Nuclear pore protein

Overview


Name	Nuclear pore protein
Smed ID	SMED30006639
Length (bp)	2537

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Nuclear pore protein (SMED30006639) t-SNE clustered cells

Violin plots show distribution of expression levels for Nuclear pore protein (SMED30006639) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Nuclear pore protein (SMED30006639) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Nuclear pore protein (SMED30006639) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30006639

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
X1 cell	SMED30006639	h1SMcG0001921	SmedASXL_012252	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30006639	h1SMcG0001921	SmedASXL_012252	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015

Note: Hover over icons to view figure legend

Homology

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BLAST of Nuclear pore protein vs. Ensembl Human
Match: NUP93 (nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958])

HSP 1 Score: 286.96 bits (733), Expect = 8.638e-84
Identity = 246/866 (28.41%), Postives = 411/866 (47.46%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTV-------LSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKY------------RQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +           +++   E    +I  V       L   E+ YARQI  Y + +VNG+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V  AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  L R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   ++R +L+P++ +  S+   +  F+N  + +R     +L++ M  L    K             ++   D   ++R++A  LITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE----------DALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDL--------CASVAELDDKSISDMWTMVKQMTDVLLTPATDA----LKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN 819

[Close]

BLAST of Nuclear pore protein vs. Ensembl Human
Match: NUP93 (nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958])

HSP 1 Score: 266.929 bits (681), Expect = 5.412e-76
Identity = 229/796 (28.77%), Postives = 385/796 (48.37%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL 2335
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  +     ++ L   E+ YARQI  Y + +VNG+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V  AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  L R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   ++R +L+P++ +  S+   +  F+N  + +R     +L++ M  L
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDL--------CASVAELDDKSISDMWTMVKQMTDVLLTPATDA----LKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756

[Close]

BLAST of Nuclear pore protein vs. Ensembl Human
Match: NUP93 (nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958])

HSP 1 Score: 229.95 bits (585), Expect = 4.445e-64
Identity = 196/681 (28.78%), Postives = 319/681 (46.84%), Query Frame = 2

Query:  536 KTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKY------------RQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            ++ L   E+ YARQI  Y + +VNG+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V  AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  L R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   ++R +L+P++ +  S+   +  F+N  + +R     +L++ M  L    K             ++   D   ++R++A  LITF G +PYR   +  A L Q+E+ +N
Sbjct:   52 RSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDL--------CASVAELDDKSISDMWTMVKQMTDVLLTPATDA----LKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN 696

[Close]

Query:  536 KTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKY------------RQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            ++ L   E+ YARQI  Y + +VNG+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V  AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  L R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   ++R +L+P++ +  S+   +  F+N  + +R     +L++ M  L    K             ++   D   ++R++A  LITF G +PYR   +  A L Q+E+ +N
Sbjct:   52 RSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDL--------CASVAELDDKSISDMWTMVKQMTDVLLTPATDA----LKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN 696

[Close]

BLAST of Nuclear pore protein vs. Ensembl Human
Match: NUP93 (nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958])

HSP 1 Score: 83.5741 bits (205), Expect = 2.327e-17
Identity = 52/175 (29.71%), Postives = 83/175 (47.43%), Query Frame = 2

Query:  788 ELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHL 1297
            E+    V  AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +
Sbjct:   42 EVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQV 214

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BLAST of Nuclear pore protein vs. Ensembl Celegans
Match: npp-13 (Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc:Q9BKT9])

HSP 1 Score: 95.5153 bits (236), Expect = 4.641e-20
Identity = 115/528 (21.78%), Postives = 218/528 (41.29%), Query Frame = 2

Query:  965 EDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASS--NLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIY-CLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLL--QLQKLISEEYGESHFCANKNP--LTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNG---FVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEF-VLSRMPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL---------REAVKYRQYSHDYLVEIRNR----ASALITFTGQLPYRMPSEVYANLSQLE 2476
            ED+++ G+P W + + C+R+G  + A     +  S          L      G L  E  +KL  E++ ++  + D +KR +Y  L+ G D       +  T++++IW +L  L H +                     Q   +L  ++QK +S +YGE +F +N       +   L L   FE A+  L      R  +VH+A++  +   L +S      +L   D++      +NL RL+  YT+ FE      +LD +++L  +      P G   F    S     +   + +  + +  DGR  +GL+  Y     +V+  V+     TG  + A     LA K   AA  L+  I+ ++   +       +    +F  + R  +++E + LS ++ +          + E A       +L+P   D  ++   +  F  +P+ VR + P + +  M+ L          +A +    +   +    NR      A++ ++  +PY+ P+ V + L QL+
Sbjct:  157 EDDSIDGMPTWQVTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLAHTKDKYKRALYAALLGGLD----SAALADTLENWIWFKLYPL-HVDP--------------------QLTDVLFKEVQKAVSVDYGEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQ-RVDSVHVAVLAHKLGYLRMSKKSTDEMLV-VDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGIT----TPTGSDVFEMAVSRSVYLTGQTDEILGK-LTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGLYLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVDLAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTV--IVNEFHMVPQKVREVLPDMCLHLMKCLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQLQ 650

[Close]

BLAST of Nuclear pore protein vs. Ensembl Celegans
Match: npp-13 (Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc:Q9BKT9])

HSP 1 Score: 95.5153 bits (236), Expect = 6.174e-20
Identity = 115/528 (21.78%), Postives = 218/528 (41.29%), Query Frame = 2

Query:  965 EDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASS--NLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIY-CLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLL--QLQKLISEEYGESHFCANKNP--LTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNG---FVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEF-VLSRMPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL---------REAVKYRQYSHDYLVEIRNR----ASALITFTGQLPYRMPSEVYANLSQLE 2476
            ED+++ G+P W + + C+R+G  + A     +  S          L      G L  E  +KL  E++ ++  + D +KR +Y  L+ G D       +  T++++IW +L  L H +                     Q   +L  ++QK +S +YGE +F +N       +   L L   FE A+  L      R  +VH+A++  +   L +S      +L   D++      +NL RL+  YT+ FE      +LD +++L  +      P G   F    S     +   + +  + +  DGR  +GL+  Y     +V+  V+     TG  + A     LA K   AA  L+  I+ ++   +       +    +F  + R  +++E + LS ++ +          + E A       +L+P   D  ++   +  F  +P+ VR + P + +  M+ L          +A +    +   +    NR      A++ ++  +PY+ P+ V + L QL+
Sbjct:  289 EDDSIDGMPTWQVTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLAHTKDKYKRALYAALLGGLD----SAALADTLENWIWFKLYPL-HVDP--------------------QLTDVLFKEVQKAVSVDYGEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQ-RVDSVHVAVLAHKLGYLRMSKKSTDEMLV-VDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGIT----TPTGSDVFEMAVSRSVYLTGQTDEILGK-LTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGLYLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVDLAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTV--IVNEFHMVPQKVREVLPDMCLHLMKCLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQLQ 782

[Close]

BLAST of Nuclear pore protein vs. Ensembl Fly
Match: Nup93-2 (gene:FBgn0038274 transcript:FBtr0083008)

HSP 1 Score: 245.743 bits (626), Expect = 2.091e-69
Identity = 238/855 (27.84%), Postives = 400/855 (46.78%), Query Frame = 2

Query:   32 NLDDLVLQAENIATNLEDD-EVPHVHRNIEQLRKRGEAFSNRAAQ---NDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVN-SDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQS--ECSPVNN-TRHSEFTEISRLL----LRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXF------SRVMEEDGRTHQGLLSRYGHVADD---VLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDV-SRLQSKAEF---VLSRMPESAEGSLLSC-ILTIGRFIFSSM--EGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYS--------HDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ L+ +A+N+  + + + E+P V R ++Q+ +      +R  Q    +I+A  LLG+K G +L   L++ LE+L    +++ +      D+ +FLKNERENAILS I  TK N  + + K    +    W  EK  +L+ L+  S    +L        VN   +      ++ L   E+ YA+++  Y + L+  +   +       L QS  +C   +  T  +  T+IS  L    ++  + RP                     V  A ++LE  Y +    F+   +  + A +  Q  VA+V  +   +   G ++  TV  +P+WPL++  LR G  + AV   ++A S+  EF +L+    NAG  + +   +L  +Y   IR S+D +K+ +YC++ GCDV++VH +V  T+DDF+W+RL  ++  +A               N G        +LQ +I E+YGE +F A + P  Y   L L   FE A+ FL R D  R HAVH+A+ L++  LL  + ++  PLLS   +DPQ L R+NL RL+  Y ++FE +   EAL  +Y L  L   +   N F+ C   L V+S   +          R   +    + GL  ++     D   +   V       G  E +    ++AGKY  A   +  L+A  + LP+    +  RL   A+    +L+      E  + S  +L     IF +   +G   AAL  L +TQL+P + D   +   +   K L   V  + P ++V+AM   ++  +Y+Q             + ++R RA AL      +PYR+P++    L +LEL+++
Sbjct:    2 DLNTLLQRAQNLNNDAKAECELPAVERTLQQVLRATTELHSRVTQTGCKEIQAHILLGSK-GVDLPK-LNQKLEALSARKTFEPLDVKADTDVRTFLKNERENAILSVIEDTKKNISDSANKQRWASMNKVWNEEKTRLLDALIAPSQNFIDLQRLPEPTIVNPLCQP-----RSCLDPLELVYAQELRHYNELLLKSSHRPNLVQKFAHLSQSFGDCRLTDMWTLLACVTQISEPLRSDPIKSRQQRPE-------------------FVTYAKSYLERRYRV----FMCSQVGGSYANNSYQLVVAYVNHRFRAQQTIGLVD--TVREIPLWPLVYYGLRCGAVKVAVEFLREAGSSHDEFAQLVADR-NAGETNSKIENQLRLQYANKIRNSTDAYKKAVYCILLGCDVNEVHGEVAKTIDDFLWMRLAMIQPGDA--------------DNYG--------KLQSMILEQYGEKYFNARQQPYLYFETLALTGQFEAAIEFLARQDENRAHAVHMAIALFELGLLGSARSVSQPLLSIDIKDPQPLRRLNLTRLIRQYVQRFERTDTSEALHYYYTLRCLKDSKGR-NMFMACVCDLVVDSGVFDTTIFDLIFGKRQSSDQNDVNSGLFRQFECPEFDTRTMAAQVGDELAALGNFEMSARLYEMAGKYNLAVKHICILMAQVVHLPTLGGSLRERLGQDAQRFNQLLASDSIDVEPKMKSSFVLLQDLLIFFNFYHDGKFNAALDLLRQTQLVPNTLDDVDV--VLGNVKQLSGEVIKVLPDVIVAAMEIAQK--QYKQLKAGSGSSLEQTQMQQLRQRAKALSNMAATMPYRLPNDTNKRLIELELDMH 796

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BLAST of Nuclear pore protein vs. Ensembl Fly
Match: Nup93-1 (gene:FBgn0027537 transcript:FBtr0073828)

HSP 1 Score: 237.654 bits (605), Expect = 2.239e-66
Identity = 241/875 (27.54%), Postives = 410/875 (46.86%), Query Frame = 2

Query:   32 NLDDLVLQAENIATNLEDD-EVPHVHRNIEQLRKRGEAFSNRAAQ---NDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADW------WKGEKNNILNLLV--NSDKLPN----LLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSD---EQYHVAFVETQILPEFDGGNLEDETVM--------GVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAG--TLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXX---XXXXXXFSRVMEEDGRTHQGLLSRYG-HVAD--DVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDV-SRLQS-----KAEFVLSRMPESAEGSLLSCILT-IGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNL-PELVRSMFPGLLVSAMRTL-REAVKY---RQYSHDYLVE------------IRNRASALITFTGQLPYRMPSEVYANLSQLEL 2479
            +L +L+ QA+ +      D EVP V R + Q+ +  + F +R  Q   ND++A  LLG+K G +L   L++ LESL    +++ I  +   ++ ++LKNERENAILS I+ T  +     +K  E+ K  W      W  EK  +LN LV  N    P+    ++ TA+      Y++         L+  E  YA QIA +  S++ G       +L H++  S     N+   +E   + + +       P  S  D    R+T    S   VE A  +LE  Y  Y+++FI  + ++A AR       YH       ++  + G  L+ +  +        G P+WP ++  LRSG    A    K+ S    +   LL L  N     L ++   +L  EY   +RA +D +K+ +Y ++  CD    H +++ ++DDF+W++L+ LR S+               S+   EQ  +   LQ LI E+YGE++F A +    Y ++L L   FE A+ FL R +  R HA+H+A+ L + ++L    +++  LLS   +DP+ + R+NL+RL+ +YT+ FE +   +AL  +Y+L +        N  +TC   L VE      LEL+F    +++G  + G+ + +  H  D   + E V     + G  E A +   + G+  +A   +  L+A  +  P+ +  V +RL        A  V+ +     +  +   +LT + +F     EG + +AL  L    L+P S  S  +   +   K + PE+++ + P +L+++M  + +E VK     + +  +  E            +R+RA A       +PYRMPS     L QLE+
Sbjct:    2 DLMELLKQAQRLTNETNTDTEVPGVERTMSQVLQATKEFHSRVTQMGTNDLQAHILLGSK-GVDLPK-LTQKLESLSARQTFEPIDPVTETNVQAYLKNERENAILSVIDETNRSI----FKSVERQK--WRCIYSEWGEEKEALLNALVGPNQQDFPDVQFQIVPTAMADEPTPYSQ---------LNGHEQMYAEQIAIHNQSIILGRRPNLLSTLAHVVQDS----FNDESVAEMWNVLQFM---TALPPVSSTIDPIKNRQT----SPQFVEQARTYLERRYRTYMRKFI--VANLAKARRGGIPSVYH-------MVRSYVGVTLQGQRALYGLHDVNNGQPLWPHVYYSLRSGDMDAAALYLKE-SGTCPDLLTLLTLRKNGDRDNLMVKLEGQLKLEYNSRLRACTDPYKKAVYVVLLACDPHFTHVELMRSIDDFLWMQLSILRRSDQ--------------SDSNTEQL-TFSGLQSLILEKYGENYFNAREKAALYFQVLTLTGQFEAAIEFLARTEKNRTHAIHMAIALNEISMLGTPRSVEQSLLSSDPDDPKPMKRLNLVRLIVMYTKCFERTDTTQALHYYYLLRNFKSENGRGNVMLTCVCDLLVEKCDDEMLELIFGTEDKKNGLRYGGIYAEFQIHECDKYSLAEMVGDELSKRGDYELAIELYFIGGQLDKALRLVNSLLAQVVHQPTQNGSVRNRLGDIINRLDAALVVRKSDVEVQVVVTYTVLTKVMKFFDHYHEGALRSALEILTNNHLIPAS--SLEVDECVTNIKRMGPEVIK-VLPDILLASMDIVYQEYVKLMDSNETASGFFDESKCVNKEPAVKHLRDRAKAFTNMAASVPYRMPSTTNQRLVQLEI 820

[Close]

BLAST of Nuclear pore protein vs. Ensembl Zebrafish
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:30172])

HSP 1 Score: 291.582 bits (745), Expect = 1.390e-85
Identity = 253/863 (29.32%), Postives = 417/863 (48.32%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRA----AQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNV---YTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQL---AGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSR------MPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSH-----------------DYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R     +Q+  D+KA+ LLG++ G ++   +S+ LESL    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +    +    W+  K  +L+ L+ + +       AL+ S  V   +  E     ++ L   E+ Y+RQI  + + +VNG+        L   L   C+ V  +   +      L+++         A D ++      ++    V  AL  LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW L++ CLR G    A+ +  +A   LG+F    + + N+    LS     KL   Y+R +R S+D +KR +YCLI  CD+ D H +V    +D++WL+L  +                  GS+   ++  +L QLQK + E+YGESHF A+  P  Y ++L L   FE A+AFL R + LR HAVH+ALVL++  LLL S+   + LLS+   DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L +    Q + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +L   A K  E    L   +   +S P S+ +  RL++ A  +  R        E +  +    +L +  F      G I+ A   ++R +L+P+S D  S+   +  F+N  + VR     +L++ M  L     + QY                   D  + +R +A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLGSR-GLDIFH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGE------DALDFSQEVEPSFVSEVGVPGRSALDSVEVAYSRQIYVFNEKIVNGH--------LQPNLGDLCASVAESLDDKNVSEMWLMVKQMTDVLLVPAKD-TLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKLPTPLPG--MQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNKAQHQLGDFKIWFQEYMNSPDRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLNQVCFDE-------------DGSSSPQDRM-TLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFLFRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPVIAQVSEPQSNKE--RLKNMAVAIAERYRANGVAGEKSVDNTFYLLLDLMTFFDEYHAGHIDRAYDVIERLKLVPLSQD--SVEERVAAFRNFSDEVRHNLSEVLLATMNIL-----FTQYKRLKGAAAGTPGRPQRTLEDRDMLLRIQARALITFAGMIPYRMAGDTNARLVQMEVLMN 820

[Close]

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRA----AQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNV---YTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQL---AGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSR------MPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSH-----------------DYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R     +Q+  D+KA+ LLG++ G ++   +S+ LESL    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +    +    W+  K  +L+ L+ + +       AL+ S  V   +  E     ++ L   E+ Y+RQI  + + +VNG+        L   L   C+ V  +   +      L+++         A D ++      ++    V  AL  LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW L++ CLR G    A+ +  +A   LG+F    + + N+    LS     KL   Y+R +R S+D +KR +YCLI  CD+ D H +V    +D++WL+L  +                  GS+   ++  +L QLQK + E+YGESHF A+  P  Y ++L L   FE A+AFL R + LR HAVH+ALVL++  LLL S+   + LLS+   DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L +    Q + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +L   A K  E    L   +   +S P S+ +  RL++ A  +  R        E +  +    +L +  F      G I+ A   ++R +L+P+S D  S+   +  F+N  + VR     +L++ M  L     + QY                   D  + +R +A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLGSR-GLDIFH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGE------DALDFSQEVEPSFVSEVGVPGRSALDSVEVAYSRQIYVFNEKIVNGH--------LQPNLGDLCASVAESLDDKNVSEMWLMVKQMTDVLLVPAKD-TLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKLPTPLPG--MQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNKAQHQLGDFKIWFQEYMNSPDRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLNQVCFDE-------------DGSSSPQDRM-TLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFLFRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPVIAQVSEPQSNKE--RLKNMAVAIAERYRANGVAGEKSVDNTFYLLLDLMTFFDEYHAGHIDRAYDVIERLKLVPLSQD--SVEERVAAFRNFSDEVRHNLSEVLLATMNIL-----FTQYKRLKGAAAGTPGRPQRTLEDRDMLLRIQARALITFAGMIPYRMAGDTNARLVQMEVLMN 820

[Close]

BLAST of Nuclear pore protein vs. Ensembl Zebrafish
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:30172])

HSP 1 Score: 196.823 bits (499), Expect = 4.858e-54
Identity = 152/526 (28.90%), Postives = 254/526 (48.29%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNV---YTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLA 1555
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++   +S+ LESL    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +    +    W+  K  +L+ L+ + +       AL+ S  V   +  E     ++ L   E+ Y+RQI  + + +VNG+        L   L   C+ V  +   +      L+++         A D ++      ++    V  AL  LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW L++ CLR G    A+ +  +A   LG+F    + + N+    LS     KL   Y+R +R S+D +KR +YCLI  CD+ D H +V    +D++WL+L  +                  GS+   ++  +L QLQK + E+YGESHF A+  P  Y ++L L   FE A+AFL R + LR HAVH+A
Sbjct:    2 DTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLGSR-GLDIFH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGE------DALDFSQEVEPSFVSEVGVPGRSALDSVEVAYSRQIYVFNEKIVNGH--------LQPNLGDLCASVAESLDDKNVSEMWLMVKQMTDVLLVPAKD-TLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKLPTPLPG--MQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNKAQHQLGDFKIWFQEYMNSPDRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLNQVCFDE-------------DGSSSPQDRM-TLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFLFRVERLRSHAVHVA 494

[Close]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Match: sall3 (spalt-like transcription factor 3 [Source:Xenbase;Acc:XB-GENE-491129])

HSP 1 Score: 274.248 bits (700), Expect = 2.149e-79
Identity = 229/786 (29.13%), Postives = 388/786 (49.36%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL 2335
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQI  Y + +V+G+       L        C+        +      ++++     P   A D S+      ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    LS     KL   Y+R +RAS+D +KR++YC+I  CDV D H +V    +D++WL+L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQIYMYNEKVVSGHLQPSLVEL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-SLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNIL 757

[Close]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Match: sall3 (spalt-like transcription factor 3 [Source:Xenbase;Acc:XB-GENE-491129])

HSP 1 Score: 273.863 bits (699), Expect = 6.169e-79
Identity = 229/786 (29.13%), Postives = 388/786 (49.36%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL 2335
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQI  Y + +V+G+       L        C+        +      ++++     P   A D S+      ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    LS     KL   Y+R +RAS+D +KR++YC+I  CDV D H +V    +D++WL+L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQIYMYNEKVVSGHLQPSLVEL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-SLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNIL 757

[Close]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Match: sall3 (spalt-like transcription factor 3 [Source:Xenbase;Acc:XB-GENE-491129])

HSP 1 Score: 261.922 bits (668), Expect = 3.357e-75
Identity = 224/786 (28.50%), Postives = 379/786 (48.22%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL 2335
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQ    +  +V                             + T++  L+      +  CS            ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    LS     KL   Y+R +RAS+D +KR++YC+I  CDV D H +V    +D++WL+L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQNVSDLWVMVK----------------------------QMTDVP-LIPASDSLKSRCSV-----------QMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNIL 726

[Close]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Match: sall3 (spalt-like transcription factor 3 [Source:Xenbase;Acc:XB-GENE-491129])

HSP 1 Score: 239.58 bits (610), Expect = 9.763e-67
Identity = 237/854 (27.75%), Postives = 407/854 (47.66%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLI------YCLIAGCDVDDVHKDVLTTVDDFIW-LRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYS------------HDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQI  Y + +V+G+       L        C+        +      ++++     P   A D S+      ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    +  T    T   +H+       K+L+      +CL     +  V KD  ++V +F++ ++L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L    K  + S             D    +R++A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQIYMYNEKVVSGHLQPSLVEL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-SLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRLTMTCDFLT--SKHLNF---FLKKLVIGYFVRFCLKPNLFILKV-KD--SSVHNFVFFVQLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPNTLGRPQRAQEDKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN 817

[Close]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Match: sall3 (spalt-like transcription factor 3 [Source:Xenbase;Acc:XB-GENE-491129])

HSP 1 Score: 239.195 bits (609), Expect = 1.305e-66
Identity = 233/850 (27.41%), Postives = 401/850 (47.18%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAG---TLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYS------------HDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQI  Y + +V+G+       L        C+        +      ++++     P   A D S+      ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    T++++ +   A   + H         R +  ++   D++                 +TH + S    E++         +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L    K  + S             D    +R++A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQIYMYNEKVVSGHLQPSLVEL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-SLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRTVTVKMSLGEAIRSRHH---------RKLVLVVGRGDIE---------------CNITHFKLSQVCFEDE---------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPNTLGRPQRAQEDKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN 802

[Close]

BLAST of Nuclear pore protein vs. Ensembl Mouse
Match: Nup93 (nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055])

HSP 1 Score: 290.041 bits (741), Expect = 4.458e-85
Identity = 247/859 (28.75%), Postives = 418/859 (48.66%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  + +   ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

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Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  + +   ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

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Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  + +   ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

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BLAST of Nuclear pore protein vs. Ensembl Mouse
Match: Nup93 (nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055])

HSP 1 Score: 231.876 bits (590), Expect = 5.989e-65
Identity = 197/678 (29.06%), Postives = 321/678 (47.35%), Query Frame = 2

Query:  536 KTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLEL 2479
            ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+EL
Sbjct:   52 RSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEL 693

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BLAST of Nuclear pore protein vs. UniProt/SwissProt
Match: sp|Q7ZX96|NUP93_XENLA (Nuclear pore complex protein Nup93 OS=Xenopus laevis OX=8355 GN=nup93 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.631e-87
Identity = 247/849 (29.09%), Postives = 419/849 (49.35%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKY------------RQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQ+  Y + +V+G+       L        C+        +      ++++     P   A D ++      ++    V  ALN+LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  + G PVW L++ C+R G    A  +  +A   LG+F    + + +     LS     KL   Y+R +RAS+D +KR +YC+I  CDV D H +V    +D++WL+L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS+   +PQG+ R+N +RL+ LYTRKFE + P+EAL  FY L +   +Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G I+ +   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L    K             ++   D    +R++A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQMYMYNEKVVSGHLQPSLVDL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-TLKSRCSGQMQMAFVRQALNYLEQSYKNYTLISVFANLQQAQLGGVPGTYNLVRSFLNIRLPTPIPG--LQDGEIEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYIHNKDRRLSPTTENKLRLHYRRAVRASTDPYKRAVYCIIGRCDVSDNHSEVADKTEDYLWLKLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSQEPGEPQGVRRLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDNQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHIDLSFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPTTLGRPQRVQEDKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN 820

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BLAST of Nuclear pore protein vs. UniProt/SwissProt
Match: sp|Q6NX12|NUP93_XENTR (Nuclear pore complex protein Nup93 OS=Xenopus tropicalis OX=8364 GN=nup93 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.529e-87
Identity = 249/849 (29.33%), Postives = 417/849 (49.12%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSN----RAAQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPE---SAEGSLLSC---ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYS------------HDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +    R +Q   ++KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ S +  + L+    +S   Y  E+    ++ L   E+ YARQI  Y + +V+G+       L        C+        +      ++++     P   A D S+      ++    +  AL+ LE  Y  Y +      L    +      Y++  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LG+F    + + ++    LS     KL   Y+R +RAS+D +KR++YC+I  CDV D H +V    +D++WL+L+ +   +               +N   +   +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R +  RCHAVH+AL L++  LLL ST   + LLS    DPQG+  +N +RL+ LYTRKFE + P+EAL  FY L +    Q + + F+ C S L +ES   ++L  + +E+DG    G + ++      ++  V+      G  E A     LA    K  E    L   + + IS P S+ +  RL++ A  +  R      SAE S+ S    +L +  F      G ++ A   ++R +L+P+S D  S+   +  F+N  + +R     +L++ M  L    K  + S             D    +R++A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASGE--DALDFT-QESETSYISESGAPGRSSLDNVEMAYARQIYMYNEKVVSGHLQPSLVEL--------CTEAAERLDDKNVSDLWVMVKQMTDVPLIPASD-SLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPAPIPG--LQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSKDRRLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLSQVCFEDE--------------ANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SMFLRCVSELVIESREFDMLLGK-LEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRE--RLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQD--SVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPNTLGRPQRAQEDKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN 820

[Close]

BLAST of Nuclear pore protein vs. UniProt/SwissProt
Match: sp|A5PJZ5|NUP93_BOVIN (Nuclear pore complex protein Nup93 OS=Bos taurus OX=9913 GN=NUP93 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.588e-86
Identity = 251/864 (29.05%), Postives = 418/864 (48.38%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEA-------ALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  +     ++ L   E+ YARQI  Y + +VNG+   +   L        C+ V        +++  ++ +           D+ +V  TD+  S+  VE        AL +LE  Y  Y +      L    +      Y +  +F+  ++     G  L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CDV D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   I   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYISDAGPPGRSSLDSIEMAYARQIYIYNEKIVNGHLQPNLLDL--------CASVTELDDKNISDMWAMVKQMT---------DVLLVPATDALKSRNSVEVRMEFVRQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPG--LQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPIVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

[Close]

BLAST of Nuclear pore protein vs. UniProt/SwissProt
Match: sp|Q66HC5|NUP93_RAT (Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 2.760e-84
Identity = 249/859 (28.99%), Postives = 417/859 (48.54%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  +     ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +S   R A   F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYVSDVSPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQESMEERVA--AFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

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BLAST of Nuclear pore protein vs. UniProt/SwissProt
Match: sp|Q8BJ71|NUP93_MOUSE (Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 3.118e-84
Identity = 247/859 (28.75%), Postives = 418/859 (48.66%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCE--FRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESAC---DALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL------------REAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++S  +S+ LESL    +++ +  +   DI  FLKNE++NA+LS+I  ++  T  ++ +   ++    W+  K  IL+ L+ S +  + L+    +S   Y  + +   ++ L   E+ YARQI  Y + +V+G+   +   L        C+ V        +++  ++ +  +    P   A    +   +  E+    V+ AL +LE  Y  Y +      L    +      Y +  +F+  + LP    G L+D  V G PVW L++ C+R G    A  +  +A   LGEF    + + N+    LS     KL   Y+R +R ++D +KR +YC+I  CD+ D   +V    +D++WL+L  +   +              G++   ++  +L Q QK + E+YGESHF  N+ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS    DP  + R+N +RL+ LYTRKFES+ P+EAL  FY L      Q + N F+ C S L +ES   +++  + +E DG    G++ ++      ++  V+      G  E A    D  + A K  E    L   +   IS P S+ +  RL++ A  +  R    A+G        S    +L +  F      G I+ A   +DR +L+P++ +  S+   +  F+N  + +R     +L++ M  L              A + ++   D   ++R++A ALITF G +PYR   +  A L Q+E+ +N
Sbjct:    2 DTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSR-GLDISH-ISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGE--DALDFT-QESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDL--------CASVAELDDKSISDMWAMVKQMTDVVLTPATDA----LKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK-LPAPSPG-LQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDD-------------DGTSSPQDRL-TLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGE-NMFLRCVSELVIESREFDMILGK-LENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKE--RLKNMALSIAERY--RAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQE--SVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN 819

[Close]

BLAST of Nuclear pore protein vs. TrEMBL
Match: A0A1S3KGV4 (Nuclear pore protein OS=Lingula unguis OX=7574 GN=LOC106181757 PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 5.665e-104
Identity = 265/868 (30.53%), Postives = 417/868 (48.04%), Query Frame = 2

Query:   32 NLDDLVLQAENIATNLE-DDEVPHVHRNIEQLRKRGEAFSNRAAQ-----NDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSD----KLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFI-QELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCN--AGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISL-PSSHPDVSRLQSKAEFVLSRMPESA-EGSLLSCILTIGRFIFSSM---------EGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSH-----------------------DYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
               DL+ QAE +   ++   E+P V R+I Q+   G     R AQ     +D+KA+ LLG+K G+++   +S+ LE L    +++ +  +   DI  FL+NERENA+L+ I  T+ NTL  + K    +  + W+ EK  ILN L+ +       P    + L  S+N+         ++ +   E+ YARQ+  Y + +V G        +   +        N       TEI R++    +  P  ++  +   R T   +    V  A  +LE  Y  YI   +   L    +      YH+  +F+  + LP    G LED  V G PVW +++ C+R G    A+ +A+QA  N+GEF   L+ +       LS     KL  +Y+R +R S+D +KR ++C+I  CD  DVH +V    +D++W++L+ +R  +         +  + GS    +   +L Q Q  +SEEYGESHF A + P  Y  +LLL   FE A+ FL+R + LRCHAVH+ALVL++ N+L +S ++ S LLSK   DP  + R+N  RLV +YTRKFE + P+EAL  FY L +L   Q D N F++C S L +E+   E L  R +E DG    G + ++      ++  V++     G  E A     LA   ++    + +L+   +S  PS H    RL+  A  +  R      EGS      T G F               G ++ AL  +   +L+P+S D  ++   +  F++  + +R   P +L++ M  L     Y QY +                        +   +R++A ALITF G LPYRMP +  A L Q+E+ +N
Sbjct:    6 GFGDLLQQAEQLTAEMDCGAELPKVERSIRQIMDAGHRLLTRTAQTSQDASDVKASILLGSK-GFDIPR-ISQKLEGLSAARTFEPLEPVRDTDIHGFLRNERENALLTVIEQTRKNTLEEAEKRHWDSLVNEWEREKQKILNALIGTGHDTLDFPQEQESILGDSINMQG-------RSAMDNVEMAYARQVYQYNEQIVQGGIRPSLVDMFAEVG-------NKLDDDNITEIWRMVKLMTDV-PMATSSSIISSRST-QRMQTAFVNQAKKYLEQSYHKYITATVYGNLQQAQLGGVPGTYHLVRSFLNVR-LPHSTPG-LEDGVVDGHPVWAMMYYCIRCGDLNAALHVAQQAQQNIGEFIVFLQEYMKNEDRRLSPNSETKLRLQYRRSVRTSTDPYKRAVFCIIGCCDFSDVHSEVAEKTEDYLWIKLSQIRFGD-------DAESEEGGST---QDTLTLPQFQTTLSEEYGESHFSAYQQPFLYFEVLLLTAQFEAAIEFLSRIERLRCHAVHVALVLYEMNMLALSQSIQSQLLSKETGDPSPMKRLNFARLVMMYTRKFEGTDPREALQYFYFLRNLRSPQGD-NLFMSCISELVLETREFETLLGR-LERDGTRKPGAIDKFHSDTHKIIAKVAEDSETKGLFEDAVKLYDLAKNPEKVLELMNKLLTQVLSQPPSPHSSKDRLKQMALSIAERYKSQGHEGSR----ATTGTFYLLLDLLAFFDLYHSGSLDQALDIIRHLKLIPLSLD--TVEQKVSGFRHYADEIRRSLPDILLATMNIL-----YTQYKNAKSAGRQSPLVGRPGTTDDGGKESFTSYLRSQAKALITFAGMLPYRMPGDTNARLVQMEVLMN 830

[Close]

BLAST of Nuclear pore protein vs. TrEMBL
Match: A0A0P6GRK8 (Nuclear pore protein OS=Daphnia magna OX=35525 GN=APZ42_015077 PE=3 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 2.924e-102
Identity = 274/862 (31.79%), Postives = 425/862 (49.30%), Query Frame = 2

Query:   35 LDDLVLQAENIATNLEDD---EVPHVHRNIEQLRKRGEAFSNRAAQN---DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFI--KTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVA----------VARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAG----TLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADD---VLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVS-RLQSKAEFVLSRMPESAEGSLLSCI-------LTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQY---------------SHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLE 2476
            L  LV  AE +A+ L+D    E+P V RN+ Q+ +       R +Q+   + + A LLG+ VG +L   ++  L+ L  I +++ +  I   DI  FLKNERENAIL+ I  T+  + N + ++   +    W+ EK  IL+ L  S     LL+ +L   +   T      I  ++VL  +E+ Y + +  Y D  + G              Q+     N+   S+  ++ R+++      P   + D  +     + + K  +     +LE+ Y  YI+Q +   +  A          + RS       FV  + +    G  LED  V G PVWPL+F CLR G    A+  +KQA + + EF  LLE   ++G    + S+E   KL   YK+ IR S+D +KR  YC++A CDV+D H +V  + DD++W++L  L+                H S+    +  +  Q Q L+ EEYGE HF A + P  Y  +L L   FE A+ F +R + LRCHAVH+AL L++   L + +N+ SPLLSK + D   + R+N+ RLV LYTRKFE++ PKEAL  FY L  + G + D + F  C S L +ES + +LL  R +E DG   QG L+ +     D   ++E V++     G  E A    +LA    +    L  L++ SIS P++    S R+Q+KA     R+   A GSLL  I       L +G F     E     A   + + +L+P+S D   + S +  F+NL + +R   P +L++ M  L +  KY+Q                + +++ +IR +A AL TF G +PYRMP + +A L QL+
Sbjct:    6 LSSLVQAAEQLASQLDDGSLGELPRVERNLRQIMEASNQLWIRTSQSGGQENQGAALLGS-VGLDLPR-VAHKLDVLSTISNFEPLEPIRETDIKGFLKNERENAILAVIEETRRMSFNHAQQMYWDSVKSEWEKEKQQILSALTESGD--ELLDISL--PIAEMTSGGMLPISSRSVLDHQEMAYVKAVMEYNDQTLKGGIKPSLAEKFSQTAQA----FNDQNISDIWDMVRMMVDV----PVKISGDNILKSRGSALIQKAFMNQGRRYLEDRYKSYIRQTVYSNLGAAKLGGIPGTLPLVRS-------FVSARQISRTTG--LEDGFVDGEPVWPLIFYCLRCGDINAALQASKQAGAVVSEFTRLLEELIHSGDRNLSPSMETNAKLM--YKKMIRTSTDPYKRASYCVVAACDVNDDHTEVAQSTDDYLWIKLCQLKEDE----------LAGHDSS---HERVTYSQFQLLVLEEYGERHFKAYQEPFLYFEVLFLTGQFEAAIDFFSRIERLRCHAVHVALALFESQFLALPSNVQSPLLSKENSDKPSMRRLNIARLVMLYTRKFEATDPKEALHYFYFLRGIKGSKGD-SLFTACVSELVLESRNFDLLLGR-LEPDGTRTQGFLNHFKGTQVDTQKIIELVARDSEAKGLHEDAVHLYELAKDDAKVIELLCRLLSGSISQPAAIESESWRVQNKALAFAQRL--KASGSLLPNIAATFFLLLDLGIFFSLYHEEKYHEAFETIAKLRLIPLSPD--EVESRVSNFRNLSDDIRRNIPDVLLATMNILYK--KYKQSKAPRGFVQSRRDDGDTDEFMDQIRKQARALTTFIGMIPYRMPGDTHARLVQLQ 821

[Close]

BLAST of Nuclear pore protein vs. TrEMBL
Match: A0A0R3W7V1 (Nuclear pore protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6386 PE=3 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 9.174e-101
Identity = 275/952 (28.89%), Postives = 449/952 (47.16%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLEDD-EVPHVHRNIEQLRKRGEAF-SNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNS-DKLPNLLNTALNKSVNVYTEENHRFIKTV------------LSKEEIQYARQIACY-VDSL------------VNGNEXXXXXXXXXXXXQSECSPV--NNTRHSEFTEISRLLLRYC--------EFRPN---------CSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQ------ELMSVAVARSDEQYHVAFVETQILPEFDG-----GNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELW-----CNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNG--------------FVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQ-GLLSRYGHVADDV--LEAVSKRFRQTGRTESACDALQLAGKYQE--AAADLAE-LIANSISLPSSHP-------DVSRLQSKAEFVLSRMPE--SAEGSLLSC---------------------ILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSHDY-----------------LVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
             M +L++LV Q++ +   ++ D ++P + R++EQ+   GE   S+R  ++D+KAA+LLG  + Y+L + LS  LESL  I   D        DI +FL+ EREN + ++    K    +    +C ++ + WW  +   IL  L +S   + + +   +  S+   T     F+  +            +SKEE+ YA Q+  Y VDS             VN   L       +L   +    V  + ++ ++F E  RL+ R          +  P+             D ++   + S L    +  A+ HLE E+  Y+Q  +       +L      ++  +  +      + P  D      G+ ED  V G PVWP+++ CLR G  ++A ++A  A++NLG+F ++L  +     C    L +   RK    Y+R ++ S D +KRL+YCL+  CD+ D H DV  ++DDFIWLRL+ +  ++   ++Q   + L  G            QLQ L+ + YGE++F A   PL Y +IL L Q FE ALAFL+R + LRCHAVHLAL+L +  +LL+ T+  +PL+S+ D DP G  R+N +RL+ LYTRKFES +P   ++ +Y L  LP   +                  FV C + L +++   +LL  R+  +DG   Q G + R+  VA  +  +  V++     G+   A     L G+ +   +A  L   L+   +++   +P       ++ RL ++    + R+    S+ G  +S                      +L +  F   +  G  +AAL  +DR  LLP ++ S  I   +  F  L +LVR   P  L+  MR L       + + ++                 L E+R R  ALITF G++PYRMPSEVYA LSQ+E++++
Sbjct:    6 TMDSLEELVEQSDRLLMEIQGDTDLPLITRSLEQMGAYGEKLCSSRGVRSDVKAARLLGPTINYDLPNNLSAKLESLSQIKEVDFAKPKIDMDIHTFLRCERENVLFTATEQAKRAVFDEVDSICRRSTSSWWDRQAAAILTALASSAGPIDSAIFPTVPSSIMADTATGREFLSHIAPIDFSAESQASVSKEELFYANQVDKYLVDSFTTTQTVYLRQISVNSGLLNKPSLYDYLYNTTNAKSVFFDESKQNDFCEFFRLIKRMFSVSAINIDDVGPSETPLLDLPLPPTHDRALEVRSGSSLQSAFLRRAIAHLEAEFATYLQTVVSSNPRQAQLGGCPGVKALVRAFLNVKSPSLQPSGDNDFDCFGDFEDGVVDGKPVWPMIYYCLRCGALQDAASVASDAANNLGDFVQILNTFMIEDRCLPPKL-VANVRK---TYRRLVKTSRDPYKRLVYCLLGCCDLSDAHTDVGQSIDDFIWLRLSQISINDGTTDQQDDVENLTIG------------QLQNLLYDTYGETYFDAWNQPLMYFKILCLSQQFEGALAFLSRIEGLRCHAVHLALLLREMKILLLPTSKQAPLVSRVDSDPSGFRRLNFIRLLLLYTRKFESGNPTLCMNYYYFLHDLPSVTEGKEKTAVASLSGFRVHSLFVQCVAELVIQTGEFDLLLGRLDPDDGALRQAGAIDRFASVAPPISLITTVAEMLEARGQMAQAVSVYLLTGEVRNLLSAVRLTNLLLVGVVAVDDFNPTGNSERQNILRLAAEVGLSVRRLDPITSSVGGTVSSDSEGCRDISPALQSAARTLYYLLDLATFFDLASAGQWQAALDHMDRLGLLPTTAASDEIDVKVAGFAALSDLVRRPIPAALLQLMRCLTAKASTARANEEHGISVGRAPISSSGPSMCLAEVRARTRALITFVGRIPYRMPSEVYARLSQVEMQLS 941

[Close]

BLAST of Nuclear pore protein vs. TrEMBL
Match: A0A293M546 (Nuclear pore protein (Fragment) OS=Ornithodoros erraticus OX=265619 PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 5.053e-100
Identity = 260/856 (30.37%), Postives = 424/856 (49.53%), Query Frame = 2

Query:   32 NLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQ------NDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEA-----ALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLL--QLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAEL---IANSISLPSSHPDVSRLQSKAEFVLSRMPESAEG------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVK---------------YRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLEL 2479
              +DL+ QA+ +  +++   ++P V RN++Q+ + G+    R  Q       D+KA+ LLG+K G++L   +S+ L+SL    +++ I  I+  DI  FLKNERENAILS I  +   TL  S K   +   + W+ EK NILN L+ S +   +++ ++  +  +         ++ +S  EI YAR+I  Y D ++ G      +  L    +S    +++    +  ++       C      +   L    +T  E + G ++A     A  +LE  Y LY+Q  +   ++ A A       +  V   +      G  ED  V G PVW +++ CLR G    A+  A  A +++G+    L  +  +    L+     ++  +Y R +RASSD +KR +YC + GCDV D H +V T V+D++WLRL  +  ++A  E               + Q   L+  +LQ L+ EE+GE+HF A + P  Y ++L L   FE A+ FL+R D+LRCHAVH+A+VL++ NLLL+ +++   +LS  + D   + R+N  RL+  YTRKFES+ P+EAL  FY L +L G   + N FV C S L +E+   E L  ++ E DG T  G +S +      ++EAV++   + G  E A     LAGK++EA   L +L   +A   S P S  +  R+++ A  + +R   +         S L  +L +  F   +  G    AL  + +  LLP S++   ++  +  F    E +R +   +L++ M  L    K                 + +   L  +R +A ALITF G +PYRMP +  A L Q+E+
Sbjct:    8 GFNDLLRQAQQLTADIDGYADLPRVQRNLKQILEEGQQLWARTTQLAPKDTTDVKASILLGSK-GFDLPK-VSQKLDSLSAAKTFEPIEPIHETDIQGFLKNERENAILSVIEKSTKTTLQESDKFYWEVAFNNWQKEKQNILNSLLGSSQ--EVMDVSIPSASLLPDTSIDMKTRSAMSNAEIAYAREIYLYNDQVMQGG----TRPNLAGRCKSMAKDIDDKNAVDLWDM------VCHL----TEVPLQTANDTYGERTSGTLQAVFIRQARKYLERSYLLYMQMIVFGNLNQA-ALGGVPGTLNLVRGYLNVRLPSGRSEDGIVEGHPVWAVIYYCLRCGEVEAALEAANMAGNSIGDISSYLSEYLQSPDHRLNPSSEGQVRLQYVRSVRASSDQFKRAVYCFLGGCDVADDHPEVATKVEDYLWLRLCQVYLNDAEGE---------------VSQHDHLMLSRLQTLLLEEHGETHFDAYRQPFLYFKVLFLTAQFEAAIDFLSRLDNLRCHAVHIAIVLYEANLLLIPSSIHVAILSAQNGDAPPMRRLNFARLLMTYTRKFESTDPREALQYFYFLRNLKGLHSE-NLFVACVSELVLETREFETLLGKI-EADGSTKAGAISCFLGDTHRIVEAVAQDSEKRGLYEDAVKLYDLAGKHEEAVRLLNKLLGQVAPQCSTPGSTRE--RIEALAIEIATRYRTNGSSASTDATSTLYLLLDLVTFFNQAHAGKKTQALETMQKLNLLPFSTEEVEVK--VTNFSLFAEEIRRILADVLLATMNLLHTQFKELRSGAASGTTTFGGRGKDTEGQLQYLRTQARALITFAGTIPYRMPGDTNARLVQMEV 823

[Close]

BLAST of Nuclear pore protein vs. TrEMBL
Match: A0A2R5LLL6 (Nuclear pore protein OS=Ornithodoros turicata OX=34597 PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 1.352e-99
Identity = 260/860 (30.23%), Postives = 421/860 (48.95%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQ------NDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTAL-------NKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFI-QELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQ----SLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDV-SRLQSKAEFVLSRMPESAEG------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQY-----------------SHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLEL 2479
            DL+ QA+ +  +++   ++P V RN++Q+ + G+    R  Q       D+KA+ LLG+K G++L   +S+ L+SL V  +++ I  I   DI  FL+NERENAILS I  +   TL  S K       + W+ EK NILN L+ S +   +++ ++       + S+N+ T       ++ +S  EI YAR++  Y + +V G         +   L S C  +      +       ++ Y    P  +A D +    T + L    +  A  +LE  Y LY+Q  +   L   A+       ++   F+  ++ P    G  ED  V G PVW +++ CLR G    A+  A +A +++G+    L  +  +    L+     ++  +Y R +RASSD +KR +YC++ GCDV D H DV T V+D++WLRL  +                 H  +  +E  Q    +L +LQ L+ EE+GE+HF A   P  Y ++L L   FE A+ FL+R D+LRCHAVH+A+VL++ NLLL  +++   +LS  + D     R+N  RL+  YTRKFES+ P+EAL  FY L +L G   + N FV C S L +E+   E L  + +E DG    G +  +      ++EAV+    + G  E A     LAGK++EA   L +L+   +   S+      R+++ A  +  R   +         S L  +L +  F   +  G    AL  + +  LLP S++   + + +  F    E +R +   +L++ M  L    +Y++                  +   L+ +R +A ALITF G +PYRMP +  A L Q+E+
Sbjct:   10 DLLQQAQQLTADIDGYADLPRVQRNLKQILEEGQQLWARTTQLAPKDTTDVKASILLGSK-GFDLPK-VSQKLDSLSVAKTFEPIEPIQETDIQGFLRNERENAILSVIEESTKTTLQESDKFYWDVAFNNWQKEKQNILNSLLGSSQ--EVMDVSIPSASLLPDTSINMKT-------RSTMSNAEIAYAREVFLYNEQVVQGG--------MRPNLASRCKAMAKEIDDKNAVDLWDMVCYLTEVPLQTARD-TYAERTSAVLQAVFIRQARKYLERSYMLYMQMIVFGNLNQAALGGVPGTLNLVRGFLNVRLPP----GRSEDGIVEGHPVWAVIYYCLRCGEVEAALEAANKAGNSVGDIASYLSEYLQSPDHRLNPSSEGQVRLQYARSVRASSDQFKRAVYCILGGCDVTDDHPDVATKVEDYLWLRLCQV-----------------HLDDAEVEASQHDHLTLSRLQTLLLEEHGETHFDAYHQPFLYFKVLFLTAQFEAAIDFLSRLDNLRCHAVHIAIVLYESNLLLTPSSIHVAILSAQNGDSPPTRRLNFARLLMTYTRKFESTDPREALQYFYFLRNLKGLHSE-NLFVACISELVLETREFEALLGK-LEADGSRKHGAVDCFLGDTQRIVEAVATDSEKRGLYEDAVKLYDLAGKHEEAVRLLNKLLGQVVPQQSTAGSTRERVETLAVEIAKRYRTNGSSASTDTMSTLYLLLDLATFFNQAHSGKKTQALETMQKLNLLPFSTE--EVETKVTNFSLFTEEIRCILADVLLATMNLLH--TQYKELRSGGTSGTAMLSGRGKDTEGQLLYLRMQARALITFAGMIPYRMPGDTNARLVQMEV 822

[Close]

BLAST of Nuclear pore protein vs. Ensembl Cavefish
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:103041044])

HSP 1 Score: 299.671 bits (766), Expect = 9.624e-89
Identity = 254/870 (29.20%), Postives = 424/870 (48.74%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRA----AQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNV---YTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDS-------ELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRM------PESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSH-----------------DYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +     +L+ QAE +A   E   E+PHV RN+++L++ GE   +R     +Q+  D+KA+ LLG++ G ++   +S+ LESL    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ + +       AL+ S +V   +  +     ++ L   E+ Y RQI  + + +VNG+        +   L   C+ V ++   +      L+++           D+ +V   D+       E+    V  AL  LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW L++ CLR G    A+ +  +A   LG+F    + + N+    L+     KL   Y+R +R S+D +KR +YCLI  CD+ D H +V    +D++WL+L  +   +              GS+   ++  +L QLQK + E+YGESHF A++ P  Y ++L L   FE A+AFL R + LR HAVH+ALVL++  LLL S+   + LLS+   DP  + R+N +RL+ LYTRKFE++ P+EAL  FY L +   HQ + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +LA    K  E    L   +   +S P S+ +  RL++ A  +  R        E +  S    +L +  F      G I+ A   ++R +L+P+S D  S+   +  F+N  + VR     +L++ M  L     + QY                   D    +R++A ALITF G +PYRM  +  A L Q+E+ +N
Sbjct:    2 DAEGFGELLQQAEQLAAETEAVSELPHVERNLQELQQAGERLRSRTLTRTSQDTADVKASILLGSR-GLDIFH-ISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGE------DALDFSQDVEPSFVSDVGAPGRSALDSVEVAYGRQIYVFNEKIVNGH--------VQPSLGDLCASVADSLDDKNVSDMWLMVKQMT--------DVLLVPAKDTLKSRVAVEMQMAFVRQALTFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVNSFLNIKLPGPLPG--MQDGEVEGHPVWALIYYCLRCGDLSAAMQVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLNQVCFDD-------------DGSSAPQDRL-TLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKFEATDPREALQYFYFLRNEKDHQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVSAPQSNKE--RLKNMALGIAERFRTNGVAGEKSVDSTFYLLLDLMTFFDEYHAGHIDLAYDVIERLKLVPLSQD--SVEERVAAFRNFSDEVRHNLSEVLLATMNIL-----FTQYKRLKGATAGTPGRPQRTLEDRDSLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN 820

[Close]

BLAST of Nuclear pore protein vs. Ensembl Cavefish
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:103041044])

HSP 1 Score: 218.009 bits (554), Expect = 1.071e-59
Identity = 167/530 (31.51%), Postives = 264/530 (49.81%), Query Frame = 2

Query:  788 ELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT--LSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRM------PESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTL 2335
            E+    V  AL  LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW L++ CLR G    A+ +  +A   LG+F    + + N+    L+     KL   Y+R +R S+D +KR +YCLI  CD+ D H +V    +D++WL+L  +   +              GS+   ++  +L QLQK + E+YGESHF A++ P  Y ++L L   FE A+AFL R + LR HAVH+ALVL++  LLL S+   + LLS+   DP  + R+N +RL+ LYTRKFE++ P+EAL  FY L +   HQ + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +LA    K  E    L   +   +S P S+ +  RL++ A  +  R        E +  S    +L +  F      G I+ A   ++R +L+P+S D  S+   +  F+N  + VR     +L++ M  L
Sbjct:  219 EMQMAFVRQALTFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVNSFLNIKLPGPLPG--MQDGEVEGHPVWALIYYCLRCGDLSAAMQVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLNQVCFDD-------------DGSSAPQDRL-TLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKFEATDPREALQYFYFLRNEKDHQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVSAPQSNKE--RLKNMALGIAERFRTNGVAGEKSVDSTFYLLLDLMTFFDEYHAGHIDLAYDVIERLKLVPLSQD--SVEERVAAFRNFSDEVRHNLSEVLLATMNIL 726

HSP 2 Score: 73.1738 bits (178), Expect = 7.917e-13
Identity = 56/195 (28.72%), Postives = 105/195 (53.85%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRA----AQN--DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNV---YTEENHRFIKTVLSKEEIQYARQ 577
            +     +L+ QAE +A   E   E+PHV RN+++L++ GE   +R     +Q+  D+KA+ LLG++ G ++   +S+ LESL    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ + +       AL+ S +V   +  +     ++ L   E+ Y RQ
Sbjct:    2 DAEGFGELLQQAEQLAAETEAVSELPHVERNLQELQQAGERLRSRTLTRTSQDTADVKASILLGSR-GLDIFH-ISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGE------DALDFSQDVEPSFVSDVGAPGRSALDSVEVAYGRQ 188

[Close]

BLAST of Nuclear pore protein vs. Ensembl Sea Lamprey
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:30172])

HSP 1 Score: 285.034 bits (728), Expect = 2.235e-84
Identity = 236/859 (27.47%), Postives = 393/859 (45.75%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFI----QELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAG--TLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSS----HPDVSRLQSKAEFVLSRM------PESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQ--------------YSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +M    +L+ QAE +A  +E   E+P V RN+++++  GE   +R          D+KA+ LLG+K G ++S+ +S  LESL  + +++ +  +   DI  FLKNER+N++ S+I  ++  T   + K         W+ EK  ILN L+ S++  ++ + A    +++ T+      ++ +   EI YARQ+  Y + +V          +   + +           S    ++ +LL   +   +C           + ++    V  AL +LE  Y  Y+   +    Q+     V  + +  H +F+  ++ P   G  L+D  V   PVW +L+ CLR G    A+++A ++   LGEF   L+ +  +    LS     +L T Y+R +R  +D +KR ++CLI  CDV D H DV    +DF+WLRL  +                   + +G +   SL QLQ  + EEYGE+HF A + P  Y ++L L   FE A+AFL R + LR HAVH+AL L +  LLL      + LLS+   DP  + R+NL+RL+ LYTRKFE++ P+EAL  FY L +                                 E+DG+     +   G +  +  E           T        + G   +    +  + AN I + S+    H +  RL++ A  +  R        +   G+    +L +  F      G ++ A+  ++R +L+P+  DS   R A   F+N  + VR+  P +L++ M  L    KYR+               + D   ++R +A  L+ F+G +PYRM  +  A L Q+E  +N
Sbjct:    2 DMEGFGELLQQAEQLAAEIEGVSELPQVERNLQEIQLAGERLRSRTLTRTSHDAADVKASILLGSK-GLDISN-ISHRLESLSAVTTFEPLEPVRDTDIKGFLKNERDNSLFSAIEESRRRTFAQAEKYHWDNMLVEWEQEKQRILNTLLGSEE--DMFDLAPEAELSILTDTAPPG-RSSMDSTEIAYARQVYVYNEKIVQAQIRPSLVEMFGGVAEKLDDKNVIELWSMVQHMTDVLLVPAKDTLSC---------RVNKDMQSAFVRQALLYLEQSYKNYVMTTVYGNLQQAKLGGVPGTLQLIH-SFINIKLPPHLPG--LQDGEVDSHPVWAVLYYCLRCGDVTAALSVANRSQHQLGEFVGWLQEYAQSQDRMLSPTSANRLRTHYRRAVRNGTDPYKRAVHCLIGRCDVTDFHGDVAEKTEDFLWLRLHQVSFEEE--------------AGLGTQDRISLPQLQTQLLEEYGETHFSAGQQPFLYFQVLFLTAQFEAAVAFLFRVERLRAHAVHVALALHELKLLLQPPLQAAQLLSREPNDPGPVRRLNLVRLLMLYTRKFEATDPREALQYFYFLRA---------------------------------EKDGQGENMFMRCVGELVIETREVC---------TSITVHIFFMCGWRHKNIHVVMYMNANLIPVVSTQGALHSNRDRLKTMALGIAERYRTLHISTDKRIGATFYLLLDLMTFFEEYHAGQVDRAMNVMERLKLVPLDPDSIDERQAA--FRNFSDEVRNSLPDVLLATMNIL--LTKYRRAKAVGGGTPARPQRTADDMDAKLRRQAQVLLMFSGVVPYRMVGDTNARLVQMESLMN 783

[Close]

BLAST of Nuclear pore protein vs. Ensembl Sea Lamprey
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:30172])

HSP 1 Score: 261.536 bits (667), Expect = 1.568e-75
Identity = 186/601 (30.95%), Postives = 301/601 (50.08%), Query Frame = 2

Query:   23 NMHNLDDLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFI----QELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAG--TLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTC 1786
            +M    +L+ QAE +A  +E   E+P V RN+++++  GE   +R          D+KA+ LLG+K G ++S+ +S  LESL  + +++ +  +   DI  FLKNER+N++ S+I  ++  T   + K         W+ EK  ILN L+ S++  ++ + A    +++ T+      ++ +   EI YARQ+  Y + +V          +   + +           S    ++ +LL   +   +C           + ++    V  AL +LE  Y  Y+   +    Q+     V  + +  H +F+  ++ P   G  L+D  V   PVW +L+ CLR G    A+++A ++   LGEF   L+ +  +    LS     +L T Y+R +R  +D +KR ++CLI  CDV D H DV    +DF+WLRL  +                   + +G +   SL QLQ  + EEYGE+HF A + P  Y ++L L   FE A+AFL R + LR HAVH+AL L +  LLL      + LLS+   DP  + R+NL+RL+ LYTRKFE++ P+EAL  FY L +    Q + N F+ C
Sbjct:    2 DMEGFGELLQQAEQLAAEIEGVSELPQVERNLQEIQLAGERLRSRTLTRTSHDAADVKASILLGSK-GLDISN-ISHRLESLSAVTTFEPLEPVRDTDIKGFLKNERDNSLFSAIEESRRRTFAQAEKYHWDNMLVEWEQEKQRILNTLLGSEE--DMFDLAPEAELSILTDTAPPG-RSSMDSTEIAYARQVYVYNEKIVQAQIRPSLVEMFGGVAEKLDDKNVIELWSMVQHMTDVLLVPAKDTLSC---------RVNKDMQSAFVRQALLYLEQSYKNYVMTTVYGNLQQAKLGGVPGTLQLIH-SFINIKLPPHLPG--LQDGEVDSHPVWAVLYYCLRCGDVTAALSVANRSQHQLGEFVGWLQEYAQSQDRMLSPTSANRLRTHYRRAVRNGTDPYKRAVHCLIGRCDVTDFHGDVAEKTEDFLWLRLHQVSFEEE--------------AGLGTQDRISLPQLQTQLLEEYGETHFSAGQQPFLYFQVLFLTAQFEAAVAFLFRVERLRAHAVHVALALHELKLLLQPPLQAAQLLSREPNDPGPVRRLNLVRLLMLYTRKFEATDPREALQYFYFLRAEKDGQGE-NMFMRC 570

HSP 2 Score: 55.4546 bits (132), Expect = 4.249e-8
Identity = 38/138 (27.54%), Postives = 66/138 (47.83%), Query Frame = 2

Query: 2117 GSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQ--------------YSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            G+    +L +  F      G ++ A+  ++R +L+P+  DS   R A   F+N  + VR+  P +L++ M  L    KYR+               + D   ++R +A  L+ F+G +PYRM  +  A L Q+E  +N
Sbjct:  672 GATFYLLLDLMTFFEEYHAGQVDRAMNVMERLKLVPLDPDSIDERQA--AFRNFSDEVRNSLPDVLLATMNIL--LTKYRRAKAVGGGTPARPQRTADDMDAKLRRQAQVLLMFSGVVPYRMVGDTNARLVQMESLMN 805

[Close]

BLAST of Nuclear pore protein vs. Ensembl Yeast
Match: NIC96 (Linker nucleoporin component of the nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes to nucleocytoplasmic transport and NPC biogenesis; forms stable associations with three FG-nucleoporins (Nsp1p, Nup57p, and Nup49p) [Source:SGD;Acc:S000001898])

HSP 1 Score: 111.309 bits (277), Expect = 1.738e-25
Identity = 194/889 (21.82%), Postives = 368/889 (41.39%), Query Frame = 2

Query:   35 LDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAF--SNRAAQNDIKAAKLLGNK-VGYELSSGLSKTLESLHVI-PSYDGISHINIEDIPSFLKNERENAILSSI-NLTKNNTLNISYKLCEKTKADWWKGEKNNIL---NLLVNSDK----------LPNLLNTALNKSVNVYTEENHRFI---KTVLSKEEIQYARQIACYVDSL-VNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVM-GVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGT------LSIEQTRKLATEYKRHIRAS--SDCWKRLIYCLIAGCDVDDVHKDVLT-TVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRT----------HQGLLSRYGHVADD------VLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISL-----PSSHPD---------VSRLQSKAEF---VLSRMPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAV------KYRQYSHDYLVE-IRNRASALITFTGQLPYRMPSEVYANLSQLELEI 2485
            L++L+  ++N+ +     E+  +  +I +LR+R       N+A+++  KA  LL N  + +E      K L++   + P+   I  I  E++  +++ ++E  IL SI  L    T +    +      DW +  KN ++    +L+   K          L   L +  NK  N+      R       +L ++   YAR +  + +S   NGN        +     S  S  N TR+++  E  ++L        +  + D++IV            E    +LE ++  Y     ++ M+  +A +  +   +F++T++        + + TV+ GVP+W L+F  LR+G  +EA+ +  +  +N+ +  +    +  A        L +E + KL TEY +HI++S   D ++  +Y LI  CD+   +   +T +++D++W+ L  ++  +A               N  + +  SL   Q +I   YG S F        Y + LLL  ++  A+ +   F  +   AVHLA+ L    L  + ++  + L  K   D      I    ++  YT+ F  S P+ A++   +++   G  D     V        E V     F+ ++ + GR            Q LL    HV D+      + E  ++R  + GR   +    QLA +Y      +  L+++++S      P   PD         ++R  +   F    +SR        +   +L I            +  L+ ++   LLP S D  S R   + F NL + +    P LL+  +  +   +      KY+  +    ++ ++N A   + + G + YRMP E Y+ L  +++ +
Sbjct:   22 LNELLESSDNLPS--ASSELGSIQVSINELRRRVFQLRSKNKASKDYTKAHYLLANSGLSFEDVDAFIKDLQTNQFLEPNPPKI--IESEELEFYIRTKKEENILMSIEQLLNGATKDFDNFINHNLNLDWAQ-HKNEVMKNFGILIQDKKTVDHKKSISSLDPKLPSWGNKGNNILNSNESRLNVNENNILREKFENYARIVFQFNNSRQANGN------FDIANEFISILSSANGTRNAQLLESWKIL-------ESMKSKDINIV------------EVGKQYLEQQFLQYTDNLYKKNMNEGLATNVNKIK-SFIDTKLKKADKSWKISNLTVINGVPIWALIFYLLRAGLIKEALQVLVENKANIKKVEQSFLTYFKAYASSKDHGLPVEYSTKLHTEYNQHIKSSLDGDPYRLAVYKLIGRCDLSRKNIPAVTLSIEDWLWMHLMLIKEKDA--------------ENDPVYERYSLEDFQNIIIS-YGPSRFSN-----YYLQTLLLSGLYGLAIDYTYTFSEM--DAVHLAIGLASLKLFKIDSS--TRLTKKPKRD------IRFANILANYTKSFRYSDPRVAVEYLVLITLNEGPTD-----VELCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQPLL----HVRDEKEFLHTITEQAARRADEDGRIYDSILLYQLAEEYDIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIYFDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMELLDLLPFS-DELSARKKAQDFSNLDDNIVKNIPNLLIITLSCISNMIHILNESKYQSSTKGQQIDSLKNVARQCMIYAGMIQYRMPRETYSTLINIDVSL 839

[Close]

BLAST of Nuclear pore protein vs. Ensembl Nematostella
Match: EDO41551 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3U8])

HSP 1 Score: 283.493 bits (724), Expect = 3.255e-83
Identity = 240/869 (27.62%), Postives = 409/869 (47.07%), Query Frame = 2

Query:   26 MHNLDDLVLQAENIATNLEDD-EVPHVHRNIEQLRKRGEAFSNRAA-----QNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLL---NTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQE-LMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQT--RKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLT--HLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNG---FVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADD---VLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISL---PSSHPDVSRLQSKAEFVLSRMPESAEG--------SLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYR------------QYSHDYLVE-----IRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            M N  DL+ QAE +  +++   E+P + RN+ QL + G+   +R++     + D+KA+ LLG+K G+++   LS+ L+ L    +++ I  +   DI  FL+NERENAILS+I   + +T   S K          + EK  I N L+ + +    L         S+N++        ++ L   E+ YARQ+  + ++ V G         L +  + E   V +     F    + L      R +      S       E     +E A + LE  Y  Y+Q+ + + L S  +      + +     +I        LED  + G P+WPL++ C+R G    A+        +L +F +    + N+    I  +   K+  +Y+R +R S D +KR +YCL+  CD+ D H+++ T  +D++WL+L+   +  S+A  E                    +L QLQ L+ E++GE+HF A + P  Y  +L L   FE A+ FL+R +  R HAVH+A+ L++  LL VS +L + LL+     PQ   ++N  RL+  YTRKFE + P+EAL  FY+L ++      P+G   F+ C S L +E+   E+L  + +E +G    G + ++     D   ++E V+K   + G  E A     LA  + +    + +LI+  +S    P S  D  RL + A  +  R    A+G        S    +L + +F         + AL  + + +L+P+SS+  ++   +  F+   + +R + P +L++ M  L    KYR            +   D  +E     +R +A +L+TF G +PYRMP +  A L Q+E+ +N
Sbjct:    1 MSNFSDLLQQAEQLTADMDSGWELPRIDRNLHQLAEAGQRLLSRSSTTAGERADVKASILLGSK-GFDVPK-LSEKLDQLDTTKTFEPIEPVRETDIQGFLRNERENAILSAIEEARKSTFAQSKKYQWSCMESELEQEKEKIFNSLLGAQESVEFLPEPEVFSASSLNMHG-------RSALDATELAYARQVYIHNEAAVTGMPHNIVDGFLEVADRLEEKSVRD-----FWPFIKDLGEIGHSRESPHKIRFS------PEFQVQFLERARHFLEERYLRYVQETVYDNLQSAQLGGVPGTFPLVKSFLKIKLPHGAQGLEDGDLDGTPIWPLIYYCMRCGDPDSALQAVGYIPQHLSDFKDFFREYINSDRRRINPSTESKVRLQYRRSVRTSQDPFKRAVYCLVGHCDLADNHQELATKTEDYLWLKLSLVSVDQSDAQDEM-------------------TLDQLQILLLEQFGETHFGAYQQPFLYFMVLFLTGQFEAAVEFLSRVEFFRSHAVHIAISLYEMGLLAVSESLQTQLLTTDPSTPQPFRQLNFARLIMSYTRKFEMTDPREALQYFYLLRNI----KRPHGGDLFMECVSELVLETREFEMLLGK-LEPNGTRKPGCIDKFQRDRQDTQAIIERVAKDTEEKGLFEEAIRLYDLAKNHDKTIELMNKLISQVVSTCGAPQSPRD--RLHNMAVEIADRY--RAQGHNASQSRMSTFFLLLDLMQFFDLYHGNQTDTALDVIQKLKLVPLSSE--TVEERVAAFRQYNDEIRRVLPDVLLATMNIL--YTKYRGTKSSGQSPLLDRRRDDGGMEQLRMILRRQARSLLTFAGLIPYRMPGDTNARLVQMEVLMN 817

[Close]

BLAST of Nuclear pore protein vs. Ensembl Medaka
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:101173220])

HSP 1 Score: 298.13 bits (762), Expect = 4.115e-88
Identity = 250/849 (29.45%), Postives = 417/849 (49.12%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQT--RKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSR------MPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYS------------HDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++   +S+ LE+L    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ + +     N  +  S   +  E     ++ L   E+ YARQI  + + +VNG+        +H  L   C+ V  +   +      L+++         A D ++   T  E+    V  ALN LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW +++ CLR G    A+ +  +    LG+F    + + N+    +  T   KL   Y+R +R S+D +KR +YCLI  CD++D H +V    +D++WL+L  +   +              GS+   ++  +L QLQK + E+YGESHF A++ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS+   DP  +  +N +RL+ LYTRKFES+ P+EAL  FY L +    Q + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +LA    K  E    L   +   +S P S+ +  RL++ A  +  R        E    S    +L +  F      G ++ A   ++R +LLP+S +  S+   +  F+N  + VR     +L++ M  L    K  + +             D  V++R++A ALITF G +PY M  +  A L Q+EL +N
Sbjct:    8 ELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTPHDAADVKASILLGSR-GLDIFH-ISQRLETLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFNQDVEPS---FVSEVTIPGRSALDSVEVAYARQIYIFNEKIVNGH--------IHPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAKD-TLKSRTSVEMQMAFVRQALNVLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPG--MQDGEVEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSPDRRLCPTSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDINDNHGEVADKTEDYLWLKLNQVCFDD-------------DGSSSPQDRL-TLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFLFRVERLRCHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRHLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIISKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVSAPQSNKE--RLKNTAVAIAERYRCQGIAGEKGVDSTFYLLLDLMTFFDEYHAGHVDRAYDIMERLKLLPLSQE--SVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRAQRSLEDRDVQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN 820

[Close]

BLAST of Nuclear pore protein vs. Ensembl Medaka
Match: nup93 (nucleoporin 93 [Source:NCBI gene;Acc:101173220])

HSP 1 Score: 283.493 bits (724), Expect = 5.471e-83
Identity = 245/854 (28.69%), Postives = 406/854 (47.54%), Query Frame = 2

Query:   41 DLVLQAENIATNLED-DEVPHVHRNIEQLRKRGEAFSNRAAQN------DIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLY-IQQFIQELMSVAVARSDEQYHV--AFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQT--RKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLA---GKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSR------MPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSH-----------------DYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            +L+ QAE +A   E   E+PHV RN++++++ GE   +R          D+KA+ LLG++ G ++   +S+ LE+L    +++ +  +   DI  FLKNER+NA+LS+I  ++  T  ++ +   ++    W+  K  +L+ L+ + +     N  +  S   +  E     ++ L   E+ YARQ    +  +V                                +++ +LL          A D ++   T  E+    V  ALN LEN Y  Y +      L    +      Y +  +F+  ++     G  ++D  V G PVW +++ CLR G    A+ +  +    LG+F    + + N+    +  T   KL   Y+R +R S+D +KR +YCLI  CD++D H +V    +D++WL+L  +   +              GS+   ++  +L QLQK + E+YGESHF A++ P  Y ++L L   FE A+AFL R + LRCHAVH+ALVL++  LLL S+   + LLS+   DP  +  +N +RL+ LYTRKFES+ P+EAL  FY L +    Q + N F+ C S L +ES   ++L  R +E+DG    G++ ++      ++  V+      G  E A    +LA    K  E    L   +   +S P S+ +  RL++ A  +  R        E    S    +L +  F      G ++ A   ++R +LLP+S +  S+   +  F+N  + VR     +L++ M  L     + QY                   D  V++R++A ALITF G +PY M  +  A L Q+EL +N
Sbjct:    8 ELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTPHDAADVKASILLGSR-GLDIFH-ISQRLETLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFNQDVEPS---FVSEVTIPGRSALDSVEVAYARQNVSDMWLMVK-------------------------------QMTDVLL--------VPAKD-TLKSRTSVEMQMAFVRQALNVLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPG--MQDGEVEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSPDRRLCPTSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDINDNHGEVADKTEDYLWLKLNQVCFDD-------------DGSSSPQDRL-TLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFLFRVERLRCHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRHLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE-NMFMRCVSELVIESREFDMLLGR-LEKDGSRKPGVIDKFAGDTRAIISKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVSAPQSNKE--RLKNTAVAIAERYRCQGIAGEKGVDSTFYLLLDLMTFFDEYHAGHVDRAYDIMERLKLLPLSQE--SVEERVAAFRNFSDEVRHNLSEVLLATMNIL-----FTQYKRLKGAPAGTPGRAQRSLEDRDVQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN 789

[Close]

BLAST of Nuclear pore protein vs. Planmine SMEST
Match: SMESG000033256.1 (SMESG000033256.1)

HSP 1 Score: 1597.79 bits (4136), Expect = 0.000e+0
Identity = 817/821 (99.51%), Postives = 817/821 (99.51%), Query Frame = 2

Query:   26 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSLLSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKYRQYSHDYLVEIRNRASALITFTGQLPYRMPSEVYANLSQLELEIN 2488
            MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCS FDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSLLSCILTIGRFIFSS EGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVK RQYSHDYLVEIRNRASALITFTGQL YRMPSEVYANLSQLELEIN
Sbjct:    1 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSTFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSLLSCILTIGRFIFSSTEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKNLPELVRSMFPGLLVSAMRTLREAVKNRQYSHDYLVEIRNRASALITFTGQLSYRMPSEVYANLSQLELEIN 821

[Close]

BLAST of Nuclear pore protein vs. Planmine SMEST
Match: SMESG000049351.1 (SMESG000049351.1)

HSP 1 Score: 1333.55 bits (3450), Expect = 0.000e+0
Identity = 693/717 (96.65%), Postives = 693/717 (96.65%), Query Frame = 2

Query:   26 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSLLSCILTIGRFIFSSMEG 2176
            MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKL                     NSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCS FDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQ KAEFVLSRMPESAEGSLLSCILTIGRFIFSS EG
Sbjct:    1 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKL--------------------FNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSTFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQLKAEFVLSRMPESAEGSLLSCILTIGRFIFSSTEG 697

[Close]

BLAST of Nuclear pore protein vs. Planmine SMEST
Match: SMESG000049351.1 (SMESG000049351.1)

HSP 1 Score: 1325.84 bits (3430), Expect = 0.000e+0
Identity = 690/717 (96.23%), Postives = 690/717 (96.23%), Query Frame = 2

Query:   26 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNEXXXXXXXXXXXXQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMXXXXXXXXXXXHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCXXXXXXXXXXXXXXFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSLLSCILTIGRFIFSSMEG 2176
            MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKL                        KLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCS FDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQ KAEFVLSRMPESAEGSLLSCILTIGRFIFSS EG
Sbjct:    1 MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIKAAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERENAILSSINLTKNNTLNISYKLY-----------------------KLPNLLNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKDDKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSTFDLSIVRETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFVETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNLGEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGCDVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQFQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFDHLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVTLYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLELLFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQLAGKYQEAAADLAELIANSISLPSSHPDVSRLQLKAEFVLSRMPESAEGSLLSCILTIGRFIFSSTEG 694

The following BLAST results are available for this feature:

BLAST of Nuclear pore protein vs. Ensembl Human
BLAST of Nuclear pore protein vs. Ensembl Celegans
BLAST of Nuclear pore protein vs. Ensembl Fly
BLAST of Nuclear pore protein vs. Ensembl Zebrafish
BLAST of Nuclear pore protein vs. Ensembl Xenopus
BLAST of Nuclear pore protein vs. Ensembl Mouse
BLAST of Nuclear pore protein vs. UniProt/SwissProt
BLAST of Nuclear pore protein vs. TrEMBL
BLAST of Nuclear pore protein vs. Ensembl Cavefish
BLAST of Nuclear pore protein vs. Ensembl Sea Lamprey
BLAST of Nuclear pore protein vs. Ensembl Yeast
BLAST of Nuclear pore protein vs. Ensembl Nematostella
BLAST of Nuclear pore protein vs. Ensembl Medaka
BLAST of Nuclear pore protein vs. Planmine SMEST

BLAST of Nuclear pore protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
NUP93	8.638e-84	28.41	nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]	[more]
NUP93	5.412e-76	28.77	nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]	[more]
NUP93	4.445e-64	28.78	nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]	[more]
NUP93	4.445e-64	28.78	nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]	[more]
NUP93	2.327e-17	29.71	nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]	[more]

BLAST of Nuclear pore protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
npp-13	4.641e-20	21.78	Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc...	[more]
npp-13	6.174e-20	21.78	Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc...	[more]

BLAST of Nuclear pore protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2


Match Name	E-value	Identity	Description
Nup93-2	2.091e-69	27.84	gene:FBgn0038274 transcript:FBtr0083008	[more]
Nup93-1	2.239e-66	27.54	gene:FBgn0027537 transcript:FBtr0073828	[more]

BLAST of Nuclear pore protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
nup93	1.390e-85	29.32	nucleoporin 93 [Source:NCBI gene;Acc:30172]	[more]
nup93	1.390e-85	29.32	nucleoporin 93 [Source:NCBI gene;Acc:30172]	[more]
nup93	4.858e-54	28.90	nucleoporin 93 [Source:NCBI gene;Acc:30172]	[more]

BLAST of Nuclear pore protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sall3	2.149e-79	29.13	spalt-like transcription factor 3 [Source:Xenbase;...	[more]
sall3	6.169e-79	29.13	spalt-like transcription factor 3 [Source:Xenbase;...	[more]
sall3	3.357e-75	28.50	spalt-like transcription factor 3 [Source:Xenbase;...	[more]
sall3	9.763e-67	27.75	spalt-like transcription factor 3 [Source:Xenbase;...	[more]
sall3	1.305e-66	27.41	spalt-like transcription factor 3 [Source:Xenbase;...	[more]

BLAST of Nuclear pore protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4


Match Name	E-value	Identity	Description
Nup93	4.458e-85	28.75	nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]	[more]
Nup93	4.458e-85	28.75	nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]	[more]
Nup93	4.458e-85	28.75	nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]	[more]
Nup93	5.989e-65	29.06	nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]	[more]

BLAST of Nuclear pore protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q7ZX96\|NUP93_XENLA	1.631e-87	29.09	Nuclear pore complex protein Nup93 OS=Xenopus laev...	[more]
sp\|Q6NX12\|NUP93_XENTR	6.529e-87	29.33	Nuclear pore complex protein Nup93 OS=Xenopus trop...	[more]
sp\|A5PJZ5\|NUP93_BOVIN	2.588e-86	29.05	Nuclear pore complex protein Nup93 OS=Bos taurus O...	[more]
sp\|Q66HC5\|NUP93_RAT	2.760e-84	28.99	Nuclear pore complex protein Nup93 OS=Rattus norve...	[more]
sp\|Q8BJ71\|NUP93_MOUSE	3.118e-84	28.75	Nuclear pore complex protein Nup93 OS=Mus musculus...	[more]

BLAST of Nuclear pore protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1S3KGV4	5.665e-104	30.53	Nuclear pore protein OS=Lingula unguis OX=7574 GN=...	[more]
A0A0P6GRK8	2.924e-102	31.79	Nuclear pore protein OS=Daphnia magna OX=35525 GN=...	[more]
A0A0R3W7V1	9.174e-101	28.89	Nuclear pore protein OS=Taenia asiatica OX=60517 G...	[more]
A0A293M546	5.053e-100	30.37	Nuclear pore protein (Fragment) OS=Ornithodoros er...	[more]
A0A2R5LLL6	1.352e-99	30.23	Nuclear pore protein OS=Ornithodoros turicata OX=3...	[more]

BLAST of Nuclear pore protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
nup93	9.624e-89	29.20	nucleoporin 93 [Source:NCBI gene;Acc:103041044]	[more]
nup93	1.071e-59	31.51	nucleoporin 93 [Source:NCBI gene;Acc:103041044]	[more]

BLAST of Nuclear pore protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
nup93	2.235e-84	27.47	nucleoporin 93 [Source:NCBI gene;Acc:30172]	[more]
nup93	1.568e-75	30.95	nucleoporin 93 [Source:NCBI gene;Acc:30172]	[more]

BLAST of Nuclear pore protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
NIC96	1.738e-25	21.82	Linker nucleoporin component of the nuclear pore c...	[more]

BLAST of Nuclear pore protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO41551	3.255e-83	27.62	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Nuclear pore protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
nup93	4.115e-88	29.45	nucleoporin 93 [Source:NCBI gene;Acc:101173220]	[more]
nup93	5.471e-83	28.69	nucleoporin 93 [Source:NCBI gene;Acc:101173220]	[more]

BLAST of Nuclear pore protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000033256.1	0.000e+0	99.51	SMESG000033256.1	[more]
SMESG000049351.1	0.000e+0	96.65	SMESG000049351.1	[more]
SMESG000049351.1	0.000e+0	96.23	SMESG000049351.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30006639 ID=SMED30006639|Name=Nuclear pore protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2537bp
CAAAACTTTTATTCATCATTGAAATATGCACAATTTAGATGATTTAGTTT
TACAAGCTGAGAATATTGCTACTAATTTGGAAGATGATGAAGTTCCTCAT
GTTCATCGAAATATTGAGCAACTTAGAAAACGAGGAGAAGCGTTTTCTAA
TAGAGCTGCTCAAAATGACATCAAAGCAGCAAAATTGTTAGGAAATAAAG
TTGGATATGAATTGTCATCAGGATTGTCTAAAACATTAGAATCTTTACAT
GTTATACCTTCGTATGATGGAATATCTCATATTAATATTGAAGATATTCC
CAGTTTTCTTAAAAACGAACGAGAAAATGCAATTCTTTCATCTATTAATC
TAACTAAAAATAATACTTTAAATATAAGTTATAAGTTATGTGAGAAAACA
AAAGCTGATTGGTGGAAAGGAGAAAAAAATAATATTCTTAATTTATTAGT
TAACTCAGATAAACTTCCAAATTTATTAAATACAGCACTAAATAAGTCTG
TCAATGTTTACACTGAAGAAAATCATCGTTTTATTAAGACAGTTTTATCT
AAAGAAGAAATTCAATACGCAAGACAAATTGCATGCTATGTTGATAGTCT
TGTGAATGGAAATGAGTTAAAAGATGATAAATCCCTTCTTCATTTGTTAT
TGCAGTCTGAATGTTCTCCTGTAAATAATACTCGACACTCCGAGTTCACA
GAAATATCCCGTTTGTTATTGCGTTATTGTGAATTTCGACCGAATTGTTC
AGCTTTTGATTTAAGTATTGTTCGTGAAACAGACAGTGAATTGTCTAAGG
GAATGGTTGAGGCCGCACTTAATCATTTAGAGAATGAATATTGGTTATAC
ATCCAACAATTTATTCAAGAATTAATGTCAGTTGCTGTTGCTCGTAGTGA
TGAACAATATCATGTGGCATTCGTCGAAACTCAAATTTTACCAGAATTCG
ATGGAGGAAATCTAGAAGATGAAACTGTAATGGGAGTACCAGTCTGGCCG
TTGCTATTCGTCTGCTTGCGTTCAGGCCATTACAGAGAAGCAGTTACGAT
CGCAAAGCAAGCATCGAGCAATCTAGGTGAATTCCACGAACTACTAGAAT
TGTGGTGTAATGCTGGAACACTTTCAATTGAACAAACTCGAAAACTTGCA
ACTGAATATAAACGACACATCCGAGCCAGTTCTGACTGTTGGAAACGTCT
TATCTACTGCTTGATCGCAGGGTGTGACGTAGATGACGTTCACAAAGACG
TTTTAACAACTGTAGATGATTTCATTTGGCTGCGATTAACACATTTAAGA
CACAGCAACGCCATGCAAGAAGAACAGTTACAACAACAGAAATTGAAGCA
TGGCAGCAATATAGGGATAGAACAGTTCCAGTCGTTACTGCAACTCCAGA
AATTGATTTCAGAGGAATATGGGGAATCTCATTTTTGTGCCAACAAAAAT
CCATTGACTTATTGTCGGATTCTCCTTCTTTGCCAGATGTTTGAACCGGC
TTTGGCGTTTCTTACCCGATTTGACCATTTGAGATGTCACGCTGTCCATT
TGGCGCTGGTTTTGTGGCAATGCAATTTGCTTCTCGTCTCGACCAATCTT
GACTCACCTTTATTGAGCAAAAGTGACGAGGATCCTCAAGGCTTATCAAG
AATCAATTTGATGCGTCTCGTCACGTTATACACTCGGAAATTCGAGTCCA
GCCATCCGAAAGAGGCGCTGGATTTATTCTATGTCCTATCGAGTTTGCCG
GGACATCAGGACGATCCGAATGGATTCGTTACATGCGCCAGCAGTCTCGC
CGTTGAGAGCGTCTCATTGGAGTTGCTGTTCTCTCGCGTGATGGAGGAAG
ACGGTCGAACTCATCAGGGCTTACTGTCGAGATACGGCCATGTCGCTGAC
GATGTGCTGGAGGCGGTTTCCAAGCGGTTCCGACAGACCGGCCGTACTGA
ATCCGCTTGTGACGCGCTGCAATTGGCTGGGAAATATCAAGAGGCTGCGG
CTGATCTTGCTGAATTGATCGCCAATTCGATATCTCTACCGAGTAGTCAT
CCGGATGTGTCCAGGCTGCAATCGAAGGCGGAATTCGTGCTCAGTCGGAT
GCCTGAGTCTGCCGAAGGGTCATTGTTGTCCTGTATTCTTACTATTGGTC
GTTTCATATTCTCCAGTATGGAAGGGGATATTGAAGCTGCACTGGCAGCG
TTAGATCGCACACAATTGCTACCGGTTAGCTCAGATTCTGGATCGATTCG
ATCTGCTATCGAGATGTTCAAAAATCTCCCGGAATTGGTCCGATCGATGT
TTCCGGGGTTGCTCGTGTCTGCCATGCGTACTCTTCGTGAGGCTGTCAAA
TATCGACAATATTCTCACGATTATCTTGTTGAGATTCGCAACCGAGCTTC
CGCATTAATTACCTTTACTGGTCAATTACCGTATCGGATGCCGTCGGAAG
TTTATGCAAATCTCAGCCAATTAGAACTTGAGATTAACTGATTATTTGTT
GTATAAAATATATAGATGGGTTTTCGCTTCTTTTTCA

protein sequence of SMED30006639-orf-1

>SMED30006639-orf-1 ID=SMED30006639-orf-1|Name=SMED30006639-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=822bp
MHNLDDLVLQAENIATNLEDDEVPHVHRNIEQLRKRGEAFSNRAAQNDIK
AAKLLGNKVGYELSSGLSKTLESLHVIPSYDGISHINIEDIPSFLKNERE
NAILSSINLTKNNTLNISYKLCEKTKADWWKGEKNNILNLLVNSDKLPNL
LNTALNKSVNVYTEENHRFIKTVLSKEEIQYARQIACYVDSLVNGNELKD
DKSLLHLLLQSECSPVNNTRHSEFTEISRLLLRYCEFRPNCSAFDLSIVR
ETDSELSKGMVEAALNHLENEYWLYIQQFIQELMSVAVARSDEQYHVAFV
ETQILPEFDGGNLEDETVMGVPVWPLLFVCLRSGHYREAVTIAKQASSNL
GEFHELLELWCNAGTLSIEQTRKLATEYKRHIRASSDCWKRLIYCLIAGC
DVDDVHKDVLTTVDDFIWLRLTHLRHSNAMQEEQLQQQKLKHGSNIGIEQ
FQSLLQLQKLISEEYGESHFCANKNPLTYCRILLLCQMFEPALAFLTRFD
HLRCHAVHLALVLWQCNLLLVSTNLDSPLLSKSDEDPQGLSRINLMRLVT
LYTRKFESSHPKEALDLFYVLSSLPGHQDDPNGFVTCASSLAVESVSLEL
LFSRVMEEDGRTHQGLLSRYGHVADDVLEAVSKRFRQTGRTESACDALQL
AGKYQEAAADLAELIANSISLPSSHPDVSRLQSKAEFVLSRMPESAEGSL
LSCILTIGRFIFSSMEGDIEAALAALDRTQLLPVSSDSGSIRSAIEMFKN
LPELVRSMFPGLLVSAMRTLREAVKYRQYSHDYLVEIRNRASALITFTGQ
LPYRMPSEVYANLSQLELEIN*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus
GO:0016020	membrane
GO:0005643	nuclear pore

Vocabulary: **biological process**
Term	Definition
GO:0006913	nucleocytoplasmic transport
GO:0015031	protein transport
GO:0051028	mRNA transport
GO:0006810	transport

Vocabulary: **molecular function**
Term	Definition
GO:0017056	structural constituent of nuclear pore
GO:0005515	protein binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR001627	Semap_dom
IPR007231	Nucleoporin_int_Nup93/Nic96

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	PANTHER	PTHR11225:SF4	NUCLEAR PORE COMPLEX PROTEIN NUP93	coord: 2..820
IPR007231	Nucleoporin interacting component Nup93/Nic96	PFAM	PF04097	Nic96	coord: 250..806 e-value: 2.1E-102 score: 343.6
IPR007231	Nucleoporin interacting component Nup93/Nic96	PANTHER	PTHR11225	NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN	coord: 2..820