E3 ubiquitin-protein ligase KCMF1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30006656 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Match: KCMF1 (potassium channel modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:20589]) HSP 1 Score: 156.762 bits (395), Expect = 1.092e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Match: KCMF1 (potassium channel modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:20589]) HSP 1 Score: 90.1225 bits (222), Expect = 1.365e-20 Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 215 MQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 MQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 1 MQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 87
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Match: RNF138 (ring finger protein 138 [Source:HGNC Symbol;Acc:HGNC:17765]) HSP 1 Score: 53.1434 bits (126), Expect = 1.168e-7 Identity = 28/94 (29.79%), Postives = 46/94 (48.94%), Query Frame = 2 Query: 287 SYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQ 568 ++ CP+C + T L DH N H + V CP+C SL G+ +Q T+N + HL+ +H +Y V + ++T+ T + S Q Sbjct: 62 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQF-------DYGEFVNLQLDEETQYQTAVEESFQ 148
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Match: KCMF1 (potassium channel modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:20589]) HSP 1 Score: 49.2914 bits (116), Expect = 2.289e-7 Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 2 Query: 215 MQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHL 349 MQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ Sbjct: 1 MQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHV 46
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Match: RNF138 (ring finger protein 138 [Source:HGNC Symbol;Acc:HGNC:17765]) HSP 1 Score: 52.7582 bits (125), Expect = 5.988e-7 Identity = 28/94 (29.79%), Postives = 46/94 (48.94%), Query Frame = 2 Query: 287 SYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQ 568 ++ CP+C + T L DH N H + V CP+C SL G+ +Q T+N + HL+ +H +Y V + ++T+ T + S Q Sbjct: 156 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQF-------DYGEFVNLQLDEETQYQTAVEESFQ 242
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Celegans
Match: ZK652.6 (pep chromosome:WBcel235:III:7829411:7832503:1 gene:WBGene00022785.1 transcript:ZK652.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZK652.6) HSP 1 Score: 86.2705 bits (212), Expect = 1.634e-17 Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 2 Query: 71 HEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNN--------HHSDHPMQCLLTKYDYGTFYAGE----VQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNS-NIEVICPVCASLSDGN--ANQQTKNLIYHLSTKH 466 HEG+SCD C + F+ RYKCL C DYDLC CF K + H HPMQ +L+ D+ Y G+ S+TCP C G T H+ +H + VICP+C ++ +++T+NL H + H Sbjct: 9 HEGVSCDGCAFTAFAGNRYKCLRCSDYDLCFSCFTTKNYGDQQTIADIPIHDESHPMQLILSSVDFDLVYQGDPTRHYDERKIVSFTCPYCNITGLTERQFGTHVLSQHPEAPGYSVICPLCIGNTEMEHIQSKETENLSVHWTEIH 155
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Match: Kcmf1 (gene:FBgn0037655 transcript:FBtr0300747) HSP 1 Score: 147.517 bits (371), Expect = 2.636e-37 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C KS F+ RRYKCL+C+DYDLC C++ S H +HPMQC+LT+ D ++ GE+ +D S+TCP C K+G + TL +H++ EH+ +++EV+CPVCA L G N T + HL+ +H Sbjct: 3 RHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Match: Kcmf1 (gene:FBgn0037655 transcript:FBtr0300743) HSP 1 Score: 147.517 bits (371), Expect = 2.636e-37 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C KS F+ RRYKCL+C+DYDLC C++ S H +HPMQC+LT+ D ++ GE+ +D S+TCP C K+G + TL +H++ EH+ +++EV+CPVCA L G N T + HL+ +H Sbjct: 3 RHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Match: Kcmf1 (gene:FBgn0037655 transcript:FBtr0300748) HSP 1 Score: 147.517 bits (371), Expect = 2.636e-37 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C KS F+ RRYKCL+C+DYDLC C++ S H +HPMQC+LT+ D ++ GE+ +D S+TCP C K+G + TL +H++ EH+ +++EV+CPVCA L G N T + HL+ +H Sbjct: 3 RHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Match: Kcmf1 (gene:FBgn0037655 transcript:FBtr0300744) HSP 1 Score: 147.517 bits (371), Expect = 2.636e-37 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C KS F+ RRYKCL+C+DYDLC C++ S H +HPMQC+LT+ D ++ GE+ +D S+TCP C K+G + TL +H++ EH+ +++EV+CPVCA L G N T + HL+ +H Sbjct: 3 RHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Match: Kcmf1 (gene:FBgn0037655 transcript:FBtr0300745) HSP 1 Score: 147.517 bits (371), Expect = 2.636e-37 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C KS F+ RRYKCL+C+DYDLC C++ S H +HPMQC+LT+ D ++ GE+ +D S+TCP C K+G + TL +H++ EH+ +++EV+CPVCA L G N T + HL+ +H Sbjct: 3 RHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Zebrafish
Match: kcmf1 (potassium channel modulatory factor 1 [Source:NCBI gene;Acc:393927]) HSP 1 Score: 154.836 bits (390), Expect = 4.739e-41 Identity = 61/136 (44.85%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H ++HPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Xenopus
Match: ube2k (ubiquitin conjugating enzyme E2 K [Source:Xenbase;Acc:XB-GENE-983372]) HSP 1 Score: 156.762 bits (395), Expect = 1.138e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Xenopus
Match: ube2k (ubiquitin conjugating enzyme E2 K [Source:Xenbase;Acc:XB-GENE-983372]) HSP 1 Score: 145.206 bits (365), Expect = 1.891e-37 Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 59 MNKKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 M KH CD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 1 MISKHLA-DCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Xenopus
Match: rnf138 (ring finger protein 138 [Source:NCBI gene;Acc:549183]) HSP 1 Score: 53.5286 bits (127), Expect = 2.405e-7 Identity = 22/59 (37.29%), Postives = 36/59 (61.02%), Query Frame = 2 Query: 290 YTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 Y CP+C + + +L +H N H +E++CP+CA+L G+ Q T N+I HL+ +H Sbjct: 134 YKCPLCSEQNLSQRSLLEHCNNVHYYQEVEMVCPICATLPWGDPIQTTGNIIAHLNARH 192
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Match: Kcmf1 (potassium channel modulatory factor 1 [Source:MGI Symbol;Acc:MGI:1921537]) HSP 1 Score: 155.221 bits (391), Expect = 3.105e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Match: Kcmf1 (potassium channel modulatory factor 1 [Source:MGI Symbol;Acc:MGI:1921537]) HSP 1 Score: 121.709 bits (304), Expect = 2.429e-32 Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVI 385 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EV+ Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVV 109
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Match: Kcmf1 (potassium channel modulatory factor 1 [Source:MGI Symbol;Acc:MGI:1921537]) HSP 1 Score: 92.0485 bits (227), Expect = 8.704e-20 Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 215 MQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 MQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 1 MQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 87
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Match: Rnf138 (ring finger protein 138 [Source:MGI Symbol;Acc:MGI:1929211]) HSP 1 Score: 52.7582 bits (125), Expect = 4.074e-7 Identity = 28/94 (29.79%), Postives = 46/94 (48.94%), Query Frame = 2 Query: 287 SYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQ 568 ++ CP+C + T L DH N H + V CP+C SL G+ +Q T+N + HL+ +H +Y V + ++T+ T + S Q Sbjct: 156 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQF-------DYGEFVNLQLDEETQYQTAVEESFQ 242
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Match: Rnf138 (ring finger protein 138 [Source:MGI Symbol;Acc:MGI:1929211]) HSP 1 Score: 52.7582 bits (125), Expect = 4.074e-7 Identity = 28/94 (29.79%), Postives = 46/94 (48.94%), Query Frame = 2 Query: 287 SYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQ 568 ++ CP+C + T L DH N H + V CP+C SL G+ +Q T+N + HL+ +H +Y V + ++T+ T + S Q Sbjct: 156 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQF-------DYGEFVNLQLDEETQYQTAVEESFQ 242
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Match: sp|Q9P0J7|KCMF1_HUMAN (E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens OX=9606 GN=KCMF1 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 5.245e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Match: sp|Q6GPB6|KCMF1_XENLA (E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis OX=8355 GN=kcmf1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.028e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Match: sp|Q1LZE1|KCMF1_BOVIN (E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus OX=9913 GN=KCMF1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.860e-41 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Match: sp|Q80UY2|KCMF1_MOUSE (E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus OX=10090 GN=Kcmf1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.172e-40 Identity = 62/136 (45.59%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H +DHPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Match: sp|Q7T321|KCMF1_DANRE (E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio OX=7955 GN=kcmf1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.577e-40 Identity = 61/136 (44.85%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H ++HPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Match: A0A1Z5LG59 (Uncharacterized protein (Fragment) OS=Ornithodoros moubata OX=6938 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.914e-41 Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGE-VQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K+ F +RYKCL+C+DYDLCG C++ + H DHPMQC+LT+ D+ +Y GE V + S+TCPICGK+G T TL++H+ EH+++++EV+CPVCASL G N T++ HLS +H S Sbjct: 3 RHEGVSCDSCLKANFRGKRYKCLICYDYDLCGTCYEAGATNTRHTPDHPMQCILTRSDFDLYYGGEAVSVEQPQSFTCPICGKMGFTEATLQEHVTSEHTDTSLEVVCPVCASLPGGEPNHVTEDFAAHLSLEHRS 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Match: A0A1D2NDM3 (E3 ubiquitin-protein ligase KCMF1 OS=Orchesella cincta OX=48709 GN=Ocin01_03357 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 8.217e-41 Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKV---TRRFSKQTR 538 +HEG+SCD C KS F RRYKCL C+DYDLC C++ ++ H SDHP+QC+L++ DY +Y+GE T+LA S TCPICG+LG T L+ H+ EH NSN EV+CP+CAS+ G N T + HL+ +H E +P RR + +R Sbjct: 3 RHEGVSCDACLKSNFKGRRYKCLRCYDYDLCANCYEGGAATSRHTSDHPVQCILSRGDYDLYYSGESSTELAHSLTCPICGRLGFTESELQSHVTSEHQNSNTEVVCPICASMPGGEPNLVTDDFTAHLTLEHRQQPRDNYVEEAPSARHSLRRVQQPSR 162
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Match: A0A2R5L5J1 (Putative potassium channel modulatory factor 1 protein (Fragment) OS=Ornithodoros turicata OX=34597 PE=4 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.932e-40 Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGE-VQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K+ F +RYKCL+C+DYDLC C++ + H DHPMQC+LT+ D+ +Y GE V + S+TCPICGK+G T TL++H+ EH++++ EV+CPVCA+L G N T++ HLS +H S Sbjct: 6 RHEGVSCDSCLKANFRGKRYKCLICYDYDLCATCYEAGATNTRHTPDHPMQCILTRSDFDLYYGGEAVSVEQPQSFTCPICGKMGFTEATLQEHVTSEHTDTSFEVVCPVCAALPGGEPNHVTEDFAAHLSLEHRS 141
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Match: L7MHS4 (Putative potassium channel modulatory factor 1 protein (Fragment) OS=Rhipicephalus pulchellus OX=72859 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.003e-40 Identity = 68/143 (47.55%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 53 YFMNK--KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGE-VQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 YF+++ +HEG+SCD C K+ F +RYKCL+C+DYDLCG C++ + H DH MQC+LT+ D+ +Y GE V + S+TCPICGK+G T +TL++H+ EH++++ EV+CPVCA+L G N T++ HLS +H S Sbjct: 33 YFVSRMSRHEGVSCDSCMKANFRGKRYKCLICYDYDLCGTCYEAGATNTRHTPDHAMQCILTRSDFDLYYGGEAVSVEQPQSFTCPICGKMGFTELTLQEHVTAEHTDASSEVVCPVCAALPGGEPNHVTEDFAAHLSLEHRS 175
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Match: A0A131XB13 (Putative e3 ubiquitin-protein ligase kcmf1 (Fragment) OS=Hyalomma excavatum OX=257692 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.534e-40 Identity = 68/143 (47.55%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 53 YFMNK--KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGE-VQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 YF+++ +HEG+SCD C K+ F +RYKCL+C+DYDLCG C++ + H DH MQC+LT+ D+ +Y GE V + S+TCPICGK+G T +TL++H+ EH++++ EV+CPVCA+L G N T++ HLS +H S Sbjct: 26 YFVSRMSRHEGVSCDSCMKANFRGKRYKCLICYDYDLCGTCYEAGATNTRHTPDHAMQCILTRSDFDLYYGGEAVSVEQPQSFTCPICGKMGFTELTLQEHVTAEHTDASSEVVCPVCAALPGGEPNHVTEDFAAHLSLEHRS 168
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Cavefish
Match: kcmf1 (potassium channel modulatory factor 1 [Source:NCBI gene;Acc:393927]) HSP 1 Score: 148.673 bits (374), Expect = 4.875e-39 Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 77 GISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 G+SCD C K F RRYKCL+C+DYDLC C++ + H ++HPMQC+LT+ D+ +Y GE + S+TCP CGK+G+T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 1 GVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 133
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Sea Lamprey
Match: kcmf1 (potassium channel modulatory factor 1 [Source:NCBI gene;Acc:393927]) HSP 1 Score: 159.844 bits (403), Expect = 1.170e-43 Identity = 65/136 (47.79%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQT-DLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ ++ H +DHPMQC+LT+ D+ +Y GE T + S+TCP CGK+G T TL++H+ EH+ ++ EV+CPVCA+L G+ N T +L HL+ +H + Sbjct: 3 RHEGVSCDACMKGNFRGRRYKCLICYDYDLCASCYESGATTSRHAADHPMQCILTRVDFDLYYGGEALTAEQPQSFTCPYCGKMGLTEATLQEHVTSEHAEASTEVVCPVCAALPGGDPNHVTDDLAAHLTVEHRT 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Sea Lamprey
Match: rnf166 (ring finger protein 166 [Source:ZFIN;Acc:ZDB-GENE-061121-1]) HSP 1 Score: 49.6766 bits (117), Expect = 4.347e-7 Identity = 22/61 (36.07%), Postives = 32/61 (52.46%), Query Frame = 2 Query: 284 FSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 F++ CP CG L H + H + V+CPVCAS+ G+ N + N I HL+ +H Sbjct: 106 FTFMCPYCGTRNLDQDDLLRHCMERHHSDRTRVVCPVCASMPWGDPNYCSSNFIQHLTHRH 166
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Nematostella
Match: EDO37139 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SGR5]) HSP 1 Score: 151.369 bits (381), Expect = 2.607e-40 Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQT-DLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C+K F +R+KCL+C+DYDLC CF+ + H +DHPMQC+LT+ D+ +Y GE T D S+TCP C K+G T L +H+ EHS++++EV+CPVCA+L G+ N T + HL+ H + Sbjct: 3 RHEGVSCDSCNKGNFRGKRFKCLICYDYDLCATCFENGVTTTRHTADHPMQCILTRADFDLYYGGEAFTADQPQSFTCPYCSKIGFTEALLLEHVTSEHSDASLEVVCPVCAALPGGDPNYVTDDFAAHLTLGHRT 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Nematostella
Match: EDO25942 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TDB0]) HSP 1 Score: 112.464 bits (280), Expect = 1.857e-29 Identity = 49/104 (47.12%), Postives = 71/104 (68.27%), Query Frame = 2 Query: 80 ISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQT-DLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVIC 388 +SCD C+K F +R+KCL+C+DYDLC CF+ + H +DHPMQC+LT+ D+ +Y GE T D S+TCP C K+G T L +H+ EHS++++EV+C Sbjct: 2 VSCDSCNKGNFRGKRFKCLICYDYDLCATCFENGVTTTRHTADHPMQCILTRADFDLYYGGEAFTADQPQSFTCPYCSKIGFTEALLLEHVTSEHSDASLEVVC 105
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Nematostella
Match: EDO47831 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKW6]) HSP 1 Score: 50.0618 bits (118), Expect = 2.298e-6 Identity = 33/121 (27.27%), Postives = 55/121 (45.45%), Query Frame = 2 Query: 65 KKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIE---VICPVCASLSDGN 418 K ++C C RYKCL C++Y LC CF + S +H +DH M+ +Y T+ AGE + L + +CG +L D + + ++ ++ P+ + LS N Sbjct: 217 KTEHQVACQVCKNKPVVGFRYKCLHCYNYVLCQDCFWRGKVSQHHKTDHDMR------EYSTWNAGEKGSSLRSKF---LCGSGKKKRPSLPDFPREPEPSRTLDMTNIVPPLPSDLSGPN 328
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Match: ENSORLT00000032467.1 (E3 ubiquitin-protein ligase KCMF1 [Source:NCBI gene;Acc:105354713]) HSP 1 Score: 152.91 bits (385), Expect = 3.434e-40 Identity = 59/136 (43.38%), Postives = 93/136 (68.38%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H ++HPMQC+LT+ D+ +Y GE + ++TCP CG++G+T ++L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQAFTCPYCGRMGYTEISLQEHVAAEHTETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRA 138
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Match: ENSORLT00000002293.2 (E3 ubiquitin-protein ligase KCMF1 [Source:NCBI gene;Acc:105354713]) HSP 1 Score: 152.14 bits (383), Expect = 5.143e-40 Identity = 59/134 (44.03%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKH 466 +HEG+SCD C K F RRYKCL+C+DYDLC C++ + H ++HPMQC+LT+ D+ +Y GE + ++TCP CG++G+T ++L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H Sbjct: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQAFTCPYCGRMGYTEISLQEHVAAEHTETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Match: KCMF1 (potassium channel modulatory factor 1 [Source:NCBI gene;Acc:101167220]) HSP 1 Score: 90.5077 bits (223), Expect = 2.748e-19 Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 215 MQCLLTKYDYGTFYAGEV-QTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNS 472 MQC+LT+ DY +Y G+ + S+TCP CGK+G T +L++H+ EH+ ++ EVICP+CA+L G+ N T + HL+ +H + Sbjct: 1 MQCILTRVDYDLYYGGDTFSVEQPQSFTCPYCGKMGFTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFTAHLTLEHRA 87
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 52.7582 bits (125), Expect = 1.140e-6 Identity = 22/51 (43.14%), Postives = 28/51 (54.90%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQ 220 +H I CD C K G R+KC +CFDYDLC C+ +N H HP + Sbjct: 130 RHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTQCY----MNNKHDLSHPFE 176
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 51.9878 bits (123), Expect = 2.014e-6 Identity = 22/51 (43.14%), Postives = 28/51 (54.90%), Query Frame = 2 Query: 68 KHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQ 220 +H I CD C K G R+KC +CFDYDLC C+ +N H HP + Sbjct: 77 RHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTQCY----MNNKHDLSHPFE 123
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Planmine SMEST
Match: SMESG000028809.1 (SMESG000028809.1) HSP 1 Score: 961.059 bits (2483), Expect = 0.000e+0 Identity = 545/548 (99.45%), Postives = 547/548 (99.82%), Query Frame = 2 Query: 59 MNKKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQPSNNRSRKTIQPNINSEPTNTSSSTVHSFSTGNFFTSHDQSSFGSSEEPLLHTLLNHLYTWRSRRENATPITKKNFGSEIKTLTNTSSENNSILNETVINQAQPIRRGSSLLNEXXXXXXXXXXXXXXXXVRSTFHDKNKSIRRKLGSRHIIDLTGDNWRXXXXXXXXXXXXXXXXXXXXXXXNQASLQAGXXXXXXXXXXXXXXASLIPWGQDLGPESIFNQLKAIADPKSSLVSSNNSFVRXXXXXXXXXXXXXXXXXHMVTMMNSSLIPGSDSLDFKLSNNIHLPGTCEFITDNEKNPIYVNLEEHLGSIGLFPRDIHSLNQQNVDEQNSILKQRSHFLRDLILSTFITNLDATGDICYGEKKRQYNKNSKAVLI 1702 MNKKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQPSNNRSRKTIQPNINSEPTNTSSSTVH+FSTGNFFTSHDQSSFGSSEEPLLHTLLNHLYTWRSRRENATPITKKNFGSEIKTLTNTSSENNSILNETVINQAQPIRRGSSLLNETSTSNQSSGNLSRSSTVRSTFHDKNKSIRRKLGSRHIIDLTGDNWRLLDPDNDLFSFDDDDLESISLSLNQASLQAGDIDDSEYMDDDEDIASLIPWGQDLGPESIFNQLKAIADPKSSLVSSNNSFVRLNGSLSSNSNISASSLLHMVTMMNSSLIPGSDSLDFKLSNNIHLPGTCEFITDNEKNPIYVNLEEHLGSIGLFPRDIHSLNQQNVDEQNSILKQRSHFLRDLILSTF+TNLDATGDICYGEKK QYNKNSKAVLI Sbjct: 1 MNKKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDHPMQCLLTKYDYGTFYAGEVQTDLAFSYTCPICGKLGHTVVTLKDHLNQEHSNSNIEVICPVCASLSDGNANQQTKNLIYHLSTKHNSLISGESQEYSPKVTRRFSKQTRNGTEISNSLQPSNNRSRKTIQPNINSEPTNTSSSTVHTFSTGNFFTSHDQSSFGSSEEPLLHTLLNHLYTWRSRRENATPITKKNFGSEIKTLTNTSSENNSILNETVINQAQPIRRGSSLLNETSTSNQSSGNLSRSSTVRSTFHDKNKSIRRKLGSRHIIDLTGDNWRLLDPDNDLFSFDDDDLESISLSLNQASLQAGDIDDSEYMDDDEDIASLIPWGQDLGPESIFNQLKAIADPKSSLVSSNNSFVRLNGSLSSNSNISASSLLHMVTMMNSSLIPGSDSLDFKLSNNIHLPGTCEFITDNEKNPIYVNLEEHLGSIGLFPRDIHSLNQQNVDEQNSILKQRSHFLRDLILSTFVTNLDATGDICYGEKKGQYNKNSKAVLI 548 The following BLAST results are available for this feature:
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of E3 ubiquitin-protein ligase KCMF1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30006656 ID=SMED30006656|Name=E3 ubiquitin-protein ligase KCMF1|organism=Schmidtea mediterranea sexual|type=transcript|length=1915bpback to top protein sequence of SMED30006656-orf-1 >SMED30006656-orf-1 ID=SMED30006656-orf-1|Name=SMED30006656-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=559bp MNKKHEGISCDFCHKSGFSLRRYKCLLCFDYDLCGPCFDFKRESNNHHSDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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