LW FV+ F ++ K L +IYK A K+ Sbjct: 1526 IFNECKEKMRPVKKALKALDQPDVSLSDQDQL--QHTRDCLLQIGKQI-DVCLNPYAETEKKEWRSNLWYFVSKFTELDAKR-LFKIYKHALKQ 1615
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Match: Chd3 (gene:FBgn0023395 transcript:FBtr0074998) HSP 1 Score: 500.745 bits (1288), Expect = 1.120e-156 Identity = 296/737 (40.16%), Postives = 426/737 (57.80%), Query Frame = 2 Query: 776 ETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSV---KIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPK---------KKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFX-XXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDED 2947 E R+Y IKW S+ H W E + + Q+R ++ + +D D E + + + +R+I+ N ++ YL+KW+ L Y S+WE + L N I ++ RS + +R + K+ +QP +L + +KL +Q++GV+WL ++W +G ILADEMGLGKTIQT+ FL LF + GPFL+ VPLST+++W+ E +WAP + + Y G +R VIR+ E F + + KF+V +T+YE + D +L I WA L VDEAHRL++++S+ + L + +LL+TGTP+ N+L EL+ LL+F+ KFN F+ + + EE V L+++LEP +LRR K DV KS+P KSE I+RV + Q + YK ILTKN++AL+++ G S LNI+M+L+KCCNH L EE + K+SGK+ LL K++ +LK HRVL+FSQM +ML+++ +L G+ + R+DGSIKG LR++AID FN S F FLLSTRAGGLGINLATADTVIIFDSDWNP ND+QA +RAHR+GQK++V +YRFV NS+EE+I++ AK KM+L HLV+ R FSKDEL +IL+FG DLF E + + D+L R T +E + AN+ LS+FKV + T ED + Sbjct: 108 EKRREYFIKWHGMSYWHCEWIPEGQMLLHH-------ASMVASFQRRSDMEEPSLEELDDQDGNLHERFYRYGIKPEWLLVQRVINHSEEPNGGTM-YLVKWRELSYNDSSWERESDSIPGL--NQAIALYKKLRSSNKGRQRDRPAPTIDLNKKY---EDQPVFLKE-AGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFT----DVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVV--------RPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDR--TNRGIEEKESWANEYLSSFKVASYA-TKEDHE 815
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Match: Mi-2 (gene:FBgn0262519 transcript:FBtr0100394) HSP 1 Score: 514.998 bits (1325), Expect = 7.860e-153 Identity = 309/778 (39.72%), Postives = 450/778 (57.84%), Query Frame = 2 Query: 767 NSDETERQYLIKWREWSHIHSTWESET--------TVQTYQNFDGMKKLLKFKE------IQKRREIWKKHHASPEDLDAAQFEEER--NESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIP------------------------NRKCEALTRRPKFAPI------REQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKM------------LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXX--XXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVN 2920 NS+ R+Y IKW S+ H W E ++++Q M++ KF+E + +R K + D A+ EER + + + +R+I+ + ++ ++ YL+KW+ L Y STWE ++ L I++ + R+V +R + T P+ +QP +L T M+L YQ++G+NWL ++W +G ILADEMGLGKTIQT+ FL L+ + GPFL+ VPLST+ +W+ EF +WAP I Y GD SR VIRE E F + + KF+V +T+YEL+ D L I WA L VDEAHRLK+++S+ + L ++ +LL+TGTP+ N+L EL+ LL+F+ DKFN F+ + + EE V L+++L P +LRR K DV K++PSKSE I+RV + Q + YK ILTKNYEAL+ ++ G + S +NI+M+LKKCCNH L EE + K++GK++LL K++ +LK + HRVLIFSQM +MLDI+ D+L + ++R+DG I G+LR++AID FNA G+ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ +V +YRFV +NS+EE++ + AKRKM+L HLV+ R K F+K EL++IL+FG DLF +D++ + + + ++L R T +E + AN+ LS+FKV + Sbjct: 516 NSNSRVREYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTM-YLVKWRELPYDKSTWEEEGDDIQGL--RQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTG-MQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF----ADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV--------RPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDR--TNRGIEEKESWANEYLSSFKVAS 1275
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Match: chd1 (chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]) HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0 Identity = 525/1063 (49.39%), Postives = 702/1063 (66.04%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN---------------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSE--CDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 +E +E V+ RIG G TG T+ Y + N D N E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL FK+ ++ ++ W K ASPED++ ++E + L Q ERII K++ DYL KW+ L Y +WE G +I K F I E+ R++ IP+R C+ L +RP+F P+++QP Y+ ++LRDYQLDG+NW+AH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E +WAP MN+++Y GD SR +IR EW P+ K LK ++ +TTYE+LLKDK +L +SWAF+GVDEAHRLKND+S LY +I F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W FE+ + + + + L+K LEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+ALSK T+G TS FLNI+MELKKCCNH L+ P D+ E N+ + HL ++SSGK++LLDKL+ LKE+GHRVLIFSQMVRMLDI+++YL R + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE+IIE AK+KMVLDHLVIQRMD+ LH + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET +D +LLS FKV N + EDE+I + + W DI+P+D R +++EEE QK L E+ L PR RK K Q+N E N +E TD EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC E C E + F I + ++ K ++ ++L LH+ +P + EER ++++P +K A++ W EDD+ LL+G++E G +WE IKMD DL LT K+LP ++PQA L+TR +YL+K L Sbjct: 257 DEFETLERVMEMRIGRKGVTGAVTTVYAVEADGDPNANFDPNRQPGEVQYLIKWKNWSHIHNTWETEETLKQ-QNVKGMKKLDNFKKKEQEKKKWLKA-ASPEDVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALISKK-FQKCIDEYMSRNQCKTIPSRDCKVLKQRPRFVPMKKQPHYIG-GEGLELRDYQLDGLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWAPLMNVVVYLGDINSRNMIRTHEWMHPQTKRLKLNILLTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWEMFEEEHG-----KGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEGLQHL---VRSSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS-MMEDEEIDMDTERND-RNWDDIIPEDHRRRLEEEERQKELAEIYLLPRMRKCAK-----QMNFNGNEGRRSRNRRYSASDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEHDLRRLAETVHNGCLRTLKENPCGPERTSGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLL 1300 HSP 2 Score: 70.0922 bits (170), Expect = 2.263e-11 Identity = 52/205 (25.37%), Postives = 96/205 (46.83%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSEVXXXXXXXXXXXXXXXXGKHDSFINKGSESVKESKTQSDKVKCNFEARSYQEYIKMKNWNGETTKTFDDNNRNEKYKPYSRSSFNDKRNDKTYKSYHDRDDKSD 4609 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + + + + + + KH + + + ES ++ ++ + Y E+ K + + K+ D R PYS S ++ Y +R ++ D Sbjct: 1396 ELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQENAQAAEQNTSTVNTQSFKH-ADVERLKESQQDESSRDSYSSDRHHSSRYHEHSKEHHASDSYRKSSDSRKR-----PYSSFSNGKDHRERERDQYRERGERPD 1591
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Match: chd1 (chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]) HSP 1 Score: 974.926 bits (2519), Expect = 0.000e+0 Identity = 526/1064 (49.44%), Postives = 702/1064 (65.98%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN---------------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSE--CDTEE-------KKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 +E +E V+ RIG G TG T+ Y + N D N E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL FK+ ++ ++ W K ASPED++ ++E + L Q ERII K++ DYL KW+ L Y +WE G +I K F I E+ R++ IP+R C+ L +RP+F P+++QP Y+ ++LRDYQLDG+NW+AH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E +WAP MN+++Y GD SR +IR EW P+ K LK ++ +TTYE+LLKDK +L +SWAF+GVDEAHRLKND+S LY +I F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W FE+ + + + + L+K LEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+ALSK T+G TS FLNI+MELKKCCNH L+ P D+ E N+ + HL ++SSGK++LLDKL+ LKE+GHRVLIFSQMVRMLDI+++YL R + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE+IIE AK+KMVLDHLVIQRMD+ LH + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET +D +LLS FKV N + EDE+I + + W DI+P+D R +++EEE QK L E+ L PR RK K Q+N E N +E TD EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC E C E K F I + ++ K ++ ++L LH+ +P + EER ++++P +K A++ W EDD+ LL+G++E G +WE IKMD DL LT K+LP ++PQA L+TR +YL+K L Sbjct: 257 DEFETLERVMEMRIGRKGVTGAVTTVYAVEADGDPNANFDPNRQPGEVQYLIKWKNWSHIHNTWETEETLKQ-QNVKGMKKLDNFKKKEQEKKKWLKA-ASPEDVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALISKK-FQKCIDEYMSRNQCKTIPSRDCKVLKQRPRFVPMKKQPHYIG-GEGLELRDYQLDGLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWAPLMNVVVYLGDINSRNMIRTHEWMHPQTKRLKLNILLTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWEMFEEEHG-----KGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEGLQHL---VRSSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS-MMEDEEIDMDTERND-RNWDDIIPEDHRRRLEEEERQKELAEIYLLPRMRKCAK-----QMNFNGNEGRRSRNRRYSASDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEHDLRRLAETVHNGCLRTLKENPCGPERTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLL 1301 HSP 2 Score: 70.4774 bits (171), Expect = 2.014e-11 Identity = 52/205 (25.37%), Postives = 96/205 (46.83%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSEVXXXXXXXXXXXXXXXXGKHDSFINKGSESVKESKTQSDKVKCNFEARSYQEYIKMKNWNGETTKTFDDNNRNEKYKPYSRSSFNDKRNDKTYKSYHDRDDKSD 4609 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + + + + + + KH + + + ES ++ ++ + Y E+ K + + K+ D R PYS S ++ Y +R ++ D Sbjct: 1480 ELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQENAQAAEQNTSTVNTQSFKH-ADVERLKESQQDESSRDSYSSDRHHSSRYHEHSKEHHASDSYRKSSDSRKR-----PYSSFSNGKDHRERERDQYRERGERPD 1675
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]) HSP 1 Score: 934.095 bits (2413), Expect = 0.000e+0 Identity = 515/1085 (47.47%), Postives = 695/1085 (64.06%), Query Frame = 2 Query: 593 ECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGND-DNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 E EG+ + Q ++ IE+V++ R G G TG T+ Y + +N G D D +E E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ + W K ASPEDL+ ++E L +Q ER+I +S +YL KW L Y TWE +I K F I F R+ S +P++ C+ L +RP+F P+++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPF++VVPLST++SWQ EF+ WAP MN+++Y GD SR+ IR+ EW P+ K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+M DKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+N++ALSK TRG +S FLNIVMELKKCCNH L+ P D E + P HL+ ++ GK++LLDKL+ LK++G+RVLIFSQMVRMLDI++DYL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL+ ILKFGA DLF + E + E + I +IL+ AE T D+ + ++LLS FKV N T D+ KP + W +I+P++ R K++EE+ QK + ++ + PR R K Q +S + ++ +G TD EI+ IK KKF PLER+++I ++E+++ + ++ + + + N C E + K+N I + ++ K+I+Q ++ + LH+ +P N ER KF L K ++ W+ DD +LL+G++E G NW+ IK D DLKL+ KIL ++PQ L+ R +YLLK L+ Sbjct: 256 EMAEGAEEQQ------DDDSETIEKVVDTRTGKKGATGASTTLY-AIEENGDPGADFDPEKEEGETQFLIKWKGWSYIHNTWESVDSL-TQQKVKGMKKLENFKKKNEELNAWLKK-ASPEDLEYYNCQQELTNDLSKQFQIIERVI--AHKSSSGEPEYLCKWMGLPYAECTWEDSALIKKK-FQACIDSFHNRNSSKTVPSKDCKVLKQRPRFVPLKKQPSYIG-DENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPEDGENDA---PQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNSSANSNSNPFNKEELSAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFTMDESTPDL-----DEKPGRDWDEIIPEEQRRKVEEEQKQKEMEDIYMLPRSRSSNKKAQANDSDSDVGSKLK--HRSSGSDSETDDSEDDKRPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVEKSIADLKRLGELVHNSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPAERNKFQLTCRVKTPHFDVDWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPEKKPQGKQLQMRTDYLLKMLK 1311 HSP 2 Score: 58.9214 bits (141), Expect = 5.897e-8 Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ + G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F + LHR+YK A KK Sbjct: 1441 ELDQETFSICKERMRPVKKALKQLD--KPDEGLSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKIWRRNLWIFVSKFTE-FGAQKLHRLYKKAQKK 1536
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]) HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0 Identity = 515/1085 (47.47%), Postives = 695/1085 (64.06%), Query Frame = 2 Query: 593 ECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGND-DNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 E EG+ + Q ++ IE+V++ R G G TG T+ Y + +N G D D +E E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ + W K ASPEDL+ ++E L +Q ER+I +S +YL KW L Y TWE +I K F I F R+ S +P++ C+ L +RP+F P+++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPF++VVPLST++SWQ EF+ WAP MN+++Y GD SR+ IR+ EW P+ K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+M DKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+N++ALSK TRG +S FLNIVMELKKCCNH L+ P D E + P HL+ ++ GK++LLDKL+ LK++G+RVLIFSQMVRMLDI++DYL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL+ ILKFGA DLF + E + E + I +IL+ AE T D+ + ++LLS FKV N T D+ KP + W +I+P++ R K++EE+ QK + ++ + PR R K Q +S + ++ +G TD EI+ IK KKF PLER+++I ++E+++ + ++ + + + N C E + K+N I + ++ K+I+Q ++ + LH+ +P N ER KF L K ++ W+ DD +LL+G++E G NW+ IK D DLKL+ KIL ++PQ L+ R +YLLK L+ Sbjct: 260 EMAEGAEEQQ------DDDSETIEKVVDTRTGKKGATGASTTLY-AIEENGDPGADFDPEKEEGETQFLIKWKGWSYIHNTWESVDSL-TQQKVKGMKKLENFKKKNEELNAWLKK-ASPEDLEYYNCQQELTNDLSKQFQIIERVI--AHKSSSGEPEYLCKWMGLPYAECTWEDSALIKKK-FQACIDSFHNRNSSKTVPSKDCKVLKQRPRFVPLKKQPSYIG-DENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPEDGENDA---PQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNSSANSNSNPFNKEELSAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFTMDESTPDL-----DEKPGRDWDEIIPEEQRRKVEEEQKQKEMEDIYMLPRSRSSNKKAQANDSDSDVGSKLK--HRSSGSDSETDDSEDDKRPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVEKSIADLKRLGELVHNSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPAERNKFQLTCRVKTPHFDVDWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPEKKPQGKQLQMRTDYLLKMLK 1315 HSP 2 Score: 59.3066 bits (142), Expect = 5.062e-8 Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ + G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F + LHR+YK A KK Sbjct: 1445 ELDQETFSICKERMRPVKKALKQLD--KPDEGLSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKIWRRNLWIFVSKFTE-FGAQKLHRLYKKAQKK 1540
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Match: chd5 (chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]) HSP 1 Score: 523.857 bits (1348), Expect = 2.135e-158 Identity = 311/787 (39.52%), Postives = 437/787 (55.53%), Query Frame = 2 Query: 782 ERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQK------ME--------------CERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNL---------FPNGIIEFEERSRSVKIPNRKCEALTRRPKFAP---------IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF--------------PKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXX---------------XXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAED 2941 ERQ +KW S+ H +W SE ++ Y + ++ Q++ ++ P D EEE N + K ME RI++ +K+ D + YLIKW+ L Y +WE+ D V + N ++ + + R E + RR +QP Y+ T L YQL+G+NWL +W +G ILADEMGLGKT+QTI FL L+ + GPFL+ PLSTI +W+ EF +WAP ++ YTGD SR +IRE E+ F K +KFHV +T+YEL+ D+ L I+WA L VDEAHRLKN++S+ + L + +LL+TGTP+ N+L EL+ LL+F+ P++FN F + + + E+ + +L+ +L P +LRR K DV K++P+K+E I+RV + Q + YK ILT+N+EAL+ + G+ S LNI+M+LKKCCNH L E + +KSSGK+ LL K++ +LK+ GHRVLIFSQM +MLD++ D+L G+ ++R+DG I G LR++AID FNA G+ FCFLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ ++V +YRFV + S+EE+I + AKRKM+L HLV+ R +K SK EL++ILKFG +LF D E I +L R++ D E N N+ LS+FKV ED Sbjct: 93 ERQLFVKWAGLSYWHCSWVSELQLELYHT-------VMYRNYQRKNDM-----DEPPPYDYGSGEEELNNEKRRSKDPQYAAMEERFYRYGIKPEWLIIHRILNHSFDKDGD-VQYLIKWRDLPYDQCSWEADDFDVPDYDSLKQAYWDHRNQVLGENHQPLLFRKGKRPKEEMKRREPPPDTPVVDPTIKFEQQPWYIDDTGGT-LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLIKLKDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV--------RPGLGSKTGSMSKQELDDILKFGTEELFKDDVEAARTMGDNKEGEEVSVIHYDDNAISKLLDRSQDATEDTEIQN-MNEYLSSFKVAQYVVREED 852
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000053481.1 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:100497210]) HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0 Identity = 567/1280 (44.30%), Postives = 788/1280 (61.56%), Query Frame = 2 Query: 629 SEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNS----------------DSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQ----PFSKDELNEILKFGAADLFXXXXXXX-XXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQR----------------KKVKAYQVGQVNXXXXXXXXXDNKETGGK-----------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHVTNPKSAEFVESSDNSSRXXXXXXXXXXXXXXXXXXXXXXXXXRESKSHGDDDHEHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 +E + + IE+VL+ RIG G G T+ Y + + +DE E+QYLIKW+ WS+IH TWESE ++Q Q G+KKL FK+ ++ + W SPED++ ++E L +Q ER+I + +K+S + +YL KW L Y +WE G ++ K F + I F R+ S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+ H ++GPFLLVVPLST++SWQ EF +WAP +N+++Y GD SR IRE EW + K +KF+ +TTYE+LLKDK L+ I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFED++ + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV MC Q + Y+ ILT+NY+ALSK TRG TS FLNIVMELKKCCNH L+ P + E E+++D L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD+ D N PF+KDEL ILKFGAADLF + E + E QE++I +IL+ AE T ++ S + ++LLS FKV N E+ ++V + + W DI+P+ R+K++EE QK L E+ + PR R K KA + S S++S ++ + G+ TD EI+ IK KKF PLER++ I +AE+++ + ++ + + + N C + E + + K+N A I + ++VK I+Q +D ++L + +P + EE+ KF + K A++ W EDD+ LL+G++E G NWE IK D +LKL+ KILP ++PQA HL+TR +YLLK L+ + K + + + N +++P+ SDN+S + + K K K++ + S E ++ F C +RM+P+K LK L++ + G ++ + CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 256 AEELEDSHETIEKVLDSRIGKKGAIGASTTVYATEENGDPNSEFNPETDEREQQYLIKWKGWSYIHGTWESEDSLQQ-QKVKGLKKLENFKKKEEEIKQWLSK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKWMGLPYSECSWEDGALVGKK-FQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYIG-GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELWSLLHFIMPEKFECWEDFEDQHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLD---SLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAE-TRENEPSSSATDELLSQFKVANFATMEEEPEMVL----KREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNKKPQANDSESDLESKQKAQRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRRFIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPADGKGPGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKKFNVVSRVKAAHFDVEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLLKMLKKEMEKETGAAEEPKSKKRKPRAKKDSGKTKDEHGNDISSPR------HSDNNSEEGEEKAKRGEAKPGGKNRKNQGPVHITAGSEPVPIGEEEEDDLDQETFSICKERMRPVKKALKQLDNADK--GLSVQEQLEHTRTCLLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1509
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000053510.1 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:100497210]) HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0 Identity = 564/1240 (45.48%), Postives = 773/1240 (62.34%), Query Frame = 2 Query: 167 LLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNS----------------DSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQ----PFSKDELNEILKFGAADLFXXXXXXX-XXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQR----------------KKVKAYQVGQVNXXXXXXXXXDNKETGGK-----------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +L +E PD+Y RRS R+R+EPSRFNI +E + L +K+ ST++ S R KK RK+A ++ D+D Q +++ AK + + D + LI + GE + E +E S++ IE+VL+ RIG G G T+ Y + + +DE E+QYLIKW+ WS+IH TWESE ++Q Q G+KKL FK+ ++ + W SPED++ ++E L +Q ER+I + +K+S + +YL KW L Y +WE G ++ K F + I F R+ S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+ H ++GPFLLVVPLST++SWQ EF +WAP +N+++Y GD SR IRE EW + K +KF+ +TTYE+LLKDK L+ I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFED++ + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV MC Q + Y+ ILT+NY+ALSK TRG TS FLNIVMELKKCCNH L+ P + E E+++D L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD+ D N PF+KDEL ILKFGAADLF + E + E QE++I +IL+ AE T ++ S + ++LLS FKV N E+ ++V + + W DI+P+ R+K++EE QK L E+ + PR R K KA + S S++S ++ + G+ TD EI+ IK KKF PLER++ I +AE+++ + ++ + + + N C + E + + K+N A I + ++VK I+Q +D ++L + +P + EE+ KF + K A++ W EDD+ LL+G++E G NWE IK D +LKL+ KILP ++PQA HL+TR +YLLK L+ Sbjct: 41 VLQMWEEYPDVYGVRRSNRSRQEPSRFNIKAE--VRKKNLPKKLAKSSTNK-----------LKRSLRGKK---------RKQASSEEEDDDDDDDDDDETPKRQTRRRAAK---NVSYKEDDDFETDSDDLIEMVGE--EAEELEDSHE-------------TIEKVLDSRIGKKGAIGASTTVYATEENGDPNSEFNPETDEREQQYLIKWKGWSYIHGTWESEDSLQQ-QKVKGLKKLENFKKKEEEIKQWLSK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKWMGLPYSECSWEDGALVGKK-FQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYIG-GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELWSLLHFIMPEKFECWEDFEDQHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLD---SLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAE-TRENEPSSSATDELLSQFKVANFATMEEEPEMVL----KREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNKKPQANDSESDLESKQKAQRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRRFIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPADGKGPGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKKFNVVSRVKAAHFDVEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLLKMLK 1223 HSP 2 Score: 59.3066 bits (142), Expect = 6.752e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L++ + G ++ + CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1364 FSICKERMRPVKKALKQLDNADK--GLSVQEQLEHTRTCLLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1453
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000053494.1 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:100497210]) HSP 1 Score: 970.304 bits (2507), Expect = 0.000e+0 Identity = 563/1239 (45.44%), Postives = 771/1239 (62.23%), Query Frame = 2 Query: 185 ENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNT-----GIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNS----------------DSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQ----PFSKDELNEILKFGAADLFXXXXXXX-XXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQR----------------KKVKAYQVGQVNXXXXXXXXXDNKETGGK-----------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 E PD+Y RRS R+R+EPSRFNI +E + L +K+ ST++ S R KK RK+A ++ D+D Q +++ AK + + D + LI + GE + E +E S++ IE+VL+ RIG G+ G T+ Y + + +DE E+QYLIKW+ WS+IH TWESE ++Q Q G+KKL FK+ ++ + W SPED++ ++E L +Q ER+I + +K+S + +YL KW L Y +WE G ++ K F + I F R+ S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+ H ++GPFLLVVPLST++SWQ EF +WAP +N+++Y GD SR IRE EW + K +KF+ +TTYE+LLKDK L+ I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFED++ + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV MC Q + Y+ ILT+NY+ALSK TRG TS FLNIVMELKKCCNH L+ P + E E+++D L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD+ D N PF+KDEL ILKFGAADLF + E + E QE++I +IL+ AE T ++ S + ++LLS FKV N E+ ++V + + W DI+P+ R+K++EE QK L E+ + PR R K KA + S S++S ++ + G+ TD EI+ IK KKF PLER++ I +AE+++ + ++ + + + N C + E + + K+N A I + ++VK I+Q +D ++L + +P + EE+ KF + K A++ W EDD+ LL+G++E G NWE IK D +LKL+ KILP ++PQA HL+TR +YLLK L+ Sbjct: 25 EYPDVYGVRRSNRSRQEPSRFNIKAE--VRKKNLPKKLAKSSTNK-----------LKRSLRGKK---------RKQASSEEEDDDDDDDDDDETPKRQTRRRAAK---NVSYKEDDDFETDSDDLIEMVGE--EAEELEDSHE-------------TIEKVLDSRIGKKGDMNTAAIGASTTVYATEENGDPNSEFNPETDEREQQYLIKWKGWSYIHGTWESEDSLQQ-QKVKGLKKLENFKKKEEEIKQWLSK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKWMGLPYSECSWEDGALVGKK-FQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYIG-GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELWSLLHFIMPEKFECWEDFEDQHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLD---SLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAE-TRENEPSSSATDELLSQFKVANFATMEEEPEMVL----KREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNKKPQANDSESDLESKQKAQRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRRFIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPADGKGPGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKKFNVVSRVKAAHFDVEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLLKMLK 1206 HSP 2 Score: 59.3066 bits (142), Expect = 6.856e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L++ + G ++ + CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1347 FSICKERMRPVKKALKQLDNADK--GLSVQEQLEHTRTCLLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1436
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000053518.1 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:100497210]) HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0 Identity = 523/1069 (48.92%), Postives = 708/1069 (66.23%), Query Frame = 2 Query: 614 DDQRMSEFISEEVN-------VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERII-DAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQ----PFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQR---KKVKAYQVGQVNXXXXXXXXXDNKETGGK-----------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 D + E + EE IE+VL+ RIG G G T+ Y + + +DE E+QYLIKW+ WS+IH TWESE ++Q Q G+KKL FK+ ++ + W SPED++ ++E L +Q ER+I +++ +S+ +YL KW L Y +WE G ++ K F + I F R+ S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+ H ++GPFLLVVPLST++SWQ EF +WAP +N+++Y GD SR IRE EW + K +KF+ +TTYE+LLKDK L+ I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFED++ + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV MC Q + Y+ ILT+NY+ALSK TRG TS FLNIVMELKKCCNH L+ P + E E+++D L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD+ D N PF+KDEL ILKFGAADLF + E + E + I +IL+ AE T ++ S + ++LLS FKV N E+ ++V + + W DI+P+ R+K++EE QK L E+ + PR R KKV+A + S S++S ++ + G+ TD EI+ IK KKF PLER++ I +AE+++ + ++ + + + N C + E + + K+N A I + ++VK I+Q +D ++L + +P + EE+ V K A++ W EDD+ LL+G++E G NWE IK D +LKL+ KILP ++PQA HL+TR +YLLK L+ Sbjct: 4 DSDDLIEMVGEEAEELEDSHETIEKVLDSRIGKKGAIGASTTVYATEENGDPNSEFNPETDEREQQYLIKWKGWSYIHGTWESEDSLQQ-QKVKGLKKLENFKKKEEEIKQWLSK-VSPEDVEYFSCQQELASELNKQYQIVERVIVHSRKTSSSNEPEYLCKWMGLPYSECSWEDGALVGKK-FQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYIG-GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELWSLLHFIMPEKFECWEDFEDQHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLDS---LQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAE-TRENEPSSSATDELLSQFKVANFATMEEEPEMVL----KREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNKKVRARRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRRFIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPADGMFGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKNRV-----KAAHFDVEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLLKMLK 1050 HSP 2 Score: 59.3066 bits (142), Expect = 7.535e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L++ + G ++ + CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1131 FSICKERMRPVKKALKQLDNADK--GLSVQEQLEHTRTCLLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1220
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000053490.1 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:100497210]) HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0 Identity = 523/1086 (48.16%), Postives = 709/1086 (65.29%), Query Frame = 2 Query: 629 SEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNS----------------DSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQ----PFSKDELNEILKFGAADLFXXXXXXX-XXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQR----------------KKVKAYQVGQVNXXXXXXXXXDNKETGGK-----------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +E + + IE+VL+ RIG G G T+ Y + + +DE E+QYLIKW+ WS+IH TWESE ++Q Q G+KKL FK+ ++ + W SPED++ ++E L +Q ER+I + +K+S + +YL KW L Y +WE G ++ K F + I F R+ S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+ H ++GPFLLVVPLST++SWQ EF +WAP +N+++Y GD SR IRE EW + K +KF+ +TTYE+LLKDK L+ I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFED++ + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV MC Q + Y+ ILT+NY+ALSK TRG TS FLNIVMELKKCCNH L+ P + E E+++D L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD+ D N PF+KDEL ILKFGAADLF + E + E QE++I +IL+ AE T ++ S + ++LLS FKV N E+ ++V + + W DI+P+ R+K++EE QK L E+ + PR R K KA + S S++S ++ + G+ TD EI+ IK KKF PLER++ I +AE+++ + ++ + + + N C + E + + K+N A I + ++VK I+Q +D ++L + +P + EE+ KF + K A++ W EDD+ LL+G++E G NWE IK D +LKL+ KILP ++PQA HL+TR +YLLK L+ Sbjct: 179 AEELEDSHETIEKVLDSRIGKKGAIGASTTVYATEENGDPNSEFNPETDEREQQYLIKWKGWSYIHGTWESEDSLQQ-QKVKGLKKLENFKKKEEEIKQWLSK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKWMGLPYSECSWEDGALVGKK-FQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYIG-GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELWSLLHFIMPEKFECWEDFEDQHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLD---SLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAE-TRENEPSSSATDELLSQFKVANFATMEEEPEMVL----KREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNKKPQANDSESDLESKQKAQRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRRFIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPADGKGPGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKKFNVVSRVKAAHFDVEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLLKMLK 1247 HSP 2 Score: 59.3066 bits (142), Expect = 6.940e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L++ + G ++ + CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1387 FSICKERMRPVKKALKQLDNADK--GLSVQEQLEHTRTCLLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1476
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Match: Chd2 (chromodomain helicase DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:2448567]) HSP 1 Score: 949.503 bits (2453), Expect = 0.000e+0 Identity = 529/1078 (49.07%), Postives = 703/1078 (65.21%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVN-PLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXX-XXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXD---------------------------NKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY-----------SECDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE+VL+ R+G G TG T+ Y + + D +E E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL S ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P D E E+ + L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + + E E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q +S +E + K+ TD EI+ IK KKF PLER++ I +AE++D + ++ + + I N C + SE K+ I + ++VK+I+Q ++ ++LH+ +P + EE+ K+ L K A++ W EDD+RLL+G++E G NWE IK D +LKLT KILP ++PQ L+TRV+YLLK LR Sbjct: 262 TIEKVLDSRLGKKGATGASTTVYAVEANGDPSDDFDTEREEGEVQYLIKWKGWSYIHSTWESEDSLQQ-QKVKGLKKLENFKKKEDEVKQWLGK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGES-LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAPEDSERESGQEV---LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKESTSEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRVDYLLKLLR 1322 HSP 2 Score: 58.9214 bits (141), Expect = 6.220e-8 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L+ + G ++ + +CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1469 FSICKERMRPVKKALKQLDKPDK--GLSVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1558
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Match: Chd1 (chromodomain helicase DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:88393]) HSP 1 Score: 929.087 bits (2400), Expect = 0.000e+0 Identity = 515/1058 (48.68%), Postives = 695/1058 (65.69%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN----------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY--SECDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 EE IE V++ R+G G TG T+ Y + + N + + QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ L DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW P+ K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ + ++LLS FKV N + DED + + + K W +I+P++ R +++EEE QK L E+ + PR R K S +E +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC S TE + F I + ++ K ++ D+L LH+ +P + EER ++ +P TK A++ W EDD+ LL+G++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 267 EEFETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKK-FQTCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDSSSGTERAGGRLGKVKGPTFRISGVQVNAKLVIAHEDELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL 1311 HSP 2 Score: 66.6254 bits (161), Expect = 3.311e-10 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1408 ELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1505
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Match: Chd1 (chromodomain helicase DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:88393]) HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0 Identity = 430/793 (54.22%), Postives = 564/793 (71.12%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVP 3001 EE IE V++ R+G G TG T+ Y + + N + + QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ L DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW P+ K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ + ++LLS FKV N + DED + + + K W +I+P Sbjct: 267 EEFETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKK-FQTCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIP 1046
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Match: Chd3 (chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]) HSP 1 Score: 522.702 bits (1345), Expect = 7.844e-156 Identity = 307/766 (40.08%), Postives = 447/766 (58.36%), Query Frame = 2 Query: 779 TERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREI--------------WKKHHASPEDLDAAQFEEERNESLLQQK-MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNG--------IIEFEERSRSVKIPNRKCEALTRRPKFAPIRE-------QPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF--------------PKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXX---------XXIQDILQRAETTNHDDESHNPANDLLSAFKVV 2917 +ER++ +KW S+ H +W E ++ + L+ ++ Q++ ++ K +D A+ EE+ ++ + M RII+ +K + YL+KWK L Y STWE ++ + + +I E+ ++ K +K E P +P + QP +++ T L YQL+G+NWL +W +G ILADEMGLGKTIQTI FL L+ + GPFL+ PLSTI +W+ EF +WAP ++ YTGD SR +IRE E+ F ++ +KFHV +T+YEL+ D+ L I WA L VDEAHRLKN++S+ + L + + +LL+TGTP+ N+L EL+ LL+F+ P++FN F + + + E+ + +L+ +L P +LRR K DV K++P+K+E I+RV + Q + YK ILT+N+EAL+ G+ S LNI+M+LKKCCNH L E+ IKSSGK++LL K++ +LKE+GHRVLIFSQM +MLD++ D+L G+ ++R+DG I G+LR++AID FNA G+ FCFLLSTRAGGLGINLATADTVIIFDSDWNP ND+QA +RAHRIGQ +V +YRFV + S+EE+I + AKRKM+L HLV+ R +K SK EL++ILKFG +LF + E + ++E I +L R + D + N N+ LS+FKV Sbjct: 505 SEREFFVKWVGLSYWHCSWAKELQLEIFH-------LVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGN-YHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGT-LHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV--------RPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQN-MNEYLSSFKVA 1248
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Match: Chd5 (chromodomain helicase DNA binding protein 5 [Source:MGI Symbol;Acc:MGI:3036258]) HSP 1 Score: 521.931 bits (1343), Expect = 1.961e-155 Identity = 309/780 (39.62%), Postives = 450/780 (57.69%), Query Frame = 2 Query: 782 ERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAA----QFEEERNESLLQQKME--------------CERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIV-------KNLFPNGIIEFEERSR----SVKIPNRKCEALTRRPKFAPIRE-------QPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP--------------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFX----------XXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAED 2941 ER++ +KW S+ H +W E ++ Y + ++ Q++ ++ P D + + E+ +N+ L KME RI++ +K D + YLIKWK L Y TWE +I + + + + + E +R VK + + +P PI + QP Y+ T L YQL+G+NWL +W +G ILADEMGLGKT+QTI FL L+ + GP+L+ PLSTI +W+ EF +WAP ++ YTGD SR VIRE E+ F K+ +KFHV +T+YEL+ D+ L I WA L VDEAHRLKN++S+ + L ++ + +LL+TGTP+ N+L EL+ LL+F+ P++FN F + + + E+ + +L+ +L P +LRR K DV K++P+K+E I+RV + + Q + YK ILT+N+EAL+ + G+ S LNI+M+LKKCCNH L E + +KSSGK+MLL K++ +L+++GHRVLIFSQM +MLD++ D+L G+ ++R+DG I G LR++AID FNA G+ FCFLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ ++V +YRFV + S+EE+I + AKRKM+L HLV+ R +K+ +K EL++ILKFG +LF +D + + I +L R + D E N N+ LS+FKV ED Sbjct: 510 EREFFVKWAGLSYWHCSWVKELQLELYHT-------VMYRNYQRKNDM---DEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGD-IHYLIKWKDLPYDQCTWEIDEIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDATGGT-LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV--------RPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN-MNEYLSSFKVAQYVVREED 1264
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Match: sp|O14647|CHD2_HUMAN (Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens OX=9606 GN=CHD2 PE=1 SV=2) HSP 1 Score: 953.74 bits (2464), Expect = 0.000e+0 Identity = 532/1078 (49.35%), Postives = 708/1078 (65.68%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXX-XXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVG----------QVNXXXXXXXXXDNKETGGK-----------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKA-----------VFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE+VL+ R+G G TG T+ Y + G+ D DE E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL +++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P +E E EN + L I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + + E E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q Q +S SE ++ + K TD EI+ IK KKF PLER++ I +AE++D + ++ + + I N C + E + + K+N + I + ++VK+I+Q ++ ++LH+ +P + EE+ K+ L K A++ W EDD+RLL+G++E G NWE IK D +LKLT KILP ++PQ L+TR +YLLK LR Sbjct: 262 TIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHSTWESEESLQQ-QKVKGLKKLENFKKKEDEIKQWLGK-VSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLG-GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEI---LLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLR 1322 HSP 2 Score: 58.9214 bits (141), Expect = 4.896e-7 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L+ + G ++ + +CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1469 FSICKERMRPVKKALKQLDKPDK--GLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1558
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Match: sp|E9PZM4|CHD2_MOUSE (Chromodomain-helicase-DNA-binding protein 2 OS=Mus musculus OX=10090 GN=Chd2 PE=1 SV=1) HSP 1 Score: 949.503 bits (2453), Expect = 0.000e+0 Identity = 529/1078 (49.07%), Postives = 703/1078 (65.21%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN----------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVN-PLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXX-XXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXD---------------------------NKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY-----------SECDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE+VL+ R+G G TG T+ Y + + D +E E QYLIKW+ WS+IHSTWESE ++Q Q G+KKL FK+ + + W SPED++ ++E L +Q ER+I + +K+ S+ +YL KW L Y +WE +I K F N I F R+ S IP R+C+AL +RP+F +++QP YL S ++LRDYQL+G+NWLAH+W + NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFL+VVPLST++SWQ EF IWAP +N+++Y GD +SR IRE EW + K LKF+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF W DFE+ + + E L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+AL+K TRG TS FLNIVMELKKCCNH L+ P D E E+ + L+ I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL ++ + FQRLDGSIKG +RKQA+DHFNA+GS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA DLF + + E E QE++I +IL+ AE T ++ S + ++LLS FKV N ++E++ HK W +I+P++ R+K++EEE QK L E+ + PR R K Q +S +E + K+ TD EI+ IK KKF PLER++ I +AE++D + ++ + + I N C + SE K+ I + ++VK+I+Q ++ ++LH+ +P + EE+ K+ L K A++ W EDD+RLL+G++E G NWE IK D +LKLT KILP ++PQ L+TRV+YLLK LR Sbjct: 262 TIEKVLDSRLGKKGATGASTTVYAVEANGDPSDDFDTEREEGEVQYLIKWKGWSYIHSTWESEDSLQQ-QKVKGLKKLENFKKKEDEVKQWLGK-VSPEDVEYFSCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKK-FQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGES-LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG-----KGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAPEDSERESGQEV---LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAE-TRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKD----WDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKESTSEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRVDYLLKLLR 1322 HSP 2 Score: 58.9214 bits (141), Expect = 4.351e-7 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 4013 FDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 F C +RM+P+K LK L+ + G ++ + +CLL IG+ I + + + E + WR LW FV+ F + F LH++YK A+KK Sbjct: 1469 FSICKERMRPVKKALKQLDKPDK--GLSVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTE-FDARKLHKLYKMAHKK 1558
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Match: sp|B6ZLK2|CHD1_CHICK (Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus OX=9031 GN=CHD1 PE=1 SV=1) HSP 1 Score: 930.628 bits (2404), Expect = 0.000e+0 Identity = 513/1058 (48.49%), Postives = 697/1058 (65.88%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDE-ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN----------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGC-NAVYSECDTEEKKN-------KAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 +E IE+ ++ RIG G TG T+ Y + + + + + E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WAP MN ++Y GD SR +IR EW P+ K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D+ E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ ++LLS FKV N + DED + + + + W +I+P+ R +I+EEE QK L E+ + PR R K S +E +D EI+ IK KKF PLER+ ++ +AE++D +E ++ + + + NGC A+ +E+ F I + ++ K ++ ++L LH+ +P + EER ++V+P TK A++ W EDD+ LLVG++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 265 DEFETIEKFMDSRIGRKGATGASTTIYAVEVDGDPNAGFEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQ-QNVKGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKK-FQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNM--DEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLL 1309 HSP 2 Score: 66.6254 bits (161), Expect = 2.438e-9 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1409 ELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1506
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Match: sp|P40201|CHD1_MOUSE (Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus OX=10090 GN=Chd1 PE=1 SV=3) HSP 1 Score: 929.087 bits (2400), Expect = 0.000e+0 Identity = 515/1058 (48.68%), Postives = 695/1058 (65.69%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN----------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY--SECDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 EE IE V++ R+G G TG T+ Y + + N + + QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ L DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW P+ K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ + ++LLS FKV N + DED + + + K W +I+P++ R +++EEE QK L E+ + PR R K S +E +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC S TE + F I + ++ K ++ D+L LH+ +P + EER ++ +P TK A++ W EDD+ LL+G++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 267 EEFETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKK-FQTCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDSSSGTERAGGRLGKVKGPTFRISGVQVNAKLVIAHEDELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL 1311 HSP 2 Score: 66.6254 bits (161), Expect = 2.316e-9 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1408 ELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1505
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Match: sp|O14646|CHD1_HUMAN (Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens OX=9606 GN=CHD1 PE=1 SV=2) HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0 Identity = 511/1049 (48.71%), Postives = 689/1049 (65.68%), Query Frame = 2 Query: 671 LNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLD-EETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETG----GK------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVY--SECDTEEKKNK------AVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 ++ RIG G TG T+ Y + + N + E QYLIKW+ WSHIH+TWE+E T++ QN GMKKL +K+ + + W K+ ASPED++ ++E + L +Q ERII K++ DY KW+ L Y +WE G +I K F I E+ R++S P + C+ L +RP+F +++QP Y+ ++LRDYQL+G+NWLAH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E WA MN ++Y GD SR +IR EW + K LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W DFE+ + + E + L+K LEPFLLRR KKDVEKSLP+K EQI+R+ M Q + YK ILT+NY+ALSK ++G TS FLNI+MELKKCCNH L+ P D E NK + HL I+SSGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI+++YL R + FQRLDGSIKG LRKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K S+EE I+E AK+KMVLDHLVIQRMD+ LH + + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET ++ ++LLS FKV N + DED + + + K W +I+P+D R +++EEE QK L E+ + PR R K S ++ GK +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC S TE + F I + ++ K ++ ++L LH+ +P + EER ++ +P TK A++ W EDD+ LL+G++E G +WE IKMD DL LT KILP ++PQA L+TR +YL+K L Sbjct: 278 MDCRIGRKGATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQ-QNVRGMKKLDNYKKKDQETKRWLKN-ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKK-FQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG-----KGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNM--DEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL 1313 HSP 2 Score: 66.2402 bits (160), Expect = 2.908e-9 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1408 ELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1505
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Match: A0A075ADF9 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_00038 PE=4 SV=1) HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0 Identity = 634/1227 (51.67%), Postives = 820/1227 (66.83%), Query Frame = 2 Query: 161 RSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKP-LILIR---------------------GEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQN---FDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXX---LYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDE-LNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHD--DESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNA---VYSECDTEEKK---NKA-VFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 R L DE ++ P+LY RRS R RKEP RF ++ R R S E +++ D S+ N K + + + V+YK D S+ G ++ A T KP L+R + D E + Y D E +EE +VIEEVL + G G T+ YN L+ + + D +S+ E Q+LIKWR WSHIHSTWE+E ++++ G KKL ++ K++E A EDL+ +EEERNE +L KM+ ERI+ R+ +++ DYLIKW LDYR+ +WESG +V+ L+P + +E R RS ++PN KCE L RPKFAP+ EQPDYL ++D+KLRDYQL+G+NW+ AW R NSVILADEMGLGKTIQTIGFLS LF+++ ++GPFL+VVPLST+SSWQ E +WAP MN +IYTGD VSRQ+IRE EW ++++LKF+VCITTYE+LLKDK WL ++SWAFLGVDEAHRLKND SQLY L TFDTNTRLLITGTP+ N+++ELWALLHFIMP++F W +FE Y+++ ++ L+KVL PFLLRR KKDVE SLP K E+I+RV M ++Q +Y+LIL +NY+ L K TRGH +SF+NIVMELKKCCNH L+ P E + D +L I+ SGKM LLDKL+ LK KGHRVLIFSQMVRMLD+ISDYL LRGWGFQRLDGSI+G+LRKQA+DHFNA+GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQ +QVSVYR V + S+EEKIIE A RKMVLDHLVIQRMDSA ++ ++ SK + L EIL++GA LFN+++E E E++I DIL RAET + D E+H PAN LLS+FKVV + +D D + G K W +I+P + R ++K EE QK L+ELELGPR+RK+VKA+Q G S+ + S E+D K +L++KEI+++++ +K+F RPLERI +I +AE+ D TEKE+ +V+ ++ GC + + ++ EE + NK VF ++ I+ K +LQSL+ L+ LHQ LP+ KE R+ F LPF KL WSC W+ DD RLL GV+E G DNWEAIK+D DL L SK+LP SASERPQASH+R+RV+YLL+ L Sbjct: 58 RELRDEFEDYPELYGIRRSGRCRKEPFRFKPSDAAAARIRRKKRDSDGDSDGEGQTTDDSSD-----SQWNGKAKRPNRSVRTRGNRVNYKNAFLDDSSDESEAEGYDRRPAANNRTLQTSTQNSQQTTFQKPKGPLVRKLCSSRLAARTDFDGKQSGGSPQLSDEELADTPYQDADWGE--AEEADVIEEVLTHAVRRKGALGNPTTLYNTKLEKDLNADFDPSSEPGELQFLIKWRNWSHIHSTWETEASLKSPDRGCPVYGFKKLAAYQASLKQKEE-NMRFAEREDLETMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGK-VVRALYPPAVENYEARCRSTELPNNKCEVLHTRPKFAPLTEQPDYLGDSADLKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLSCLFHEYKLYGPFLIVVPLSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGGSRRQQVLKFNVCITTYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMKELWALLHFIMPERFPVWEEFEGSYSVAEDDPAARVDGEAFHHLHKVLRPFLLRRVKKDVESSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRGHKASFINIVMELKKCCNHAHLIAPPQENDKRLWTNDEYLWSLIRGSGKMTLLDKLLQRLKSKGHRVLIFSQMVRMLDLISDYLTLRGWGFQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLVIQRMDSAGGSRSAVSRKGETSKGQLLTEILRYGAEGLFNRNDEDVAELEVDIDDILNRAETRDTDATAEAH-PANALLSSFKVVTLDTVDDDMDSNHPLAVGPEKSWDEIIPSEFRGQLKAEEIQKTLVELELGPRRRKQVKAFQAGMDYSSDDSSEEQDGKAAPTQLSEKEIRALVRAIKRFARPLERIDAIAADAELPDRTEKELLEVVDAVLKGCQSAMEIANQAVNEEAQKPTNKGPVFQYGRVSIAAKPLLQSLEYLETLHQCLPEGGKEARMNFELPFVPKLVTWSCPWDASDDVRLLAGVYEHGYDNWEAIKLDADLGLGSKLLPMSASERPQASHIRSRVDYLLRML 1274 HSP 2 Score: 65.855 bits (159), Expect = 1.262e-6 Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 3980 EHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E F +M+GPLF KC +++ PIK K LE ++ + D KQ S +L IG++I +++ + + K W+ Y W FV F E H IYK A K+ + Sbjct: 1419 EEEFRKMRGPLFLKCKEKLLPIKKHFKHLEHLE----DSPEEDAKQFSKVVLRIGDYIHNLVHEITDKKNKHLWKGYFWEFVQIFSKKSTDELRH-IYKHAAKRRQ 1519
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Match: A0A1S8WHI8 (Protein, SNF2 family (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_10301 PE=4 SV=1) HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0 Identity = 634/1233 (51.42%), Postives = 821/1233 (66.59%), Query Frame = 2 Query: 161 RSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRA------HVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKP-LILIR---------------------GEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQN---FDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXX---LYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDE-LNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHD--DESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNA---VYSECDTEEKK---NKA-VFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 R L DE ++ P+LY RRS R RKEP RF ++ R R S E +++ + ++N K K+ R+ V+YK D S+ G ++ A T KP L+R + D E + Y D E +EE +VIEEVL + G G T+ YN L+ + + D +S+ E Q+LIKWR WSHIHSTWE+E ++++ G KKL ++ K++E A EDL+ +EEERNE +L KM+ ERI+ R+ +++ DYLIKW LDYR+ +WESG +V+ L+P + +E R RS ++PN KCE L RPKFAP+ EQPDYL ++D+KLRDYQL+G+NW+ AW R NSVILADEMGLGKTIQTIGFLS LF+++ ++GPFL+VVPLST+SSWQ E +WAP MN +IYTGD VSRQ+IRE EW ++++LKF+VCITTYE+LLKDK WL ++SWAFLGVDEAHRLKND SQLY L TFDTNTRLLITGTP+ N+++ELWALLHFIMP++F W +FE Y+++ ++ L+KVL PFLLRR KKDVE SLP K E+I+RV M ++Q +Y+LIL +NY+ L K TRGH +SF+NIVMELKKCCNH L+ P E + D +L I+ SGKM LLDKL+ LK KGHRVLIFSQMVRMLD+ISDYL LRGWGFQRLDGSI+G+LRKQA+DHFNA+GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQ +QVSVYR V + S+EEKIIE A RKMVLDHLVIQRMDSA ++ ++ SK + L EIL++GA LFN+++E E E++I DIL RAET + D E+H PAN LLS+FKVV + +D D + G K W +I+P + R ++K EE QK L+ELELGPR+RK+VKA+Q G S+ + S E+D K +L++KEI+++++ +K+F RPLERI +I +AE+ D TEKE+ +V+ ++ GC + + ++ EE + NK VF ++ I+ K +LQSL+ L+ LHQ LP+ KE R+ F LPF KL WSC W+ DD RLL GV+E G DNWEAIK+D DL L SK+LP SASERPQASH+R+RV+YLL+ L Sbjct: 38 RELRDEFEDYPELYGIRRSGRCRKEPFRFKPSDAAAARIRRKKRDSDGDSDGEGQTTDDSS---------DSQWNGKAKVPRPNRSVRTRGNRVNYKNAFLDDSSDESEAEGYDRRPAANNRTLQTSTQNSQQTTFQKPKGPLVRKLCSSRLAARTDFDGKQSGGSPQLSDEELADTPYQDADWGE--AEEADVIEEVLTHAVRRKGALGNPTTLYNTKLEKDLNADFDPSSEPGELQFLIKWRNWSHIHSTWETEASLKSPDRGCPVYGFKKLAAYQASLKQKEE-NMRFAEREDLETMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGK-VVRALYPPAVENYEARCRSTELPNNKCEVLHTRPKFAPLTEQPDYLGDSADLKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLSCLFHEYKLYGPFLIVVPLSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGGSRRQQVLKFNVCITTYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMKELWALLHFIMPERFPVWEEFEGSYSVAEDDPAARVDGEAFHHLHKVLRPFLLRRVKKDVESSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRGHKASFINIVMELKKCCNHAHLIAPPQENDKRLWTNDEYLWSLIRGSGKMTLLDKLLQRLKSKGHRVLIFSQMVRMLDLISDYLTLRGWGFQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLVIQRMDSAGGSRSAVSRKGETSKGQLLTEILRYGAEGLFNRNDEDVAELEVDIDDILNRAETRDTDATAEAH-PANALLSSFKVVTLDTVDDDMDSNHPLAVGPEKSWDEIIPSEFRGQLKAEEIQKTLVELELGPRRRKQVKAFQAGMDYSSDDSSEEQDGKAAPTQLSEKEIRALVRAIKRFARPLERIDAIAADAELPDRTEKELLEVVDAVLKGCQSAMEIANQAVNEEAQKPTNKGPVFQYGRVSIAAKPLLQSLEYLETLHQCLPEGGKEARMNFELPFVPKLVTWSCPWDASDDVRLLAGVYEHGYDNWEAIKLDADLGLGSKLLPMSASERPQASHIRSRVDYLLRML 1256 HSP 2 Score: 65.855 bits (159), Expect = 1.223e-6 Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 3980 EHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E F +M+GPLF KC +++ PIK K LE ++ + D KQ S +L IG++I +++ + + K W+ Y W FV F E H IYK A K+ + Sbjct: 1401 EEEFRKMRGPLFLKCKEKLLPIKKHFKHLEHLE----DSPEEDAKQFSKVVLRIGDYIHNLVHEITDKKNKHLWKGYFWEFVQIFSKKSTDELRH-IYKHAAKRRQ 1501
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Match: A0A4S2LRS0 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005288 PE=4 SV=1) HSP 1 Score: 1177.16 bits (3044), Expect = 0.000e+0 Identity = 623/1205 (51.70%), Postives = 814/1205 (67.55%), Query Frame = 2 Query: 161 RSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQN---FDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXX---LYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDE-LNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHD--DESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSEC------DTEEKKNKA-VFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 R L DE ++ P+LY RRS R RKEP RF ++ R ++ G + E ++ S+ N K + + + V+YK D + G ++ NN ++ ++ + + D E + Y D E +EE +VIEEVL + G G T+ YN L+ + + D +S+ E Q+LIKWR WSHIHSTWE+E ++++ G KKL ++ K +E A EDL+ +EEERNE +L KM+ ERI+ R+ +++ DYLIKW LDYR+ +WESG + V++L+ + +E R RS ++PN KCE L RPKFAP+ EQPDYL ++D+KLRDYQL+G+NW+ AW R NSVILADEMGLGKTIQTIGFL LF+++ ++GPFL+VVPLST+SSWQ E +WAP MN +IYTGD VSRQ+IRE EW ++++LKF+VCITTYE+LLKDK WL ++SWAFLGVDEAHRLKND SQLY L TFDTNTRLLITGTP+ N+++ELWALLHF MP++F W +FE Y+++ ++ L+KVL PFLLRR KKDVE SLP K E+I+RV M ++Q +Y+LIL +NY+ L K TRGH +SF+NIVMELKKCCNH L+ P E D +L I+ SGKM LLDKL+ LK KGHRVLIFSQMVRMLD+ISDYL LRGWGFQRLDGSI+G+LRKQA+DHFNA+GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQ +QVSVYR V + S+EEKIIE A RKMVLDHLVIQRMDSA ++ A++ SK + L EIL++GA LFN+++E E E++I DIL RAET + D E+H PAN LLS+FKVV + +D D ++ G K W +I+P + R ++K EE QK L+ELELGPR+RK+VKA+Q G S+ + S E+D K +L++KEI+++++ +K+F RPLERI +I +AE+ D TEKE+ +V+ ++ GC + + ++ NK VF ++ I+ K +LQSL+ L+ LHQ LP+ KE R+ F LPF KL WSC W+ DD RLL GV+E G DNWEAIK+D DL L SK+LP SASERPQASH+R+RV+YLL+ L Sbjct: 58 RELRDEFEDYPELYGIRRSGRCRKEPFRFKPSDAAAARIRRKKQRDSDGDSDGEGQTSDDSSD----SQWNGKTKRPNRSVRTRGNRVNYKNAFLDDSSDEYEAEGYDRRPAT--NNRTLQSSTQNRTDFDGKQSAGSPQLSDEELADTPYQDADWGE--AEEADVIEEVLTHAVRRKGALGNPTTLYNTKLEKDLNADFDPSSEPGELQFLIKWRNWSHIHSTWETEASLKSPDRGCPVYGFKKLAAYQASLKEKEE-NMRFAEREDLETMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGKV-VRSLYLPAVESYEARCRSTELPNSKCEVLHTRPKFAPLTEQPDYLGDSTDLKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLCCLFHEYKLYGPFLIVVPLSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGGSRRQQVLKFNVCITTYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMKELWALLHFSMPERFPVWEEFEGSYSVAEDDPATRVDGEAFHHLHKVLRPFLLRRVKKDVESSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRGHKASFINIVMELKKCCNHAHLIAPPQENDRRLWTNDEYLWSLIRGSGKMTLLDKLLQRLKPKGHRVLIFSQMVRMLDLISDYLTLRGWGFQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLVIQRMDSAGGSRSAASRKGETSKGQLLTEILRYGAEGLFNRNDEDFAELEVDIDDILNRAETRDTDATAEAH-PANALLSSFKVVTLDTVDDDMDSNHLLAVGPEKSWDEIIPSEFRGQLKAEEIQKTLVELELGPRRRKQVKAFQAGMDYSSDDSSEEQDGKAAPTQLSEKEIRALVRAIKRFARPLERIDAIAADAELPDRTEKELLEVVDAVLKGCQSAMEIANQAVNDEAQKPPNKGPVFQYGRVSIAAKPLLQSLEYLETLHQCLPEGGKEARMNFELPFVPKLVTWSCPWDASDDVRLLAGVYEHGYDNWEAIKLDADLGLGSKLLPMSASERPQASHIRSRVDYLLRML 1251 HSP 2 Score: 65.855 bits (159), Expect = 1.109e-6 Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 3980 EHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E F +M+GPLF KC +++ PIK K LE ++ + D KQ S +L IG++I +++ + + K W+ Y W FV F E H IYK A K+ + Sbjct: 1396 EEEFRKMRGPLFLKCKEKLLPIKKHFKHLEHLE----DSPEEDAKQFSKVVLRIGDYIHNLVREITDKKNKHLWKGYFWEFVQIFSKKSTDELRH-IYKHAAKRRQ 1496
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Match: A0A4S2LXI3 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005288 PE=4 SV=1) HSP 1 Score: 1172.92 bits (3033), Expect = 0.000e+0 Identity = 626/1227 (51.02%), Postives = 813/1227 (66.26%), Query Frame = 2 Query: 161 RSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPL-ILIR---------------------GEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQN---FDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXX---LYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDE-LNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHD--DESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSEC------DTEEKKNKA-VFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 R L DE ++ P+LY RRS R RKEP RF ++ R ++ G + E ++ S+ N K + + + V+YK D + G ++ T KP L+R + D E + Y D E +EE +VIEEVL + G G T+ YN L+ + + D +S+ E Q+LIKWR WSHIHSTWE+E ++++ G KKL ++ K +E A EDL+ +EEERNE +L KM+ ERI+ R+ +++ DYLIKW LDYR+ +WESG + V++L+ + +E R RS ++PN KCE L RPKFAP+ EQPDYL ++D+KLRDYQL+G+NW+ AW R NSVILADEMGLGKTIQTIGFL LF+++ ++GPFL+VVPLST+SSWQ E +WAP MN +IYTGD VSRQ+IRE EW ++++LKF+VCITTYE+LLKDK WL ++SWAFLGVDEAHRLKND SQLY L TFDTNTRLLITGTP+ N+++ELWALLHF MP++F W +FE Y+++ ++ L+KVL PFLLRR KKDVE SLP K E+I+RV M ++Q +Y+LIL +NY+ L K TRGH +SF+NIVMELKKCCNH L+ P E D +L I+ SGKM LLDKL+ LK KGHRVLIFSQMVRMLD+ISDYL LRGWGFQRLDGSI+G+LRKQA+DHFNA+GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQ +QVSVYR V + S+EEKIIE A RKMVLDHLVIQRMDSA ++ A++ SK + L EIL++GA LFN+++E E E++I DIL RAET + D E+H PAN LLS+FKVV + +D D ++ G K W +I+P + R ++K EE QK L+ELELGPR+RK+VKA+Q G S+ + S E+D K +L++KEI+++++ +K+F RPLERI +I +AE+ D TEKE+ +V+ ++ GC + + ++ NK VF ++ I+ K +LQSL+ L+ LHQ LP+ KE R+ F LPF KL WSC W+ DD RLL GV+E G DNWEAIK+D DL L SK+LP SASERPQASH+R+RV+YLL+ L Sbjct: 58 RELRDEFEDYPELYGIRRSGRCRKEPFRFKPSDAAAARIRRKKQRDSDGDSDGEGQTSDDSSD----SQWNGKTKRPNRSVRTRGNRVNYKNAFLDDSSDEYEAEGYDRRPATNNRTLQSSTQNSQQTTFQKPKGPLVRKLCSSRLAARTDFDGKQSAGSPQLSDEELADTPYQDADWGE--AEEADVIEEVLTHAVRRKGALGNPTTLYNTKLEKDLNADFDPSSEPGELQFLIKWRNWSHIHSTWETEASLKSPDRGCPVYGFKKLAAYQASLKEKEE-NMRFAEREDLETMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGKV-VRSLYLPAVESYEARCRSTELPNSKCEVLHTRPKFAPLTEQPDYLGDSTDLKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLCCLFHEYKLYGPFLIVVPLSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGGSRRQQVLKFNVCITTYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMKELWALLHFSMPERFPVWEEFEGSYSVAEDDPATRVDGEAFHHLHKVLRPFLLRRVKKDVESSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRGHKASFINIVMELKKCCNHAHLIAPPQENDRRLWTNDEYLWSLIRGSGKMTLLDKLLQRLKPKGHRVLIFSQMVRMLDLISDYLTLRGWGFQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLVIQRMDSAGGSRSAASRKGETSKGQLLTEILRYGAEGLFNRNDEDFAELEVDIDDILNRAETRDTDATAEAH-PANALLSSFKVVTLDTVDDDMDSNHLLAVGPEKSWDEIIPSEFRGQLKAEEIQKTLVELELGPRRRKQVKAFQAGMDYSSDDSSEEQDGKAAPTQLSEKEIRALVRAIKRFARPLERIDAIAADAELPDRTEKELLEVVDAVLKGCQSAMEIANQAVNDEAQKPPNKGPVFQYGRVSIAAKPLLQSLEYLETLHQCLPEGGKEARMNFELPFVPKLVTWSCPWDASDDVRLLAGVYEHGYDNWEAIKLDADLGLGSKLLPMSASERPQASHIRSRVDYLLRML 1275 HSP 2 Score: 65.855 bits (159), Expect = 1.179e-6 Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 3980 EHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E F +M+GPLF KC +++ PIK K LE ++ + D KQ S +L IG++I +++ + + K W+ Y W FV F E H IYK A K+ + Sbjct: 1420 EEEFRKMRGPLFLKCKEKLLPIKKHFKHLEHLE----DSPEEDAKQFSKVVLRIGDYIHNLVREITDKKNKHLWKGYFWEFVQIFSKKSTDELRH-IYKHAAKRRQ 1520
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Match: A0A4S2LYW4 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005288 PE=4 SV=1) HSP 1 Score: 1171.38 bits (3029), Expect = 0.000e+0 Identity = 627/1227 (51.10%), Postives = 815/1227 (66.42%), Query Frame = 2 Query: 161 RSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPL-ILIR--------------GEKI-------DNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQN---FDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXX---LYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDE-LNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHD--DESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSEC------DTEEKKNKA-VFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 R L DE ++ P+LY RRS R RKEP RF ++ R ++ G + E ++ S+ N K + + + V+YK D + G ++ T KP L+R G++ D E + Y D E +EE +VIEEVL + G G T+ YN L+ + + D +S+ E Q+LIKWR WSHIHSTWE+E ++++ G KKL ++ K +E A EDL+ +EEERNE +L KM+ ERI+ R+ +++ DYLIKW LDYR+ +WESG + V++L+ + +E R RS ++PN KCE L RPKFAP+ EQPDYL ++D+KLRDYQL+G+NW+ AW R NSVILADEMGLGKTIQTIGFL LF+++ ++GPFL+VVPLST+SSWQ E +WAP MN +IYTGD VSRQ+IRE EW ++++LKF+VCITTYE+LLKDK WL ++SWAFLGVDEAHRLKND SQLY L TFDTNTRLLITGTP+ N+++ELWALLHF MP++F W +FE Y+++ ++ L+KVL PFLLRR KKDVE SLP K E+I+RV M ++Q +Y+LIL +NY+ L K TRGH +SF+NIVMELKKCCNH L+ P E D +L I+ SGKM LLDKL+ LK KGHRVLIFSQMVRMLD+ISDYL LRGWGFQRLDGSI+G+LRKQA+DHFNA+GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA ARAHRIGQ +QVSVYR V + S+EEKIIE A RKMVLDHLVIQRMDSA ++ A++ SK + L EIL++GA LFN+++E E E++I DIL RAET + D E+H PAN LLS+FKVV + +D D ++ G K W +I+P + R ++K EE QK L+ELELGPR+RK+VKA+Q G S+ + S E+D K +L++KEI+++++ +K+F RPLERI +I +AE+ D TEKE+ +V+ ++ GC + + ++ NK VF ++ I+ K +LQSL+ L+ LHQ LP+ KE R+ F LPF KL WSC W+ DD RLL GV+E G DNWEAIK+D DL L SK+LP SASERPQASH+R+RV+YLL+ L Sbjct: 58 RELRDEFEDYPELYGIRRSGRCRKEPFRFKPSDAAAARIRRKKQRDSDGDSDGEGQTSDDSSD----SQWNGKTKRPNRSVRTRGNRVNYKNAFLDDSSDEYEAEGYDRRPATNNRTLQSSTQNSQQTTFQKPKGPLVRKLCSSRLAARTDFDGKQSAGSPQLSDEELADTPYQDADWGE--AEEADVIEEVLTHAVRRKGALGNPTTLYNTKLEKDLNADFDPSSEPGELQFLIKWRNWSHIHSTWETEASLKSPDRGCPVYGFKKLAAYQASLKEKEE-NMRFAEREDLETMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGKV-VRSLYLPAVESYEARCRSTELPNSKCEVLHTRPKFAPLTEQPDYLGDSTDLKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLCCLFHEYKLYGPFLIVVPLSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGGSRRQQVLKFNVCITTYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMKELWALLHFSMPERFPVWEEFEGSYSVAEDDPATRVDGEAFHHLHKVLRPFLLRRVKKDVESSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRGHKASFINIVMELKKCCNHAHLIAPPQENDRRLWTNDEYLWSLIRGSGKMTLLDKLLQRLKPKGHRVLIFSQMVRMLDLISDYLTLRGWGFQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLVIQRMDSAGGSRSAASRKGETSKGQLLTEILRYGAEGLFNRNDEDFAELEVDIDDILNRAETRDTDATAEAH-PANALLSSFKVVTLDTVDDDMDSNHLLAVGPEKSWDEIIPSEFRGQLKAEEIQKTLVELELGPRRRKQVKAFQAGMDYSSDDSSEEQDGKAAPTQLSEKEIRALVRAIKRFARPLERIDAIAADAELPDRTEKELLEVVDAVLKGCQSAMEIANQAVNDEAQKPPNKGPVFQYGRVSIAAKPLLQSLEYLETLHQCLPEGGKEARMNFELPFVPKLVTWSCPWDASDDVRLLAGVYEHGYDNWEAIKLDADLGLGSKLLPMSASERPQASHIRSRVDYLLRML 1275
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:103032281]) HSP 1 Score: 952.199 bits (2460), Expect = 0.000e+0 Identity = 561/1254 (44.74%), Postives = 769/1254 (61.32%), Query Frame = 2 Query: 155 RQRSLLDEIK----ENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKK--------KVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +++ L E+K E+PD+Y RRS R+R EP+R NI G++G+ S G + + ++ S K+ NQ QK K+ S +E D+ DD PK+ KV+ + N F D+ LI E EG+ + Q ++ IE+V++ R G G TG T+ Y K + + D DE E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ W + ASPEDL+ ++E L +Q ER+I + K+ S+ +YL KW L Y TWE G +I K F + + F R+ S +P+++C+ L +RP+F +++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E P L+ ++ SGK++LLDKL+ LKE+G+RVL+FSQMVRMLDI++DYL ++ + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA +LF + E + E + I +IL+ AE T D+ + ++LLS FKV N T DE+ + +GK + W DI+P+D R +++EEE QK + ++ + PR R K Q +S + N+ +G TD EI+ IK KKF PLER+++I ++E++D + ++ + + + N C E + + K+N I + ++ K+I+Q ++ + LH+ +P N ER KF L K+ ++ W+ DD +LL+G++E G NW+ +K D DLKL+ KIL +++PQA L+ R +YLLK L+ Sbjct: 89 KKKESLAEVKKMWEEHPDVYGVRRSNRSRTEPARLNI----GAEGSSDS----EGESPKRKAPQQKKKQPQTKSSAAKQ-NQSQKGRKTKKQETSEEEDDDDDD---DDDEDTPKRQTRRRAATKVSYKEDQNDFETDSDD--------LI-------EMAEGAEEAQ------DDDSETIEKVMDTRTGKKGATGAATTLYAVEEKGDPGADFDLEKDEGETQFLIKWKGWSYIHNTWESIDSL-TQQKVKGMKKLENFKKKNDELNAWLRR-ASPEDLEYYNCQQELTTDLNKQFQIVERVIATKTGKSQVPSDFPSHKTTSNEPEYLCKWMGLPYAECTWEDGALISKK-FQSCVDSFNSRNSSKTVPSKECKVLKQRPRFVALKKQPSYIG-GENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFCTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQSKRIKFNALLTTYEILLKDKSVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPEDGDGET---PLERLQILVRGSGKLVLLDKLLTRLKERGNRVLVFSQMVRMLDILADYLTIKHYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNGSGNSNSNPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFT---MDENTPEL--EGKTVRDWDDIIPEDQRRRVEEEEKQKEMEDIYMLPRSRSSNKKLQANDSDSDVGSKLKLKNRSSGSDSETDDSDDDKKPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNTCVTAIQEHEEQMKENPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPPNPAERNKFQLTCRLKVPHFDVDWDIHDDTQLLLGIYEHGYGNWDLLKTDADLKLSEKILLDDPNKKPQAKQLQMRADYLLKMLK 1291 HSP 2 Score: 58.151 bits (139), Expect = 1.002e-7 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ + G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F LH++YK A KK Sbjct: 1424 ELDQETFSICKERMRPVKKALKQLD--KPDEGLSVQEQLQHTRACLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1519
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:103032281]) HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0 Identity = 563/1273 (44.23%), Postives = 772/1273 (60.64%), Query Frame = 2 Query: 155 RQRSLLDEIK----ENPDLYTTRRSERNRKEPSRFNILSERG---------------SQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNK----KYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKK--------KVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 +++ L E+K E+PD+Y RRS R+R EP+R NI +E G QG+R+ R + S +++ + K K NQ QK K+ S +E D+ DD PK+ KV+ + N F D+ LI E EG+ + Q ++ IE+V++ R G G TG T+ Y K + + D DE E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ W + ASPEDL+ ++E L +Q ER+I + K+ S+ +YL KW L Y TWE G +I K F + + F R+ S +P+++C+ L +RP+F +++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E P L+ ++ SGK++LLDKL+ LKE+G+RVL+FSQMVRMLDI++DYL ++ + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA +LF + E + E + I +IL+ AE T D+ + ++LLS FKV N T DE+ + +GK + W DI+P+D R +++EEE QK + ++ + PR R K Q +S + N+ +G TD EI+ IK KKF PLER+++I ++E++D + ++ + + + N C E + + K+N I + ++ K+I+Q ++ + LH+ +P N ER K+ L K+ ++ W+ DD +LL+G++E G NW+ +K D DLKL+ KIL +++PQA L+ R +YLLK L+ Sbjct: 92 KKKESLAEVKKMWEEHPDVYGVRRSNRSRTEPARLNIGAEVGCLLIGVLMNRYTVLKGQGSRM-RDVLSSVVLQKHACFCLCVCACCIRPQTKSSAAKQNQSQKGRKTKKQETSEEEDDDDDD---DDDEDTPKRQTRRRAATKVSYKEDQNDFETDSDD------LI---------EMAEGAEEAQ------DDDSETIEKVMDTRTGKKGATGAATTLYAVEEKGDPGADFDLEKDEGETQFLIKWKGWSYIHNTWESIDSL-TQQKVKGMKKLENFKKKNDELNAWLR-RASPEDLEYYNCQQELTTDLNKQFQIVERVIATKTGKSQVPSDFPSHKTTSNEPEYLCKWMGLPYAECTWEDGALISKK-FQSCVDSFNSRNSSKTVPSKECKVLKQRPRFVALKKQPSYIG-GENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFCTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQSKRIKFNALLTTYEILLKDKSVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPEDGDGET---PLERLQILVRGSGKLVLLDKLLTRLKERGNRVLVFSQMVRMLDILADYLTIKHYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNGSGNSNSNPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFT---MDENTPEL--EGKTVRDWDDIIPEDQRRRVEEEEKQKEMEDIYMLPRSRSSNKKLQANDSDSDVGSKLKLKNRSSGSDSETDDSDDDKKPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNTCVTAIQEHEEQMKENPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPPNPAERNKY-LTCRLKVPHFDVDWDIHDDTQLLLGIYEHGYGNWDLLKTDADLKLSEKILLDDPNKKPQAKQLQMRADYLLKMLK 1320 HSP 2 Score: 57.7658 bits (138), Expect = 1.150e-7 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ + G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F LH++YK A KK Sbjct: 1454 ELDQETFSICKERMRPVKKALKQLD--KPDEGLSVQEQLQHTRACLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1549
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:103032281]) HSP 1 Score: 943.34 bits (2437), Expect = 0.000e+0 Identity = 519/1096 (47.35%), Postives = 704/1096 (64.23%), Query Frame = 2 Query: 593 ECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 E EG+ + Q ++ IE+V++ R G G TG T+ Y K + + D DE E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ W + ASPEDL+ ++E L +Q ER+I + K+ S+ +YL KW L Y TWE G +I K F + + F R+ S +P+++C+ L +RP+F +++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E P L+ ++ SGK++LLDKL+ LKE+G+RVL+FSQMVRMLDI++DYL ++ + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA +LF + E + E + I +IL+ AE T D+ + ++LLS FKV N T DE+ + +GK + W DI+P+D R +++EEE QK + ++ + PR R K Q +S + N+ +G TD EI+ IK KKF PLER+++I ++E++D + ++ + + + N C E + + K+N I + ++ K+I+Q ++ + LH+ +P N ER KF L K+ ++ W+ DD +LL+G++E G NW+ +K D DLKL+ KIL +++PQA L+ R +YLLK L+ Sbjct: 260 EMAEGAEEAQ------DDDSETIEKVMDTRTGKKGATGAATTLYAVEEKGDPGADFDLEKDEGETQFLIKWKGWSYIHNTWESIDSL-TQQKVKGMKKLENFKKKNDELNAWLRR-ASPEDLEYYNCQQELTTDLNKQFQIVERVIATKTGKSQVPSDFPSHKTTSNEPEYLCKWMGLPYAECTWEDGALISKK-FQSCVDSFNSRNSSKTVPSKECKVLKQRPRFVALKKQPSYIG-GENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFCTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQSKRIKFNALLTTYEILLKDKSVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPEDGDGET---PLERLQILVRGSGKLVLLDKLLTRLKERGNRVLVFSQMVRMLDILADYLTIKHYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNGSGNSNSNPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFT---MDENTPEL--EGKTVRDWDDIIPEDQRRRVEEEEKQKEMEDIYMLPRSRSSNKKLQANDSDSDVGSKLKLKNRSSGSDSETDDSDDDKKPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNTCVTAIQEHEEQMKENPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPPNPAERNKFQLTCRLKVPHFDVDWDIHDDTQLLLGIYEHGYGNWDLLKTDADLKLSEKILLDDPNKKPQAKQLQMRADYLLKMLK 1331 HSP 2 Score: 57.7658 bits (138), Expect = 1.192e-7 Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F LH++YK A KK Sbjct: 1464 ELDQETFSICKERMRPVKKALKQLDKPD--EGLSVQEQLQHTRACLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1559
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:103032281]) HSP 1 Score: 942.954 bits (2436), Expect = 0.000e+0 Identity = 519/1096 (47.35%), Postives = 704/1096 (64.23%), Query Frame = 2 Query: 593 ECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKN------------SDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKP-KLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGK---------------------------LTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 E EG+ + Q ++ IE+V++ R G G TG T+ Y K + + D DE E Q+LIKW+ WS+IH+TWES ++ T Q GMKKL FK+ W + ASPEDL+ ++E L +Q ER+I + K+ S+ +YL KW L Y TWE G +I K F + + F R+ S +P+++C+ L +RP+F +++QP Y+ +++LRDYQLDGVNWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K +KF+ +TTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY LI F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF +W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E P L+ ++ SGK++LLDKL+ LKE+G+RVL+FSQMVRMLDI++DYL ++ + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE+IIE AK+KMVLDHLVIQRMD+ L + + + PF+K+EL ILKFGA +LF + E + E + I +IL+ AE T D+ + ++LLS FKV N T DE+ + +GK + W DI+P+D R +++EEE QK + ++ + PR R K Q +S + N+ +G TD EI+ IK KKF PLER+++I ++E++D + ++ + + + N C E + + K+N I + ++ K+I+Q ++ + LH+ +P N ER KF L K+ ++ W+ DD +LL+G++E G NW+ +K D DLKL+ KIL +++PQA L+ R +YLLK L+ Sbjct: 260 EMAEGAEEAQ------DDDSETIEKVMDTRTGKKGATGAATTLYAVEEKGDPGADFDLEKDEGETQFLIKWKGWSYIHNTWESIDSL-TQQKVKGMKKLENFKKKNDELNAWLRR-ASPEDLEYYNCQQELTTDLNKQFQIVERVIATKTGKSQVPSDFPSHKTTSNEPEYLCKWMGLPYAECTWEDGALISKK-FQSCVDSFNSRNSSKTVPSKECKVLKQRPRFVALKKQPSYIG-GENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFCTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQSKRIKFNALLTTYEILLKDKSVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFESWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPEDGDGET---PLERLQILVRGSGKLVLLDKLLTRLKERGNRVLVFSQMVRMLDILADYLTIKHYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNGSGNSNSNPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFT---MDENTPEL--EGKTVRDWDDIIPEDQRRRVEEEEKQKEMEDIYMLPRSRSSNKKLQANDSDSDVGSKLKLKNRSSGSDSETDDSDDDKKPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNTCVTAIQEHEEQMKENPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPPNPAERNKFQLTCRLKVPHFDVDWDIHDDTQLLLGIYEHGYGNWDLLKTDADLKLSEKILLDDPNKKPQAKQLQMRADYLLKMLK 1331 HSP 2 Score: 57.7658 bits (138), Expect = 1.104e-7 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ + G ++ + CLL IG+ I + ++ + E + WR LW FV+ F + F LH++YK A KK Sbjct: 1464 ELDQETFSICKERMRPVKKALKQLD--KPDEGLSVQEQLQHTRACLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1559
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Match: chd1 (chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]) HSP 1 Score: 925.62 bits (2391), Expect = 0.000e+0 Identity = 518/1065 (48.64%), Postives = 692/1065 (64.98%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAAD--LFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDN---------------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSE--CDTEE-------KKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 +E +E V+ RIG G TG T+ Y + N +++ + QYLIKW+ WSHIH+TWE+E T++ QN GMKKL FK+ ++ ++ W K ASPED++ ++E + L Q ERII K++ DYL KW+ L Y +WE G +I + F I + R++S IP R C+ L +RP+F P+++QP Y+ ++LRDYQLD +NW+AH+W +GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E ++WAP MN+++Y GD SR +IR EW + K LKF++ +TTYE+LLKDK +L +SWAF+GVDEAHRLKND+S LY +I F +N RLLITGTP+ NSL+ELW+LLHFIMP+KF++W FED + + + + L+K LEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+ALSK T+G TS FLNI+MELKKCCNH L+ +P D + NK + HL I+SSGK++LLDKL+ LKE+GHRVLIFSQMVRMLDI+++YL R + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQKRQV++YR V K S+EE IIE AK+KMVLDHLVIQRMD+ LH + + PF+K+EL+ ILKF QE++I +IL+RAET +D +LLS FKV N T E+E + + G + W DI+P++ R +++EEE QK L E+ L PR R K Q++ E N +E +D EI+ IK KKF PLER+ +I +AE++D +E ++ + + + NGC E C E+ K F I + ++ K ++ ++L LH+ +P + EER ++ LP K A++ W EDD+ LL+G++E G +WE IKMD DL LT K+LP ++PQA L+TR +YL+K L Sbjct: 148 DEFETLERVMGIRIGRKGATGATTTVYAVEADGDPNANFNSSKQPGDVQYLIKWKGWSHIHNTWETEETLK-LQNVKGMKKLDNFKKKEQDKKKWLKS-ASPEDVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALISRK-FQKCIDCYMSRNQSKTIPFRDCKVLKQRPRFMPMKKQPHYIG-GDGLELRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHSQTKRLKFNILLTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEDEHGM-----GRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAMQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKSPDDHDFYNKAEALQHL---IRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFDRCSYVFLMSLLCTVILQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFTMMEEEE--IDMDADGNQRNWDDIIPEEQRRRMEEEERQKELAEIYLLPRMRNCAK-----QISFNGNEGRRSRNRRYSGSDSDSASDRKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEHDLRRLAETVHNGCVKTLRENPCGPEKTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKRYTLPCHAKAAHFDIDWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLL 1193
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004254.1 (pep scaffold:Pmarinus_7.0:GL484668:1435:12215:1 gene:ENSPMAG00000003871.1 transcript:ENSPMAT00000004254.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0 Identity = 334/533 (62.66%), Postives = 408/533 (76.55%), Query Frame = 2 Query: 1337 RGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMD----SALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX--IQDILQRAETTNHDDESHNPAN-DLLSAFKV 2914 RGNSVILADEMGLGKTIQTI FLSY+F+ H ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD SR VIRE EW + K LKF+ +TTYE+LLKDK L ++WAFLGVDEAHRLKND+S LY LI F TN RLLITGTP+ NSL+ELW+LLHFIMPDKF+ W DF+ + + L+K LEPFLLRR KKDVE+SLP+K EQI+RV M +Q YK ILT+N++ALSK TRG TS FLNI+MELKKCCNH L+ ++E +K D L+ ++SSGK++LLDKL+ L+E GHRVLIFSQMVRMLDI++DYL ++ + FQRLDGSIK RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V + ++EE IIE AK+KMVLDHLVIQRMD + L + + + + PF+K+EL ILKFGA +LF + E ++E + I +IL+RAET +DD A +LLS FKV Sbjct: 2 RGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREYEWIHQQTKKLKFNALVTTYEILLKDKTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDKFSAWEDFDAVHG-----SGSDNGYVSLHKELEPFLLRRVKKDVERSLPAKVEQILRVEMTPQQKHYYKWILTRNFKALSKGTRGSTSGFLNIMMELKKCCNHCYLIKLPEDENVDKHDA---LQSLVRSSGKLILLDKLLCRLRETGHRVLIFSQMVRMLDILADYLAMKHFPFQRLDGSIKNEQRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLQKGSAPSSSTPFNKEELASILKFGAEELFKEGEAEEQESQQEMDIDEILRRAETRENDDSLLPTAGEELLSQFKV 526
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]) HSP 1 Score: 430.639 bits (1106), Expect = 1.574e-134 Identity = 229/518 (44.21%), Postives = 333/518 (64.29%), Query Frame = 2 Query: 1247 EQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGD-----AVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 E P Y+ + +RDYQ+ G+NWL + G + ILADEMGLGKT+QTI L Y+ + I GP +++VP ST+ +W EF W P + + GD + S+ ++ EW VC+T+YE+++++K K +W +L +DEAHR+KN++S+L + F T RLL+TGTP+ N+L ELW+LL+F++PD FN+ F ++ +N +++V L+ VL PFLLRR K DVEKSLP K E I + + + Q E Y IL K+ + L+ + LNI+M+L+KCCNH L + E D+H+ + +SGKM++LDKL+ +L E+G RVLIFSQM RM+DI+ DY + RG+ + RLDG R+ +I FNA S+ F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQK+ V V+RF+ ++++E++I+E A+ K+ LD +VIQ+ L + ANK KDE+ +++++GA +F Sbjct: 102 ESPSYVKCGT---MRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMAEFERWVPSLRAVCLIGDKDHRVSASQPIVPPIEW----------DVCVTSYEMIIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADTFTSWFD-TNNCFGDQQLVERLHMVLRPFLLRRIKADVEKSLPPKKECKIYIGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFD--GAEPGPPYTTDTHI---VINSGKMVVLDKLLPKLHEQGSRVLIFSQMTRMMDILEDYCMWRGYEYCRLDGQTPHEDRQVSIASFNAPDSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKVVRVFRFITESTVEDRIVERAEMKLRLDSIVIQQGPGRLVDQV-ANK---LGKDEMLQMIRYGATQVF 596
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]) HSP 1 Score: 433.335 bits (1113), Expect = 1.734e-131 Identity = 230/518 (44.40%), Postives = 334/518 (64.48%), Query Frame = 2 Query: 1247 EQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGD-----AVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 E P Y+ + +RDYQ+ G+NWL + G + ILADEMGLGKT+QTI L Y+ + I GP +++VP ST+ +W EF W P + + G+ A V + EW VC+T+YE+++++K K +W +L +DEAHR+KN++S+L + + F + RLL+TGTP+ N+L ELW+LL+F++PD FN+ DF+ ++ +N + E V L+ VL PFLLRR K DVEKSL K E I + + + Q E Y IL K+ + L+ + LNI+M+L+KCCNH L + E D+HL + +SGKM++LDKL+ +L+E+G RVL+FSQM RMLDI+ DY + +G+G+ RLDG R++AI +NA S+ F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ ++V V+RF+ +N++EE+I+E A+ K+ LD +VIQ++ + ANK KDE+ ++++ GA +F Sbjct: 127 ESPTYVKGGT---MRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHHRNIQGPHMVLVPKSTLHNWMNEFERWVPSLRAVCLIGNKDQRVATDENVYTKREW----------DVCVTSYEIVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSDIVREFKSTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSEDFDSWFDTNNCLGDQELVER-LHMVLRPFLLRRIKADVEKSLQPKKEVKIYIGLSKMQREWYTKILMKDIDILNSAGKMDKLRLLNILMQLRKCCNHPYLFD--GAEPGPPYTTDTHL---VNNSGKMVVLDKLLPKLQEQGSRVLLFSQMTRMLDILEDYCMWKGYGYCRLDGQTPHEDRQEAIAAYNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKRVRVFRFLTENTVEERIVERAEMKLRLDSIVIQQVCAGRLIDQQANK---LGKDEMLQMIRHGATHVF 622
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006729.1 (pep scaffold:Pmarinus_7.0:GL476370:400098:484196:-1 gene:ENSPMAG00000006035.1 transcript:ENSPMAT00000006729.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 409.068 bits (1050), Expect = 1.084e-124 Identity = 258/686 (37.61%), Postives = 392/686 (57.14%), Query Frame = 2 Query: 788 QYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEI-QKRREIWKKHHASPEDLDAAQ---FEEERNESLLQQKMECERIIDAQRNKNSDSLD----YLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWY---FPKKKMLKF---HVCITTYELLLKDKDWLNKISWAFLGVDE-AHRLKNDESQLYNFLITFDTNT-RLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKET-RGHTSSFLNIVMELKKCCNHVQLVNPLDE-------ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGA 2773 +Y +K++ +S++H W S M++L + K I QK + W K AQ F + E+ +E +RI+D + D+ + YL+KW +L Y STWE + +++ I EFE +++ C+ R P A ++ D + + +LR+YQL+GVNWL W + ILADEMGLGKTIQ+I FL + + GPFL++ PLSTI++W+ EF W MN +++ G SRQ+I++ E Y K ++ F + +TT LK L+K ++ + + E + R+ L + L + ++L+TGTP+ N++ EL++LL+F+ P +F + F + + EE V +L +L+P +LRR K+DVEK+L K E II V + Q + Y+ IL +N+ L+K + + + +N +MEL+KCCNH L+N +E E PD +L+ ++++GK++L+DKL+ L+E GH+VLIFSQMVR LDI+ DYLV + + ++R+DG ++G++R+ AID F S F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA AR HRIGQ + V VYR + +NS E ++ + A K+ LD V+Q M R+ N Q SK E+ ++L+ GA Sbjct: 87 EYYVKYKNYSYLHCEWAS------------MQQLERDKRIHQKIKRFWIKR---------AQMNIFAQLDEEAFNPDYVEVDRILDVSHCSDPDTGEPVTYYLVKWCSLPYEDSTWE----LKEDIDQTRIDEFE----ALRARKHVCKRAERPPPKA-WKKLEDSREYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQDV-ALAGVHGPFLVIAPLSTIANWEREFRTWTD-MNAVVFHGSVASRQMIQQYEMYTRDAQSKNIVGFCFYYEKVTTVHSHLKVLPELHKGLFSCIYLSEHSTRVITRRVLLMHLLELYGVEEHKVLLTGTPLQNTVEELFSLLNFLEPARFPSESSFLQEFG----QLKSEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILERNFSFLAKGAGQANLPNLMNTMMELRKCCNHPYLINGAEEKILSDFREAHGADVPDFYLQAMVQAAGKLVLIDKLLPRLREGGHKVLIFSQMVRCLDILEDYLVQKRYPYERIDGRVRGNMRQVAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDRAVLQSMSG---RENTTNGVQQMSKKEIEDLLRKGA 733
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Match: SMARCA2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:HGNC:11098]) HSP 1 Score: 371.703 bits (953), Expect = 6.237e-106 Identity = 205/484 (42.36%), Postives = 287/484 (59.30%), Query Frame = 2 Query: 1286 LRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLIT-FDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYN---------IXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYK------LILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEE-TENKMDPDSHLRY--YIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQ 2680 L+ YQ+ G+ WL + + ILADEMGLGKTIQTI ++YL + GPFL++VPLST+S+W EF+ W P + I Y G ++R+ + P+ + KF+V +TTYE ++KDK L K+ W ++ VDE HR+KN +L L T + RLL+TGTP+ N L ELWALL+F++P F + FE +N + E ++ L+KVL PFLLRR KK+VE LP K E +I+ M Q LY+ ++LT E K + +N +++L+K NH + ++E E+ P+S ++ ++SGK LLD+++ +L+ HRVL+F QM ++ I+ DY R + + RLDG+ K R + FN S F FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQ+ +V V R NS+EEKI+ AK K+ +D VIQ Sbjct: 736 LKMYQVQGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPFLIIVPLSTLSNWMMEFDKWGPSVVKISYKGSPIARRA------FMPQLRSGKFNVLLTTYEYIIKDKHVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYIAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFALTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKVLYRHMQAKGVLLTDGSEKDKKGKG-GAKTLMNTIVQLRKIANHPYMFQHIEESFAEHLGFPNSIVQGADLFRASGKFELLDRILPKLRVSNHRVLLFCQMTSLMTIMEDYFAFRSFRYLRLDGTTKSEDRSNLLKTFNEPNSPYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1212
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Match: CHD1 (Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966]) HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0 Identity = 436/1135 (38.41%), Postives = 637/1135 (56.12%), Query Frame = 2 Query: 644 EEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKF--KEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDS---LDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF-PK---KKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKF--NTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEET-----ENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAE---TTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVP-------QDLREKIKEEEHQKALLELELGPRQR---KKVKAYQVGQVNXXXXXXXXXDNKETG---------GKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEI-IDHTEK--EVYDVMKQIINGC-------------------NAVYSECDTEE--------------------KKNKAVFTIRKI-VISVKNILQSLDDLDILHQILPKN-KEERLKFVLPFETK--LANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKIL---------------------PS--------SASERPQASHLRTRVEYLLKKLR 3709 E+ + I+ V+N R+ T +E KVL EK D NN E ++LIKW + SH+H+TWE T ++ G+K+L + + I + +++ + + ED++ E ER ++ ERIID+QR D L YL+KW+ L+Y +TWE+ IVK L P + F+ R S +P ++RP+F + QP ++ +LRD+QL G+NW+A W++G++ ILADEMGLGKT+QT+ F+S+L GP ++VVPLST+ +W F WAP +N I Y G+ SR IRE E+Y P+ KK +KF+V +TTYE +LKD+ L I W F+ VDEAHRLKN ES LY L +F R+LITGTP+ N+++EL AL++F+MP +F + DFE++ + E EE + +L++ ++PF+LRR KKDVEKSLPSK+E+I+RV + QTE YK ILTKNY AL+ +G S LNI+ ELKK NH L + +E + KM ++ LR I SSGKM+LLD+L+ LK+ GHRVLIFSQMVRMLDI+ DYL ++G FQRLDG++ + R+ +IDHFN+ S DF FLLSTRAGGLGINL TADTV+IFDSDWNPQ DLQAMARAHRIGQK V VYR V K+++EE+++E A++KM+L++ +I + ++ T KN+P + EL+ ILKFGA ++F + + ++LN+ D+L AE TT ESH + L F+V T+ D D W DI+P QD +K K+EE+ K +LE+ R+ KK+K G + + +S ++ + + + E++++ K + KF E + ++ + + + EK E YD M + C A ++ + E +K +F + + ++ +++L ++DL L ++ N K++ LKF L T + NWS W E+D +LL+GVF+ G +W I+ D L +T KI PS S+ + P A HL RV+YLL LR Sbjct: 174 EDFHGIDIVINHRL----KTSLEEG---KVL--EKTVPDLNNCKEN-YEFLIKWTDESHLHNTWE---TYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIMDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVK-LAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGG---ELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQ------DEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYT--KKNEP-NAGELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLGGEEFLKQFEV---TDYKADID------------WDDIIPEEELKKLQDEEQKRKDEEYVKE--QLEMMNRRDNALKKIKNSVNGDGTAANSDSDDDSTSRSSRRRARANDMDSIGESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCVHEEEKNRKEILEKLEKHATAYRAKLKSGEIKAENQPKDNPLTRLSLKKREKKAVLFNFKGVKSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSSNWTKEEDEKLLIGVFKYGYGSWTQIRDDPFLGITDKIFLNEVHNPVAKKSASSSDTTPTPSKKGKGITGSSKKVPGAIHLGRRVDYLLSFLR 1265
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Match: ISW2 (ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; the Isw2 complex exhibits basal levels of chromatin binding throughout the genome as well as target-specific chromatin interactions; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide [Source:SGD;Acc:S000005831]) HSP 1 Score: 452.595 bits (1163), Expect = 2.208e-137 Identity = 255/544 (46.88%), Postives = 350/544 (64.34%), Query Frame = 2 Query: 1241 IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDA-----VSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKET--RGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAE 2851 + E P ++ KLRDYQ+ G+NWL S ILADEMGLGKT+QTI FL YL I GPFL++VP ST+ +W+ EF W P +N+++ GD + R +I E +F V IT+YE+++++K+ L +++W ++ +DEAHR+KN++S L + F + RLLITGTP+ N+L ELWALL+F++PD F F++ + +N ++ E V+ +L+ VL PFLLRR K DVEKSL K E + V M Q + YK +L K+ +A++ R + LNIVM+L+KCCNH L E D HL I +SGKM++LDKL+ LKEKG RVLIFSQM R+LDI+ DY R + + R+DGS R +AID +N S F FLL+TRAGGLGINL TADTVI+FDSDWNPQ DLQAM RAHRIGQK+QV VYRFV +N+IEEK+IE A +K+ LD LVIQ+ +KT + N SKD+L ++++FGA ++F + + + +I DIL++ E Sbjct: 172 VSESPSFVKSG---KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEA----------RFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGA--EPGPPYTTDEHL---IFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ---GTGKKTASLGN---SKDDLLDMIQFGAKNMF-EKKASKVTVDADIDDILKKGE 690
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Match: ISW1 (ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK [Source:SGD;Acc:S000000449]) HSP 1 Score: 429.098 bits (1102), Expect = 7.345e-129 Identity = 246/519 (47.40%), Postives = 337/519 (64.93%), Query Frame = 2 Query: 1241 IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKML--KFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEAL--SKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 RE P Y++ +LR YQ+ GVNWL + ILADEMGLGKT+QTI FL YL I GPFL++ P ST+++W E N W P +N I GD R + + KK+L F V I +YE+++++K L KI+W ++ +DEAHR+KN+ES L L F + RLLITGTP+ N+L ELWALL+F++PD F+ DF+D ++ + + +++V +L+ VL+PFLLRR K DVE SL K E + V M Q + YK IL K+ +A+ S ++ + LNI+M+L+KCCNH L + E D HL Y ++ K+ +LDKL+ +LKE+G RVLIFSQM R+LDI+ DY R + + R+DGS R QAID +NA S F FLL+TRAGGLGINL +AD V+++DSDWNPQ DLQAM RAHRIGQK+QV V+R V NS+EEKI+E A +K+ LD LVIQ+ ++L +K +N+ SKD L +++ GAAD+F Sbjct: 185 FRESPAYVNG----QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ-------KKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFD--GAEPGPPYTTDEHLVY---NAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK----ENKADSKDALLSMIQHGAADVF 683
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Match: STH1 (ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p [Source:SGD;Acc:S000001388]) HSP 1 Score: 386.726 bits (992), Expect = 3.280e-112 Identity = 218/500 (43.60%), Postives = 312/500 (62.40%), Query Frame = 2 Query: 1241 IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLIT--FDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXX-----------XXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFL----NIVMELKKCCNHVQLVNPLDEETENKMDP---DSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQ 2680 I +QP L + L++YQL G+ W+ + + ILADEMGLGKTIQ+I ++YL+ GPFL++VPLSTI++W EF WAP +N IIY G R ++ + ++ F V +TTYE ++KDK L+K WA + +DE HR+KN +S+L +F I+ + T RL++TGTP+ N+L ELWALL+F++P FN+ FED +N N +E + L+KVL PFLLRR KK+VEK LP K E++I+ + Q +LY+ +L N + T G T + N +M+L+K CNH + + E E ++P +S L + + +GK LLD+++ + K GHRVL+F QM +++DI+ D+L ++ + RLDGS K R + ++ FNA S FCFLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQK +V + R + +S+EE I+E A +K+ +D VIQ Sbjct: 458 IDKQPSILVGGT---LKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQH------QIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKL-SFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFD----EVEGVVNPSRGNSDLLFRV--AGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 941
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Match: SNF2 (Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816]) HSP 1 Score: 381.719 bits (979), Expect = 4.112e-109 Identity = 214/499 (42.89%), Postives = 306/499 (61.32%), Query Frame = 2 Query: 1241 IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLIT-FDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYN-----------IXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEAL------SKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYI-KSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQ 2680 I++QP L + L+DYQ+ G+ W+ + + ILADEMGLGKTIQTI L+YL+ I GP+L++VPLST+S+W +EF WAP + I + G R+ + K + +F V +TT+E ++K++ L+K+ W + +DE HR+KN +S+L L T + + RL++TGTP+ N+L ELWALL+F++P FN+ F++ +N I E V+ L+KVL PFLLRR KKDVEK LP K E++++ M Q +Y+ +L Y L +K+ G F N +M+LKK CNH + EE E++++P I + +GK LLD+++ +LK GHRVLIF QM +++DI+ D+L + RLDG K R + + FNA S CF+LSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQK +V + R + NS+EE I+E A +K+ +D VIQ Sbjct: 755 IKKQPSILVGGT---LKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQA------KIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLK--YRRLFIGDQNNKKMVG-LRGFNNQIMQLKKICNHPFVF----EEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQ 1237
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Match: EDO39585 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9J4]) HSP 1 Score: 506.908 bits (1304), Expect = 3.840e-160 Identity = 303/755 (40.13%), Postives = 434/755 (57.48%), Query Frame = 2 Query: 779 TERQYLIKWREWSHIHSTWESETTVQ--------TYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERN-------ESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF--------------PKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRG-HTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXX---------XXIQDILQRAETTNHDDESHNP--ANDLLSAFKVVN 2920 T R++ +KWRE S+ H +W +E ++ + + M + + I H SP A+ ++E N + + ++ RI++ + K+ S ++ +KW+ + Y STWES D + + I +ER +QP YL T KL +YQ +G+NWL +W +G + ILADEMGLGKTIQTI FL L + GPFL+ PLST+ +W+ EF WAP M ++ Y GD SR IR ++ F K +KFHV +T+YEL+ D L I WA L VDEAHRLKN++S+ + L ++ +LL+TGTP+ N+L ELW LL F+ P +FN +F ++ N E+ + +L+ +L P +LRR K DV K +PSKSE I+RV + Q + YK ILT+N+EAL+ T+G S LN++MELKKCCNH L + E + ++SGK+MLL K++ +L+E+GHRVLIFSQM RMLD++ D+L G+ ++R+DGS+ G+ R++AID FNA S FCFLLSTRAGGLGINLATADTV I+DSDWNP ND+QA +RAHRIGQ +V +YRFV ++S+EE+I + AK+KM+L HLV++ +NK SK EL++ILKFG ++LF D+ D E I +L R + D+ P AN+ L++FKV++ Sbjct: 100 TTREFFVKWREKSYWHCSWITELQIEIQHPEMFRAFSRKNDMDEPPPLSDDDDEDSIEDGQHPSPTAKSKAKEQDENNLEARFYRYGVNPEWLQINRIMNHRVLKDG-SEEFFVKWRDVPYSQSTWESPDDPINHQI--SYINCKER----------------------YEKQPAYLDETGG-KLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDFSFDEDAFKSGLKAYKLKKDSPVKFHVLLTSYELVSIDSASLQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIGYKLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNFLTEFD----NVAKEDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELSPMQKKYYKWILTRNFEALN--TKGAQQVSLLNVMMELKKCCNHPYLFHAAALEAKRTQSGGYEPNSLTEASGKLMLLVKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVVR-------PGLGSNKATIMSKSELDDILKFGTSELFKDDDTKDGESGDSVVFHYDDKAITSLLDRDQQVMEDEVKDEPMLANEYLASFKVLS 815
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Match: EDO47298 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMN4]) HSP 1 Score: 451.825 bits (1161), Expect = 1.348e-134 Identity = 262/677 (38.70%), Postives = 394/677 (58.20%), Query Frame = 2 Query: 788 QYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQ----RNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYF------PKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETR--GHTSSFLNIVMELKKCCNHVQLVNPLDE---ETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGA 2773 ++ +K++ +S++H+ W + K + KR ++ K + + + AA F E +S +E +R++D N +L+KW++L Y STWE + ++ + I +F + +P R+ ++ + P Y + LR+YQL+GVNWL W + ILADEMGLGKTIQ+I FL + ++ I GP L++ PLSTIS+WQ EF W +N ++Y G A SR +I+E E+Y+ P + KF V ITTYE+++ D L+ + W + +DEAHRLKN +L L R+L+TGTP+ N++ EL++LL+F+ P +F + F + + + E V +L ++L+P +LRR K+DVEK++ K E II V + Q + Y+ IL +N+ L+K T + + +N +MEL+KCCNH L+ +E + + D H I++SGK++L+ KL+ +LK GH+VL+FSQMVR LDI+ DYLV + ++R+DG ++G+LR+ AID F+ S F FLL TRAGGLGINL ADTVIIFDSDWNPQNDLQA AR HRIGQ R V VYR + +NS E ++ + A K+ LD V+Q M++ K +A N SK E+ ++LK GA Sbjct: 81 EFHVKFKNYSYLHAEWATAE---------------KLAKGDKRVQMKIKRYKAKQLNTAAFFSEMEEDSFNPDYVEVDRVLDMSTGMDHNTGEPITHFLVKWRSLPYEESTWE----VKADVEESKIQQFYKLREPPPLPQRQFRPRPYPHEWHKLETSPVYKDENT---LREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQSIAFL-FEMQRYGIRGPNLVIAPLSTISNWQREFESWND-INAVVYHGSASSRHLIQEYEFYYRDEHGQPIPNIFKFQVLITTYEIIIADNMQLSTVPWRAVIIDEAHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQNNVEELFSLLNFLEPSQFPSQGAFLMEFG----DLKTESQVDKLKQLLKPMMLRRLKEDVEKNIAPKEETIIEVELTTVQKKFYRAILERNFAFLAKGTSSTANVPNLMNTMMELRKCCNHPFLITGAEEKILQEYGREHVDRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRCLDILEDYLVHMKYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKAVLQSMNT----KENAGNNGQMSKREIEDLLKRGA 725
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Match: EDO40761 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S667]) HSP 1 Score: 417.542 bits (1072), Expect = 3.365e-125 Identity = 227/515 (44.08%), Postives = 327/515 (63.50%), Query Frame = 2 Query: 1247 EQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKML--KFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 E P+Y+ ++RDYQ+ G+NWL + G + ILADEMGLGKT+QTI L Y+ N + GP +++ P ST+++W EF W P + + G+ R F + ML ++ VC+T+YE+++++K K +W ++ +DEAHR+KN++S+L + + RLL+TGTP+ N+L ELWALL+F++PD F++ DF+ +N SN E +++V L+ VL PFLLRR K DVEK L K E + + + Q Y IL K+ + ++ + LNI+M+L+KCCNH L + E D HL I++SGKM +LDKL+ LK++G RVLIFSQM R+LDI+ DY + R + + RLDG R+ I+ FN GST F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQK+QV V+RF+ ++++EE+IIE A+ K+ LD +VIQ+ R D N K+E+ +++ GA +F Sbjct: 134 ESPNYIKGG---EMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICPKSTLANWMAEFERWCPSIRAVCLIGNQEQRTA-------FIRDTMLPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKLSEIVRELRSANRLLLTGTPLQNNLHELWALLNFLLPDVFSSSDDFDAWFN-SNNLVEEKQLVERLHSVLRPFLLRRLKSDVEKRLLPKKETKVYTGLTKMQRSWYTKILMKDIDVVNGAGKTDKMRLLNILMQLRKCCNHPYLFD--GAEPGPPYTTDVHL---IENSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLDILEDYCLWRQYDYCRLDGQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVIQQ-----GRLVDPNLK--VGKEEMLSMIRHGAEAVF 625
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Match: EDO46669 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPD7]) HSP 1 Score: 375.555 bits (963), Expect = 2.317e-111 Identity = 219/540 (40.56%), Postives = 306/540 (56.67%), Query Frame = 2 Query: 1286 LRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLK-FHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPD------KFNTWPDF-----EDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTK---------------------------------NY----------EALSKE------------TRGHTSSFLNIVMEL-------KKCCNHVQLVN-PLDEETEN-KMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVI 2677 LR YQL+GV WL + G + ILADEMGLGKTIQ IG +SYL + + GPFL+ PLST+ +W +EF ++P + +I+Y G R +R K + V +T+YE+ + D+ L ++ W + VDE HR+KN +L L ++++ RLL+TGTP+ N+L ELW+LL+F++PD F W DF E + +V+ L+ +L PFLLRR K DVE SLP K E ++R P+ KQTE Y+ L K NY E L++E T SS +I +++ +KCCNH L+ PLD T+ K+D + ++ SGKM+LLD+++ LK +GH++LIFSQM +MLDI+ DY LRG+ + RLDGS+K R++ ID F A F FLLSTRAGGLG+NL+ ADTVII+DSDWNPQ+DLQA R HRIGQ + + VYR V N++++KI+E A K L+ +VI Sbjct: 298 LRSYQLEGVEWLKGLYENGVNGILADEMGLGKTIQCIGLVSYLI-EMGVRGPFLVAAPLSTLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKAGPFETMPVVVTSYEIAMNDQKHLFQLMWKHMIVDEGHRIKNLNCRLIRELKSYNSANRLLLTGTPLQNNLAELWSLLNFLLPDIFDDLNSFQRWFDFSAINDEGGNEKIIAQEKEHQVLERLHSILTPFLLRRLKTDVELSLPPKKEVLVRAPLTSKQTEFYRAALDKTILDIVGDNKDKKEDKVEISSTGRKKRKGRRNINYKIFDDENGSIEELAEELATLEKSRREICTPSQKSSTYDISIKITNILMLLRKCCNHPYLLEYPLDPVTQQYKIDEE-----LVRCSGKMLLLDQMVPALKRRGHKILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAF-ASDPEKFIFLLSTRAGGLGLNLSAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPILVYRLVTSNTVDQKIVERAASKRKLEKMVI 830
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Match: EDO48116 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK66]) HSP 1 Score: 374.785 bits (961), Expect = 6.922e-107 Identity = 213/508 (41.93%), Postives = 297/508 (58.46%), Query Frame = 2 Query: 1241 IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQ----VIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLIT-FDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYN---------IXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELY-----KLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYY---------IKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQ 2680 I EQP L +L++YQL G+ W+ + ILADEMGLGKTIQTI SYL + + GPFL++VPLST+S+WQ EF WAP ++ Y G R+ V+R KF+V +TTYE +++DK L K+ W ++ VDE HR+KN +L L T + R+L+TGTP+ N L ELWALL+F++P F + FE +N + E ++ L+KVL PFLLRR KK+VE LP K E +++ M Q LY K +L + K+ +G T + +N +M+L+K CNH + ++E HL ++ ++SGK LLD+++ +LK HRVL+F QM ++ I+ DY +G+ + RLDG+ K R Q + FNA+ S F FLLSTRAGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQ+++V V R + NS+EEKI+ A+ K+ +D VIQ Sbjct: 634 ITEQPSMLVGG---RLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRSAGAVLRTG----------KFNVVLTTYEYVMRDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQNRLPELWALLNFLLPTIFKSVSTFEQWFNAPFAMTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVVKCDMSILQRILYNHMYKKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESIAE------HLGFHGGIVTGPDIYRASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLLSLFNAKDSPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQ 1122
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:101160654]) HSP 1 Score: 937.176 bits (2421), Expect = 0.000e+0 Identity = 510/1074 (47.49%), Postives = 687/1074 (63.97%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNK--------------NSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANK----NQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXX-------------------------XXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE++L+ RIG G G T+ Y + D +E E QYLIKW+ WS+IHSTWES ++ T Q G+KK+ FK+ + W + A PED++ ++E L +Q ER+I + K +SD +YL KW L Y +WE G +++K F I F R+ S +P++ C+ L +RP+F +++QP Y+ +++LRDYQLDG+NWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K ++F+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY L+ F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF++W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E + D L+ ++ SGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI++ YL + + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE IIE AK+KMVLDHLVIQRMD+ D+N + PF+K+EL ILKFGA DLF + E + E + I +IL+ AE T D+ + ++LLS FKV N + E+ + + + W DI+P++ R K +EEE Q+ + ++ + PR R K Q +S K TD EI+ IK KKF PLER+++I ++E++D + ++ + + I + C + E + K+N I + ++ K+I+Q ++ + LH+ +P N +R KF L K+A++ W+ +DD +LL+G++E G NWE IK D DLKLT KILP S++PQA L+ R EYLLK L+ Sbjct: 283 TIEKILDTRIGKKGAIGAATTVYAVEENGDPAEGFDPEKEEGETQYLIKWKGWSYIHSTWESMDSL-TQQKVKGLKKMDNFKKKSEEMNAWLRR-ACPEDIEFHNCQQELMADLNKQFQIVERVIATKTGKTAGTSDFPSHSHKTSSDEPEYLCKWMGLPYSECSWEDGALVMKK-FQRCIDSFTSRNSSKTVPSKDCKVLKQRPRFVALKKQPTYIG-DENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAPDMNVVVYIGDVMSRKTIRDYEWVNHQTKRIRFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHCFLIKQPEDGDGEVQQDV---LQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAKYLTKKRFPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFSSM---EETTHEFEERPVREWDDIIPEEQRRKAEEEEKQREMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKNRSSGSDSETDDSDDDKKPKKRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHSSCVSAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPNDRDKFKLTCRAKVAHFDVDWDLQDDTQLLLGIYEHGFGNWELIKTDPDLKLTEKILPDDPSKKPQAKQLQARAEYLLKLLK 1340 HSP 2 Score: 55.8398 bits (133), Expect = 5.086e-7 Identity = 36/108 (33.33%), Postives = 53/108 (49.07%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSD---------CLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ D+ LSD CLL IG+ I + ++++ E + WR LW FV+ F + F LH++YK A KK Sbjct: 1473 ELDQETFSVCKERMRPVKKALKQLDK-----------PDEGLSDQEQLQHTRTCLLKIGDRITECLKSYNDPEHVKLWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1568
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:101160654]) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 510/1074 (47.49%), Postives = 687/1074 (63.97%), Query Frame = 2 Query: 656 VIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNK--------------NSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLV-NPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANK----NQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXX-------------------------XXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAV-----------FTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLR 3709 IE++L+ RIG G G T+ Y + D +E E QYLIKW+ WS+IHSTWES ++ T Q G+KK+ FK+ + W + A PED++ ++E L +Q ER+I + K +SD +YL KW L Y +WE G +++K F I F R+ S +P++ C+ L +RP+F +++QP Y+ +++LRDYQLDG+NWLAH+W R NSVILADEMGLGKTIQTI FLSYLF+QH ++GPFLLVVPLST++SWQ EF WAP MN+++Y GD +SR+ IR+ EW + K ++F+ ITTYE+LLKDK L I+WAFLGVDEAHRLKND+S LY L+ F +N RLLITGTP+ NSL+ELW+LLHF+MPDKF++W DFED + + + L+KVLEPFLLRR KKDVEKSLP+K EQI+RV M +Q + YK ILT+NY+ALSK TRG +S FLNIVMELKKCCNH L+ P D + E + D L+ ++ SGK++LLDKL+ L+E+G+RVLIFSQMVRMLDI++ YL + + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQK+QV++YR V K ++EE IIE AK+KMVLDHLVIQRMD+ D+N + PF+K+EL ILKFGA DLF + E + E + I +IL+ AE T D+ + ++LLS FKV N + E+ + + + W DI+P++ R K +EEE Q+ + ++ + PR R K Q +S K TD EI+ IK KKF PLER+++I ++E++D + ++ + + I + C + E + K+N I + ++ K+I+Q ++ + LH+ +P N +R KF L K+A++ W+ +DD +LL+G++E G NWE IK D DLKLT KILP S++PQA L+ R EYLLK L+ Sbjct: 242 TIEKILDTRIGKKGAIGAATTVYAVEENGDPAEGFDPEKEEGETQYLIKWKGWSYIHSTWESMDSL-TQQKVKGLKKMDNFKKKSEEMNAWLRR-ACPEDIEFHNCQQELMADLNKQFQIVERVIATKTGKTAGTSDFPSHSHKTSSDEPEYLCKWMGLPYSECSWEDGALVMKK-FQRCIDSFTSRNSSKTVPSKDCKVLKQRPRFVALKKQPTYIG-DENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAPDMNVVVYIGDVMSRKTIRDYEWVNHQTKRIRFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHG-----KGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHCFLIKQPEDGDGEVQQDV---LQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAKYLTKKRFPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAE-TRESDQGSSATDELLSQFKVANFSSM---EETTHEFEERPVREWDDIIPEEQRRKAEEEEKQREMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKNRSSGSDSETDDSDDDKKPKKRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHSSCVSAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPNDRDKFKLTCRAKVAHFDVDWDLQDDTQLLLGIYEHGFGNWELIKTDPDLKLTEKILPDDPSKKPQAKQLQARAEYLLKLLK 1299 HSP 2 Score: 55.8398 bits (133), Expect = 5.244e-7 Identity = 36/108 (33.33%), Postives = 53/108 (49.07%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSD---------CLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKK 4291 E+ F C +RM+P+K LK L+ D+ LSD CLL IG+ I + ++++ E + WR LW FV+ F + F LH++YK A KK Sbjct: 1432 ELDQETFSVCKERMRPVKKALKQLDK-----------PDEGLSDQEQLQHTRTCLLKIGDRITECLKSYNDPEHVKLWRRNLWIFVSKFTE-FGARKLHKLYKMAQKK 1527
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Match: chd1 (chromodomain helicase DNA binding protein 1 [Source:NCBI gene;Acc:101173399]) HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0 Identity = 513/1050 (48.86%), Postives = 698/1050 (66.48%), Query Frame = 2 Query: 668 VLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSL-DYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSA----LHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXX-IQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVK--AYQVGQVNXXXXXXXXXDN--------------------KETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSE--CDTEE-------KKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 V++ RIG TG T+ Y + N + N + + QYLIKW+ W+HIH+TWE+E T++ QN GMKKL FK+ ++ ++ W K ASPED++ +EE + L Q ERII K++ DYL KW+ L Y +WE G +I K F I ++ R++S IP+R C+ L +RP+F P++ QP Y+ ++LRDYQLD +NW+AH+W++GNS ILADEMGLGKTIQTI FL+YLF++H ++GPFLLVVPLST++SWQ E +WAP MN+++Y GD SR +IR EW + LKF++ +TTYE+LLKDK +L ++WAF+GVDEAHRLKND+S LY +I F +N RLLITGTP+ NSL+ELW+LLHFIMPDKF++W FE + + + + L+K LEPFLLRR KKDVEKSLP+K EQI+RV M Q + YK ILT+NY+ALSK T+G TS FLN++MELKKCCNH L+ P D+E +K++ L+ I+SSGK++LLDKL+ LKE+GHRVLIFSQMVRMLDI++DYL R + FQRLDGSIKG +RKQA+DHFNAEGS DFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA ARAHRIGQKRQV++YR V + S+EE IIE AK+KMVLDHLVIQRMD+ L+ + + PF+K+EL+ ILKFGA +LF + E ++E + I +IL+RAET +D +LLS FKV N + +DE+I + + + W DI+P++ R +++EEE QK L E+ + PR R K ++ G+ + +E +D EI+ +K KKF PLER+ +I +AE++D +E ++ + + + NGC E C E+ K F I + ++ K ++ ++L LH+ +P + EER K+VLP +K A++ W EDD+ LL+G++E G +WE IKMD DL LT K+LP ++PQA L+TR +YL+K L Sbjct: 269 VMDSRIGRKRATGSVTTVYAVEADGDPNANFNPNKEAGDVQYLIKWKNWAHIHNTWETEETLKQ-QNVRGMKKLDNFKKKEQEQKKWLKM-ASPEDVEYFNCQEELIDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALIGKK-FQKRIDDYMCRNQSKTIPSRDCKVLKQRPRFVPMKRQPSYIG-GDGLELRDYQLDSLNWMAHSWSKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTVTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWIHLHSRRLKFNILLTTYEILLKDKTFLGNVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWEHFEADHG-----KGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMTAVQKQYYKWILTRNYKALSKGTKGSTSGFLNVMMELKKCCNHCYLIKPPDDEFLSKVEA---LQLLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTRGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLNTGAAPSSSAPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS-MMDDEEIDIDSERSQ-RSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQISFNSGERRHGRSRRYSASDSDSLSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLERLDAIARDAELVDKSELDLKRLAETVHNGCLRTLRENPCGPEKTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYVLPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLL 1304 HSP 2 Score: 66.6254 bits (161), Expect = 2.644e-10 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 3995 EMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSE 4297 E+ F C +RM+P+K+ LK L+ ++ + +++ CL+ IG+HI + + N EQ +QWR LW FV+ F + F LH++YK A KK + Sbjct: 1481 ELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE--HTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTE-FDARKLHKLYKHAIKKRQ 1578
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Match: chd3 (chromodomain-helicase-DNA-binding protein 3 [Source:NCBI gene;Acc:101167742]) HSP 1 Score: 527.324 bits (1357), Expect = 2.116e-159 Identity = 306/757 (40.42%), Postives = 438/757 (57.86%), Query Frame = 2 Query: 782 ERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNE--------------SLLQQK----------MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKM------------LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXX---------XXXIQDILQRAETTNHDDESHNPANDLLSAFKVV 2917 ER++ +K S+ H TW +E ++ + + + ++ Q++ ++ P LD EE N ++L+ K M RII+ +K YL+KW+ L Y TWE D+ + + ++ P K E EQPD+++ T L YQL+G+NWL +W +G ILADEMGLGKTIQTI FL LF + GPFL+ PLSTI +W+ EF +WAP ++ YTGD SR +IRE E+ F + +KFHV +T+YEL+ D+ L I WA L VDEAHRLKN++S+ + L + + +LL+TGTP+ N+L EL+ LL+F+ P++FN F + + + E+ + +L+ +L P +LRR K DV K++P+K+E I+RV + Q + YKLILTKN+EAL+ + G+ S LNI+M+LKKCCNH L E + K+SGK+MLL K++ +LKE+GHRVL+FSQM +MLD++ D+L G+ ++R+DG I G+LR++AID FNA G+ FCFLLSTRAGGLGINLATADTVIIFDSDWNP ND+QA +RAHRIGQ +V +YRFV + S+EE+I + AKRKM+L HLV+ R +K +K EL++ILKFG +LF + E D+ + I+ +L R++ D + N N+ LS+FKV Sbjct: 516 EREFFVKLVGQSYWHCTWITELQLEIFHS-------VMYRNYQRKTDM-----DEPPSLDYGSGGEEENSVGKSEKRRAKDPQFAILEDKYYKYGIKPEWMMIHRIINHSLDKKG-VYHYLVKWRDLTYDQCTWERDDMTIPDF-------------AIYKPTIKYE------------EQPDFVTATGGT-LHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSFDDTAVKGGKKAFKLRAPIKFHVLLTSYELVTIDQTALKSIEWACLVVDEAHRLKNNQSKFFRRLNDYKIDYKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEF----ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKLILTKNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVASMEAQKTPSGAYEGSALTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDHEGYKYERIDGGITGALRQEAIDRFNAPGACQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV--------RPGLGSKAGSMTKQELDDILKFGTEELFKDEGEGDKVEDEGNVIHYDSTAIERLLDRSQDATDDTDVQN-MNEYLSSFKVA 1220
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Match: chd4a (chromodomain-helicase-DNA-binding protein 4 [Source:NCBI gene;Acc:101174845]) HSP 1 Score: 525.783 bits (1353), Expect = 1.066e-156 Identity = 314/773 (40.62%), Postives = 443/773 (57.31%), Query Frame = 2 Query: 779 TERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEER--------------NESLLQQKMECE-----RIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNR-----KCEALTRRPKFAP----------IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFP--------------KKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETE---NKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXX---------XXIQDILQRAETTNHDDESHNPANDLLSAFKVV 2917 ER++ KW S+ H +W SE ++ M + F+ Q++ ++ P +D + EE++ E L+ ++ E RI++ ++ ++ + YLIKW+ L Y +TWE+ D+ + P + R + R K + +RP+ P QPDYL T L YQL+G+NWL +W +G ILADEMGLGKT+QT FL L+ + GPFL+ PLSTI +W+ EF +WAP M ++ Y GD SR VIRE E+ F K +KFHV +T+YEL+ D L I WA L VDEAHRLKN++S+ + L + +LL+TGTP+ N+L EL+ LL+F+ P++FN F + + + E+ + +L+ +L P +LRR K DV K +PSK+E I+RV + Q + YK ILTKN+EAL+ + G+ S LN+VM+LKKCCNH L E N M S L KSSGK+MLL K+M +LKE GHRVL+FSQM +MLD++ D+L G+ ++R+DG I G +R++AID FNA G+ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ ++V +YRFV K S+EE+I + AK+KM+L HLV+ R +K SK EL++ILKFG +LF + E + ++E I +L R + D E + N+ LS+FKV Sbjct: 533 AEREFFAKWCNMSYWHCSWVSELQLE-------MHCQVMFRNYQRKNDM-----DEPPPIDFGEGEEDKCVKRKSKDPTYVHLEEKYLRFGIKMEWLMIHRILNHSVDRKNN-VHYLIKWRELPYDQATWEAEDMDLPEFEPYKQQYWNHRELMMGDDGRPGKKIKVKGRVKRPERPPENPVVDPTIKFERQPDYLDSTGGT-LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDKDSRAVIRENEFSFEDNAIRGGKRASRMKKDSSIKFHVLLTSYELITIDMAALGSIDWACLVVDEAHRLKNNQSKFFRVLNNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEVFLEEF----ADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNHPYLFPAAAMEAPKLPNGMYDGSAL---TKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVV--------RPGLGSKTGSMSKQELDDILKFGTEELFKDEGEGENKEEDSSIIHYDDKAIDRLLDRNQDATDDTELQS-MNEYLSSFKVA 1275
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Match: SMESG000033395.1 (SMESG000033395.1) HSP 1 Score: 2178.29 bits (5643), Expect = 0.000e+0 Identity = 1128/1132 (99.65%), Postives = 1129/1132 (99.73%), Query Frame = 2 Query: 71 MLDYXXXXXXXXXXXXXXXXXVILPSKTRQRSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTXXXXXXXXXXXXXFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQILPKNKE 3466 MLDYSDEESSRNSIDSSNESEVILPSKTRQRSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTSEENDDEENDDSDFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNISNENREVEEVVSELYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFNQDEELDEEQELNIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNSTSEESSEEDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQI K K+ Sbjct: 1 MLDYSDEESSRNSIDSSNESEVILPSKTRQRSLLDEIKENPDLYTTRRSERNRKEPSRFNILSERGSQGNRLSRKIYSGSTSEENDDEENDDSDFVYSKRNKKYNQKQKMEFRKRAHVSYKEVVTSDEDVGSDDSGQPKKKVAKINNSNGFTNVRDNPLLNKPLILIRGEKIDNECIEGSYDDQRMSEFISEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNISNENREVEEVVSELYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFNQDEELDEEQELNIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKIKEEEHQKALLELELGPRQRKKVKAYQVGQVNSTSEESSEEDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSECDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQIYQKIKK 1132
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Match: SMESG000047519.1 (SMESG000047519.1) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 474/1032 (45.93%), Postives = 665/1032 (64.44%), Query Frame = 2 Query: 641 SEEVNVIEEVLNFRIGFVGNTGIETSYYNKVLKNEKYGNDDNNSDETERQYLIKWREWSHIHSTWESETTVQTYQNFDGMKKLLKFKEIQKRREIWKKHHASPEDLDAAQFEEERNESLLQQKMECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDIIVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAPIREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKMLKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLFXXXXXXXXXXXXXIQDILQRAETTNHDDESHNPANDLLSAFKVVNITETAEDEDIVYIGHKGKPKLWSDIVPQDLREKI-KEEEHQKALLE-------LELGPRQRKKVKAYQVGQVNXXXXXXXXXDNKETGGKLTDKEIKSIIKVMKKFPRPLERIQSIMVEAEIIDHTEKEVYDVMKQIINGCNAVYSE-CDTEEKKNKAVFTIRKIVISVKNILQSLDDLDILHQILPK-NKEERLKFVLPFETKLANWSCMWETEDDARLLVGVFERGLDNWEAIKMDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKL 3706 SEEV+ I+E+L+ R+G G+TG ET+ YN + N + S TE+QYLIKW+ WS++H+TWESE +++ + +G KKL KF K E +K + SP++L+ F EE+ QKM+ +R+I Q +K L+Y IKWK+LDY++ T ES + +V+ LF I ++E ++ K+PN L +RP F P+ + + +S + LRDYQ GVNW+ WT G++ ILADEMGLGKTIQ I F+S LF ++ I+GP+LL+VPLSTI +W+ EF WAP + I+YTGD SR++I++ EWY P K LKF+ +TTYE+ + DK L + W FLGVDEAHRLK+ +S+LY + F TN R LITGTP+ N+++ELWALLHFIMP F ++ DFE ++ ++ E ++ L + + PF++RR KKDVEKSLP+KSEQI+R+ M KQ ELY+LIL KN+++L ET T F N+++ELKKCCNHV+L++ E+ +N Y IKSSGKM++LDKL+ LK + HRVLIFSQMVRMLDI+ DYL ++GWGFQRLDGS +R +AI +FNA+ STDFCFLLSTRAGGLGINL TADTVIIFDSDWNP DLQAMARAHRIGQ +QVS+YRFVIKNS+EEKIIE AKRKMVLDHL+IQRM++ + T N D+ IL+F A ++F ++ + ++ + N+Q IL++AE + D S A LS+FKV+++ E + + K W D++P+ + + K A+++ LE+ P+ K+ +N + GKL E + ++ ++KF P +RI+ I E +++ +E ++ + + +II+GC + E CD ++ N F I K ++ +D L+ LH I+ + ++EER++ +TK +W+C W EDD RLLVGVFE G+ +W+ IK D LKL SKIL S S PQ HL TRV YLL L Sbjct: 93 SEEVDTIQEILDTRLGAPGDTGDETTIYNSIYN----PNPSHASRGTEQQYLIKWKNWSYVHATWESEESLKARGHIEGRKKLDKFIATFKEAERYK-NSCSPDELERRLFAEEQIRERNYQKMQIDRVIHKQYDK-VGGLEYFIKWKSLDYKFVTAESAESVVEPLFKGAIADYENNLKNNKVPNNNNMYLRKRPVFFPLPKTVTFGLPSSRLCLRDYQEIGVNWMMKLWTIGHNGILADEMGLGKTIQIISFISMLFRRYDIYGPYLLIVPLSTIDNWKREFETWAPEIYTIVYTGDIASREIIKKYEWYQPNTKTLKFNALLTTYEIAMNDKALLGNVYWTFLGVDEAHRLKSPDSKLYKTIYPFRTNCRFLITGTPLQNNIKELWALLHFIMPSIFASFEDFEQKFGNTDNETLCNEKLANLREAISPFIIRREKKDVEKSLPAKSEQILRINMSHKQKELYRLILAKNFDSLLAETNKRT-IFKNVIVELKKCCNHVELIS---EKFKNLHSLPERQEYLIKSSGKMIVLDKLLTHLKSENHRVLIFSQMVRMLDILDDYLCMKGWGFQRLDGSRSSVMRNEAIKNFNAQNSTDFCFLLSTRAGGLGINLTTADTVIIFDSDWNPHADLQAMARAHRIGQTKQVSIYRFVIKNSVEEKIIERAKRKMVLDHLIIQRMEA--NGITSKNNKTKLEADDFEAILRFSAQEIF-KECDDSDDADFNLQTILKQAEVRDQDTSSATSA--FLSSFKVISL----EPDKLESPAEIADAKNWCDLIPKKYIDTLHKNRGDINAIMDMIPKTKPLEVNPKTNSKI------NINVP---------QPPNGKLNRIETRKLVTTIQKFGCPQKRIEKIQSETQLLKLSENQLCNCIMEIIDGCRKIVVENCDADD-LNSLTFEYNGYHIVAKTLITKIDSLNELHMIMTQYSEEERIQHEFITKTKPTSWNCEWTREDDNRLLVGVFEHGMSSWKEIKYDPKLKLKSKILKSDKSILPQEKHLSTRVHYLLDVL 1089
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Match: SMESG000033397.1 (SMESG000033397.1) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 2 Query: 3599 MDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHVTNPKSAEFVESSDNSSRXXXXXXXXXXXXXXXXXXXXXXXXXRESKSHGDDDHEHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSEVXXXXXXXXXXXXXXXXGKHDSFINKGSESVKESKTQSDKVKCNFEARSYQEYIKMKNWNGETTKTFDDNNRNEKYKPYSRSSFNDKRNDKTYKSYHDRDDKSDFDRNRKSGSSYNNFEXXXXXXXXXXXXGANFSRDPRLSKSTIN 4738 MDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLRDSKIVVKSESVVVKKVIKSSKVDINKKSKVKTKVNHVTNPKSAEFVESSDNSSRKSDAKNKSKHKSKSNKSKSVSENPKRESKSHGDDDHEHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSEVKSINKDSSNNNKQNNNGKHDSFINKGSESVKESKTQSDKVKCNFEARSYQEYIKMKNWNGETTKTFDDNNRNEKYKPYSRSSFNDKRNDKTYKSYHDRDDKSDFDRNRKSGSSYNNFENSQSNYKSNSKSGANFSRDPRLSKSTIN Sbjct: 1 MDLDLKLTSKILPSSASERPQASHLRTRVEYLLKKLRDSKIVVKSESVVVKKVIKSSKVDINKKSKVKTKVNHVTNPKSAEFVESSDNSSRKSDAKNKSKHKSKSNKSKSVSENPKRESKSHGDDDHEHLFYEMQGPLFDKCTKRMKPIKSKLKFLEDMQRRSGSKIKVDDKQLSDCLLAIGNHIRSVILNFDNDEQKRQWRNYLWSFVNFFFDVFPKETLHRIYKSAYKKSEVKSINKDSSNNNKQNNNGKHDSFINKGSESVKESKTQSDKVKCNFEARSYQEYIKMKNWNGETTKTFDDNNRNEKYKPYSRSSFNDKRNDKTYKSYHDRDDKSDFDRNRKSGSSYNNFENSQSNYKSNSKSGANFSRDPRLSKSTIN 380
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Match: SMESG000068192.1 (SMESG000068192.1) HSP 1 Score: 503.827 bits (1296), Expect = 1.353e-149 Identity = 284/628 (45.22%), Postives = 385/628 (61.31%), Query Frame = 2 Query: 1010 MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDI---------------IVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAP-------IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKM--------------LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 M+ RIID ++N +S+ YLIKW+ L Y TWE D I++ LF I ++++ ++ IP K L + P P + +QPDY+ T KL YQL+G+NWL ++ ILADEMGLGKTIQTI FL L+ + GPFL+ PLST+ +W+ EF WAP ++ Y GD SR V+RE E+ + + M KFHV +T+YEL+ D+ L ISW L VDEAHRLKN++S+ + L ++ N +LL+TGTP+ N+L EL+ LLHF+ P+KFN F D + + EE V L+++L LLRR K DV +PSK E I+RV + Q + YK ILT+N++ALS + G S +NIVM+LKKCCNH L +E + IK+SGK+ LL K++ +LK GHRVLIFSQM R+LDI+ D++ G+ F+R+DG++ G R+ +ID FNA S F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ +V +YRFV +N++EE++ + AK+KM+L HLV++ L K A+ SK EL+EILKFG DLF Sbjct: 626 MQIHRIIDHMTHRN-NSIWYLIKWRDLAYDECTWEQLDGEYEVIDMKHLVEEYHIMRKLFTGDI--YKKKFKNSSIP--KEIILKKIPPEHPTTDLKKRMSKQPDYIEETGG-KLHQYQLEGLNWLRFSFGNVVDTILADEMGLGKTIQTITFLYSLYKEGHSKGPFLVAAPLSTVINWEREFEFWAPDFYVVTYVGDKDSRAVVREHEFSYEEGAMRTSKHACRMRQGTRTKFHVLLTSYELISIDQALLGSISWEVLVVDEAHRLKNNQSKFFRILSSYKINYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFLDEF----ADISKEEQVKRLHEILGEHLLRRLKADVLTDMPSKGEFIVRVELSPMQAKFYKYILTRNFDALSVKGGGSQISLINIVMDLKKCCNHPYLFPSGSDEAPKLRNGAYEGLALIKASGKLELLYKMLPKLKTGGHRVLIFSQMTRLLDILEDFMDYMGYKFERIDGAVTGQQRQDSIDRFNAPDSVSFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRNTVEERVTQVAKKKMMLTHLVVR---PGLGGKGGAS----MSKKELDEILKFGTEDLF 1236
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Match: SMESG000068192.1 (SMESG000068192.1) HSP 1 Score: 503.827 bits (1296), Expect = 1.364e-149 Identity = 284/628 (45.22%), Postives = 385/628 (61.31%), Query Frame = 2 Query: 1010 MECERIIDAQRNKNSDSLDYLIKWKTLDYRYSTWESGDI---------------IVKNLFPNGIIEFEERSRSVKIPNRKCEALTRRPKFAP-------IREQPDYLSHTSDMKLRDYQLDGVNWLAHAWTRGNSVILADEMGLGKTIQTIGFLSYLFNQHTIFGPFLLVVPLSTISSWQTEFNIWAPYMNIIIYTGDAVSRQVIRECEWYFPKKKM--------------LKFHVCITTYELLLKDKDWLNKISWAFLGVDEAHRLKNDESQLYNFLITFDTNTRLLITGTPVHNSLRELWALLHFIMPDKFNTWPDFEDRYNIXXXXXXXXXXXXXLYKVLEPFLLRRTKKDVEKSLPSKSEQIIRVPMCRKQTELYKLILTKNYEALSKETRGHTSSFLNIVMELKKCCNHVQLVNPLDEETENKMDPDSHLRYYIKSSGKMMLLDKLMFELKEKGHRVLIFSQMVRMLDIISDYLVLRGWGFQRLDGSIKGSLRKQAIDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMARAHRIGQKRQVSVYRFVIKNSIEEKIIECAKRKMVLDHLVIQRMDSALHRKTDANKNQPFSKDELNEILKFGAADLF 2785 M+ RIID ++N +S+ YLIKW+ L Y TWE D I++ LF I ++++ ++ IP K L + P P + +QPDY+ T KL YQL+G+NWL ++ ILADEMGLGKTIQTI FL L+ + GPFL+ PLST+ +W+ EF WAP ++ Y GD SR V+RE E+ + + M KFHV +T+YEL+ D+ L ISW L VDEAHRLKN++S+ + L ++ N +LL+TGTP+ N+L EL+ LLHF+ P+KFN F D + + EE V L+++L LLRR K DV +PSK E I+RV + Q + YK ILT+N++ALS + G S +NIVM+LKKCCNH L +E + IK+SGK+ LL K++ +LK GHRVLIFSQM R+LDI+ D++ G+ F+R+DG++ G R+ +ID FNA S F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA +RAHRIGQ +V +YRFV +N++EE++ + AK+KM+L HLV++ L K A+ SK EL+EILKFG DLF Sbjct: 626 MQIHRIIDHMTHRN-NSIWYLIKWRDLAYDECTWEQLDGEYEVIDMKHLVEEYHIMRKLFTGDI--YKKKFKNSSIP--KEIILKKIPPEHPTTDLKKRMSKQPDYIEETGG-KLHQYQLEGLNWLRFSFGNVVDTILADEMGLGKTIQTITFLYSLYKEGHSKGPFLVAAPLSTVINWEREFEFWAPDFYVVTYVGDKDSRAVVREHEFSYEEGAMRTSKHACRMRQGTRTKFHVLLTSYELISIDQALLGSISWEVLVVDEAHRLKNNQSKFFRILSSYKINYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFLDEF----ADISKEEQVKRLHEILGEHLLRRLKADVLTDMPSKGEFIVRVELSPMQAKFYKYILTRNFDALSVKGGGSQISLINIVMDLKKCCNHPYLFPSGSDEAPKLRNGAYEGLALIKASGKLELLYKMLPKLKTGGHRVLIFSQMTRLLDILEDFMDYMGYKFERIDGAVTGQQRQDSIDRFNAPDSVSFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRNTVEERVTQVAKKKMMLTHLVVR---PGLGGKGGAS----MSKKELDEILKFGTEDLF 1236 The following BLAST results are available for this feature:
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Chromodomain-helicase-DNA-binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30006818 ID=SMED30006818|Name=Chromodomain-helicase-DNA-binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=4789bpback to top protein sequence of SMED30006818-orf-1 >SMED30006818-orf-1 ID=SMED30006818-orf-1|Name=SMED30006818-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1559bp MTMLDYSDEESSRNSIDSSNESEVILPSKTRQRSLLDEIKENPDLYTTRRback to top Annotated Terms
The following terms have been associated with this transcript:
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