UDG domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30006813 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of UDG domain-containing protein vs. Ensembl Human
Match: TDG (thymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]) HSP 1 Score: 174.866 bits (442), Expect = 3.079e-47 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 + LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K Sbjct: 120 LTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK 300
BLAST of UDG domain-containing protein vs. Ensembl Human
Match: TDG (thymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]) HSP 1 Score: 174.481 bits (441), Expect = 4.002e-47 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 + LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K Sbjct: 116 LTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK 296
BLAST of UDG domain-containing protein vs. Ensembl Human
Match: TDG (thymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]) HSP 1 Score: 149.443 bits (376), Expect = 8.091e-40 Identity = 73/156 (46.79%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 232 SAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARM-LDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K Sbjct: 2 AAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK 157
BLAST of UDG domain-containing protein vs. Ensembl Human
Match: TDG (thymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]) HSP 1 Score: 118.627 bits (296), Expect = 4.093e-29 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNS 570 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW +SEV L DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T + Sbjct: 124 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFW--LSEVQL-----NHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET 257
BLAST of UDG domain-containing protein vs. Ensembl Human
Match: TDG (thymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]) HSP 1 Score: 81.6481 bits (200), Expect = 6.892e-18 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSK 411 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS+ Sbjct: 28 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSR 109
BLAST of UDG domain-containing protein vs. Ensembl Fly
Match: Thd1 (gene:FBgn0026869 transcript:FBtr0333706) HSP 1 Score: 216.468 bits (550), Expect = 4.598e-58 Identity = 92/171 (53.80%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRD 669 I +PD++ ++LD+V++G+NP L +A GH++AGPGNHFW C+ GL E ++ +D +++ IGFTN +RATKG+ADL++KE+K+G ++LL KLQRF PK+ VFNGK +E F K F G+QP+R++GT++ ++VMPSSSARCAQLPRAADK+PF++ALK RD Sbjct: 775 IKRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKLIKQGIGFTNMVARATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSGKKEFHFGRQPDRVDGTDTFIWVMPSSSARCAQLPRAADKVPFYAALKKFRD 945
BLAST of UDG domain-containing protein vs. Ensembl Fly
Match: Thd1 (gene:FBgn0026869 transcript:FBtr0345197) HSP 1 Score: 216.468 bits (550), Expect = 4.598e-58 Identity = 92/171 (53.80%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRD 669 I +PD++ ++LD+V++G+NP L +A GH++AGPGNHFW C+ GL E ++ +D +++ IGFTN +RATKG+ADL++KE+K+G ++LL KLQRF PK+ VFNGK +E F K F G+QP+R++GT++ ++VMPSSSARCAQLPRAADK+PF++ALK RD Sbjct: 775 IKRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKLIKQGIGFTNMVARATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSGKKEFHFGRQPDRVDGTDTFIWVMPSSSARCAQLPRAADKVPFYAALKKFRD 945
BLAST of UDG domain-containing protein vs. Ensembl Fly
Match: Thd1 (gene:FBgn0026869 transcript:FBtr0089106) HSP 1 Score: 216.468 bits (550), Expect = 4.598e-58 Identity = 92/171 (53.80%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRD 669 I +PD++ ++LD+V++G+NP L +A GH++AGPGNHFW C+ GL E ++ +D +++ IGFTN +RATKG+ADL++KE+K+G ++LL KLQRF PK+ VFNGK +E F K F G+QP+R++GT++ ++VMPSSSARCAQLPRAADK+PF++ALK RD Sbjct: 775 IKRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKLIKQGIGFTNMVARATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSGKKEFHFGRQPDRVDGTDTFIWVMPSSSARCAQLPRAADKVPFYAALKKFRD 945
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Match: tdg.1 (thymine DNA glycosylase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-44]) HSP 1 Score: 172.94 bits (437), Expect = 1.829e-46 Identity = 83/177 (46.89%), Postives = 118/177 (66.67%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD V+IG+NP L +A IG +F GPGNHFW C+ G + + DD + + Y IGFTN +RAT G+ DLS KEL++G K+L+ K+++F P I VFNGK YE F R K G QP+++ +++ +++MPSSSARCAQ PRA DK+ F+ L++LRD++K Sbjct: 152 LPDILIPNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTEKLLNHMDDQSLPEKYGIGFTNMVARATPGSKDLSSKELREGGKILVEKIKQFKPLIAVFNGKCIYEMFCRELFGKKPKTLEFGLQPHKIPDSDTALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLK 328
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Match: tdg.1 (thymine DNA glycosylase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-44]) HSP 1 Score: 172.94 bits (437), Expect = 1.829e-46 Identity = 83/177 (46.89%), Postives = 118/177 (66.67%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD V+IG+NP L +A IG +F GPGNHFW C+ G + + DD + + Y IGFTN +RAT G+ DLS KEL++G K+L+ K+++F P I VFNGK YE F R K G QP+++ +++ +++MPSSSARCAQ PRA DK+ F+ L++LRD++K Sbjct: 152 LPDILIPNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTEKLLNHMDDQSLPEKYGIGFTNMVARATPGSKDLSSKELREGGKILVEKIKQFKPLIAVFNGKCIYEMFCRELFGKKPKTLEFGLQPHKIPDSDTALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLK 328
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Match: tdg.2 (thymine DNA glycosylase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-30]) HSP 1 Score: 167.162 bits (422), Expect = 1.028e-44 Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD I +LDM++IG+NP L SA G ++ PGNHFW C+ GL E + D + + Y IGFTN R T G+ DLS KE+++G LL KLQ + P I VFNGK YE F V+ K+ G QP ++ T +V ++MPSSS RCAQ PRA DK+ F+ LK+LRD++K Sbjct: 133 LPDVITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTNEQLNHMHDQTLPEHYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQTYRPLIAVFNGKCIYEIFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQLK 309
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Match: tdg.2 (thymine DNA glycosylase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-30]) HSP 1 Score: 167.162 bits (422), Expect = 1.056e-44 Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD I +LDM++IG+NP L SA G ++ PGNHFW C+ GL E + D + + Y IGFTN R T G+ DLS KE+++G LL KLQ + P I VFNGK YE F V+ K+ G QP ++ T +V ++MPSSS RCAQ PRA DK+ F+ LK+LRD++K Sbjct: 132 LPDVITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTNEQLNHMHDQTLPEHYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQTYRPLIAVFNGKCIYEIFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQLK 308
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Match: tdg.2 (thymine DNA glycosylase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-30]) HSP 1 Score: 81.6481 bits (200), Expect = 4.307e-17 Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLS 408 LPD I +LDM++IG+NP L SA G ++ PGNHFW C+ GL E + D + + Y IGFTN R T G+ DLS Sbjct: 132 LPDVITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTNEQLNHMHDQTLPEHYGIGFTNMVERTTPGSKDLS 212
BLAST of UDG domain-containing protein vs. Ensembl Xenopus
Match: tdg (thymine DNA glycosylase [Source:NCBI gene;Acc:448432]) HSP 1 Score: 174.481 bits (441), Expect = 8.103e-47 Identity = 84/177 (47.46%), Postives = 117/177 (66.10%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + + Y IGFTN R T G+ DLS KE ++G ++LL KLQ++ P++ FNGK YE F V+ K F G QP+R+ T++V +VMPSSSARCAQ PRA DK+ + LK+LR+++K Sbjct: 159 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTVCYVMPSSSARCAQFPRAQDKVHHYIKLKELRNQLK 335
BLAST of UDG domain-containing protein vs. Ensembl Xenopus
Match: tdg (thymine DNA glycosylase [Source:NCBI gene;Acc:448432]) HSP 1 Score: 174.481 bits (441), Expect = 1.216e-46 Identity = 84/177 (47.46%), Postives = 117/177 (66.10%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + + Y IGFTN R T G+ DLS KE ++G ++LL KLQ++ P++ FNGK YE F V+ K F G QP+R+ T++V +VMPSSSARCAQ PRA DK+ + LK+LR+++K Sbjct: 172 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTVCYVMPSSSARCAQFPRAQDKVHHYIKLKELRNQLK 348
BLAST of UDG domain-containing protein vs. Ensembl Xenopus
Match: tdg (thymine DNA glycosylase [Source:NCBI gene;Acc:448432]) HSP 1 Score: 173.711 bits (439), Expect = 2.580e-46 Identity = 84/177 (47.46%), Postives = 117/177 (66.10%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + + Y IGFTN R T G+ DLS KE ++G ++LL KLQ++ P++ FNGK YE F V+ K F G QP+R+ T++V +VMPSSSARCAQ PRA DK+ + LK+LR+++K Sbjct: 159 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTVCYVMPSSSARCAQFPRAQDKVHHYIKLKELRNQLK 335
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Match: Tdg (thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]) HSP 1 Score: 176.407 bits (446), Expect = 4.843e-48 Identity = 102/260 (39.23%), Postives = 146/260 (56.15%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTG 927 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K R ++EV DL+L + DA K ++ + + A GG + N N E S LT+ + Sbjct: 111 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK-------GIERNADVQEVQYTF-----DLQLAQ-EDAKKMAVKEEKYDPGYE--AAYGGAYGENPCNGEPCGIASNGLTAHSA 355
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Match: Tdg (thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]) HSP 1 Score: 176.792 bits (447), Expect = 6.411e-48 Identity = 102/260 (39.23%), Postives = 146/260 (56.15%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTG 927 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K R ++EV DL+L + DA K ++ + + A GG + N N E S LT+ + Sbjct: 135 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK-------GIERNADVQEVQYTF-----DLQLAQ-EDAKKMAVKEEKYDPGYE--AAYGGAYGENPCNGEPCGIASNGLTAHSA 379
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Match: Tdg (thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-31 Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNS 570 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T + Sbjct: 27 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET 167
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Match: Tdg (thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]) HSP 1 Score: 91.2781 bits (225), Expect = 1.584e-20 Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 439 LLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K Sbjct: 2 LVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK 87
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Match: Tdg (thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]) HSP 1 Score: 81.2629 bits (199), Expect = 5.064e-18 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSK 411 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS+ Sbjct: 28 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSR 109
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Match: sp|P56581|TDG_MOUSE (G/T mismatch-specific thymine DNA glycosylase OS=Mus musculus OX=10090 GN=Tdg PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 4.484e-47 Identity = 102/260 (39.23%), Postives = 146/260 (56.15%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTG 927 LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K R ++EV DL+L + DA K ++ + + A GG + N N E S LT+ + Sbjct: 135 LPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK-------GIERNADVQEVQYTF-----DLQLAQ-EDAKKMAVKEEKYDPGYE--AAYGGAYGENPCNGEPCGIASNGLTAHSA 379
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Match: sp|Q13569|TDG_HUMAN (G/T mismatch-specific thymine DNA glycosylase OS=Homo sapiens OX=9606 GN=TDG PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.479e-46 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARML-DYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 + LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + DD + Y IGFTN R T G+ DLS KE ++G ++L+ KLQ++ P+I VFNGK YE F V+ K+ G QP+++ T ++ +VMPSSSARCAQ PRA DK+ ++ LKDLRD++K Sbjct: 120 LTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK 300
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Match: sp|O59825|TDG_SCHPO (G/U mismatch-specific uracil DNA glycosylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=thp1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.555e-23 Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 1 Query: 151 DP-ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVP--EPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVF-NGKGTYETFVRH-------KHFGMGKQPNRLEGTNSVVFVMPSSSARCA 609 DP +L +PDYI E+ +++GLNP +TS+ GH FA P N FW +++ L+ T +D + + +G TN C+R + ADL K+E++DG ++L K++R+ P++ +F +GKG +E + K F G QP + N VFV SSS R A Sbjct: 135 DPALLQGVPDYICENPYAIIVGLNPGITSSLKGHAFASPSNRFWKMLNKSKLLEGNAEFTYLNDKDLPAHGLGITNLCARPSSSGADLRKEEMQDGARILYEKVKRYRPQVGLFISGKGIWEEMYKMLTGKKLPKTFVFGWQPEKFGDAN--VFVGISSSGRAA 296
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6D9D7|MUG_PECAS (G/U mismatch-specific DNA glycosylase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=mug PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.820e-17 Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 1 Query: 166 ILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKD 660 ++ D + +L +V G+NP L++A G++FA P N FW I + G +T ++ +LD G T R T A +L + EL G ++ K+ R+ P+ + GK + K G+Q R+ T V PS R A AL+D Sbjct: 1 MITDILAMNLQVVFCGINPGLSTAHHGYHFANPNNRFWKVIHQAGFTERLLTPAEEQHLLDTGCGITMLVERPTVEATELGRDELLQGGNAIVEKMTRYQPRALAVLGKQAFSQAFGIKKVSWGRQERRIGETQVWVLPNPSGLNRATLESLVASYQELHQALQD 165
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Match: sp|C6DKG5|MUG_PECCP (G/U mismatch-specific DNA glycosylase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=mug PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.256e-16 Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 1 Query: 166 ILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKD 660 ++ D + +L +V G+NP L++A G++FA P N FW I VG +T ++ +LD G T R T A +L + EL G ++ K++R+ P+ + GK + K G+Q + T V PS R A AL+D Sbjct: 1 MITDILAMNLQVVFCGINPGLSTAHHGYHFANPSNRFWKVIHHVGFTERLLTPAEEQHLLDTGCGITMLVERPTVEATELGRDELLQGGNAIVEKMERYQPRALAVLGKQAFSQAFGIKKVSWGRQSLNIGETQVWVLPNPSGLNRATLESLVASYQELHQALQD 165
BLAST of UDG domain-containing protein vs. TrEMBL
Match: A0A1S8WRA8 (Uracil-DNA glycosylase family protein (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_07237 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.987e-79 Identity = 123/227 (54.19%), Postives = 167/227 (73.57%), Query Frame = 1 Query: 166 ILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANAL 846 +LPD++KE LD+V++G+NPSL SA +GH++AGPGNHFW+CIS+ GLVPE VTCYDD RMLDY IGFTN C+R TKGAA+L++KE+K G ++L K++++ PKI VFNGKG YE +V HK+F MG+QP L+GT++ +FVMPSSSARCAQLPRA DK+PFF AL+ LRD I+ +P EV +F D+ + +T+ S +AE++RK + + Sbjct: 92 VLPDHLKEGLDIVIVGINPSLASASVGHHYAGPGNHFWTCISQAGLVPEMVTCYDDERMLDYGIGFTNVCTRPTKGAAELTRKEMKAGAAIMLEKMRKYRPKIAVFNGKGIYEAYVGHKNFSMGRQPTTLDGTDTTIFVMPSSSARCAQLPRAEDKLPFFVALRKLRDYIRGDLSE-------LPDSEV---VFADYTEFRVTQ-----PDPKSLRKAERRRKPSLM 303
BLAST of UDG domain-containing protein vs. TrEMBL
Match: A0A3R7CLJ3 (G/T mismatch-specific thymine DNA glycosylase (Fragment) OS=Clonorchis sinensis OX=79923 GN=TDG PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.890e-79 Identity = 118/204 (57.84%), Postives = 157/204 (76.96%), Query Frame = 1 Query: 166 ILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTR 777 +LPD++KE LD+V++G+NPSL SA +GH++AGPGNHFW+CIS+ GLVPE VTCYDD RMLDY IGFTN C+R TKGAA+L++KE+K G ++L K++++ PKI VFNGKG YE +V HK+F MG+QP L+GT++ +FVMPSSSARCAQLPRA DK+PFF AL+ LRD I+ +P EV +F D+ + +T+ Sbjct: 53 VLPDHLKEGLDIVIVGINPSLASASVGHHYAGPGNHFWTCISQAGLVPEMVTCYDDERMLDYGIGFTNVCTRPTKGAAELTRKEMKAGAAIMLEKMRKYRPKIAVFNGKGIYEAYVGHKNFSMGRQPTTLDGTDTTIFVMPSSSARCAQLPRAEDKLPFFVALRKLRDYIRGDLSE-------LPDSEV---VFADYTEFRVTQ 246
BLAST of UDG domain-containing protein vs. TrEMBL
Match: A0A074ZXA2 (UDG domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_11500 PE=4 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 2.363e-78 Identity = 118/204 (57.84%), Postives = 157/204 (76.96%), Query Frame = 1 Query: 166 ILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTR 777 +LPD++KE LD+V++G+NPSL SA +GH++AGPGNHFW+CIS+ GLVPE VTCYDD RMLDY IGFTN C+R TKGAA+L++KE+K G ++L K++++ PKI VFNGKG YE +V HK+F MG+QP L+GT++ +FVMPSSSARCAQLPRA DK+PFF AL+ LRD I+ +P EV +F D+ + +T+ Sbjct: 71 VLPDHLKEGLDIVIVGINPSLASASVGHHYAGPGNHFWTCISQAGLVPEMVTCYDDERMLDYGIGFTNVCTRPTKGAAELTRKEMKAGAAIMLEKMRKYRPKIAVFNGKGIYEAYVGHKNFSMGRQPTTLDGTDTTIFVMPSSSARCAQLPRAEDKLPFFVALRKLRDYIRGDLSE-------LPDSEV---VFADYTEFRVTQ 264
BLAST of UDG domain-containing protein vs. TrEMBL
Match: A0A183PSR6 (UDG domain-containing protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS17402 PE=4 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.731e-77 Identity = 114/203 (56.16%), Postives = 156/203 (76.85%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTR 777 LPD++KE LD+V++G+NPSL SA +GH++AGPGNHFW+C+S+ GLVP V+CYDD++MLDY IGFTN C+R TKGAA+L++KE+K G ++L K++++ PKI VFNGKG YE +V HK+F MG+QP L+GT+ V+FVMPSSSARCAQLPRA DK+PFF AL+ LRD ++ +P EV +F D+ + +T+ Sbjct: 25 LPDHLKEGLDIVIVGINPSLASAHVGHHYAGPGNHFWTCLSQAGLVPMAVSCYDDSKMLDYGIGFTNVCTRPTKGAAELTRKEMKAGAAIMLEKMRKYKPKIAVFNGKGIYEAYVGHKNFCMGRQPTTLDGTDIVIFVMPSSSARCAQLPRAEDKLPFFLALRKLRDYVRGDLAE-------LPDSEV---VFADYTEFRVTQ 217
BLAST of UDG domain-containing protein vs. TrEMBL
Match: A0A1I8H260 (UDG domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.230e-77 Identity = 114/169 (67.46%), Postives = 145/169 (85.80%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKI 675 LP+Y+ E LDM+VIG+NPS+TSA +GH++AGPGNHFWSC+SE GL+PEP+TC+DD RML + +G TN C+R TKGAA+L++KE+K+G++ LL KL+R+ PKI VFNGKG YE FV +K+F MGKQP RL GT+ VVFVMPSSSARCAQLPRAADK+PF+ AL+ LRD + Sbjct: 131 LPEYLAEGLDMIVIGINPSITSAFVGHHYAGPGNHFWSCVSESGLIPEPMTCHDDDRMLQFGVGLTNVCTRPTKGAAELTRKEMKEGVESLLVKLKRYKPKIAVFNGKGIYEAFVGNKNFYMGKQPERLPGTDIVVFVMPSSSARCAQLPRAADKLPFYLALRKLRDHV 299
BLAST of UDG domain-containing protein vs. Ensembl Cavefish
Match: tdg.2 (G/T mismatch-specific thymine DNA glycosylase-like [Source:NCBI gene;Acc:103045467]) HSP 1 Score: 174.866 bits (442), Expect = 1.623e-47 Identity = 86/177 (48.59%), Postives = 114/177 (64.41%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD I DLD+++IG+NP L SA G ++ PGNHFW C+ GL E + D + D + IGFTN R T G+ DLS KE+++G K LL KLQ + P+I FNGKG YE F V+ K+ G QP ++ GT +V ++MPSSS RCAQ PRA DK+ F+ LK+LRD++K Sbjct: 135 LPDIITYDLDILIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTEEQLNYMHDQTLPDRHGIGFTNMVERTTPGSKDLSNKEIREGGKQLLEKLQMYRPRIAAFNGKGIYEIFCKEIFGVKAKNLEFGLQPYKVPGTETVCYLMPSSSPRCAQFPRAQDKVHFYIRLKELRDQMK 311
BLAST of UDG domain-containing protein vs. Ensembl Cavefish
Match: tdg.1 (G/T mismatch-specific thymine DNA glycosylase [Source:NCBI gene;Acc:103043944]) HSP 1 Score: 170.629 bits (431), Expect = 1.194e-45 Identity = 82/177 (46.33%), Postives = 116/177 (65.54%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD + +LD V+IG+NP L +A IG +F GPGNHFW C+ G + + D + + Y IGFTN +RAT G+ DLS KEL++G K+L+ K+++F P I VFNGK YE F R K G QP+++ + + +++MPSSSARCAQ PRA DK+ F+ L++LRD++K Sbjct: 156 LPDILTPNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTDQLLNHMHDQTLPEKYGIGFTNMVARATPGSKDLSSKELREGGKILVEKIKQFKPLIAVFNGKCIYEMFCREIFGKKPKTLEFGLQPHKIPDSETALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLK 332
BLAST of UDG domain-containing protein vs. Ensembl Sea Lamprey
Match: tdg.2 (thymine DNA glycosylase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-30]) HSP 1 Score: 179.874 bits (455), Expect = 1.038e-49 Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1 Query: 157 ILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 +L LPD + +LD+V+IG+NP L +A GH++ GPGNHFW C+ GL + + DD + + Y IGFTN R T G+ DL KE+++G K+LL KLQ+F P I VFNGK +E F + K+F G+QPN++ T+ +V+VMPSSSARCAQ PRA DK+ F+ +K+LR+ K Sbjct: 169 LLKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLTDQLLNHLDDKSLPEKYGIGFTNMVERTTPGSKDLKSKEIREGGKILLQKLQKFKPTIAVFNGKCIFEIFFKEVFGEKIKNFQFGEQPNKIPETDIIVYVMPSSSARCAQFPRAQDKVHFYIKMKELRNSTK 349
BLAST of UDG domain-containing protein vs. Ensembl Nematostella
Match: EDO42559 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S194]) HSP 1 Score: 188.348 bits (477), Expect = 1.573e-54 Identity = 89/176 (50.57%), Postives = 121/176 (68.75%), Query Frame = 1 Query: 151 DPILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 D + +LPD + E+LD++ IG+NP LTSA GH++AGP NHFW C+ + GLVPE +T DD + Y IG TN R T+G++DLS+KE+KDG+ L+ K++R P + FNGKG YE F + K +G+Q + GTN VV+VMPSSS R PRA+DK+ FF+ LK LRD+ K Sbjct: 50 DVMKLLLPDRVAENLDILFIGINPGLTSAYKGHHYAGPNNHFWPCLYDSGLVPEKLTFRDDEKCPAYGIGLTNIVERTTRGSSDLSRKEIKDGVDALIVKVKRLKPLVACFNGKGIYEIFSKSK-CEIGRQTKCIPGTNVVVYVMPSSSGRTMTYPRASDKLKFFTELKSLRDEAK 224
BLAST of UDG domain-containing protein vs. Ensembl Medaka
Match: tdg.2 (G/T mismatch-specific thymine DNA glycosylase [Source:NCBI gene;Acc:101162834]) HSP 1 Score: 176.407 bits (446), Expect = 3.761e-47 Identity = 85/177 (48.02%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLD-YSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETF------VRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIK 678 LPD I +LD+++IG+NP L SA GH++ PGNHFW C+ GL E + D + + YSIGFTN R T G+ DLS KE+++G + LL KLQ++ P I FNGKG YE F V+ K+ G QP ++ T +V ++MPSSS RCAQ PRA DK+ F+ LK+LRD++K Sbjct: 276 LPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGLTEEQLNYMHDQNLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLEKLQKYKPLIAAFNGKGIYEIFCKEIFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQMK 452
BLAST of UDG domain-containing protein vs. Ensembl Medaka
Match: tdg.1 (thymine DNA glycosylase [Source:NCBI gene;Acc:101155844]) HSP 1 Score: 172.555 bits (436), Expect = 3.122e-46 Identity = 102/275 (37.09%), Postives = 147/275 (53.45%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARM-LDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTR-----------LYDAGKSN-YSTDRAEKKRKANALNG-GNHSTNRSNTEDNSRNSQNLTSQTGIG 933 LPD + +LD V+IG+NP L +A IG +F GPGNHFW C+ G + + D + + Y +GFTN +RAT G+ DLS KEL++G K+L+ KL+++ P I VFNGK YE F R + G QP+++ + +F+MPSSSARCAQ PRA DK+ F+ L++LRD++K R +EEV+ + DL+L + YD G + Y EK + G N + S+ E+ + TS T G Sbjct: 167 LPDLLDHNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTEDQLNHMHDTTLPVKYKMGFTNMVARATPGSKDLSSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGLQPHKIPDCDVALFLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLK-------GVRRNTEIEEVDYSF-----DLQLAKEDAKRLAIKEEQYDPGYEDAYGGAYVEKTAEEGQAEGQSNGHCSFSSAENKEGAQEAATSHTAEG 429
BLAST of UDG domain-containing protein vs. Ensembl Medaka
Match: tdg.1 (thymine DNA glycosylase [Source:NCBI gene;Acc:101155844]) HSP 1 Score: 173.326 bits (438), Expect = 1.673e-45 Identity = 102/275 (37.09%), Postives = 147/275 (53.45%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARM-LDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRH------KHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTR-----------LYDAGKSN-YSTDRAEKKRKANALNG-GNHSTNRSNTEDNSRNSQNLTSQTGIG 933 LPD + +LD V+IG+NP L +A IG +F GPGNHFW C+ G + + D + + Y +GFTN +RAT G+ DLS KEL++G K+L+ KL+++ P I VFNGK YE F R + G QP+++ + +F+MPSSSARCAQ PRA DK+ F+ L++LRD++K R +EEV+ + DL+L + YD G + Y EK + G N + S+ E+ + TS T G Sbjct: 167 LPDLLDHNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTEDQLNHMHDTTLPVKYKMGFTNMVARATPGSKDLSSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGLQPHKIPDCDVALFLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLK-------GVRRNTEIEEVDYSF-----DLQLAKEDAKRLAIKEEQYDPGYEDAYGGAYVEKTAEEGQAEGQSNGHCSFSSAENKEGAQEAATSHTAEG 429
BLAST of UDG domain-containing protein vs. Planmine SMEST
Match: SMESG000064938.1 (SMESG000064938.1) HSP 1 Score: 1076.23 bits (2782), Expect = 0.000e+0 Identity = 624/625 (99.84%), Postives = 625/625 (100.00%), Query Frame = 1 Query: 151 DPILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTGIGLQTNYFDCRSSDKQKPAHSPRIKEERLPNIPNHNFFMSGQTLAPNNNQWVPGAFYNSSFXXXXXXXXXXXXXXXXXXCRFPIAPIFKPNILPTSLPPSLSNVRNYXXXXXXXXXXXXDERTENSFDTSSFSSENMQLHNSTDSSEKNDCLKRNSKEEFDSQPQQSSTNFVXXXXXXXXXXXXXXCEFDRPIESRSVQPISTCSWQNVDNNNHSTDPISCNAQNAFWEQNNNIIVSSYFSARRQLPQELPMGSIFSNFQGXXXXXXXXXXXXQYQTXXXXXXXXXXXXXXNGATNXXXXXXXXXXXDQVTSSLCSVKVTPDSTSLANRKRYCFDISDADNLPNKLMIPDDNNSTNGHDQVTYTDL 2025 DPILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKSWSGGLSSGGRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQ+LTSQTGIGLQTNYFDCRSSDKQKPAHSPRIKEERLPNIPNHNFFMSGQTLAPNNNQWVPGAFYNSSFSYQPYIIDSSQYSSSQQPCRFPIAPIFKPNILPTSLPPSLSNVRNYSTASNHNSLSSSDERTENSFDTSSFSSENMQLHNSTDSSEKNDCLKRNSKEEFDSQPQQSSTNFVSLLMSDSLSLPDSPCEFDRPIESRSVQPISTCSWQNVDNNNHSTDPISCNAQNAFWEQNNNIIVSSYFSARRQLPQELPMGSIFSNFQGNNANFNDINSDNQYQTSFSISSFYSSPHSINGATNSISSIQSPLSSDQVTSSLCSVKVTPDSTSLANRKRYCFDISDADNLPNKLMIPDDNNSTNGHDQVTYTDL Sbjct: 10 DPILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKSWSGGLSSGGRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQSLTSQTGIGLQTNYFDCRSSDKQKPAHSPRIKEERLPNIPNHNFFMSGQTLAPNNNQWVPGAFYNSSFSYQPYIIDSSQYSSSQQPCRFPIAPIFKPNILPTSLPPSLSNVRNYSTASNHNSLSSSDERTENSFDTSSFSSENMQLHNSTDSSEKNDCLKRNSKEEFDSQPQQSSTNFVSLLMSDSLSLPDSPCEFDRPIESRSVQPISTCSWQNVDNNNHSTDPISCNAQNAFWEQNNNIIVSSYFSARRQLPQELPMGSIFSNFQGNNANFNDINSDNQYQTSFSISSFYSSPHSINGATNSISSIQSPLSSDQVTSSLCSVKVTPDSTSLANRKRYCFDISDADNLPNKLMIPDDNNSTNGHDQVTYTDL 634
BLAST of UDG domain-containing protein vs. Planmine SMEST
Match: SMESG000067021.1 (SMESG000067021.1) HSP 1 Score: 268.855 bits (686), Expect = 9.438e-78 Identity = 113/169 (66.86%), Postives = 144/169 (85.21%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKI 675 LPDY+KE+LD++V+G+NPS+TSA +GH++AG GNHFW+CI+E GLVPE VTCYDD RM+DY IGFTN CSR TKGAA++S+KE+K G ++L K++++ PKI VFNGKG YE F+ HK+F MGKQP L+GT+ +VFVMPSSSARCAQLPRA DK+PFF AL+ LRD + Sbjct: 105 LPDYLKENLDLIVVGINPSMTSACVGHHYAGIGNHFWTCIAEAGLVPETVTCYDDYRMVDYGIGFTNVCSRPTKGAAEISRKEMKAGALVMLEKMRKYKPKIAVFNGKGIYEAFIGHKNFYMGKQPKPLDGTDIIVFVMPSSSARCAQLPRAEDKLPFFIALRKLRDHV 273
BLAST of UDG domain-containing protein vs. Planmine SMEST
Match: SMESG000067021.1 (SMESG000067021.1) HSP 1 Score: 268.47 bits (685), Expect = 1.189e-77 Identity = 113/169 (66.86%), Postives = 144/169 (85.21%), Query Frame = 1 Query: 169 LPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHFWSCISEVGLVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKI 675 LPDY+KE+LD++V+G+NPS+TSA +GH++AG GNHFW+CI+E GLVPE VTCYDD RM+DY IGFTN CSR TKGAA++S+KE+K G ++L K++++ PKI VFNGKG YE F+ HK+F MGKQP L+GT+ +VFVMPSSSARCAQLPRA DK+PFF AL+ LRD + Sbjct: 105 LPDYLKENLDLIVVGINPSMTSACVGHHYAGIGNHFWTCIAEAGLVPETVTCYDDYRMVDYGIGFTNVCSRPTKGAAEISRKEMKAGALVMLEKMRKYKPKIAVFNGKGIYEAFIGHKNFYMGKQPKPLDGTDIIVFVMPSSSARCAQLPRAEDKLPFFIALRKLRDHV 273
BLAST of UDG domain-containing protein vs. Planmine SMEST
Match: SMESG000029306.1 (SMESG000029306.1) HSP 1 Score: 181.415 bits (459), Expect = 3.630e-51 Identity = 99/237 (41.77%), Postives = 139/237 (58.65%), Query Frame = 1 Query: 301 LVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTGIGLQTNYFDCRSSDKQKPAHSPRIKEER 1011 +V PVTC DD +MLDY IGF + C+R KG +LS+KE+K G L++ K++++ PKIVVFNG G YE F+ +K+F MG QPN++EGT+SV+FVMPSSSARCAQLPRA DKIPFF +LK LRD ++ +P E +F ++ + +T+ S +AE++RK A H+ + N +NS + N S +KP + IK+ER Sbjct: 1 MVSHPVTCEDDTQMLDYGIGFISFCTRPNKGTTELSRKEMKIGAGLMVEKIKKYKPKIVVFNGIGIYEAFIGNKNFSMGLQPNKMEGTDSVIFVMPSSSARCAQLPRAEDKIPFFVSLKKLRDHMRGD----------LPQLEEKDVVFENYTEFRVTQ-----PDPRSLLKAERRRKRKAELNAEHAL-QDNVGENSTTTTN----------------EESKSKKPMENEIIKDER 205
BLAST of UDG domain-containing protein vs. Planmine SMEST
Match: SMESG000029306.1 (SMESG000029306.1) HSP 1 Score: 181.415 bits (459), Expect = 4.903e-51 Identity = 99/237 (41.77%), Postives = 139/237 (58.65%), Query Frame = 1 Query: 301 LVPEPVTCYDDARMLDYSIGFTNACSRATKGAADLSKKELKDGMKLLLAKLQRFCPKIVVFNGKGTYETFVRHKHFGMGKQPNRLEGTNSVVFVMPSSSARCAQLPRAADKIPFFSALKDLRDKIKXXXXXXXXXXRLVPLEEVNGNIFPDHVDLELTRLYDAGKSNYSTDRAEKKRKANALNGGNHSTNRSNTEDNSRNSQNLTSQTGIGLQTNYFDCRSSDKQKPAHSPRIKEER 1011 +V PVTC DD +MLDY IGF + C+R KG +LS+KE+K G L++ K++++ PKIVVFNG G YE F+ +K+F MG QPN++EGT+SV+FVMPSSSARCAQLPRA DKIPFF +LK LRD ++ +P E +F ++ + +T+ S +AE++RK A H+ + N +NS + N S +KP + IK+ER Sbjct: 1 MVSHPVTCEDDTQMLDYGIGFISFCTRPNKGTTELSRKEMKIGAGLMVEKIKKYKPKIVVFNGIGIYEAFIGNKNFSMGLQPNKMEGTDSVIFVMPSSSARCAQLPRAEDKIPFFVSLKKLRDHMRGD----------LPQLEEKDVVFENYTEFRVTQ-----PDPRSLLKAERRRKRKAELNAEHAL-QDNVGENSTTTTN----------------EESKSKKPMENEIIKDER 205 The following BLAST results are available for this feature:
BLAST of UDG domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of UDG domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of UDG domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of UDG domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of UDG domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of UDG domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of UDG domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of UDG domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of UDG domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of UDG domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of UDG domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of UDG domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of UDG domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of UDG domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30006813 ID=SMED30006813|Name=UDG domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2408bpback to top protein sequence of SMED30006813-orf-1 >SMED30006813-orf-1 ID=SMED30006813-orf-1|Name=SMED30006813-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=635bp MNNNNSSSNDPILHILPDYIKEDLDMVVIGLNPSLTSAQIGHYFAGPGNHback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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