ATP-dependent RNA helicase DHH1

Overview


Name	ATP-dependent RNA helicase DHH1
Smed ID	SMED30006692
Length (bp)	1732

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of ATP-dependent RNA helicase DHH1 (SMED30006692) t-SNE clustered cells

Violin plots show distribution of expression levels for ATP-dependent RNA helicase DHH1 (SMED30006692) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of ATP-dependent RNA helicase DHH1 (SMED30006692) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for ATP-dependent RNA helicase DHH1 (SMED30006692) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30006692

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
whole organism	SMED30006692	SMESG000001583.1	Contig38496	newmark_ests	PMID:27612384 Roberts-Galbraith et al., 2016
whole organism	SMED30006692	SMESG000001583.1	Contig38496	uc_Smed_v2	PMID:27612384 Roberts-Galbraith et al., 2016
reproductive organ	SMED30006692	SMESG000001583.1	Contig38496	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30006692	SMESG000001583.1	Contig38496	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Human
Match: DDX6 (DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2747])

HSP 1 Score: 404.06 bits (1037), Expect = 3.165e-135
Identity = 218/402 (54.23%), Postives = 285/402 (70.90%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 482

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Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 482

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Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 482

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Human
Match: EIF4A3 (eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683])

HSP 1 Score: 231.106 bits (588), Expect = 1.999e-69
Identity = 136/373 (36.46%), Postives = 215/373 (57.64%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  ++I ++  L       Q ++L PTRELA+Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV 407

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Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  ++I ++  L       Q ++L PTRELA+Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV 407

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Celegans
Match: cgh-1 (ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3])

HSP 1 Score: 411.379 bits (1056), Expect = 2.757e-139
Identity = 218/401 (54.36%), Postives = 289/401 (72.07%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            R +T+DV     V F+DF L RD+LM ++E GWE PSPIQ  SI   + G++++ARAKNGTGKTGAY I +I  +  +  ++Q +V+VPTRELALQTS  C+ L+K++Q + +MV+TGGTD+ DDI RLN +   V  ++ATPGR LD +     K +  K  VLDEADKL+S DF+ I+  ++  L  +RQ++L+SAT+P  + SF+ K+M    +INLM ELTL GVTQYYA+++E+QK+ CL  L + L+++Q+IIFC++  RVELLAK I  +GYSCYY H+KM Q  RN+VF DFR G+ RNLVC+D++TRGIDI  VNVV NFDFP++ ETYLHRIGR GRFGHLG+AINLIT  D      IEQ+L  +I  IPK +D +LYVA  QL    DE
Sbjct:   31 RFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDLRDDIMRLNGT---VHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIPKTVDPKLYVADQQLVDAADE 427

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Celegans
Match: inf-1 (Eukaryotic initiation factor 4A [Source:UniProtKB/Swiss-Prot;Acc:P27639])

HSP 1 Score: 239.965 bits (611), Expect = 3.281e-73
Identity = 138/373 (37.00%), Postives = 217/373 (58.18%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNS-VQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLM-NELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            SFDD +L  ++L  +Y  G+E PS IQ  +I     G++VIA+A++GTGKT  +++ I+  +   +  VQ +V+ PTRELA Q       L +YL  +NI+   GGT V DD  +L      +  +V TPGR  D I  N + T  IK FVLDEAD+++S  FK  I ++   +    Q++L SAT P  +    +++M    +I +  +ELTL+G+ Q+Y  +++++        L   + V QA+IFC+T  +V+ L + +    ++    H  MDQ  R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +T+ D +   EIE     +I  +P+ I
Sbjct:   30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSVRDDQRKLEAG---IHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESI 398

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Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNS-VQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLM-NELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            SFDD +L  ++L  +Y  G+E PS IQ  +I     G++VIA+A++GTGKT  +++ I+  +   +  VQ +V+ PTRELA Q       L +YL  +NI+   GGT V DD  +L      +  +V TPGR  D I  N + T  IK FVLDEAD+++S  FK  I ++   +    Q++L SAT P  +    +++M    +I +  +ELTL+G+ Q+Y  +++++        L   + V QA+IFC+T  +V+ L + +    ++    H  MDQ  R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +T+ D +   EIE     +I  +P+ I
Sbjct:   30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSVRDDQRKLEAG---IHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESI 398

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Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNS-VQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLM-NELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            SFDD +L  ++L  +Y  G+E PS IQ  +I     G++VIA+A++GTGKT  +++ I+  +   +  VQ +V+ PTRELA Q       L +YL  +NI+   GGT V DD  +L      +  +V TPGR  D I  N + T  IK FVLDEAD+++S  FK  I ++   +    Q++L SAT P  +    +++M    +I +  +ELTL+G+ Q+Y  +++++        L   + V QA+IFC+T  +V+ L + +    ++    H  MDQ  R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +T+ D +   EIE     +I  +P+ I
Sbjct:   30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSVRDDQRKLEAG---IHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESI 398

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Celegans
Match: Y65B4A.6 (pep chromosome:WBcel235:I:629492:636350:-1 gene:WBGene00022029.1 transcript:Y65B4A.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y65B4A.6)

HSP 1 Score: 237.654 bits (605), Expect = 1.858e-72
Identity = 140/373 (37.53%), Postives = 220/373 (58.98%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +IP+I+   +VIA+A++GTGKT  ++I ++ +L T     Q ++L PTRELA+Q     + L  Y+  +      GGT++ +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  + DI  +L    Q++L SAT P  +     K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA++FC+T  +V+ L   +    ++    H  M+QK R++V  +FRAG  R L+ TDV  RG+D+P+V++V N+D P + E Y+HRIGR GRFG  G+AIN + + D++   +IEQ  + +I  +P +I
Sbjct:   27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYGQHVVS---GTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNI 395

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Match: me31B (gene:FBgn0004419 transcript:FBtr0079976)

HSP 1 Score: 382.489 bits (981), Expect = 5.202e-128
Identity = 211/393 (53.69%), Postives = 277/393 (70.48%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVAS 1571
            +R +T+DV       F++F L R++LM ++E GWE PSPIQ  +IP  + G++V+ARAKNGTGKTGAY I ++  +  T + +Q +V+VPTRELALQTS  CI LAK+L  I +MV+TGGT + DDI R+    Q VQ ++ATPGR LD +          +  VLDEADKL+S DF+ ++  ++  L    Q++LFSAT+P  +K+F++K++    +INLM ELTLKGVTQYYA+++E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GY CYY HAKM Q  RN+VF DFR G  RNLVC+D+ TRGID+  VNVV NFDFP+  ETYLHRIGR GRFGHLGIAINLIT  D      IE++L  +I  IPK ID  LYVA+
Sbjct:   14 NRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLD-IRVMVTTGGTILKDDILRI---YQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIPKVIDPALYVAN 402

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Match: me31B (gene:FBgn0004419 transcript:FBtr0079975)

HSP 1 Score: 382.489 bits (981), Expect = 1.426e-127
Identity = 211/393 (53.69%), Postives = 277/393 (70.48%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVAS 1571
            +R +T+DV       F++F L R++LM ++E GWE PSPIQ  +IP  + G++V+ARAKNGTGKTGAY I ++  +  T + +Q +V+VPTRELALQTS  CI LAK+L  I +MV+TGGT + DDI R+    Q VQ ++ATPGR LD +          +  VLDEADKL+S DF+ ++  ++  L    Q++LFSAT+P  +K+F++K++    +INLM ELTLKGVTQYYA+++E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GY CYY HAKM Q  RN+VF DFR G  RNLVC+D+ TRGID+  VNVV NFDFP+  ETYLHRIGR GRFGHLGIAINLIT  D      IE++L  +I  IPK ID  LYVA+
Sbjct:   45 NRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLD-IRVMVTTGGTILKDDILRI---YQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIPKVIDPALYVAN 433

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Match: CG7483 (gene:FBgn0037573 transcript:FBtr0081834)

HSP 1 Score: 230.335 bits (586), Expect = 1.654e-69
Identity = 140/373 (37.53%), Postives = 217/373 (58.18%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +F+   L  ++L  +Y  G+E PS IQ  SI  I+ G +VIA+A++GTGKT  ++I I+ +L TT    Q + L PTRELA+Q     + L   +  +   V  GGT++ +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +     K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R+++  +FRAG  R L+ TDV  RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   27 TFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMM-NVQCHVCIGGTNLGEDIRKLDYGQHIVS---GTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNV 395

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Match: eIF4A (gene:FBgn0001942 transcript:FBtr0079178)

HSP 1 Score: 197.593 bits (501), Expect = 3.787e-57
Identity = 140/374 (37.43%), Postives = 213/374 (56.95%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FDD  L  ++L  +Y  G+E PS IQ  +I   + G +VIA+A++GTGKT  ++I I+  + TS    Q ++L PTRELA Q     + L +Y++ ++     GGT+V +D   L +    V   V TPGR  D I    ++T+ IK FVLDEAD+++S  FK  I D+   L    Q+IL SAT P ++      +M  P+S  +    ELTL+G+ Q+Y  +K+E         L   L + Q++IFC+T  +V+ L + +    ++    H  M+Q+ R  +   FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN IT  D +   +IEQ     I  +P +I
Sbjct:   31 NFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMK-VHSHACIGGTNVREDARILESGCHVV---VGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVK-KEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANI 399

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Match: eIF4A (gene:FBgn0001942 transcript:FBtr0079175)

HSP 1 Score: 197.593 bits (501), Expect = 3.787e-57
Identity = 140/374 (37.43%), Postives = 213/374 (56.95%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FDD  L  ++L  +Y  G+E PS IQ  +I   + G +VIA+A++GTGKT  ++I I+  + TS    Q ++L PTRELA Q     + L +Y++ ++     GGT+V +D   L +    V   V TPGR  D I    ++T+ IK FVLDEAD+++S  FK  I D+   L    Q+IL SAT P ++      +M  P+S  +    ELTL+G+ Q+Y  +K+E         L   L + Q++IFC+T  +V+ L + +    ++    H  M+Q+ R  +   FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN IT  D +   +IEQ     I  +P +I
Sbjct:   31 NFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMK-VHSHACIGGTNVREDARILESGCHVV---VGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVK-KEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANI 399

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Zebrafish
Match: ddx6 (DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83])

HSP 1 Score: 402.905 bits (1034), Expect = 5.217e-135
Identity = 215/403 (53.35%), Postives = 287/403 (71.22%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKM 1604
            R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    +S+Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL+ L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  + K+
Sbjct:   85 RMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDSIQAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET---VHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEEVKL 484

[Close]

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKM 1604
            R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    +S+Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL+ L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  + K+
Sbjct:   85 RMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDSIQAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET---VHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEEVKL 484

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Zebrafish
Match: ddx61 (DEAD (Asp-Glu-Ala-Asp) box helicase 61 [Source:ZFIN;Acc:ZDB-GENE-030131-6611])

HSP 1 Score: 396.356 bits (1017), Expect = 1.685e-132
Identity = 214/392 (54.59%), Postives = 281/392 (71.68%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVA 1568
            +R++T+DV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q IVLVPTRELALQ S   IN++K+L GI +M +TGGT++ DDI RL+   + V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L  KRQ++L+SAT+P +++ F+ K++    +INLM+ELTLKG+TQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GR+GHLG+AINLIT  D      IE QL   I  IP  IDK LYVA
Sbjct:   75 TRVRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLD---EIVHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYSATFPISVQKFMTKHLQKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSIDKSLYVA 463

[Close]

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVA 1568
            +R++T+DV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q IVLVPTRELALQ S   IN++K+L GI +M +TGGT++ DDI RL+   + V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L  KRQ++L+SAT+P +++ F+ K++    +INLM+ELTLKG+TQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GR+GHLG+AINLIT  D      IE QL   I  IP  IDK LYVA
Sbjct:   75 TRVRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLD---EIVHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYSATFPISVQKFMTKHLQKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSIDKSLYVA 463

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Zebrafish
Match: eif4a3 (eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:394053])

HSP 1 Score: 226.098 bits (575), Expect = 1.188e-67
Identity = 135/373 (36.19%), Postives = 212/373 (56.84%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  + + ++  L       Q ++L PTRELA Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q+ L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV 402

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:780039])

HSP 1 Score: 391.349 bits (1004), Expect = 2.427e-130
Identity = 212/387 (54.78%), Postives = 276/387 (71.32%), Query Frame = 3

Query:  441 FDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   I+  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F+  ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  D+
Sbjct:  102 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEDK 485

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:780039])

HSP 1 Score: 390.963 bits (1003), Expect = 3.086e-130
Identity = 212/387 (54.78%), Postives = 276/387 (71.32%), Query Frame = 3

Query:  441 FDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   I+  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F+  ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  D+
Sbjct:   96 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEDK 479

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:780039])

HSP 1 Score: 369.007 bits (946), Expect = 9.288e-122
Identity = 202/387 (52.20%), Postives = 264/387 (68.22%), Query Frame = 3

Query:  441 FDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   I+  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F+  ++    +INLM ELTLKG               CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  D+
Sbjct:  102 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGKVH------------CLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEDK 473

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:780039])

HSP 1 Score: 320.857 bits (821), Expect = 2.442e-103
Identity = 186/387 (48.06%), Postives = 249/387 (64.34%), Query Frame = 3

Query:  441 FDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   I+  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F+  ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCT                                  GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  D+
Sbjct:  102 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT----------------------------------GRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEDK 451

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:780039])

HSP 1 Score: 318.546 bits (815), Expect = 1.188e-102
Identity = 190/386 (49.22%), Postives = 238/386 (61.66%), Query Frame = 3

Query:  441 FDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY                  L+P  E  L    +CI                                 V  ++ATPGR LD I     K   I+  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F+  ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  D+
Sbjct:  102 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAY------------------LIPLLE-RLDLKKDCIQ--------------------------------VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEDK 436

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
Match: Ddx6 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:MGI Symbol;Acc:MGI:104976])

HSP 1 Score: 404.445 bits (1038), Expect = 1.147e-135
Identity = 218/402 (54.23%), Postives = 285/402 (70.90%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAEDEK 482

[Close]

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAEDEK 482

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
Match: Eif4a3 (eukaryotic translation initiation factor 4A3 [Source:MGI Symbol;Acc:MGI:1923731])

HSP 1 Score: 230.72 bits (587), Expect = 2.026e-69
Identity = 135/373 (36.19%), Postives = 215/373 (57.64%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  +++ ++  L       Q ++L PTRELA+Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV 407

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
Match: Eif4a3l2 (eukaryotic translation initiation factor 4A3 like 2 [Source:MGI Symbol;Acc:MGI:3646594])

HSP 1 Score: 229.95 bits (585), Expect = 3.693e-69
Identity = 140/399 (35.09%), Postives = 226/399 (56.64%), Query Frame = 3

Query:  360 KKVQCETRSILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +K   +   + K   +TS+ + ++ ++FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  ++I ++  L       Q ++L PTRELA+Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    + T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   14 RKRLLKEEGMTKVEFETSEEVDRT-LTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLPTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNL 407

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
Match: Eif4a3l1 (eukaryotic translation initiation factor 4A3 like 1 [Source:MGI Symbol;Acc:MGI:3644226])

HSP 1 Score: 229.18 bits (583), Expect = 9.828e-69
Identity = 135/373 (36.19%), Postives = 213/373 (57.10%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  I+ G +VIA++++GTGKT  ++I ++  L       Q ++L PTRELA+Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    + T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACVGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNL 407

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BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Match: sp|Q95YF3|CGH1_CAEEL (ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans OX=6239 GN=cgh-1 PE=1 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 3.507e-138
Identity = 218/401 (54.36%), Postives = 289/401 (72.07%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            R +T+DV     V F+DF L RD+LM ++E GWE PSPIQ  SI   + G++++ARAKNGTGKTGAY I +I  +  +  ++Q +V+VPTRELALQTS  C+ L+K++Q + +MV+TGGTD+ DDI RLN +   V  ++ATPGR LD +     K +  K  VLDEADKL+S DF+ I+  ++  L  +RQ++L+SAT+P  + SF+ K+M    +INLM ELTL GVTQYYA+++E+QK+ CL  L + L+++Q+IIFC++  RVELLAK I  +GYSCYY H+KM Q  RN+VF DFR G+ RNLVC+D++TRGIDI  VNVV NFDFP++ ETYLHRIGR GRFGHLG+AINLIT  D      IEQ+L  +I  IPK +D +LYVA  QL    DE
Sbjct:   31 RFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDLRDDIMRLNGT---VHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIPKTVDPKLYVADQQLVDAADE 427

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BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Match: sp|Q5ZKB9|DDX6_CHICK (Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus OX=9031 GN=DDX6 PE=2 SV=1)

HSP 1 Score: 404.831 bits (1039), Expect = 6.325e-135
Identity = 218/402 (54.23%), Postives = 286/402 (71.14%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K + ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 482

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BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Match: sp|P54823|DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 8.026e-135
Identity = 218/402 (54.23%), Postives = 285/402 (70.90%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAEDEK 482

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BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Match: sp|P26196|DDX6_HUMAN (Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens OX=9606 GN=DDX6 PE=1 SV=2)

HSP 1 Score: 404.06 bits (1037), Expect = 1.520e-134
Identity = 218/402 (54.23%), Postives = 285/402 (70.90%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 482

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BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Match: sp|Q9WTM2|DDX6_CAVPO (Probable ATP-dependent RNA helicase DDX6 (Fragment) OS=Cavia porcellus OX=10141 GN=DDX6 PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 5.695e-134
Identity = 218/402 (54.23%), Postives = 284/402 (70.65%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L    +++Q +V+VPTRELALQ S  CI ++K++ G  +M +TGGT++ DDI RL+++   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  I+ DI+  L   RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+ +Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP +IDK LYVA +  E   DEK
Sbjct:   73 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALTGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT---VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFPRLQTNQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEK 471

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BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Match: A0A1I8IM45 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig032789g1 PE=3 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 9.704e-144
Identity = 235/410 (57.32%), Postives = 300/410 (73.17%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK---MLAS 1613
            +R++T DV      +F+DF L RD+LM +YE GWE PSPIQ  SIP  + G +V+ARAKNGTGKTGAY I ++  + TS N+VQ +++VPTRELALQTS  CI LAK+  G  IMV+TGGT++ DDI RL+   + V  ++ATPGR LD +  + +KT   K  VLDEADKL+S DFK ++  I++ L   RQ++LFSAT+P  ++ F++ Y+    +INLM ELTLKG+TQ+YAY++E+ K+ CL  L   L+++Q+IIFC+T  RVELLAK I  +GYSCYY HA+M Q  RN+VF DFR GH RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GR+GHLGIAINLIT  D     +IEQQL  +I AIPK IDKRLYV+ +Q E   D++   MLAS
Sbjct:   25 NRLRTVDVTSTKGNAFEDFNLKRDLLMGIYEKGWEKPSPIQEASIPIALTGRDVLARAKNGTGKTGAYCIPLLEKIDTSKNAVQSMIIVPTRELALQTSQICIELAKH-TGAKIMVTTGGTNLKDDIMRLD---EEVHLVIATPGRVLDLLKKDVLKTDVCKTLVLDEADKLLSQDFKIMLSGIISRLPKDRQILLFSATFPLTVQEFMETYLRTPYEINLMEELTLKGITQFYAYVQEKHKVHCLNTLFSKLQINQSIIFCNTAQRVELLAKKITELGYSCYYIHARMSQHFRNRVFHDFRQGHCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRYGHLGIAINLITYDDRFALKQIEQQLNTEIKAIPKLIDKRLYVSEYQQEGELDDETKAMLAS 430

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BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Match: A0A0R3SDD6 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS2686 PE=3 SV=1)

HSP 1 Score: 427.557 bits (1098), Expect = 1.048e-141
Identity = 227/408 (55.64%), Postives = 294/408 (72.06%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLT 1619
            R++T DV+     SF+DF L RD+L  LYE GW  PSP+Q  SIP  + G +++ARAKNGTGKTGAY +  +  +    N +Q ++LVPTRELALQTS    +++KYL GINIMV+TGGT++ DDI RL+ +   V  L+ATPGR +DF+  + +K       VLDEADKL+S  F  +I+D++  L   +Q++L+SAT+P +++SF   ++    +INLM ELTLKGVTQYYAY++E+ K+ CL  L   L+++QAIIFC+T  RVELLAK +  +GYSCYY HA+M Q  RN+VF DFRAGH RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT+ D      IE QL  +I AIPKDIDKRLYV+ +Q  S  DE+   +L+
Sbjct:   22 RLKTIDVMSTKGNSFEDFCLKRDLLKGLYEKGWSAPSPVQESSIPMALTGRDILARAKNGTGKTGAYLVPTLERIDPKINKLQALILVPTRELALQTSQIATDVSKYL-GINIMVTTGGTNLADDIARLDGA---VHCLIATPGRIVDFLHRSILKLDHCSTLVLDEADKLLSTGFNEMILDVIKSLPEHKQIMLYSATFPVSVQSFTKAHLKNPYEINLMEELTLKGVTQYYAYVQEKHKVHCLNTLFTKLQINQAIIFCNTAQRVELLAKKVTELGYSCYYIHARMSQCYRNRVFHDFRAGHCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINLITQEDCSALKAIETQLHTEIKAIPKDIDKRLYVSEYQTVSSLDEETRRALS 425

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BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Match: A0A564Z4D3 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS12254 PE=3 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 2.305e-141
Identity = 227/408 (55.64%), Postives = 294/408 (72.06%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLT 1619
            R++T DV+     SF+DF L RD+L  LYE GW  PSP+Q  SIP  + G +++ARAKNGTGKTGAY +  +  +    N +Q ++LVPTRELALQTS    +++KYL GINIMV+TGGT++ DDI RL+ +   V  L+ATPGR +DF+  + +K       VLDEADKL+S  F  +I+D++  L   +Q++L+SAT+P +++SF   ++    +INLM ELTLKGVTQYYAY++E+ K+ CL  L   L+++QAIIFC+T  RVELLAK +  +GYSCYY HA+M Q  RN+VF DFRAGH RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT+ D      IE QL  +I AIPKDIDKRLYV+ +Q  S  DE+   +L+
Sbjct:   31 RLKTIDVMSTKGNSFEDFCLKRDLLKGLYEKGWSAPSPVQESSIPMALTGRDILARAKNGTGKTGAYLVPTLERIDPKINKLQALILVPTRELALQTSQIATDVSKYL-GINIMVTTGGTNLADDIARLDGA---VHCLIATPGRIVDFLHRSILKLDHCSTLVLDEADKLLSTGFNEMILDVIKSLPEHKQIMLYSATFPVSVQSFTKAHLKNPYEINLMEELTLKGVTQYYAYVQEKHKVHCLNTLFTKLQINQAIIFCNTAQRVELLAKKVTELGYSCYYIHARMSQCYRNRVFHDFRAGHCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINLITQEDCSALKAIETQLHTEIKAIPKDIDKRLYVSEYQTVSSLDEETRRALS 434

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BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Match: A0A0R3TL87 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS7984 PE=3 SV=1)

HSP 1 Score: 426.017 bits (1094), Expect = 3.457e-141
Identity = 227/408 (55.64%), Postives = 295/408 (72.30%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLT 1619
            R++T DV+     SF+DF L RD+L  LYE GW  PSP+Q  SIP  + G +++ARAKNGTGKTGAY +  +  +    N +Q ++LVPTRELALQTS    +++KYL GINIMV+TGGT++ DDI RL+ +   V  L+ATPGR +DF+  + +K       VLDEADKL+S  F  +I++++  L   +Q++L+SAT+P +++SF   ++    +INLM ELTLKGVTQYYAY++E+ K+ CL  L   L+++QAIIFC+T LRVELLAK +  +GYSCYY HA+M Q  RN+VF DFRAGH RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT+ D      IE QL  +I AIPKDIDKRLYV+ +Q  S  DE+   +L+
Sbjct:   22 RLKTIDVISTKGNSFEDFCLKRDLLKGLYEKGWSAPSPVQESSIPMALTGRDILARAKNGTGKTGAYLVPTLERIDPKINKLQSLILVPTRELALQTSQIATDVSKYL-GINIMVTTGGTNLADDIARLDGA---VHCLIATPGRIVDFLNRSILKLDHCSTLVLDEADKLLSIGFNEMILNVIKSLPENKQIMLYSATFPVSVQSFTKAHLKNPYEINLMEELTLKGVTQYYAYVQEKHKVHCLNTLFTKLQINQAIIFCNTALRVELLAKKVTELGYSCYYIHARMSQCYRNRVFHDFRAGHCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINLITQEDCSALKAIETQLHTEIKAIPKDIDKRLYVSEYQTVSSLDEETRRALS 425

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BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Match: A0A0R3W864 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6530 PE=3 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 7.715e-141
Identity = 227/408 (55.64%), Postives = 294/408 (72.06%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLT 1619
            R++T DV+     SF+DF L RD+L  +YE GW  PSP+Q  SIP  + G +++ARAKNGTGKTGAY + I+  +  S N +Q ++LVPTRELALQTS     ++KYL GI IMV+TGGT++ DD+ RL+ +   V  L+ATPGR LDF+  + +K       VLDEADKL+S+ F   I D++ +L   RQ++L+SAT+P +++SF   ++    +INLM ELTLKGVTQ+YAY++E+ K+ CL  L   L+++QAIIFC+T  RVELLAK +  +GYSCYY HA+M Q  RN+VF DFRAGH RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT  D  +   IE QL  +I AIPKDIDKRLYV+ +Q  S  DE+   +L+
Sbjct:   22 RLKTIDVMSIKGNSFEDFCLKRDLLKGIYEKGWSTPSPVQESSIPMALSGRDILARAKNGTGKTGAYLVPILERIDPSVNKLQALILVPTRELALQTSQIATEVSKYL-GIKIMVTTGGTNLADDLARLDGA---VHCLIATPGRILDFLNRSILKMDQCSTLVLDEADKLLSSGFNETIPDVIKNLPEDRQIMLYSATFPLSVQSFTKAHLKNPYEINLMEELTLKGVTQFYAYVQEKHKVHCLNTLFSKLQINQAIIFCNTAQRVELLAKKVTELGYSCYYIHARMPQHYRNRVFHDFRAGHCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINLITHDDCYHLKAIENQLRTEIKAIPKDIDKRLYVSEYQNVSSLDEETRRALS 425

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:103046116])

HSP 1 Score: 398.667 bits (1023), Expect = 1.695e-133
Identity = 214/403 (53.10%), Postives = 286/403 (70.97%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKM 1604
            R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL+ L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  + K+
Sbjct:   85 RMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQALVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET---VHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSFLAKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESSEEVKL 484

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Match: ENSAMXT00000045184.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:103037120])

HSP 1 Score: 399.053 bits (1024), Expect = 2.143e-133
Identity = 214/396 (54.04%), Postives = 280/396 (70.71%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQL 1580
            +R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + VQ +V+VPTRELALQ S   I L+K+L G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L   RQ++L+SAT+P +++ F+ K++    +INLM ELTLKG+TQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT  D      IE QL   I  IP  IDK LYVA + L
Sbjct:   79 NRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHVQAMVMVPTRELALQVSQISIQLSKHLGGVKVMATTGGTNLRDDIMRLDET---VHVIIATPGRILDLIKKGVAKVDKVQMIVMDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPTSVQKFMSKHLQKPYEINLMEELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITAEDRFNLKAIEDQLVTDIKPIPGSIDKSLYVAEYHL 471

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Match: ddx61 (probable ATP-dependent RNA helicase DDX6 [Source:NCBI gene;Acc:103044136])

HSP 1 Score: 397.897 bits (1021), Expect = 4.112e-133
Identity = 211/392 (53.83%), Postives = 283/392 (72.19%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVA 1568
            +R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q +V+VPTRELALQ S  CI+++K+L G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ LD  RQ++L+SAT+P +++ F+ K++    +INLM+ELTLKG+TQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLA+ I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GR+GHLG+AINLIT  D      IE+QL   I  IP  IDK LYVA
Sbjct:   75 TRVKTSDVTATKGNDFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAVVMVPTRELALQMSQICISMSKHLGGVKVMATTGGTNLKDDIMRLDET---VHVVIATPGRILDLIKKGVAKVDKVQMMVMDEADKLLSQDFVVLIEDIISFLDKNRQILLYSATFPVSVQRFMAKHLRKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLARKISQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSDDRFNLKTIEEQLVTDIKPIPGSIDKSLYVA 463

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:103046116])

HSP 1 Score: 327.791 bits (839), Expect = 2.632e-106
Identity = 188/403 (46.65%), Postives = 259/403 (64.27%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKM 1604
            R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q +V+VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL+ L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCT                                  GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  ES  + K+
Sbjct:   85 RMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQALVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET---VHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSFLAKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT----------------------------------GRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESSEEVKL 450

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Match: eif4a3 (eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:103037591])

HSP 1 Score: 227.639 bits (579), Expect = 2.214e-68
Identity = 135/373 (36.19%), Postives = 213/373 (57.10%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD   L  D+L  +Y  G+E PS IQ  +I  II G +VIA++++GTGKT  + + ++  L       Q ++L PTRELA Q     + L  Y+  +      GGT+V +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +    +K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  +FR+G  R L+ TDV  RG+D+P+V+++ N+D P + E Y+HRIGR GR+G  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN-VQCHACIGGTNVGEDIRKLDYGQHVV---AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV 402

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Match: ddx6 (DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83])

HSP 1 Score: 394.43 bits (1012), Expect = 2.186e-132
Identity = 208/396 (52.53%), Postives = 279/396 (70.45%), Query Frame = 3

Query:  399 RIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNS-VQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLE 1583
            R++TSDV       F+D+ L R++LM ++E GWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  L      +Q + +VPTRELALQTS  CI L+K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ DI+  +   RQ++L+SAT+P +++ F+++++    +INLM ELTLKG+TQ+YAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVC+D+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GR+GHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA    E
Sbjct:   87 RVKTSDVTATKGNEFEDYCLKRELLMGIFEKGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDMKKPYIQALTIVPTRELALQTSQICIELSKHMGGVKVMATTGGTNLRDDILRLDET---VHVIIATPGRILDLINKGLAKVDAVQMIVLDEADKLLSQDFVQMLDDIIRAMPRNRQILLYSATFPLSVQKFMNRHLQKPYEINLMEELTLKGITQFYAYVNERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMKQEHRNRVFHDFRRGECRNLVCSDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITYEDRFNLKGIEEQLGTEIKPIPGTIDKSLYVAEFHSE 479

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000216.1 (pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-1 gene:ENSPMAG00000000186.1 transcript:ENSPMAT00000000216.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 183.726 bits (465), Expect = 1.909e-52
Identity = 123/389 (31.62%), Postives = 209/389 (53.73%), Query Frame = 3

Query:  477 ALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQ-IKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNEL-TLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLTTKDYD 1634
            A  ++GW+ P+ IQ  +IP  + G+++I  A+ G+GKTGA+A+ I+  L      +  +VL PTRELA Q S +   L   + GI   V  GG D+      L   A+    ++ATPGR +D + N +    + +KY V+DEAD++++ DF++ +  IL  +  +R+  LFSAT  + ++      +    K ++  +  T++ + QYY ++  + K   L  +L  L  +  IIFCST    + +A  + N+G++    H +M Q  R      F+      L+ TDV +RG+DIP V+VV NFD P H++ Y+HR+GR  R G  G +I  +++ D++ F  IE  +  K+ A P + ++ + +     E   + +  A +  K+ D
Sbjct:    9 ACEQLGWKQPTKIQVEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLDAPQRLFALVLTPTRELAFQISEQFEALGSSI-GIKSAVVVGGIDMMSQSLAL---AKKPHVIIATPGRLVDHLENTKGFNIRALKYLVMDEADRILNMDFETEVDKILKVIPKERKTYLFSATMTKKVQKLQRAALKEPVKCSVSTKYQTVEKLQQYYVFIPAKFKDSYLVYILNELAGNSFIIFCSTCNNTQRIALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKGKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVSQYDVELFQRIEHLIGKKLPAFPTNEEEVMMLT----ERVSEAQRFARMEMKETD 389

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Match: ddx39aa (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275])

HSP 1 Score: 175.637 bits (444), Expect = 1.918e-49
Identity = 134/425 (31.53%), Postives = 222/425 (52.24%), Query Frame = 3

Query:  306 NCKNNILTPKDSNQALLFKKVQCETRSILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMIL---FSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLIT-KRDLKYFFEIEQQLACKIVAIPKDIDKRLYV 1565
            + +N +L  +D  + ++  +    T + +K  ++ S V   S+  F DF L  ++L A+ + G+E PS +Q   IP  I G +V+ +AK+G GKT  + +  +  L  T   V  +V+  TRELA Q S E    +KY+  + + V  GG  +  D   L  +   +  +V TPGR L    N  +  K +K+F+LDE DK++     +  ++ L H+ S  Q++L   F+        S    Y P+   ++   +LTL G+ QYY  LK+ +K   L  LL  LE +Q +IF  ++ R   LA+ +I   +     H  M Q+ R   +  F+    R LV T++  RG+DI RVN+VFN+D P+ ++TYLHR+ R GRFG  G+A+  ++ + D K   +++ +    +  +P +ID   Y+
Sbjct:    5 DVENELLDYEDDEENVVAAEA---TEAPVKKEVKGSYVSIHSS-GFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPTDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEEVLKKNCPHI--VVGTPGR-LALSRNKTLNLKHVKHFILDECDKMLEQLVTASEVEQLLHI-SPHQLLLDACFADLTVVLCCSSWQCYPPMEVFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLIEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVSELPDEIDLSSYI 421

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Match: ddx46 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:NCBI gene;Acc:321948])

HSP 1 Score: 159.844 bits (403), Expect = 1.413e-41
Identity = 104/368 (28.26%), Postives = 184/368 (50.00%), Query Frame = 3

Query:  546 GENVIARAKNGTGKTGAYAIGIINNLTTSNSVQ------CIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIK---YFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQA-IIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLAS 1613
            G ++I  AK G+GKT  + + +  ++     ++       +++ PTRELALQ + EC    K L  + ++   GGT +++ I  L   A+    +V TPGR +D +  N  +  + +   Y VLDEAD++    F+  ++ I+      RQ ++FSAT+P  +++   + +  P+  ++   + +    V Q+   ++E+ K   L  LL   +   A I+F       + L K ++   Y C   H  +DQ  R+ +  DF++G  R +V T V  RG+D+  + +V N+D P H E Y+HR+GR GR G+ G +   IT    +Y  +I + L      +P D++ RL+    + +    + M  S
Sbjct:  406 GRDLIGIAKTGSGKTIGFLLPMFRHVMDQRPLEEGEGPIGVIMTPTRELALQIAKECRKFTKQL-ALRVVCVYGGTGISEQIAELKRGAE---IIVCTPGRMIDMLAANSGRVTNFRRATYMVLDEADRMFDMGFEPQVMRIIETSRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRS-VVCSDVEQHVIVIEEDTKFYKLLELLGLYQEKGAVIVFVDKQEHADTLLKDLMKASYPCLSLHGGIDQYDRDSIINDFKSGVCRLMVATSVAARGLDVKHLIMVVNYDCPNHYEDYVHRVGRTGRAGNKGYSYTFITSEQERYSGDIIKALELSGTPLPPDLE-RLWTEFREKQKAEGKTMRKS 767

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Match: DDX54 (DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084])

HSP 1 Score: 152.525 bits (384), Expect = 3.540e-41
Identity = 108/381 (28.35%), Postives = 193/381 (50.66%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNV------SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL---TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVH-QAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEI 1502
            + + T ++++Q N        F    L+  +   +   G++ P+PIQ   IP I++G +V+A A+ G+GKT A+ + +   L   +     + +VL PTRELALQTS     L K+  G+   +  GG  + D    L+ +      ++ TPGR +  +    +K + ++Y V DEAD+L    F   + +I+  L   RQ +LFSAT P+ L  F    +  P+  ++++ ++L+ +    +     +++    L +L   ++ H Q ++F +T   VE L + +   G SC Y ++ +DQ  R      F       L+ TDV  RGID P ++ V N++FP   + ++HR+GR  R G  G A +L+   ++ +  ++
Sbjct:   14 TELNTRELVKQQNCKKKKSGGFQSMGLSYPVFKGVMGKGYKVPTPIQRKCIPVILEGRDVVAMARTGSGKTAAFLVPMFERLHARSAQAGARALVLSPTRELALQTSKFTKELGKH-TGLKTALILGGDRMEDQFAALHENPD---IIIGTPGRLMHVVVEMNLKLQAMEYVVFDEADRLFEMGFAEQLTEIIRRLPDSRQTLLFSATLPKQLVEFARAGLSDPVLIRLDVDSKLSDQLKLAFMCSRADDKPCVLLHLLRTVVKPHEQTVVFVATKHHVEYLRELVSQAGMSCAYIYSALDQTERKINVGKFVHKKTMLLIVTDVAARGID-PMLDNVINYNFPGKPKLFIHRVGRVARAGRSGTAYSLVAPDEMPFVIDL 389

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Match: DHH1 (Cytoplasmic DEAD-box helicase, stimulates mRNA decapping; coordinates distinct steps in mRNA function and decay, interacting with both decapping and deadenylase complexes; role in translational repression, mRNA decay, and possibly mRNA export; interacts and cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body (PB) assembly, while ATPase stimulation by Not1p promotes PB disassembly; forms cytoplasmic foci on replication stress [Source:SGD;Acc:S000002319])

HSP 1 Score: 391.734 bits (1005), Expect = 2.611e-131
Identity = 214/393 (54.45%), Postives = 277/393 (70.48%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVAS 1571
            +R QT DVL     +F+DF L R++LM ++E G+E PSPIQ  +IP  I G +++ARAKNGTGKT A+ I  +  +    N +Q +++VPTRELALQTS     L K+  GI+ MV+TGGT++ DDI RLN +   V  LV TPGR LD  +       D   F++DEADK++S DFK+II  IL+ L    Q +LFSAT+P  +K F+ K++    +INLM ELTLKG+TQYYA+++E QKL CL  L   L+++QAIIFC++  RVELLAK I ++GYSCYY+HA+M Q+ RN+VF +FR G VR LVC+D++TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLI   D    ++IEQ+L  +I AIP  IDK LYVA 
Sbjct:   33 TRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLNET---VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVAE 421

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Match: FAL1 (Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3 [Source:SGD;Acc:S000002428])

HSP 1 Score: 234.187 bits (596), Expect = 8.349e-72
Identity = 146/387 (37.73%), Postives = 227/387 (58.66%), Query Frame = 3

Query:  393 KSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSN--DFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIP 1538
            K + +TS  L+ S+ +F+   L  D+L  +Y  G+E PS IQ+ +I  II G++VIA+A++GTGKT  + IG++  +      +Q ++L PTRELA Q      NL  Y+  +N    TGG  + DD+ ++       Q +  TPGR LD I    ++T++++  VLDEAD+L+S    FK  I DI A L    Q+++ SAT  +++     K+M    KI +  +E++L+G+ QY   + +E+        +  +L + Q +IFC+T  +V+ L++ +I   ++    H  M Q+ R++V  DFR GH R L+ TDV  RGID+ +V++V N+D P+  E Y+HRIGR GRFG  G+AIN ITK DL    EIE+  + KI  +P
Sbjct:   10 KLKFKTSKKLKVSS-TFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHG--CQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMP 392

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Match: TIF1 (Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF1 has a paralog, TIF2, that arose from the whole genome duplication [Source:SGD;Acc:S000001767])

HSP 1 Score: 207.994 bits (528), Expect = 4.886e-62
Identity = 145/390 (37.18%), Postives = 233/390 (59.74%), Query Frame = 3

Query:  387 ILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLM-NELTLKGVTQYYAYXXXXXXXXX-XXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            I +S+IQT+    +    FDD +L+ ++L  ++  G+E PS IQ  +I  II+G +V+A+A++GTGKTG ++I  +  + TS  + Q ++L PTRELALQ     + LA ++  I +    GGT   +D   L ++    Q +V TPGR  D I   + +T  IK F+LDEAD+++S+ FK  I  I   L    Q++L SAT P ++     K+M    +I +  +ELTL+G+ Q+Y  ++EE+     L  L  ++ V QA+IFC+T  +VE L   + N  ++    ++ + Q+ R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +T  D+    E+E+  + +I  +P DI
Sbjct:    8 IEESQIQTN--YDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMD-IKVHACIGGTSFVEDAEGLRDA----QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDI 390

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Match: TIF2 (Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF2 has a paralog, TIF1, that arose from the whole genome duplication [Source:SGD;Acc:S000003674])

HSP 1 Score: 207.994 bits (528), Expect = 4.886e-62
Identity = 145/390 (37.18%), Postives = 233/390 (59.74%), Query Frame = 3

Query:  387 ILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLM-NELTLKGVTQYYAYXXXXXXXXX-XXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            I +S+IQT+    +    FDD +L+ ++L  ++  G+E PS IQ  +I  II+G +V+A+A++GTGKTG ++I  +  + TS  + Q ++L PTRELALQ     + LA ++  I +    GGT   +D   L ++    Q +V TPGR  D I   + +T  IK F+LDEAD+++S+ FK  I  I   L    Q++L SAT P ++     K+M    +I +  +ELTL+G+ Q+Y  ++EE+     L  L  ++ V QA+IFC+T  +VE L   + N  ++    ++ + Q+ R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +T  D+    E+E+  + +I  +P DI
Sbjct:    8 IEESQIQTN--YDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMD-IKVHACIGGTSFVEDAEGLRDA----QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDI 390

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Match: SUB2 (Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000002242])

HSP 1 Score: 181.8 bits (460), Expect = 9.685e-52
Identity = 126/384 (32.81%), Postives = 199/384 (51.82%), Query Frame = 3

Query:  432 NVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSN-DFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLI-TKRDLKYFFEIEQQLACKIVAIPKD-IDKRLYV 1565
            +  F DF L  ++  A+ + G+E PS +Q  +IP  I G +V+ +AK+G GKT  + +  +  L      V  +V+   RELA Q  NE +  +KY+  +   V  GGT ++ D   L N       +VATPGR    +    I    +K FV+DE DK++   D +  + +I       +Q+++FSAT  + ++    +++  PL   ++   +LTL G+ QYY  L+E +K   L  LL +LE +Q IIF  +  R   L K +    +     H  M Q+ R   +  F+    R  V TDV  RGIDI R+N+  N+D     + YLHR+GR GRFG  G+AI+ + +K D +   +I+++   KI   P++ ID   Y+
Sbjct:   61 STGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGIDPSTYL 444

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Match: EDO39940 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8H2])

HSP 1 Score: 392.504 bits (1007), Expect = 2.896e-132
Identity = 212/403 (52.61%), Postives = 288/403 (71.46%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEK 1601
            +R +TSDV       F+D+ L R++LM ++E G++ PSPIQ  SIP  + G +++ARAKNGTGKT AY + ++    TT N +Q +VLVPTRELALQTS  CI L K++ G  +MV+TGGT + DDI RL N    V  +VATPGR LD +          +  V+DEADKL+S DFK ++  I+ HL   RQ++LFSAT+P +++ F +K++    +INLM+ELTL GVTQYYA+++E+QK+ CL  L + L+++Q+IIFC+++ RVELLA+ I+ +G+SC+Y HA+M Q  RN+VF DFR GH RNLVC+D+ TRGIDI  VNVV NFDFPK++ETYLHRIGR GRFGHLG+AINLIT  D    ++IE +L  +I  IP  IDK++YVA  Q +   DE+
Sbjct:   34 NRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNK---VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENELDTEIKPIPSVIDKKVYVAEFQQQQPDDEE 432

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Match: EDO48460 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIU5])

HSP 1 Score: 235.343 bits (599), Expect = 8.807e-72
Identity = 140/373 (37.53%), Postives = 214/373 (57.37%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYY-AYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            +FD  KL  D+L  +Y  G+E PS IQ  +I  I+ G +VIA+A++GTGKT  ++I ++  + T     Q +VL PTRELA Q     + L  Y+  +      GGT++ +DI +L+     V     TPGR  D I    ++T+ IK  VLDEAD++++  FK  I D+  +L    Q++L SAT P  +     K+M    +I +  +ELTL+G+ Q++ A  +EE K   L  L   L + QA+IFC+T  +V+ L + +    ++    H  M QK R  +  DFRAG  R L+ TDV  RG+D+ +V++V N+D P + E Y+HRIGR GRFG  G+AIN +   D++   +IEQ  + +I  +P ++
Sbjct:   35 TFDAMKLREDLLRGIYAYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDIRKLDYGQHIVS---GTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNV 403

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Match: EDO45225 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTJ5])

HSP 1 Score: 205.297 bits (521), Expect = 2.391e-60
Identity = 139/379 (36.68%), Postives = 214/379 (56.46%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-------NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINL-MNELTLKGVTQYYAYXXXXXXXXXXX-XXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDI 1547
            SFDD  L   +L  +Y  G+E PS IQ  +I       +VIA+A++GTGKT  +AI I+  + T+       +  Q +VL PTRELA Q     + L  Y+  +      GGT+V +D  +L    + V  +V TPGR  D I    + T+DIK FVLDEAD+++S  FK  I D+   L +  Q++L SAT P ++    +K+M    +I +   E+TL+G+ Q++  +++E         L + L + QA+IF +T  +V+ LA  +    ++    H  M QK R+ +  +FR+G  R L+ TD++ RGID+ +V++V N+D P + E Y+HRIGR GRFG  G AIN +T  D++   +IEQ    KI  +P ++
Sbjct:   34 SFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH-VKCHACIGGTNVREDRMKLE---EGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLEGIKQFFVLVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHRIGRGGRFGRKGAAINFVTNDDVRMLKDIEQYYNTKIEEMPMNV 408

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Match: EDO46214 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQR7])

HSP 1 Score: 198.364 bits (503), Expect = 5.844e-58
Identity = 132/395 (33.42%), Postives = 216/395 (54.68%), Query Frame = 3

Query:  390 LKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYA-IGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYA--------YXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITK-RDLKYFFEIEQQLACKIVAIP 1538
            +  R +T+DVL +  + F    L+  +L  L E G+E PSPIQ  +IP    G ++IA+AK+GTGKT  ++ I + N +T SN +Q I+L PTRE+A+Q  +    +  +  G+   V  GG  + +D      + +     V TPGR    I    +KT+ ++ F+LDEADKL+   F+  I  I + L   +QM+ FSATYPE L + + KYM  P   ++N  +  +L+G+ Q+Y+        +   ++K+  L  LL ++  +Q ++F +  +R + L+ ++   G+   +      Q  R +     ++ H R L+ TD+  RGID   VN+V N D P + ETYLHRIGR GRFG  G+A+  +   ++ +   +IE+ +  K+  +P
Sbjct:    6 ISQRKRTTDVLIEEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEED----KKALKSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFVRLNAADP-SLQGIKQFYSLVRFHPLPHKTFQEKVDGLIKLLSSVNFNQCLVFSNYQIRAKSLSDTLCRKGWPSTFIAGYQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGRFGTEGMAVTYVANGKEERELRDIERSIDVKMELLP 395

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BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Match: EDO43394 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYW1])

HSP 1 Score: 193.741 bits (491), Expect = 8.875e-56
Identity = 127/376 (33.78%), Postives = 202/376 (53.72%), Query Frame = 3

Query:  438 SFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSN-DFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYM--PLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLIT-KRDLKYFFEIEQQLACKIVAIPKDID 1550
             F DF L  ++L A+ + G+E PS +Q   IP  I G ++I +AK+G GKT  + +  +  L      V  +V+  TRELA Q   E     KY+  I I V  GG ++  D   L  +   +  +V TPGR L       +  K  K+F+LDE DK++   D +  + ++      ++Q+++FSAT P+ ++S   K+M  P+   ++   +LTL G+ QYY  LK+ +K   L  LL  LE +Q IIF  ++ R   L+  ++   +     H  M Q+ R   +  F+    R LV T++  RG+DI RVN+VFN+D P+ ++TYLHR+ R GRFG  G+AI  ++ + D K   E++ +    +  +P +ID
Sbjct:   48 GFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHI--VVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQLDMRRDVQEVFRMTPHEKQVMMFSATLPKEIRSVCKKFMQDPMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVGELPDEID 421

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:101169303])

HSP 1 Score: 393.275 bits (1009), Expect = 2.442e-131
Identity = 212/398 (53.27%), Postives = 281/398 (70.60%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNL-TTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLES 1586
            +RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q + +VPTRELALQ S  CI ++K++ G+ +M +TGGT++ DDI RL+ +   V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL  L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  E 
Sbjct:   79 TRIKTSDVTATKGNEFEDYCLKRELLMGIFEMGWERPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDCIQALGIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET---VHVVIATPGRILDLIKKGVAKVNQVQMIVLDEADKLLSQDFVVMMEEILGFLPKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSEG 473

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Match: ENSORLT00000028513.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:101166148])

HSP 1 Score: 391.734 bits (1005), Expect = 9.408e-131
Identity = 210/395 (53.16%), Postives = 280/395 (70.89%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQ 1577
            +R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q IV+VPTRELALQ S   I ++K++ G+ +M +TGGT++ DDI RL+   + V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L   RQ++L+SAT+P +++ F+ K++    +INLM ELTLKG+TQ+YAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL   I  IP  IDK LYVA + 
Sbjct:   76 NRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQISIQISKHMGGVKVMATTGGTNLRDDIMRLD---EIVHVVIATPGRILDLIKKGVAKVDRVQMIVMDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPMSVQKFMAKHLQKPYEINLMEELTLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKAIEEQLVTDIKPIPSSIDKSLYVAEYH 467

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Match: ENSORLT00000045064.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:101166148])

HSP 1 Score: 391.734 bits (1005), Expect = 9.408e-131
Identity = 210/395 (53.16%), Postives = 280/395 (70.89%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLT-TSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQ 1577
            +R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++  +    + +Q IV+VPTRELALQ S   I ++K++ G+ +M +TGGT++ DDI RL+   + V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L   RQ++L+SAT+P +++ F+ K++    +INLM ELTLKG+TQ+YAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL   I  IP  IDK LYVA + 
Sbjct:   76 NRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQISIQISKHMGGVKVMATTGGTNLRDDIMRLD---EIVHVVIATPGRILDLIKKGVAKVDRVQMIVMDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPMSVQKFMAKHLQKPYEINLMEELTLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKAIEEQLVTDIKPIPSSIDKSLYVAEYH 467

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Match: ddx6 (DEAD-box helicase 6 [Source:NCBI gene;Acc:101169303])

HSP 1 Score: 323.553 bits (828), Expect = 5.943e-105
Identity = 191/397 (48.11%), Postives = 245/397 (61.71%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLES 1586
            +RI+TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY                  L+P  E  +    +CI                                 V  ++ATPGR LD I     K   ++  VLDEADKL+S DF  ++ +IL  L  +RQ++L+SAT+P +++ F++ ++    +INLM ELTLKGVTQYYAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK  ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL  +I  IP  IDK LYVA +  E 
Sbjct:   79 TRIKTSDVTATKGNEFEDYCLKRELLMGIFEMGWERPSPIQEESIPIALSGRDILARAKNGTGKSGAY------------------LIPLLE-RIDLKRDCIQ--------------------------------VHVVIATPGRILDLIKKGVAKVNQVQMIVLDEADKLLSQDFVVMMEEILGFLPKQRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSEG 424

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Match: ENSORLT00000011518.2 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:101166148])

HSP 1 Score: 321.627 bits (823), Expect = 4.839e-104
Identity = 189/395 (47.85%), Postives = 247/395 (62.53%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAK-YLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQ 1577
            +R++TSDV       F+D+ L R++LM ++EMGWE PSPIQ  SIP  + G +++ARAKNGTGK+GAY I ++                          E I+L K ++Q                          V  ++ATPGR LD I     K   ++  V+DEADKL+S DF  +I DI++ L   RQ++L+SAT+P +++ F+ K++    +INLM ELTLKG+TQ+YAY+ E QK+ CL  L   L+++Q+IIFC++  RVELLAK I  +GYSC+Y HAKM Q+ RN+VF DFR G  RNLVCTD+ TRGIDI  VNVV NFDFPK+ ETYLHRIGR GRFGHLG+AINLIT  D      IE+QL   I  IP  IDK LYVA + 
Sbjct:   76 NRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL--------------------------ERIDLKKDHIQ--------------------------VHVVIATPGRILDLIKKGVAKVDRVQMIVMDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPMSVQKFMAKHLQKPYEINLMEELTLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKAIEEQLVTDIKPIPSSIDKSLYVAEYH 418

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Match: SMESG000001583.1 (SMESG000001583.1)

HSP 1 Score: 942.569 bits (2435), Expect = 0.000e+0
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 3

Query:  174 MICDQLVLPSSNDVDNVLMQESPDSIDVIQTKDDALETKDCLAMNCKNNILTPKDSNQALLFKKVQCETRSILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLTTKDYDISSLA 1649
            MICDQLVLPSSNDVDNVLMQESPDSIDVIQTKDDALETKDCLAMNCKNNILTPKDSNQALLFKKVQCETRSILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWPSPIQAISIPSIIDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYLKEEQKLCCLKILLKNLEVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLTTKDYDISSLA
Sbjct:    1 MICDQLVLPSSNDVDNVLMQESPDSIDVIQTKDDALETKDCLAMNCKNNILTPKDSNQALLFKKVQCETRSILKSRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWPSPIQAISIPSIIDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYLKEEQKLCCLKILLKNLEVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLASLTTKDYDISSLA 492

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Match: SMESG000027870.1 (SMESG000027870.1)

HSP 1 Score: 446.817 bits (1148), Expect = 7.337e-153
Identity = 237/402 (58.96%), Postives = 300/402 (74.63%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDE 1598
            +RI+T+DVL     +F+ + LNRD++ A++E GW+ PSPIQ   IP+ + G +++ARAKNGTGKTGAYA+ ++N +     +VQ ++LVPTRELALQTS  CI L+KYL+   +MV+TGGTD+T+DICRLN   +PV  ++ TPGR  D +    I  +  K  VLDEADKL+S DFK I+ +IL+ L   RQ++L+SATYP  L  F+ K++    KINLM ELTLKG+TQYYAY+KE+ K+ CL  L   L V+Q+IIFC+T  RVELLAK I ++GYSCYY HA+M Q  RN+VF DFRAGH RNLVCTD+ TRGIDIP VNVV NFD+PK+ ETYLHRIGR GR+GHLGIAINLIT  D     EIE QL  KI AIPKDIDKRLYV+ +Q+E+ FDE
Sbjct:   16 NRIKTNDVLATKGSTFESYHLNRDLMKAIFEKGWDMPSPIQEQGIPAAMSGNDILARAKNGTGKTGAYALPLLNKINPDLQAVQGLILVPTRELALQTSQICIELSKYLK-FKVMVTTGGTDLTEDICRLN---RPVHLVIGTPGRIQDLLKREVINGEYCKTLVLDEADKLLSKDFKEIMSNILSCLPKDRQILLYSATYPVTLHEFMMKHLRSPIKINLMEELTLKGITQYYAYVKEKHKVHCLNTLFSKLAVNQSIIFCNTTQRVELLAKKITDLGYSCYYIHARMSQHFRNRVFHDFRAGHCRNLVCTDLFTRGIDIPTVNVVINFDYPKYAETYLHRIGRSGRYGHLGIAINLITYDDRYALKEIESQLDTKIEAIPKDIDKRLYVSEYQIENNFDE 413

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Match: SMESG000073910.1 (SMESG000073910.1)

HSP 1 Score: 417.542 bits (1072), Expect = 1.355e-140
Identity = 228/404 (56.44%), Postives = 295/404 (73.02%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTS-NSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAINLITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKM 1604
            +RI+T DV      SFDDF L RDIL  +YE GWE PSPIQ  SIP  + G +++ARAKNGTGKTGAY+I ++  +  S N +Q I+LVPTRELALQTS  C  LAK+ +   IMV+TGGT + DDI RL    Q V  ++ATPGR  D I  + + T   K  V+DEADKL+S DF+ +I  I+  L ++RQ++L+SAT+P++++ F++K+M    +INLM+ELTLKG++QYYAY++E QK+ CL  L   L+++Q+IIFC+T  RVELLAK I ++GYSCYY HAKM+Q  RN+VF +FR G+ RNLVCTD+ TRGIDIP VNVV NFDFPK+ ETYLHRIGR GR+GHLG+A+NLIT  D      IE QL  +I AIPK IDKRLYVA +Q E+  D ++
Sbjct:   37 NRIKTVDVTATQGNSFDDFCLKRDILKGIYEKGWEMPSPIQEASIPISLIGRDILARAKNGTGKTGAYSIPLLEKIDPSINQIQGIILVPTRELALQTSQICTELAKHTE-TKIMVTTGGTSLKDDIVRLQ---QTVHIILATPGRVNDLIKRDIVSTNFCKILVIDEADKLLSADFEEVIDYIIGKLPAQRQIMLYSATFPQSVQQFLEKHMRDPYEINLMDELTLKGISQYYAYVQERQKVHCLNTLFSRLQINQSIIFCNTAQRVELLAKKITDLGYSCYYIHAKMNQVYRNRVFHEFRNGNCRNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRYGHLGVAVNLITYDDRFALKNIETQLNTEIKAIPKHIDKRLYVAEYQNENELDSRI 436

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Match: SMESG000073847.1 (SMESG000073847.1)

HSP 1 Score: 299.671 bits (766), Expect = 6.960e-96
Identity = 167/325 (51.38%), Postives = 225/325 (69.23%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVNV 1370
            +RI+T+DV    + SF+   +N +IL+A+ E  W  PSPIQ ISIP I++G+NV+AR+KNGTGKTGA+A+ ++N +    S+Q ++L PTRELALQT N C+ L+KYL  I IMVSTGGT++++D+ RL+ S   +  ++ TPGR LD +         +   +LDEADKL+S DF+  I DI+ +L ++ Q +LFSATYP NLKSF+ +Y+   +  N+MNEL LKGVTQ+YAYLKE Q               QAIIFC++  RVELL K +I  GYS YY H+KM Q++RN+VF DFR G V  LVCTD+MTRGID+  VNV
Sbjct:   99 NRIRTTDVKPSPDASFESLNINSNILLAMTENQWHCPSPIQEISIPKIMEGKNVVARSKNGTGKTGAFAVSMLNTIDPKKSLQVLILTPTRELALQTGNVCLTLSKYLNNIKIMVSTGGTNLSEDLYRLSKS---INIIIGTPGRILDLLIYRFDSFAHVNILILDEADKLLSLDFQPFIEDIITNLPNRCQKVLFSATYPVNLKSFVKRYIVNCEYCNVMNELALKGVTQFYAYLKENQ--------------KQAIIFCNSSKRVELLVKFVIEAGYSSYYIHSKMSQEARNRVFHDFRCGFVTFLVCTDIMTRGIDVSNVNV 406

[Close]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Match: SMESG000073847.1 (SMESG000073847.1)

HSP 1 Score: 298.13 bits (762), Expect = 2.660e-95
Identity = 166/324 (51.23%), Postives = 224/324 (69.14%), Query Frame = 3

Query:  396 SRIQTSDVLQQSNVSFDDFKLNRDILMALYEMGWEWXXXXXXXXXXXXXDGENVIARAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAKYLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIKTKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKSFIDKYMPLSKKINLMNELTLKGVTQYYAYXXXXXXXXXXXXXXXXXXVHQAIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVRNLVCTDVMTRGIDIPRVN 1367
            +RI+T+DV    + SF+   +N +IL+A+ E  W  PSPIQ ISIP I++G+NV+AR+KNGTGKTGA+A+ ++N +    S+Q ++L PTRELALQT N C+ L+KYL  I IMVSTGGT++++D+ RL+ S   +  ++ TPGR LD +         +   +LDEADKL+S DF+  I DI+ +L ++ Q +LFSATYP NLKSF+ +Y+   +  N+MNEL LKGVTQ+YAYLKE Q               QAIIFC++  RVELL K +I  GYS YY H+KM Q++RN+VF DFR G V  LVCTD+MTRGID+  VN
Sbjct:   99 NRIRTTDVKPSPDASFESLNINSNILLAMTENQWHCPSPIQEISIPKIMEGKNVVARSKNGTGKTGAFAVSMLNTIDPKKSLQVLILTPTRELALQTGNVCLTLSKYLNNIKIMVSTGGTNLSEDLYRLSKS---INIIIGTPGRILDLLIYRFDSFAHVNILILDEADKLLSLDFQPFIEDIITNLPNRCQKVLFSATYPVNLKSFVKRYIVNCEYCNVMNELALKGVTQFYAYLKENQ--------------KQAIIFCNSSKRVELLVKFVIEAGYSSYYIHSKMSQEARNRVFHDFRCGFVTFLVCTDIMTRGIDVSNVN 405

The following BLAST results are available for this feature:

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Human
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Celegans
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Zebrafish
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
DDX6	3.165e-135	54.23	DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
DDX6	3.165e-135	54.23	DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
DDX6	3.165e-135	54.23	DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
EIF4A3	1.999e-69	36.46	eukaryotic translation initiation factor 4A3 [Sour...	[more]
EIF4A3	1.999e-69	36.46	eukaryotic translation initiation factor 4A3 [Sour...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cgh-1	2.757e-139	54.36	ATP-dependent RNA helicase cgh-1 [Source:UniProtK...	[more]
inf-1	3.281e-73	37.00	Eukaryotic initiation factor 4A [Source:UniProtKB...	[more]
inf-1	3.281e-73	37.00	Eukaryotic initiation factor 4A [Source:UniProtKB...	[more]
inf-1	3.281e-73	37.00	Eukaryotic initiation factor 4A [Source:UniProtKB...	[more]
Y65B4A.6	1.858e-72	37.53	pep chromosome:WBcel235:I:629492:636350:-1 gene:WB...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
me31B	5.202e-128	53.69	gene:FBgn0004419 transcript:FBtr0079976	[more]
me31B	1.426e-127	53.69	gene:FBgn0004419 transcript:FBtr0079975	[more]
CG7483	1.654e-69	37.53	gene:FBgn0037573 transcript:FBtr0081834	[more]
eIF4A	3.787e-57	37.43	gene:FBgn0001942 transcript:FBtr0079178	[more]
eIF4A	3.787e-57	37.43	gene:FBgn0001942 transcript:FBtr0079175	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ddx6	5.217e-135	53.35	DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN...	[more]
ddx6	5.217e-135	53.35	DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN...	[more]
ddx61	1.685e-132	54.59	DEAD (Asp-Glu-Ala-Asp) box helicase 61 [Source:ZFI...	[more]
ddx61	1.685e-132	54.59	DEAD (Asp-Glu-Ala-Asp) box helicase 61 [Source:ZFI...	[more]
eif4a3	1.188e-67	36.19	eukaryotic translation initiation factor 4A3 [Sour...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ddx6	2.427e-130	54.78	DEAD-box helicase 6 [Source:NCBI gene;Acc:780039]	[more]
ddx6	3.086e-130	54.78	DEAD-box helicase 6 [Source:NCBI gene;Acc:780039]	[more]
ddx6	9.288e-122	52.20	DEAD-box helicase 6 [Source:NCBI gene;Acc:780039]	[more]
ddx6	2.442e-103	48.06	DEAD-box helicase 6 [Source:NCBI gene;Acc:780039]	[more]
ddx6	1.188e-102	49.22	DEAD-box helicase 6 [Source:NCBI gene;Acc:780039]	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Ddx6	1.147e-135	54.23	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:M...	[more]
Ddx6	1.147e-135	54.23	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:M...	[more]
Eif4a3	2.026e-69	36.19	eukaryotic translation initiation factor 4A3 [Sour...	[more]
Eif4a3l2	3.693e-69	35.09	eukaryotic translation initiation factor 4A3 like ...	[more]
Eif4a3l1	9.828e-69	36.19	eukaryotic translation initiation factor 4A3 like ...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q95YF3\|CGH1_CAEEL	3.507e-138	54.36	ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis...	[more]
sp\|Q5ZKB9\|DDX6_CHICK	6.325e-135	54.23	Probable ATP-dependent RNA helicase DDX6 OS=Gallus...	[more]
sp\|P54823\|DDX6_MOUSE	8.026e-135	54.23	Probable ATP-dependent RNA helicase DDX6 OS=Mus mu...	[more]
sp\|P26196\|DDX6_HUMAN	1.520e-134	54.23	Probable ATP-dependent RNA helicase DDX6 OS=Homo s...	[more]
sp\|Q9WTM2\|DDX6_CAVPO	5.695e-134	54.23	Probable ATP-dependent RNA helicase DDX6 (Fragment...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8IM45	9.704e-144	57.32	Uncharacterized protein OS=Macrostomum lignano OX=...	[more]
A0A0R3SDD6	1.048e-141	55.64	Uncharacterized protein OS=Hymenolepis diminuta OX...	[more]
A0A564Z4D3	2.305e-141	55.64	Uncharacterized protein OS=Hymenolepis diminuta OX...	[more]
A0A0R3TL87	3.457e-141	55.64	Uncharacterized protein OS=Rodentolepis nana OX=10...	[more]
A0A0R3W864	7.715e-141	55.64	Uncharacterized protein OS=Taenia asiatica OX=6051...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ddx6	1.695e-133	53.10	DEAD-box helicase 6 [Source:NCBI gene;Acc:10304611...	[more]
ENSAMXT00000045184.1	2.143e-133	54.04	probable ATP-dependent RNA helicase ddx6 [Source:N...	[more]
ddx61	4.112e-133	53.83	probable ATP-dependent RNA helicase DDX6 [Source:N...	[more]
ddx6	2.632e-106	46.65	DEAD-box helicase 6 [Source:NCBI gene;Acc:10304611...	[more]
eif4a3	2.214e-68	36.19	eukaryotic translation initiation factor 4A3 [Sour...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ddx6	2.186e-132	52.53	DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN...	[more]
ENSPMAT00000000216.1	1.909e-52	31.62	pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-...	[more]
ddx39aa	1.918e-49	31.53	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Sourc...	[more]
ddx46	1.413e-41	28.26	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:...	[more]
DDX54	3.540e-41	28.35	DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
DHH1	2.611e-131	54.45	Cytoplasmic DEAD-box helicase, stimulates mRNA dec...	[more]
FAL1	8.349e-72	37.73	Nucleolar protein required for maturation of 18S r...	[more]
TIF1	4.886e-62	37.18	Translation initiation factor eIF4A; DEA(D/H)-box ...	[more]
TIF2	4.886e-62	37.18	Translation initiation factor eIF4A; DEA(D/H)-box ...	[more]
SUB2	9.685e-52	32.81	Component of the TREX complex required for nuclear...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO39940	2.896e-132	52.61	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48460	8.807e-72	37.53	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45225	2.391e-60	36.68	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO46214	5.844e-58	33.42	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43394	8.875e-56	33.78	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ddx6	2.442e-131	53.27	DEAD-box helicase 6 [Source:NCBI gene;Acc:10116930...	[more]
ENSORLT00000028513.1	9.408e-131	53.16	probable ATP-dependent RNA helicase ddx6 [Source:N...	[more]
ENSORLT00000045064.1	9.408e-131	53.16	probable ATP-dependent RNA helicase ddx6 [Source:N...	[more]
ddx6	5.943e-105	48.11	DEAD-box helicase 6 [Source:NCBI gene;Acc:10116930...	[more]
ENSORLT00000011518.2	4.839e-104	47.85	probable ATP-dependent RNA helicase ddx6 [Source:N...	[more]

BLAST of ATP-dependent RNA helicase DHH1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000001583.1	0.000e+0	100.00	SMESG000001583.1	[more]
SMESG000027870.1	7.337e-153	58.96	SMESG000027870.1	[more]
SMESG000073910.1	1.355e-140	56.44	SMESG000073910.1	[more]
SMESG000073847.1	6.960e-96	51.38	SMESG000073847.1	[more]
SMESG000073847.1	2.660e-95	51.23	SMESG000073847.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30006692 ID=SMED30006692|Name=ATP-dependent RNA helicase DHH1|organism=Schmidtea mediterranea sexual|type=transcript|length=1732bp
GTTCGAAAGTATTTGAATTTTTAGGTTATTTTCAGTGAATCTTATTGGAC
TATGTTTCGATTAATTGCAAATGCAGTTGGTGTGTTTCAAAACATAAACC
AATTAAAAGCAAGATGTTGTACCACTTCTGTGCACACGAAATTAAATCAA
ATCAATTTTTTCTAACGATAACAATGATCTGTGATCAACTAGTACTACCA
TCTAGTAATGATGTTGACAACGTTCTCATGCAAGAAAGCCCAGATTCGAT
AGATGTTATTCAAACCAAAGATGATGCATTGGAAACGAAGGATTGTCTTG
CAATGAACTGTAAAAACAATATTCTGACACCAAAAGATTCCAATCAAGCT
CTTTTATTTAAAAAAGTACAATGTGAAACAAGGTCGATTTTAAAATCAAG
AATTCAAACATCTGATGTTCTTCAACAATCCAATGTCTCTTTTGATGATT
TCAAATTAAATAGAGATATTCTAATGGCACTATACGAAATGGGTTGGGAA
TGGCCATCACCTATTCAAGCTATTTCTATTCCGTCGATAATTGACGGTGA
AAACGTAATTGCTAGAGCAAAAAATGGAACTGGTAAAACAGGTGCATATG
CTATCGGCATCATAAATAATTTGACTACTTCAAATTCTGTCCAATGCATA
GTTTTGGTTCCTACAAGAGAACTTGCTTTACAAACATCAAATGAATGCAT
TAACCTAGCTAAATATTTACAGGGTATCAATATAATGGTATCCACTGGAG
GTACTGATGTAACAGATGATATTTGTAGACTAAATAATTCGGCACAACCC
GTTCAATTTTTAGTAGCAACTCCTGGGAGGGCATTAGATTTCATAACTAA
CAATCAAATTAAAACTAAGGATATAAAATATTTTGTTCTTGATGAAGCTG
ATAAATTAATGTCAAATGATTTTAAGTCTATTATTATTGATATTCTTGCT
CATCTAGATTCAAAAAGACAGATGATATTATTTTCAGCTACATATCCAGA
AAATTTGAAATCTTTTATCGATAAATATATGCCGCTATCAAAAAAGATTA
ATTTAATGAATGAATTAACATTGAAAGGAGTAACACAATATTATGCATAT
TTGAAAGAAGAACAGAAATTATGCTGCTTGAAGATTTTACTCAAAAATTT
AGAAGTTCATCAAGCTATTATTTTTTGTAGTACCATGCTGCGCGTCGAAT
TACTCGCTAAATCAATTATCAACATGGGTTATTCATGCTATTATACTCAC
GCAAAAATGGATCAGAAATCTAGAAATCAGGTTTTTGTTGATTTTAGAGC
TGGTCATGTCCGAAATTTGGTTTGCACTGATGTCATGACAAGAGGGATTG
ACATACCCAGAGTTAATGTGGTTTTTAATTTCGATTTTCCAAAACATACG
GAAACATATTTACACCGAATTGGCCGCTGCGGACGATTTGGTCATTTAGG
AATTGCCATCAATTTAATTACCAAGCGTGATTTGAAATATTTTTTTGAAA
TTGAACAACAACTTGCTTGTAAAATTGTTGCGATTCCTAAAGATATTGAC
AAACGACTTTATGTGGCATCTCATCAACTTGAAAGTTGCTTTGATGAAAA
AATGTTAGCGTCTTTAACTACAAAAGACTACGATATATCATCTTTGGCAT
AATTCAAATTCATCATGATTTAAAATTTTTGCAATATTGTATTTTTATTC
TATGAAATACAGCAGTTTTCATTCAAAAAAAA

protein sequence of SMED30006692-orf-1

>SMED30006692-orf-1 ID=SMED30006692-orf-1|Name=SMED30006692-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=513bp
MLYHFCAHEIKSNQFFLTITMICDQLVLPSSNDVDNVLMQESPDSIDVIQ
TKDDALETKDCLAMNCKNNILTPKDSNQALLFKKVQCETRSILKSRIQTS
DVLQQSNVSFDDFKLNRDILMALYEMGWEWPSPIQAISIPSIIDGENVIA
RAKNGTGKTGAYAIGIINNLTTSNSVQCIVLVPTRELALQTSNECINLAK
YLQGINIMVSTGGTDVTDDICRLNNSAQPVQFLVATPGRALDFITNNQIK
TKDIKYFVLDEADKLMSNDFKSIIIDILAHLDSKRQMILFSATYPENLKS
FIDKYMPLSKKINLMNELTLKGVTQYYAYLKEEQKLCCLKILLKNLEVHQ
AIIFCSTMLRVELLAKSIINMGYSCYYTHAKMDQKSRNQVFVDFRAGHVR
NLVCTDVMTRGIDIPRVNVVFNFDFPKHTETYLHRIGRCGRFGHLGIAIN
LITKRDLKYFFEIEQQLACKIVAIPKDIDKRLYVASHQLESCFDEKMLAS
LTTKDYDISSLA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003724	RNA helicase activity
GO:0005524	ATP binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003682	chromatin binding
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0004386	helicase activity
GO:0016787	hydrolase activity
GO:0090079	translation regulator activity, nucleic acid binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000136	whole organism
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase
IPR011545	DEAD/DEAH_box_helicase_dom
IPR000629	RNA-helicase_DEAD-box_CS
IPR014014	RNA_helicase_DEAD_Q_motif

Vocabulary: **biological process**
Term	Definition
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0006397	mRNA processing
GO:0006417	regulation of translation
GO:0006810	transport
GO:0010603	regulation of cytoplasmic mRNA processing body assembly
GO:0017148	negative regulation of translation
GO:0033962	cytoplasmic mRNA processing body assembly
GO:0034063	stress granule assembly
GO:0045900	negative regulation of translational elongation
GO:0051028	mRNA transport

Vocabulary: **cellular component**
Term	Definition
GO:0000932	P-body
GO:0005737	cytoplasm
GO:0010494	cytoplasmic stress granule
GO:0098562	cytoplasmic side of membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 362..443 e-value: 5.2E-26 score: 102.4
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 337..443 e-value: 3.8E-27 score: 94.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 322..482 score: 21.817
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 127..326 e-value: 3.7E-41 score: 152.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 139..312 score: 24.719
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 133..300 e-value: 5.1E-41 score: 140.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 318..490 e-value: 2.1E-49 score: 169.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 87..317 e-value: 3.3E-60 score: 205.0
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 93..458
None	No IPR available	PANTHER	PTHR24031:SF632	ATP-DEPENDENT RNA HELICASE DDX6-RELATED	coord: 93..458
None	No IPR available	CDD	cd17940	DEADc_DDX6	coord: 110..313 e-value: 1.04013E-86 score: 263.775
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 323..452 e-value: 1.40635E-50 score: 167.299
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 258..266
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 108..136 score: 10.465
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 175..465