SMED30006570
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30006570 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Alignments
SMED30006570 aligns in the following genomic locations:
Homology
BLAST of SMED30006570 vs. Ensembl Human
Match: ZBED9 (zinc finger BED-type containing 9 [Source:HGNC Symbol;Acc:HGNC:13851]) HSP 1 Score: 78.9518 bits (193), Expect = 2.812e-30 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 ++GA SM + +I +AP K+ HC +HRE+LA +IS L VL++ VKI+NY F +C+++ H QLL H ++R L R K+L+R+F++R+E+ V Sbjct: 970 SDGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLV 1080 HSP 2 Score: 49.6766 bits (117), Expect = 2.812e-30 Identity = 28/89 (31.46%), Postives = 46/89 (51.69%), Query Frame = -1 Query: 2009 PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIK 2275 P C+I + L + MKPS LK H H + + +FFE K + L K + ++ N + A+Y ++L +AK + TI + L+K Sbjct: 757 PQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVK 845 HSP 3 Score: 40.4318 bits (93), Expect = 2.812e-30 Identity = 23/74 (31.08%), Postives = 40/74 (54.05%), Query Frame = -2 Query: 1738 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF*F 1959 A + +V LSN+T R I ++ N++E L I + Y++ ++DE IAN L+ +VR++ + F F Sbjct: 860 AAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEFFF 933 HSP 4 Score: 25.409 bits (54), Expect = 2.812e-30 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -2 Query: 2278 TRQYNKEYLKFGFSWTGDGKSL 2343 TR+Y+ Y++FGF DG+ L Sbjct: 734 TRKYDPSYIEFGFVAVIDGEVL 755
BLAST of SMED30006570 vs. Ensembl Human
Match: ZBED9 (zinc finger BED-type containing 9 [Source:HGNC Symbol;Acc:HGNC:13851]) HSP 1 Score: 78.9518 bits (193), Expect = 3.266e-30 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 ++GA SM + +I +AP K+ HC +HRE+LA +IS L VL++ VKI+NY F +C+++ H QLL H ++R L R K+L+R+F++R+E+ V Sbjct: 819 SDGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLV 929 HSP 2 Score: 49.2914 bits (116), Expect = 3.266e-30 Identity = 28/89 (31.46%), Postives = 46/89 (51.69%), Query Frame = -1 Query: 2009 PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIK 2275 P C+I + L + MKPS LK H H + + +FFE K + L K + ++ N + A+Y ++L +AK + TI + L+K Sbjct: 606 PQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVK 694 HSP 3 Score: 40.4318 bits (93), Expect = 3.266e-30 Identity = 23/74 (31.08%), Postives = 40/74 (54.05%), Query Frame = -2 Query: 1738 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF*F 1959 A + +V LSN+T R I ++ N++E L I + Y++ ++DE IAN L+ +VR++ + F F Sbjct: 709 AAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEFFF 782 HSP 4 Score: 25.409 bits (54), Expect = 3.266e-30 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -2 Query: 2278 TRQYNKEYLKFGFSWTGDGKSL 2343 TR+Y+ Y++FGF DG+ L Sbjct: 583 TRKYDPSYIEFGFVAVIDGEVL 604
BLAST of SMED30006570 vs. Ensembl Human
Match: FAM200B (family with sequence similarity 200 member B [Source:HGNC Symbol;Acc:HGNC:27740]) HSP 1 Score: 65.4698 bits (158), Expect = 1.494e-28 Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 1335 NNGAKSMVEIN*GYFARILNVAPN-VKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1643 ++G +M + ++L V N HC +HRE LA+ I L +VL VK++N+ C +IG HT LL+HT +R L + KIL+R+++LR+E+ Sbjct: 296 SDGTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKNAVKVVNFIKGSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEI 405 HSP 2 Score: 46.2098 bits (108), Expect = 1.494e-28 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 1952 EKPI----PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNL---NQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAANSSQD--NSKSNDISKT 2287 EKP P CVI + L +++KPS LK H E H + DK +++F+ K ++ QFL +++ K + ++Y ++ +AK + A T + +I PA + + + KS D KT Sbjct: 76 EKPFENDRPQCVICNNILANESLKPSKLKRHLETQHAELIDKPLEYFQRKKKDIKLSTQFLSCSTAVSE---KALLSSYLVAYRVAKEKIANTAAEKIILPACLDMVRTIFDDKSADKLKT 193 HSP 3 Score: 35.8094 bits (81), Expect = 1.494e-28 Identity = 17/61 (27.87%), Postives = 32/61 (52.46%), Query Frame = -2 Query: 1744 NNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF 1926 +NT I + ++E ML + + +A ++DES I + L+ +VRY + F+ +F Sbjct: 197 DNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVYVRYAWQDDFLEDF 257 HSP 4 Score: 31.9574 bits (71), Expect = 1.494e-28 Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = -1 Query: 1208 EMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGK 1345 E+ F + + L + W K A+L +IFS N L+L LQGK Sbjct: 404 EIHFFLIEKKSHLASIFEDDTWVTKLAYLTDIFSILNELSLKLQGK 449 HSP 5 Score: 28.1054 bits (61), Expect = 1.494e-28 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = -2 Query: 2305 EKKTMKTRQYNKEYLKFGF 2361 +KK + R+YN++YLK+GF Sbjct: 54 KKKKVSARRYNEDYLKYGF 72
BLAST of SMED30006570 vs. Ensembl Human
Match: FAM200B (family with sequence similarity 200 member B [Source:HGNC Symbol;Acc:HGNC:27740]) HSP 1 Score: 65.4698 bits (158), Expect = 1.494e-28 Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 1335 NNGAKSMVEIN*GYFARILNVAPN-VKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1643 ++G +M + ++L V N HC +HRE LA+ I L +VL VK++N+ C +IG HT LL+HT +R L + KIL+R+++LR+E+ Sbjct: 296 SDGTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKNAVKVVNFIKGSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEI 405 HSP 2 Score: 46.2098 bits (108), Expect = 1.494e-28 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 1952 EKPI----PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNL---NQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAANSSQD--NSKSNDISKT 2287 EKP P CVI + L +++KPS LK H E H + DK +++F+ K ++ QFL +++ K + ++Y ++ +AK + A T + +I PA + + + KS D KT Sbjct: 76 EKPFENDRPQCVICNNILANESLKPSKLKRHLETQHAELIDKPLEYFQRKKKDIKLSTQFLSCSTAVSE---KALLSSYLVAYRVAKEKIANTAAEKIILPACLDMVRTIFDDKSADKLKT 193 HSP 3 Score: 35.8094 bits (81), Expect = 1.494e-28 Identity = 17/61 (27.87%), Postives = 32/61 (52.46%), Query Frame = -2 Query: 1744 NNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF 1926 +NT I + ++E ML + + +A ++DES I + L+ +VRY + F+ +F Sbjct: 197 DNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVYVRYAWQDDFLEDF 257 HSP 4 Score: 31.9574 bits (71), Expect = 1.494e-28 Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = -1 Query: 1208 EMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGK 1345 E+ F + + L + W K A+L +IFS N L+L LQGK Sbjct: 404 EIHFFLIEKKSHLASIFEDDTWVTKLAYLTDIFSILNELSLKLQGK 449 HSP 5 Score: 28.1054 bits (61), Expect = 1.494e-28 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = -2 Query: 2305 EKKTMKTRQYNKEYLKFGF 2361 +KK + R+YN++YLK+GF Sbjct: 54 KKKKVSARRYNEDYLKYGF 72
BLAST of SMED30006570 vs. Ensembl Human
Match: ZBED5 (zinc finger BED-type containing 5 [Source:HGNC Symbol;Acc:HGNC:30803]) HSP 1 Score: 81.6481 bits (200), Expect = 6.384e-17 Identity = 75/228 (32.89%), Postives = 107/228 (46.93%), Query Frame = -3 Query: 966 VAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQVS***I*AEKFFKLV*MVL*ICILKRNIL*F*LSQL--IVT-----------RKVH*FTV--KIN*TLPWQN*IYGKRVGNGEVDMFPSFYGFKTSSIGKIDVDTLKSITQRLKNLRLGLKNYFP-NLKNF*WIRYPL 1583 VAP S+HC ++R ALA + L+ VLD+ V+IINY + +CE++G HT LL +T+VR L R K+L RLF+LR E+ V + F+L C+ + L L+ L I T + V FTV K++ +L + + V D FP+ F T +D D +I Q L+ LR L YFP N W+R P Sbjct: 363 VAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVF-----MDSAFRLS-----DCLTNSSWL-LRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMS-SLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPF 578 HSP 2 Score: 27.7202 bits (60), Expect = 6.384e-17 Identity = 16/66 (24.24%), Postives = 35/66 (53.03%), Query Frame = -1 Query: 776 SFIACESRSIVEISFMRRFFKN-KECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTLH 964 S +A + S+++++ + +N E +L F + YP++ + + +LPF T +L GF+ + Sbjct: 586 SLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYY 651 HSP 3 Score: 58.5362 bits (140), Expect = 4.076e-15 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = -1 Query: 1994 EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL----NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2287 + P CV+ + L+ ++ PS L+ H E H YKDK I FF+ L NN K+ + DN+ EA+YN+S IA A TI ++LIKP A + Sbjct: 126 DAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKPPTPKI---VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKD 224 HSP 4 Score: 35.4242 bits (80), Expect = 4.076e-15 Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = -2 Query: 1771 VYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1938 V LSN+T R I + ++E+ L + ++ ++DES ++ A L+ FVRY+ Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYR 296 HSP 5 Score: 28.4906 bits (62), Expect = 4.076e-15 Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = -2 Query: 2290 MDIWLKSGTFKRK----------ESRDCIV------------TINKQKIMKLTKVTNF-NSERTCLEKKTMKTRQYNKEYLKFGFSWTGD 2490 MD+ LK G+ K++ ES D V +++K+ +L++V NS + KK K R+Y++ YL FGF++ G+ Sbjct: 36 MDLLLKQGSLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKP-KRRKYDESYLSFGFTYFGN 124
BLAST of SMED30006570 vs. Ensembl Mouse
Match: Zbed5 (zinc finger, BED type containing 5 [Source:MGI Symbol;Acc:MGI:1919220]) HSP 1 Score: 63.1586 bits (152), Expect = 3.460e-26 Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINYE*MT------FPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 +GA + + G+ +LN +P AHC +H + LA + Q+V+ + +N+ + F Q+C D+ LL HT+ R L R K+L R+F+LRDE+++ Sbjct: 404 TDGAPATLGCQSGFQRLVLNESPKAIGAHCMLHLQTLAMKTLPQDFQEVMKSVLSSVNFVKASSLNSRLFLQLCSDLDEPSKTLLLHTEGRWLSRGKVLKRIFELRDELKM 514 HSP 2 Score: 46.9802 bits (110), Expect = 3.460e-26 Identity = 30/96 (31.25%), Postives = 51/96 (53.12%), Query Frame = -1 Query: 1994 PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKV--VEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2275 P CVI L+ ++MKP+ LK HFE H+ + K ++F +K + L + + G + + V VE +Y ++L IA+ T + L+ P A + Sbjct: 189 PQCVICGVVLSAESMKPNKLKRHFESKHSSFAGKDTNYFRSKADGLKK-ARPDTGSKSNKQNVAAVETSYLVALRIARDMKPHTFAEHLLFPVAKD 283 HSP 3 Score: 35.039 bits (79), Expect = 3.460e-26 Identity = 28/96 (29.17%), Postives = 46/96 (47.92%), Query Frame = -2 Query: 1699 VYLSNNTF*REIIKMPNNVEKMLYSDI--SPSCYYASKIDESIKIANFANLMAFVRY-------------KKIEKFMTNF-*FVSIDQVMKQ*KIS 1938 V LSN+T R I M ++ + +I +P + ++DES +AN LM +VRY K +E+ T F ++D ++Q +IS Sbjct: 300 VSLSNDTVRRRIHDMSADILDQVVQEIKSAPLPICSIQLDESTDVANCLQLMVYVRYINDGDFKDEFLCCKPLERTATALDVFEAVDSFLRQHEIS 395 HSP 4 Score: 27.7202 bits (60), Expect = 3.460e-26 Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = -1 Query: 1211 KFAFLKEIFSSFNCLNLSLQG 1273 K A+L +IF+ N LNLSLQG Sbjct: 536 KVAYLVDIFTILNELNLSLQG 556 HSP 5 Score: 25.7942 bits (55), Expect = 3.460e-26 Identity = 10/41 (24.39%), Postives = 26/41 (63.41%), Query Frame = -2 Query: 2296 KIMKLTKVTNFNSERTCLE-KKTMKTRQYNKEYLKFGFSWT 2415 ++++ ++ N + R ++ +K R+YN+ +L++GF+ T Sbjct: 141 EVLRQCRIANVDHPRPVDHGERNVKRRKYNEGFLQYGFTST 181
BLAST of SMED30006570 vs. Ensembl Mouse
Match: Zmym6 (zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]) HSP 1 Score: 61.6178 bits (148), Expect = 2.209e-12 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYF---ARILNVAPN-VKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 +GA SM + YF ++I +A N V HC +HRE LA ++SP L ++L + +I+++ + +CE++G H L + +VR L R +IL RLF+LR E+++ Sbjct: 904 TDGAASMTD---RYFRLRSKIQEIAKNTVTFTHCFIHREHLAAKKLSPCLHEILLQSSQILSFVKNSASDSQMLTILCEEMGSEHVNLPLNAEVRWLSRGRILTRLFELRHEIEI 1015 HSP 2 Score: 31.5722 bits (70), Expect = 2.209e-12 Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = -1 Query: 1211 FLNDRF-ELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQG 1330 FLN + +L + + +W K A+L +IFS N LN SLQG Sbjct: 1016 FLNQKHSDLARYFHDEEWIAKLAYLADIFSLINKLNSSLQG 1056 HSP 3 Score: 39.6614 bits (91), Expect = 6.041e-8 Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = -1 Query: 2006 CVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENK---LNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKP 2269 CVI E L +++ P +L H + H+ ++K +DFFE K + N LK K L +++ +V+A+Y ++ IA +I + LIKP Sbjct: 692 CVICGEVLPSESVMPVSLSNHLKAKHSDLENKPVDFFEEKSLEMECQNSSLK-KCLLVEES--LVKASYLIAFQIAARNKPFSIAEELIKP 779 HSP 4 Score: 34.2686 bits (77), Expect = 6.041e-8 Identity = 17/62 (27.42%), Postives = 33/62 (53.23%), Query Frame = -2 Query: 1774 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1959 A + + LSN+T I K+ +++E L + S ++A ++DES + L+ +VR+ Sbjct: 793 AGEKMKTIPLSNSTIGCRIKKLSDDIEDQLLQKVRESRWFALQVDESSEATEVPLLLCYVRF 854 HSP 5 Score: 23.0978 bits (48), Expect = 6.041e-8 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = -2 Query: 2305 TRQYNKEYLKFGF 2343 ++ YN EY++FGF Sbjct: 665 SQTYNAEYIRFGF 677
BLAST of SMED30006570 vs. Ensembl Mouse
Match: Zmym6 (zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]) HSP 1 Score: 61.6178 bits (148), Expect = 2.286e-12 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYF---ARILNVAPN-VKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 +GA SM + YF ++I +A N V HC +HRE LA ++SP L ++L + +I+++ + +CE++G H L + +VR L R +IL RLF+LR E+++ Sbjct: 812 TDGAASMTD---RYFRLRSKIQEIAKNTVTFTHCFIHREHLAAKKLSPCLHEILLQSSQILSFVKNSASDSQMLTILCEEMGSEHVNLPLNAEVRWLSRGRILTRLFELRHEIEI 923 HSP 2 Score: 31.5722 bits (70), Expect = 2.286e-12 Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = -1 Query: 1211 FLNDRF-ELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQG 1330 FLN + +L + + +W K A+L +IFS N LN SLQG Sbjct: 924 FLNQKHSDLARYFHDEEWIAKLAYLADIFSLINKLNSSLQG 964 HSP 3 Score: 39.6614 bits (91), Expect = 7.391e-8 Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = -1 Query: 2006 CVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENK---LNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKP 2269 CVI E L +++ P +L H + H+ ++K +DFFE K + N LK K L +++ +V+A+Y ++ IA +I + LIKP Sbjct: 600 CVICGEVLPSESVMPVSLSNHLKAKHSDLENKPVDFFEEKSLEMECQNSSLK-KCLLVEES--LVKASYLIAFQIAARNKPFSIAEELIKP 687 HSP 4 Score: 34.2686 bits (77), Expect = 7.391e-8 Identity = 17/62 (27.42%), Postives = 33/62 (53.23%), Query Frame = -2 Query: 1774 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1959 A + + LSN+T I K+ +++E L + S ++A ++DES + L+ +VR+ Sbjct: 701 AGEKMKTIPLSNSTIGCRIKKLSDDIEDQLLQKVRESRWFALQVDESSEATEVPLLLCYVRF 762 HSP 5 Score: 23.0978 bits (48), Expect = 7.391e-8 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = -2 Query: 2305 TRQYNKEYLKFGF 2343 ++ YN EY++FGF Sbjct: 573 SQTYNAEYIRFGF 585
BLAST of SMED30006570 vs. UniProt/SwissProt
Match: sp|Q6R2W3|SCND3_HUMAN (SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZBED9 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.251e-29 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 ++GA SM + +I +AP K+ HC +HRE+LA +IS L VL++ VKI+NY F +C+++ H QLL H ++R L R K+L+R+F++R+E+ V Sbjct: 970 SDGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLV 1080 HSP 2 Score: 49.6766 bits (117), Expect = 1.251e-29 Identity = 28/89 (31.46%), Postives = 46/89 (51.69%), Query Frame = -1 Query: 2009 PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIK 2275 P C+I + L + MKPS LK H H + + +FFE K + L K + ++ N + A+Y ++L +AK + TI + L+K Sbjct: 757 PQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVK 845 HSP 3 Score: 40.4318 bits (93), Expect = 1.251e-29 Identity = 23/74 (31.08%), Postives = 40/74 (54.05%), Query Frame = -2 Query: 1738 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF*F 1959 A + +V LSN+T R I ++ N++E L I + Y++ ++DE IAN L+ +VR++ + F F Sbjct: 860 AAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEFFF 933 HSP 4 Score: 25.409 bits (54), Expect = 1.251e-29 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -2 Query: 2278 TRQYNKEYLKFGFSWTGDGKSL 2343 TR+Y+ Y++FGF DG+ L Sbjct: 734 TRKYDPSYIEFGFVAVIDGEVL 755
BLAST of SMED30006570 vs. UniProt/SwissProt
Match: sp|P0CF97|F200B_HUMAN (Protein FAM200B OS=Homo sapiens OX=9606 GN=FAM200B PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 6.650e-28 Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 1335 NNGAKSMVEIN*GYFARILNVAPN-VKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1643 ++G +M + ++L V N HC +HRE LA+ I L +VL VK++N+ C +IG HT LL+HT +R L + KIL+R+++LR+E+ Sbjct: 296 SDGTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKNAVKVVNFIKGSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEI 405 HSP 2 Score: 46.2098 bits (108), Expect = 6.650e-28 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 1952 EKPI----PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNL---NQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAANSSQD--NSKSNDISKT 2287 EKP P CVI + L +++KPS LK H E H + DK +++F+ K ++ QFL +++ K + ++Y ++ +AK + A T + +I PA + + + KS D KT Sbjct: 76 EKPFENDRPQCVICNNILANESLKPSKLKRHLETQHAELIDKPLEYFQRKKKDIKLSTQFLSCSTAVSE---KALLSSYLVAYRVAKEKIANTAAEKIILPACLDMVRTIFDDKSADKLKT 193 HSP 3 Score: 35.8094 bits (81), Expect = 6.650e-28 Identity = 17/61 (27.87%), Postives = 32/61 (52.46%), Query Frame = -2 Query: 1744 NNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF 1926 +NT I + ++E ML + + +A ++DES I + L+ +VRY + F+ +F Sbjct: 197 DNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVYVRYAWQDDFLEDF 257 HSP 4 Score: 31.9574 bits (71), Expect = 6.650e-28 Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = -1 Query: 1208 EMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGK 1345 E+ F + + L + W K A+L +IFS N L+L LQGK Sbjct: 404 EIHFFLIEKKSHLASIFEDDTWVTKLAYLTDIFSILNELSLKLQGK 449 HSP 5 Score: 28.1054 bits (61), Expect = 6.650e-28 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = -2 Query: 2305 EKKTMKTRQYNKEYLKFGF 2361 +KK + R+YN++YLK+GF Sbjct: 54 KKKKVSARRYNEDYLKYGF 72
BLAST of SMED30006570 vs. UniProt/SwissProt
Match: sp|Q49AG3|ZBED5_HUMAN (Zinc finger BED domain-containing protein 5 OS=Homo sapiens OX=9606 GN=ZBED5 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.840e-16 Identity = 75/228 (32.89%), Postives = 107/228 (46.93%), Query Frame = -3 Query: 966 VAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQVS***I*AEKFFKLV*MVL*ICILKRNIL*F*LSQL--IVT-----------RKVH*FTV--KIN*TLPWQN*IYGKRVGNGEVDMFPSFYGFKTSSIGKIDVDTLKSITQRLKNLRLGLKNYFP-NLKNF*WIRYPL 1583 VAP S+HC ++R ALA + L+ VLD+ V+IINY + +CE++G HT LL +T+VR L R K+L RLF+LR E+ V + F+L C+ + L L+ L I T + V FTV K++ +L + + V D FP+ F T +D D +I Q L+ LR L YFP N W+R P Sbjct: 363 VAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVF-----MDSAFRLS-----DCLTNSSWL-LRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMS-SLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPF 578 HSP 2 Score: 27.7202 bits (60), Expect = 2.840e-16 Identity = 16/66 (24.24%), Postives = 35/66 (53.03%), Query Frame = -1 Query: 776 SFIACESRSIVEISFMRRFFKN-KECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTLH 964 S +A + S+++++ + +N E +L F + YP++ + + +LPF T +L GF+ + Sbjct: 586 SLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYY 651 HSP 3 Score: 58.5362 bits (140), Expect = 1.814e-14 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = -1 Query: 1994 EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL----NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2287 + P CV+ + L+ ++ PS L+ H E H YKDK I FF+ L NN K+ + DN+ EA+YN+S IA A TI ++LIKP A + Sbjct: 126 DAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKPPTPKI---VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKD 224 HSP 4 Score: 35.4242 bits (80), Expect = 1.814e-14 Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = -2 Query: 1771 VYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1938 V LSN+T R I + ++E+ L + ++ ++DES ++ A L+ FVRY+ Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYR 296 HSP 5 Score: 28.4906 bits (62), Expect = 1.814e-14 Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = -2 Query: 2290 MDIWLKSGTFKRK----------ESRDCIV------------TINKQKIMKLTKVTNF-NSERTCLEKKTMKTRQYNKEYLKFGFSWTGD 2490 MD+ LK G+ K++ ES D V +++K+ +L++V NS + KK K R+Y++ YL FGF++ G+ Sbjct: 36 MDLLLKQGSLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKP-KRRKYDESYLSFGFTYFGN 124
BLAST of SMED30006570 vs. UniProt/SwissProt
Match: sp|A4Z944|ZBED5_CANLF (Zinc finger BED domain-containing protein 5 OS=Canis lupus familiaris OX=9615 GN=ZBED5 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.908e-16 Identity = 75/228 (32.89%), Postives = 107/228 (46.93%), Query Frame = -3 Query: 966 VAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQVS***I*AEKFFKLV*MVL*ICILKRNIL*F*LSQL--IVT-----------RKVH*FTV--KIN*TLPWQN*IYGKRVGNGEVDMFPSFYGFKTSSIGKIDVDTLKSITQRLKNLRLGLKNYFP-NLKNF*WIRYPL 1583 VAP S+HC ++R ALA + L+ VLD+ V+IINY + +CE++G HT LL +T+VR L R K+L RLF+LR E+ V + F+L C+ + L L+ L I T + V FTV K++ +L + + V D FP+ F T +D D +I Q L+ LR L YFP N W+R P Sbjct: 364 VAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVF-----MDSAFRLS-----DCLTNSSWL-LRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMS-SLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRSTLLKYFPVTNDNNTWVRNPF 579 HSP 2 Score: 27.335 bits (59), Expect = 3.908e-16 Identity = 16/66 (24.24%), Postives = 35/66 (53.03%), Query Frame = -1 Query: 776 SFIACESRSIVEISFMRRFFKN-KECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTLH 964 S +A + S+++++ + +N E +L F + YP++ + + +LPF T +L GF+ + Sbjct: 587 SLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYY 652 HSP 3 Score: 58.5362 bits (140), Expect = 3.340e-14 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = -1 Query: 1994 EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL----NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2287 + P CV+ + L+ ++ PS L+ H E H YKDK I FF+ L NN K+ + DN+ EA+YN+S IA A TI ++LIKP A + Sbjct: 127 DAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKPPTPKI---VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKD 225 HSP 4 Score: 35.4242 bits (80), Expect = 3.340e-14 Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = -2 Query: 1771 VYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1938 V LSN+T R I + ++E+ L + ++ ++DES ++ A L+ FVRY+ Sbjct: 242 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYR 297 HSP 5 Score: 27.7202 bits (60), Expect = 3.340e-14 Identity = 26/91 (28.57%), Postives = 44/91 (48.35%), Query Frame = -2 Query: 2290 MDIWLKSGTFKRK----------ESRDCIV------------TINKQKIMKLTKVTNFNSER--TCLEKKTMKTRQYNKEYLKFGFSWTGD 2490 MD+ LK G+ K++ ES D V +++K+ +L++V +S T KK K R+Y++ YL FGF++ G+ Sbjct: 36 MDLLLKQGSLKQEVESFCYQIVSESNDQKVGILQSENEQLQPSVSKKSEGELSRVKFMSSSNKITTFSKKP-KRRKYDESYLSFGFTYFGN 125
BLAST of SMED30006570 vs. UniProt/SwissProt
Match: sp|Q4R6P1|F200A_MACFA (Protein FAM200A OS=Macaca fascicularis OX=9541 GN=FAM200A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-15 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 1329 NVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1574 N HC +HREAL + ISP L VL + VKI+N+ +C +IG+ HT LLFHT+VR L + K+L+R+++LR+E+ + Sbjct: 235 NALWNHCFIHREALVSKEISPSLMDVLKKAVKIVNFIKGSSLNSRLLEILCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYI 322 HSP 2 Score: 31.9574 bits (71), Expect = 1.015e-15 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -1 Query: 1208 WFCKFAFLKEIFSSFNCLNLSLQGK 1282 W K A+L +IF N LNL +QGK Sbjct: 340 WVTKLAYLSDIFGILNELNLKIQGK 364
BLAST of SMED30006570 vs. TrEMBL
Match: A0A3P9J5Y5 (Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.233e-57 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = -3 Query: 1335 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIIN------YE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1643 +GA +M G ARI VA + + HCC+HRE LA ++ L+ VLDE VKI+N F +CE++G HT+LLFHT+VR L R K+L RLF+LRDEV Sbjct: 294 TDGATAMTGKQKGLVARIRAVALSAVTTHCCIHREQLAVKKMPQCLKSVLDESVKIVNKIKAKPLNSRLFKAVCEEMGSEHTKLLFHTEVRWLSRGKVLTRLFELRDEV 402 HSP 2 Score: 73.1738 bits (178), Expect = 1.233e-57 Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = -1 Query: 2000 EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFL---KVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2287 E P P CV+ E L + MKP+ LK H E H +Y+ K I FFE K + L + + ++ +N K EA+Y +SLLIAK +I + L+KPAA Sbjct: 94 EDPKPHCVLCYETLANEAMKPAKLKRHLETKHKEYQGKPIGFFERKRDELKKHMMKETSQFFAPGENAKATEASYKVSLLIAKAGKPHSIGENLVKPAA 192 HSP 3 Score: 54.6842 bits (130), Expect = 1.233e-57 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = -2 Query: 1774 AAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1992 AAK++A ++ K +R+ LSN+T R I M +VE L + + S +++ ++DESI + N ANL+ FVRY Sbjct: 191 AAKMMANILFGGKAGDEINRIPLSNDTVQRRIKAMAESVEHQLVTRLRQSQFFSLQLDESIDLGNEANLLCFVRY 265 HSP 4 Score: 43.1282 bits (100), Expect = 1.233e-57 Identity = 23/65 (35.38%), Postives = 34/65 (52.31%), Query Frame = -3 Query: 966 IYGKRVGNGEVDMFPSFYGFKTSSIGKIDVDTLKSITQRLKNLRLGLKNYFPNLK-NF*WIRYPL 1157 ++ R+ EVD FP+ F ++ +D T+ S Q L++L L YFP L +F WIR P Sbjct: 465 LWCGRLDRREVDSFPTLADFLLAAGEDVDGSTVASFKQHLQDLHSQLGIYFPELDASFDWIRNPF 529 HSP 5 Score: 40.817 bits (94), Expect = 1.233e-57 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = -1 Query: 1202 FLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFI 1330 FL+ EL N ++ +W K A+L +IFS N LN++LQGK + Sbjct: 405 FLHHSDELYNRMHDFQWLAKLAYLADIFSILNTLNVALQGKTV 447 HSP 6 Score: 30.4166 bits (67), Expect = 1.233e-57 Identity = 12/34 (35.29%), Postives = 20/34 (58.82%), Query Frame = -1 Query: 797 KECALTSFR*QMHHAYPALTEKVLEYILPFPTSY 898 +E LT F + +P L + L+ ++PFPT+Y Sbjct: 564 REKGLTDFWLHIQPEHPELADSALKLLMPFPTTY 597 HSP 7 Score: 21.1718 bits (43), Expect = 1.233e-57 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = -1 Query: 1733 IHDEFLICQ 1759 +HDEFL C+ Sbjct: 271 LHDEFLFCR 279
BLAST of SMED30006570 vs. TrEMBL
Match: A0A3B1IGP9 (Uncharacterized protein OS=Astyanax mexicanus OX=7994 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.262e-54 Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = -3 Query: 1329 NLSALIRS*NNRRYLL*IILCKR--TKLESMNLY--------------------KNNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1742 NL A +R +NR I+ CK TK + ++ +GA++M+ G A + VAP S HC +HREALA R+S L+ VLDE VKI+N+ + F +CE++ H QLL HT+VR L K+L RLF+LRDEV++ Sbjct: 221 NLLAFVRYEHNREIFEDILFCKPLPTKTTAEAIFDVLNALIVSNGIEWSKCVGVSTDGARAMMGQRSGVIASVKAVAPLATSVHCSLHREALAAKRMSRDLKIVLDEAVKIVNFIKSRPLQSRLFRVLCEEMASSHVQLLLHTEVRWLSHGKVLARLFELRDEVRI 386 HSP 2 Score: 70.4774 bits (171), Expect = 1.262e-54 Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 2000 KPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL---NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2284 +P+PLCV+ SE L + +K + L+ H E H++Y K ++FFENKL + + L++ T D+ K VEA+Y ++ LIAK TI + LI PAA Sbjct: 59 EPLPLCVVCSEVLANEALKTTKLRRHLETKHSEYASKPVEFFENKLKEYQSRKKTLELACSGT-DHAKAVEASYRVAQLIAKAGKPHTIGESLILPAA 155 HSP 3 Score: 55.4546 bits (132), Expect = 1.262e-54 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 1771 LIAAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1998 L AAK + VM+ K + + + LS+NT R I +M ++V + L + S +YA ++DES IAN +NL+AFVRY+ Sbjct: 152 LPAAKEMVSVMLGEKPCKQLNLISLSDNTVERRINEMAHDVTQQLIKRVRESRFYAIQLDESTDIANLSNLLAFVRYE 229 HSP 4 Score: 50.8322 bits (120), Expect = 1.262e-54 Identity = 60/220 (27.27%), Postives = 101/220 (45.91%), Query Frame = -1 Query: 779 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIEFMAKELVMEKWIC------FLLFMGLKQVRLVKLMSIL*NL*HSV*RIYVWA*RTIFL-I*KIFNG*DIRYSFI----------------ACESRSIVEI---SFMRRFFKNKECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTL 1354 L E++ L+ FEL + +W K ++L +IF+ N LNLSLQGK + + H + KIE K+L M W + F L L K + L N +V R V +++ + + F D+ +S+I A E ++++ S ++ F K +L +F YP L++K + +++PFPT+YL GF++ Sbjct: 380 LRDEVRIFLLDSNFELSDRFTDFEWLAKLSYLSDIFTHLNGLNLSLQGKSVTAF-----HVQNKIEATIKKLDM--WTKRVEQSNYESFDNLSDF-LTKENASLPN---AVSRPIVEHLQSLKMQLRDYFPALDVHFSWIENPFVDICQGAFASLSASEEDRLIDLSCDSALKFIFSQK--SLVNFWLHARSEYPDLSDKAVRFLMPFPTTYLCETGFSM 586 HSP 5 Score: 35.8094 bits (81), Expect = 1.262e-54 Identity = 22/66 (33.33%), Postives = 30/66 (45.45%), Query Frame = -2 Query: 2293 MDIWLKSGTFKRKESRDCIVTINKQKIMKLTKVTNFNSERTCLEKKTMKTRQYNKEYLKFGFSWTG 2490 MD WLK+G+ K+ T + ERT K +K R+Y+ EYL GF+ TG Sbjct: 1 MDKWLKTGSLTTKDPEAGPSTSEAATVSV--------PERT---KHKLKRRKYSSEYLALGFTCTG 55
BLAST of SMED30006570 vs. TrEMBL
Match: A0A3B1K5T1 (Uncharacterized protein OS=Astyanax mexicanus OX=7994 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 4.936e-54 Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = -3 Query: 1329 NLSALIRS*NNRRYLL*IILCKR--TKLESMNLY--------------------KNNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1742 NL A +R +NR I+ CK TK ++ ++ +GA++M+ G AR+ VAP S HC +HREALA R+S L+ VLDE VKI+N+ + F +CE++G H QLL HT+VR L R K+L RLF+LRDEV++ Sbjct: 264 NLLAFVRYEHNREIFEDILFCKPLPTKTTAVAIFDVLNAFIVSNGIEWSKCVGVSTDGARAMMGQRSGVIARVKAVAPLATSVHCSLHREALAAKRMSRDLKIVLDEAVKIVNFIKSRPLQSRLFRVLCEEMGSSHVQLLLHTEVRWLSRGKVLARLFELRDEVRI 429 HSP 2 Score: 75.0998 bits (183), Expect = 4.936e-54 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = -1 Query: 2000 KPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL---NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2284 +P+PLCV+ SE L + +KP+ L+ H E H++Y K ++FFENKL + + L++ T DN K VEA+Y ++ LIAK TI + LI PAA Sbjct: 102 EPLPLCVVCSEVLANEALKPTKLRRHLETKHSEYASKPVEFFENKLKEYQSRKKTLELACSGT-DNAKAVEASYRVAQLIAKAGKPHTIGESLILPAA 198 HSP 3 Score: 55.0694 bits (131), Expect = 4.936e-54 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 1771 LIAAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1998 L AAK + VM+ K + + + LS+NT R I +M ++V + L + S +YA ++DES IAN +NL+AFVRY+ Sbjct: 195 LPAAKEMVSVMLGEKPCKQLNLISLSDNTVERRINEMAHDVTQQLIKRVRESRFYAIQLDESTDIANLSNLLAFVRYE 272 HSP 4 Score: 50.0618 bits (118), Expect = 4.936e-54 Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = -1 Query: 779 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIEFMAKELVMEKWIC------FLLFMGLKQVRLVKLMSIL*NL*HSV*RIYVWA*RTIFL-I*KIFNG*DIRYSFI----------------ACESRSIVEI---SFMRRFFKNKECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTL 1354 L E++ L+ FEL + +W K ++L +IF+ N LN+SLQGK + + H + KIE K+L M W + F L L K + L N +V R V +++ + + F D+ +S+I A E ++++ S ++ F K +L +F YP L++K + +++PFPT+YL GF++ Sbjct: 423 LRDEVRIFLLDSNFELSDRFTDFEWLAKLSYLSDIFTHLNGLNISLQGKSVTAF-----HVQNKIEATIKKLDM--WTKRVEQSNYESFDNLSDF-LTKENASLPN---AVSRPIVEHLQSLKMQLRDYFPALDVHFSWIENPFVDICQGAIASLSASEEDRLIDLSCDSALKLIFSQK--SLVNFWLHARSEYPDLSDKAVRFLMPFPTTYLCETGFSM 629 HSP 5 Score: 22.3274 bits (46), Expect = 4.936e-54 Identity = 22/84 (26.19%), Postives = 34/84 (40.48%), Query Frame = -2 Query: 2293 AFKIMDIWLKSGTFKRKESRDCIVTINKQKIMKLTKVTNFNSERTCLEKKTMKTRQ--------------YNKEYLKFGFSWTG 2502 +F+ WL SGT K + + +++K M+ + NSE +E +K Y EYL GF+ TG Sbjct: 24 SFQSATCWL-SGTLKEMKKKH---YGSQEKNME-----SLNSEEKSMESLKLKVENKDTPSQFPFPKWTLYCSEYLALGFTCTG 98
BLAST of SMED30006570 vs. TrEMBL
Match: A0A2H8TRY4 (Zinc finger BED domain-containing protein 5 OS=Melanaphis sacchari OX=742174 GN=ZBED5 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 6.798e-50 Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 1329 NGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1640 +GA +M G R+ VAP VK HCC+HREAL R+S ++ L+E VKIIN+ + F +C+D+G H QL+ HT++R L R KIL R F+LRDE++V Sbjct: 292 DGAAAMSGYKTGLLGRVKEVAPQVKWTHCCIHREALVAKRLSEHMKTTLEEVVKIINFIKSRPLQSRLFEVLCKDMGSDHVQLILHTEIRWLSRGKILQRFFELRDEIRV 401 HSP 2 Score: 67.3958 bits (163), Expect = 6.798e-50 Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = -1 Query: 2000 EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLT--DDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2287 ++P P C+I E L+ ++MKPS L+ HFE H ++ KS+DFF KL + KV T NK A+Y ++ L+AK A TI + LI PAA Sbjct: 74 DEPKPQCIICLEILSNESMKPSKLRRHFETKHGEFTSKSLDFFVVKLGEFKKSQKVMKSSTSLSGNKNATLASYEVAQLVAKSGKAHTIAEELILPAA 171 HSP 3 Score: 49.6766 bits (117), Expect = 6.798e-50 Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = -2 Query: 1738 LIAAKIIAKVMIL--AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF*F 1998 L AA ++ K M+ A + V LSNNT R I M N+E+ L++ +S S +A ++DES IA+ ++++ FVR+ ++ +F F Sbjct: 168 LPAAIVLCKTMLGESAAKLISSVPLSNNTIQRRITDMSANIEETLFTRLSTSDKFALQLDESTDIASKSSMLVFVRFIWEKQLFEDFLF 256 HSP 4 Score: 37.3502 bits (85), Expect = 6.798e-50 Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = -2 Query: 2293 WLKSGTFKRK----ESRDCIVTINKQKIMKLTKVTNFNSERTCLEKKTMKT--RQYNKEYLKFGFSWTG 2481 WLKSG+ KR E + + +NK + ++ N R K T+ T R+YN EYL+ GF++ G Sbjct: 4 WLKSGSLKRPLSEIEEDNTVNDMNKVQCTDQHSSSDSN-RRNVNSKSTVGTKVRKYNTEYLQLGFTFAG 71 HSP 5 Score: 37.3502 bits (85), Expect = 6.798e-50 Identity = 24/66 (36.36%), Postives = 31/66 (46.97%), Query Frame = -1 Query: 1157 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIE 1354 L E++ L RF L W + A+L ++F N LNLSLQG +ID H KIE Sbjct: 395 LRDEIRVFLLETRF--VGLLTDFSWLSRIAYLADVFEYLNTLNLSLQGIYID-----VFHVEDKIE 453
BLAST of SMED30006570 vs. TrEMBL
Match: A0A3P9HZ57 (Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.662e-48 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIIN------YE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 +GA +M G ARI VAP+ + HCC+HRE LA ++ L+ VLDE VKI+N F +CE++G HT+LLFHT+VR L R K+L RLF+LRDEV + Sbjct: 305 TDGATAMTGKQKGLVARIRAVAPSAVTTHCCIHREQLAVKKMPQCLKSVLDESVKIVNKIKAKPLNSRLFKAVCEEMGSEHTKLLFHTEVRWLSRGKVLTRLFELRDEVML 415 HSP 2 Score: 73.1738 bits (178), Expect = 7.662e-48 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 2000 WILMDWRW----EKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFL---KVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2311 +I + W E P P CV+ E L K MKP+ LK H E H +Y+ K I FFE K + L + + ++ +N K EA+Y +SLLIAK +I + L+KPAA Sbjct: 74 YIQFGFFWTGEEEDPKPHCVLCYETLANKAMKPAKLKRHLETKHKEYQGKPIGFFERKRDELKKHMMKETSQFFAPGENAKATEASYKVSLLIAKAGKPHSIGENLVKPAA 184 HSP 3 Score: 51.9878 bits (123), Expect = 7.662e-48 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = -2 Query: 1774 AAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1992 AAK++A ++ K +R+ LSN+T R I M +VE L + + S +++ ++DES + N ANL+ FVRY Sbjct: 183 AAKVMAIILFGGKAGDEINRIPLSNDTVQRRIKAMAESVEHQLVTRLRQSQFFSLQLDESTDLGNEANLLCFVRY 257 HSP 4 Score: 40.4318 bits (93), Expect = 7.662e-48 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = -1 Query: 1202 FLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFI 1330 FL+ EL N ++ +W K A+L +IFS N LN++LQGK + Sbjct: 416 FLHHSDELYNRMHDFQWLAKLAYLADIFSILNTLNVALQGKTV 458 HSP 5 Score: 21.1718 bits (43), Expect = 7.662e-48 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = -1 Query: 1733 IHDEFLICQ 1759 +HDEFL C+ Sbjct: 263 LHDEFLFCR 271
BLAST of SMED30006570 vs. Ensembl Cavefish
Match: ENSAMXT00000044261.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000070.1:2279767:2281653:1 gene:ENSAMXG00000037161.1 transcript:ENSAMXT00000044261.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.1301 bits (235), Expect = 7.927e-58 Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = -3 Query: 1329 NLSALIRS*NNRRYLL*IILCKR--TKLESMNLY--------------------KNNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1742 NL A +R +NR I+ CK TK + ++ +GA++M+ G A + VAP S HC +HREALA R+S L+ VLDE VKI+N+ + F +CE++ H QLL HT+VR L K+L RLF+LRDEV++ Sbjct: 221 NLLAFVRYEHNREIFEDILFCKPLPTKTTAEAIFDVLNALIVSNGIEWSKCVGVSTDGARAMMGQRSGVIASVKAVAPLATSVHCSLHREALAAKRMSRDLKIVLDEAVKIVNFIKSRPLQSRLFRVLCEEMASSHVQLLLHTEVRWLSHGKVLARLFELRDEVRI 386 HSP 2 Score: 70.4774 bits (171), Expect = 7.927e-58 Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 2000 KPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL---NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2284 +P+PLCV+ SE L + +K + L+ H E H++Y K ++FFENKL + + L++ T D+ K VEA+Y ++ LIAK TI + LI PAA Sbjct: 59 EPLPLCVVCSEVLANEALKTTKLRRHLETKHSEYASKPVEFFENKLKEYQSRKKTLELACSGT-DHAKAVEASYRVAQLIAKAGKPHTIGESLILPAA 155 HSP 3 Score: 55.4546 bits (132), Expect = 7.927e-58 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 1771 LIAAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1998 L AAK + VM+ K + + + LS+NT R I +M ++V + L + S +YA ++DES IAN +NL+AFVRY+ Sbjct: 152 LPAAKEMVSVMLGEKPCKQLNLISLSDNTVERRINEMAHDVTQQLIKRVRESRFYAIQLDESTDIANLSNLLAFVRYE 229 HSP 4 Score: 50.8322 bits (120), Expect = 7.927e-58 Identity = 60/220 (27.27%), Postives = 101/220 (45.91%), Query Frame = -1 Query: 779 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIEFMAKELVMEKWIC------FLLFMGLKQVRLVKLMSIL*NL*HSV*RIYVWA*RTIFL-I*KIFNG*DIRYSFI----------------ACESRSIVEI---SFMRRFFKNKECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTL 1354 L E++ L+ FEL + +W K ++L +IF+ N LNLSLQGK + + H + KIE K+L M W + F L L K + L N +V R V +++ + + F D+ +S+I A E ++++ S ++ F K +L +F YP L++K + +++PFPT+YL GF++ Sbjct: 380 LRDEVRIFLLDSNFELSDRFTDFEWLAKLSYLSDIFTHLNGLNLSLQGKSVTAF-----HVQNKIEATIKKLDM--WTKRVEQSNYESFDNLSDF-LTKENASLPN---AVSRPIVEHLQSLKMQLRDYFPALDVHFSWIENPFVDICQGAFASLSASEEDRLIDLSCDSALKFIFSQK--SLVNFWLHARSEYPDLSDKAVRFLMPFPTTYLCETGFSM 586 HSP 5 Score: 35.8094 bits (81), Expect = 7.927e-58 Identity = 22/66 (33.33%), Postives = 30/66 (45.45%), Query Frame = -2 Query: 2293 MDIWLKSGTFKRKESRDCIVTINKQKIMKLTKVTNFNSERTCLEKKTMKTRQYNKEYLKFGFSWTG 2490 MD WLK+G+ K+ T + ERT K +K R+Y+ EYL GF+ TG Sbjct: 1 MDKWLKTGSLTTKDPEAGPSTSEAATVSV--------PERT---KHKLKRRKYSSEYLALGFTCTG 55
BLAST of SMED30006570 vs. Ensembl Cavefish
Match: ENSAMXT00000051422.1 (pep primary_assembly:Astyanax_mexicanus-2.0:15:35461191:35465166:-1 gene:ENSAMXG00000032672.1 transcript:ENSAMXT00000051422.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 102.834 bits (255), Expect = 3.102e-57 Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = -3 Query: 1329 NLSALIRS*NNRRYLL*IILCKR--TKLESMNLY--------------------KNNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1742 NL A +R +NR I+ CK TK ++ ++ +GA++M+ G AR+ VAP S HC +HREALA R+S L+ VLDE VKI+N+ + F +CE++G H QLL HT+VR L R K+L RLF+LRDEV++ Sbjct: 264 NLLAFVRYEHNREIFEDILFCKPLPTKTTAVAIFDVLNAFIVSNGIEWSKCVGVSTDGARAMMGQRSGVIARVKAVAPLATSVHCSLHREALAAKRMSRDLKIVLDEAVKIVNFIKSRPLQSRLFRVLCEEMGSSHVQLLLHTEVRWLSRGKVLARLFELRDEVRI 429 HSP 2 Score: 75.0998 bits (183), Expect = 3.102e-57 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = -1 Query: 2000 KPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKL---NNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2284 +P+PLCV+ SE L + +KP+ L+ H E H++Y K ++FFENKL + + L++ T DN K VEA+Y ++ LIAK TI + LI PAA Sbjct: 102 EPLPLCVVCSEVLANEALKPTKLRRHLETKHSEYASKPVEFFENKLKEYQSRKKTLELACSGT-DNAKAVEASYRVAQLIAKAGKPHTIGESLILPAA 198 HSP 3 Score: 55.0694 bits (131), Expect = 3.102e-57 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 1771 LIAAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYK 1998 L AAK + VM+ K + + + LS+NT R I +M ++V + L + S +YA ++DES IAN +NL+AFVRY+ Sbjct: 195 LPAAKEMVSVMLGEKPCKQLNLISLSDNTVERRINEMAHDVTQQLIKRVRESRFYAIQLDESTDIANLSNLLAFVRYE 272 HSP 4 Score: 50.0618 bits (118), Expect = 3.102e-57 Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = -1 Query: 779 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIEFMAKELVMEKWIC------FLLFMGLKQVRLVKLMSIL*NL*HSV*RIYVWA*RTIFL-I*KIFNG*DIRYSFI----------------ACESRSIVEI---SFMRRFFKNKECALTSFR*QMHHAYPALTEKVLEYILPFPTSYL--YGFTL 1354 L E++ L+ FEL + +W K ++L +IF+ N LN+SLQGK + + H + KIE K+L M W + F L L K + L N +V R V +++ + + F D+ +S+I A E ++++ S ++ F K +L +F YP L++K + +++PFPT+YL GF++ Sbjct: 423 LRDEVRIFLLDSNFELSDRFTDFEWLAKLSYLSDIFTHLNGLNISLQGKSVTAF-----HVQNKIEATIKKLDM--WTKRVEQSNYESFDNLSDF-LTKENASLPN---AVSRPIVEHLQSLKMQLRDYFPALDVHFSWIENPFVDICQGAIASLSASEEDRLIDLSCDSALKLIFSQK--SLVNFWLHARSEYPDLSDKAVRFLMPFPTTYLCETGFSM 629 HSP 5 Score: 22.3274 bits (46), Expect = 3.102e-57 Identity = 22/84 (26.19%), Postives = 34/84 (40.48%), Query Frame = -2 Query: 2293 AFKIMDIWLKSGTFKRKESRDCIVTINKQKIMKLTKVTNFNSERTCLEKKTMKTRQ--------------YNKEYLKFGFSWTG 2502 +F+ WL SGT K + + +++K M+ + NSE +E +K Y EYL GF+ TG Sbjct: 24 SFQSATCWL-SGTLKEMKKKH---YGSQEKNME-----SLNSEEKSMESLKLKVENKDTPSQFPFPKWTLYCSEYLALGFTCTG 98
BLAST of SMED30006570 vs. Ensembl Cavefish
Match: ENSAMXT00000057314.1 (pep primary_assembly:Astyanax_mexicanus-2.0:1:4224188:4227217:-1 gene:ENSAMXG00000029268.1 transcript:ENSAMXT00000057314.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 60.4622 bits (145), Expect = 3.219e-19 Identity = 46/124 (37.10%), Postives = 62/124 (50.00%), Query Frame = -3 Query: 1341 TKLESMNL-YKN------NGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRD 1673 T + S N+ YKN +GA SM+ N G+ +R+ AP+ HC +HR ALA + L + L VKI+N+ F Q+CED H LL HT+VR L R K L + L D Sbjct: 225 TYITSHNIPYKNIVACCTDGAASMMGKNKGFNSRLKEKAPHCLVFHCMVHRHALAGKHLCEDLNETLKTVVKIVNFIKARPVNRRIFAQLCED--ETHQTLLLHTEVRWLSRGKFLIKTAYLAD 346 HSP 2 Score: 43.5134 bits (101), Expect = 3.219e-19 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = -1 Query: 2003 CVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNL--NQFLKVKWGL---TDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPA 2269 C+ + L +++KP NLK H H + K +FF K L N+ +K L D+++ A++ SLLIAK + TI + LIKPA Sbjct: 28 CIFCRDKLANESLKPCNLKRHQTTKHPETVGKPKEFFLRKKELLVANRPQNIKDSLLRAGSDHRQATIASFECSLLIAKDKKPHTIGETLIKPA 121 HSP 3 Score: 31.9574 bits (71), Expect = 3.219e-19 Identity = 20/58 (34.48%), Postives = 31/58 (53.45%), Query Frame = -2 Query: 1774 FHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1947 F V LSNNT I +M NVE L + S ++ ++DE+ +A A L+ + +Y Sbjct: 138 FKIVPLSNNTVKDRIDRMAGNVENTLVEKLKTS-PFSIQLDETTTVAEEAILIVYAQY 194
BLAST of SMED30006570 vs. Ensembl Cavefish
Match: ENSAMXT00000037725.1 (pep primary_assembly:Astyanax_mexicanus-2.0:14:29162452:29166863:1 gene:ENSAMXG00000037303.1 transcript:ENSAMXT00000037725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 57.3806 bits (137), Expect = 7.501e-16 Identity = 37/134 (27.61%), Postives = 67/134 (50.00%), Query Frame = -3 Query: 1329 RTKLESMNL-------YKNNGAKSMVEIN*GYFARIL-----NVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1676 +T +E++NL +GA S+V G+ + + A +K HC +H+EAL + ++++D V +N+ + FP EDI + +++HT+VR L R +L R F LR+E+++ Sbjct: 417 KTAVENLNLPWSKLSAVTTDGALSVVGETNGFIGHLKRHLGPDQAAELKHYHCIIHQEALCGKHLH--FKEIMDFVVSAVNFIRARSLKHREFPSFLEDISAAYGDVIYHTEVRWLSRGNVLKRFFALRNEIKL 548 HSP 2 Score: 32.3426 bits (72), Expect = 7.501e-16 Identity = 19/61 (31.15%), Postives = 30/61 (49.18%), Query Frame = -2 Query: 1777 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVR 1959 AK F + LS T I+ + +N L S I+ Y+++ +DES + A L F+R Sbjct: 325 AKDAFKNISLSRTTIQLRIVDLSSNSYCQLQSRINDVTYFSAALDESTDNTDTAQLSIFIR 385 HSP 3 Score: 26.9498 bits (58), Expect = 7.501e-16 Identity = 19/65 (29.23%), Postives = 33/65 (50.77%), Query Frame = -1 Query: 2048 KPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVE----ATYNMSLLIAK 2230 K NL+ H+E H K D + + K+ L + L + G+ + +K E A+Y ++ L+AK Sbjct: 235 KEYNLRRHYETKHPKLADLQGEDRKQKIEALKKQLVSQQGVFEKRRKESEACTIASYRIANLVAK 299 HSP 4 Score: 26.5646 bits (57), Expect = 7.501e-16 Identity = 12/25 (48.00%), Postives = 14/25 (56.00%), Query Frame = -1 Query: 1208 WFCKFAFLKEIFSSFNCLNLSLQGK 1282 W AFL ++ N LNL LQGK Sbjct: 565 WIADLAFLTDLTGLLNELNLKLQGK 589
BLAST of SMED30006570 vs. Ensembl Cavefish
Match: ENSAMXT00000052542.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000549.1:35642:40620:1 gene:ENSAMXG00000033785.1 transcript:ENSAMXT00000052542.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.7582 bits (125), Expect = 4.431e-15 Identity = 36/134 (26.87%), Postives = 64/134 (47.76%), Query Frame = -3 Query: 1329 RTKLESMNL-------YKNNGAKSMVEIN*GYFARIL-----NVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1676 +T +E++NL +GA SMV G+ + + A +K HC +H+EAL + ++++D V +N+ F EDI + +++HT+VR L R +L F LR+E+++ Sbjct: 229 KTAVENLNLPWSKLSAVTTDGAPSMVGETNGFIGHLKRHLGPDQAAELKHYHCIIHQEALCGKHLQ--FKQIMDFVVSAVNFIRARSLNHREFQSFLEDISAAYGDVIYHTEVRWLSRGNVLKIFFALRNEIKL 360 HSP 2 Score: 35.4242 bits (80), Expect = 4.431e-15 Identity = 20/61 (32.79%), Postives = 31/61 (50.82%), Query Frame = -2 Query: 1777 AKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVR 1959 AK F + LS T R I+ + +N L S I+ Y+++ +DES + A L F+R Sbjct: 137 AKDAFKNISLSRTTIQRRIVDLSSNSYCQLQSRINDVTYFSAALDESTDNTDTAQLSIFIR 197 HSP 3 Score: 26.5646 bits (57), Expect = 4.431e-15 Identity = 19/65 (29.23%), Postives = 33/65 (50.77%), Query Frame = -1 Query: 2048 KPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVE----ATYNMSLLIAK 2230 K NL+ H+E H K D + + K+ L + L + G+ + +K E A+Y ++ L+AK Sbjct: 47 KEYNLRRHYETKHPKLADLQGEDRKQKIEALKKQLVSQQGVFEKRRKESEACTIASYRIANLVAK 111 HSP 4 Score: 26.1794 bits (56), Expect = 4.431e-15 Identity = 12/25 (48.00%), Postives = 14/25 (56.00%), Query Frame = -1 Query: 1208 WFCKFAFLKEIFSSFNCLNLSLQGK 1282 W AFL ++ N LNL LQGK Sbjct: 377 WIADLAFLTDLTGLLNELNLKLQGK 401
BLAST of SMED30006570 vs. Ensembl Medaka
Match: ENSORLT00000035028.1 (pep primary_assembly:ASM223467v1:2:7372701:7381259:1 gene:ENSORLG00000027324.1 transcript:ENSORLT00000035028.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 100.523 bits (249), Expect = 1.447e-47 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIIN------YE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 +GA +M G ARI VAP+ + HCC+HRE LA ++ L+ VLDE VKI+N + F +CE++G HT+LLFHT+VR L R K+L RLF+LRDEV + Sbjct: 215 TDGATAMTGKQKGLVARIAAVAPSAVTTHCCIHREQLAVKKMPQCLKSVLDESVKIVNKIKAKQLNSLLFKALCEEMGSEHTKLLFHTEVRWLSRGKVLTRLFELRDEVML 325 HSP 2 Score: 60.8474 bits (146), Expect = 1.447e-47 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = -1 Query: 2000 LTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFL---KVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2248 LT + MKP+ LK H E H +Y+ K I FFE K + L + + ++ +N K EA+Y +SLLIAK +I + L+KPAA Sbjct: 9 LTNEAMKPAKLKRHLETKHKEYQGKPIGFFERKCDELKKHMMKETSQFFAPGENVKATEASYKVSLLIAKAGKPHSIGENLVKPAA 94 HSP 3 Score: 52.7582 bits (125), Expect = 1.447e-47 Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = -2 Query: 1774 AAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1992 AAK++A + K +R+ LSN+T R I M +VE L + + S +++ ++DES + N ANL+ FVRY Sbjct: 93 AAKVMANIFFGGKAGDEINRIPLSNDTVQRRIKAMAESVEHQLVTHLRQSQFFSLQLDESTDLGNEANLLCFVRY 167 HSP 4 Score: 37.3502 bits (85), Expect = 1.447e-47 Identity = 25/81 (30.86%), Postives = 41/81 (50.62%), Query Frame = -1 Query: 1088 FLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFIDSQ*R*TEHYRGKIEFMAKELVMEKWICFLLFMGLKQV 1330 FL+ EL + ++ +W K A+L +I S N LN++LQGK + + + + A L ME W C + +G K+ Sbjct: 326 FLHHSDELYDRMHDFQWLAKLAYLADILSILNTLNVALQGKTVTI-------FNVQDKIKATRLKMELW-CGQIHLGTKRT 398 HSP 5 Score: 20.7866 bits (42), Expect = 1.447e-47 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = -1 Query: 1733 IHDEFLICQ 1759 +HDEFL C+ Sbjct: 173 LHDEFLFCR 181
BLAST of SMED30006570 vs. Ensembl Medaka
Match: ENSORLT00000032459.1 (pep primary_assembly:ASM223467v1:8:14240678:14247355:1 gene:ENSORLG00000024991.1 transcript:ENSORLT00000032459.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 82.0333 bits (201), Expect = 6.461e-35 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = -3 Query: 1335 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1643 ++GA SM + G +IL++AP K HC +HRE LA ++SP +V+D VK IN+ F Q+CE + H QLL+H++VR L R +L R+F+LR+E+ Sbjct: 247 SDGAASMTGRHRGVIKQILDLAPEAKWTHCFLHRENLA-KKMSPEFHEVMDVTVKTINFIKSNAVNSRCFAQLCEGMEADHVQLLYHSEVRWLSRGLVLTRIFELRNEI 354 HSP 2 Score: 54.6842 bits (130), Expect = 6.461e-35 Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = -1 Query: 1994 KPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2284 +P CV L+ + +KPS LK H E H K K +D+F+ K + L + LT D K ++A+Y ++ +A+ + A TI + L+ PAA + Sbjct: 32 EPRAQCVECGLTLSNEALKPSKLKRHLETKHPKLIGKPVDYFKRKDDGLQMQRRSIVSLTGDAKCALKASYLVARRVAQSKKAFTIAEELVLPAAVD 128 HSP 3 Score: 39.6614 bits (91), Expect = 6.461e-35 Identity = 31/118 (26.27%), Postives = 55/118 (46.61%), Query Frame = -2 Query: 1657 LIAAKIIAKVMI--LAKQTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKFMTNF*FVS--IDQVMKQ*KISVMNNFMQENKIGID 1998 L AA + + MI A + + LSN+ I + +++E+ L I S +++ ++DES + N A L+ FVRY+ + F + + M+N+ EN G+D Sbjct: 123 LPAAVDMCREMIGEAAAKKLKTIPLSNDIVSHRIADIASDIEQQLLERIRKSPFFSLQLDESTDVTNAALLLVFVRYRWDSSLQEDILFCGELPTRATAEECFRCMDNYFTEN--GLD 238 HSP 4 Score: 32.7278 bits (73), Expect = 6.461e-35 Identity = 18/44 (40.91%), Postives = 25/44 (56.82%), Query Frame = -1 Query: 1208 FKFLNDR-FELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGK 1336 F FL D+ L + + K A+L +IFS N LN+SLQG+ Sbjct: 355 FSFLTDKKSPLAHHYTNATFIAKLAYLSDIFSLLNQLNISLQGR 398
BLAST of SMED30006570 vs. Ensembl Medaka
Match: ENSORLT00000041706.1 (pep primary_assembly:ASM223467v1:11:1823079:1829783:-1 gene:ENSORLG00000030200.1 transcript:ENSORLT00000041706.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 89.7373 bits (221), Expect = 5.356e-30 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 1335 GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIIN------YE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1607 G R+ VAP+ + HCC+HRE LA ++ L+ VLDE VKI N F +CE++G HT+LLFHT+VR L R K+L RLF+LRDEV Sbjct: 285 GLVVRVHAVAPSAAATHCCIHREQLALKKMPQCLKSVLDESVKIANKIKAKPLNSRLFKAVCEEMGSEHTKLLFHTEVRWLSRGKVLTRLFELRDEV 381 HSP 2 Score: 39.2762 bits (90), Expect = 5.356e-30 Identity = 22/65 (33.85%), Postives = 32/65 (49.23%), Query Frame = -3 Query: 966 IYGKRVGNGEVDMFPSFYGFKTSSIGKIDVDTLKSITQRLKNLRLGLKNYFPNLK-NF*WIRYPL 1157 ++ R+ E D FP+ F ++ +D T S Q L++L L YFP L +F WIR P Sbjct: 444 LWCGRLDRREFDSFPTLADFLLAAGEDVDGSTAASFKQHLQDLHLQRGIYFPELDASFDWIRNPF 508 HSP 3 Score: 38.5058 bits (88), Expect = 5.356e-30 Identity = 17/43 (39.53%), Postives = 27/43 (62.79%), Query Frame = -1 Query: 1202 FLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFI 1330 FL+ EL + ++ W K +L +IFS+ N LN++LQGK + Sbjct: 384 FLHHSDELYDRMHDFHWLAKLPYLADIFSTLNTLNVALQGKTV 426 HSP 4 Score: 25.0238 bits (53), Expect = 5.356e-30 Identity = 10/31 (32.26%), Postives = 18/31 (58.06%), Query Frame = -1 Query: 797 ALTSFR*QMHHAYPALTEKVLEYILPFPTSY 889 +LT F + +P L + L+ ++PF T+Y Sbjct: 528 SLTDFWFHIQPEHPQLADSALKLLMPFLTTY 558 HSP 5 Score: 65.4698 bits (158), Expect = 9.027e-16 Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = -1 Query: 2000 RWEKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFL---KVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2293 ++ P P CV+ E L + MKP+ LK H E H +Y+ K I FE K + L + + ++ +N K EA+Y +SLL AK +I + L+KPAA Sbjct: 77 KYHNPKPHCVLGYETLANEAMKPAKLKRHLETKHKEYQGKPIGVFERKRDELKKHMMKETSQFFAPGENAKASEASYKVSLLNAKAGKPHSIGENLVKPAA 177 HSP 6 Score: 39.2762 bits (90), Expect = 9.027e-16 Identity = 24/75 (32.00%), Postives = 40/75 (53.33%), Query Frame = -2 Query: 1774 AAKIIAKVMILAK--QTFHRVYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRY 1992 AAK++A ++ K +R+ LSN+T L + + S +++ ++DESI + N ANL+ FVRY Sbjct: 176 AAKVMANMLFGGKAGDEINRIPLSNDT---------------LVTRLRKSQFFSLQLDESIDLGNEANLLCFVRY 235
BLAST of SMED30006570 vs. Ensembl Medaka
Match: ENSORLT00000030788.1 (pep primary_assembly:ASM223467v1:17:2264135:2274164:1 gene:ENSORLG00000023031.1 transcript:ENSORLT00000030788.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.9005 bits (237), Expect = 1.050e-22 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 1329 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1643 + A SM G ARI P++K HC +HREALA+ ++SP LQ VL++ +K+IN+ F +CE+ G+ HT+LL HT+VR L R ++L+RLF+LR EV Sbjct: 228 TDAAASMTGSAKGLIARIKKENPDIKWTHCVIHREALASKKMSPALQDVLNDSIKVINFIKSRPLNARLFCNLCENTGVEHTELLLHTEVRWLSRGRVLSRLFELRAEVHT 338 HSP 2 Score: 31.9574 bits (71), Expect = 1.050e-22 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -1 Query: 1208 WFCKFAFLKEIFSSFNCLNLSLQGK 1282 W K +L +IF N LN+SLQGK Sbjct: 356 WLAKLCYLADIFRKLNELNMSLQGK 380 HSP 3 Score: 58.5362 bits (140), Expect = 3.327e-8 Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = -1 Query: 2000 PIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2281 P LC E L +MKP++L+ H H + K+ +FF KL+ ++ + KV+EA+Y +SLL+AK + TI + L+ PAA Sbjct: 23 PQALCFFCGEKLANASMKPAHLQRHLTTKHGCHVGKAPEFFRRKLSEFKSSQATMRKVSTTSVKVLEASYAVSLLVAKAKKPFTIAEDLLLPAA 116
BLAST of SMED30006570 vs. Ensembl Medaka
Match: ENSORLT00000040762.1 (pep primary_assembly:ASM223467v1:1:8553592:8557739:1 gene:ENSORLG00000022190.1 transcript:ENSORLT00000040762.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 92.8189 bits (229), Expect = 1.429e-21 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 1329 AKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1634 A SM G ARI PN+K HC +HREALA+ ++SP L VL+ +K+IN+ F +CE+ G HT+LL HT+VR L R ++L+RLF+LR EV Sbjct: 304 AASMTGSAKGLIARIKKENPNIKWTHCVIHREALASKKMSPALHDVLNHSIKVINFIRSRPLNARLFRSLCENTGAEHTELLLHTEVRWLSRGRVLSRLFELRAEVHT 411 HSP 2 Score: 31.187 bits (69), Expect = 1.429e-21 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -1 Query: 1208 WFCKFAFLKEIFSSFNCLNLSLQGK 1282 W K +L +IF N LN+SLQGK Sbjct: 429 WLAKLCYLADIFRKLNELNMSLQGK 453 HSP 3 Score: 58.9214 bits (141), Expect = 2.747e-8 Identity = 39/143 (27.27%), Postives = 71/143 (49.65%), Query Frame = -1 Query: 1952 LRKKDNENSPVQQRIS*IWILMDW---RWEKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAANSSQD--NSKSNDISKT 2365 ++KK + + ++ + ++LM + + P LC E L +MKP++L+ H H + K+ +FF KL+ ++ + K +EA+Y +SLL+AK + TI + L+ PA ++ + KS D KT Sbjct: 58 VKKKTKQEATKSRKYNEDYVLMGFTSASSDPPQALCFFCGEKLANASMKPAHLQRHLTTKHRCHVGKAPEFFRRKLSEFKSSQATMRKVSTTSAKALEASYAVSLLVAKAKKPFTIAEDLLLPAVVVLAETMLDKKSADTFKT 200
BLAST of SMED30006570 vs. Planmine SMEST
Match: SMESG000019238.1 (SMESG000019238.1) HSP 1 Score: 69.707 bits (169), Expect = 4.635e-13 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = -3 Query: 1335 NGAKSMVEIN*GYFARILNVAPNVKS----AHCCMHREALATHRISPGLQKVLDERVKIINYE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1640 +GA+SM G F + + S HC +H+EALA+ +S GL VL + ++ F ++C+D+G HT LLFH + R L R K L R+F+LR+E+ Sbjct: 158 DGARSMS----GRFQSMQTLVKQKSSQCIWTHCMIHKEALASKEMSTGLNIVLSLKSRM-------FSELCKDMGSVHTALLFHYEARWLSRGKFLKRVFELREEI 252 HSP 2 Score: 25.0238 bits (53), Expect = 4.635e-13 Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 1211 KFAFLKEIFSSFNCLNLSLQG 1273 K ++ +IF N LNL LQG Sbjct: 275 KLGYIVDIFEKLNVLNLQLQG 295
BLAST of SMED30006570 vs. Planmine SMEST
Match: SMESG000028317.1 (SMESG000028317.1) HSP 1 Score: 49.6766 bits (117), Expect = 1.843e-12 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = -3 Query: 1329 NGAKSMVEIN*GYFA--RILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINYE*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQV 1640 +GA SM N G A R N ++K AHC +H+EALA+ L K E +++ F ++ E+ L+ H ++R L + K L RLF L DEV+ Sbjct: 880 DGAASMTGKNKGLLALIRKFNNGSHIKYAHCMIHKEALASKNDHQNLTKFY-EMLRL-------FARVYENSNSQFEILINHAEMRWLSKGKSLRRLFDLSDEVRT 977 HSP 2 Score: 39.2762 bits (90), Expect = 1.843e-12 Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = -1 Query: 1199 LNLEMKFKFLNDRFELRNFLN*CKWFCKFAFLKEIFSSFNCLNLSLQGKFID 1354 L+ E++ + + + +F +W C FA+L +IF N LN SLQGK D Sbjct: 971 LSDEVRTFLMAENPSMTDFFQNAQWLCTFAYLADIFEKLNDLNKSLQGKGCD 1022 HSP 3 Score: 23.0978 bits (48), Expect = 1.843e-12 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = -3 Query: 1116 KRVGNGEVDMF 1148 ++VGNG +DMF Sbjct: 1043 QKVGNGNIDMF 1053 HSP 4 Score: 57.7658 bits (138), Expect = 3.970e-8 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = -1 Query: 2000 PLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAA 2275 P C I+ E L ++MKP+ L+ + H Y+DK + FF+ K LN + + D+ K++ A++ +S LIAK + TI ++L+KPAA Sbjct: 678 PQCAIFYEVLANESMKPAKLRKYVATKHESYQDKPLAFFKRKEKVLNSQKSLSHNIIYDS-KLLRASFEISYLIAKDKMPCTIAEMLLKPAA 768 HSP 5 Score: 20.4014 bits (41), Expect = 3.970e-8 Identity = 15/62 (24.19%), Postives = 30/62 (48.39%), Query Frame = -2 Query: 1792 MILAKQTFHRVYL---SNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANL 1968 ++L + ++ L SN+T I ++ + L I S +A +++E+ + NFA L Sbjct: 774 ILLGSNFYEKIKLIPFSNDTVANRIGEINTDFFIQLLDRIKKSSKFAIQLEETNDVTNFAQL 835
BLAST of SMED30006570 vs. Planmine SMEST
Match: SMESG000073961.1 (SMESG000073961.1) HSP 1 Score: 63.1586 bits (152), Expect = 5.055e-12 Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = -3 Query: 1335 NGAKSMVEIN*GYFARILNVAPNVKS----AHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEV 1640 +GA+SM G F + + S H ++REALA+ +S GL VL V ++NY + F ++C+ +G HT LLF+ + R L R K L R+F+ R+E+ Sbjct: 366 DGARSMS----GRFKSMQTLVKQKSSQCIWTHYMIYREALASKEMSTGLNIVLSTVVTVVNYIKTRPLKSRMFSELCKGMGSVHTALLFYCEARWLSRGKFLKRVFESREEI 473 HSP 2 Score: 26.9498 bits (58), Expect = 5.055e-12 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = -1 Query: 1211 KWFCKFAFLKEIFSSFNCLNLSLQG 1285 ++ K +L +IF N LNL LQG Sbjct: 492 EFIMKLGYLVDIFEKLNVLNLQLQG 516 HSP 3 Score: 20.7866 bits (42), Expect = 5.055e-12 Identity = 7/18 (38.89%), Postives = 12/18 (66.67%), Query Frame = -2 Query: 1150 LIHSKDKLNTTVAKLNLW 1203 ++ + DK+N KL+LW Sbjct: 521 ILETNDKVNAFCRKLDLW 538
BLAST of SMED30006570 vs. Planmine SMEST
Match: SMESG000033772.1 (SMESG000033772.1) HSP 1 Score: 68.5514 bits (166), Expect = 1.881e-11 Identity = 69/264 (26.14%), Postives = 111/264 (42.05%), Query Frame = -3 Query: 966 NNGAKSMVEIN*GYFARILNVAPNVKSAHCCMHREALATHRISPGLQKVLDERVKIINY------E*MTFPQMCEDIGICHTQLLFHTDVRCLPRRKILNRLFKLRDEVQVS***I*AEKFFKL---V*MVL*ICILKRNIL*F*LSQLIVTRKVH*FTVKIN*TLPWQN*IYGKRVGNGEVD---MFPSFYGFKTSSIGKIDV-----------------------DTLKSITQRLKNLRLGLKNYFPNL---KNF*WIRYPL 1643 ++G +M+ G +RI +A N +HC +HR ALAT R+ LQ +L E VK+INY + E++ + H QLL HT+V L KIL RL ++R+ ++ + + F + V L +C L N L L T+ + GK ++D +F F S+ K DV D LK+I L++L +++YFP++ + W++ P Sbjct: 251 SDGGAAMIGTVKGAVSRIKKIAKNATISHCIIHRHALATKRMPAELQSILIEAVKMINYVKSRPHKSRLLKFTAEEMVMEHHQLLLHTEVGWLSNGKILFRLVEMREALKAN---FSDQNFIQQLSDVNWSLKLCYLAGN-----LDSLNETKTS----------------LQGKNRNFDQIDKIRVFKKHIAFFKDSVKKKDVTDFPRLNEVIRKMNINIKTESNADFLKTIISHLQDLETSIQDYFPDIDAPDTYFWLKDPF 490
BLAST of SMED30006570 vs. Planmine SMEST
Match: SMESG000015406.1 (SMESG000015406.1) HSP 1 Score: 51.9878 bits (123), Expect = 2.994e-11 Identity = 31/95 (32.63%), Postives = 47/95 (49.47%), Query Frame = -1 Query: 1994 IPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENKLNNLNQFLKVKWGLTDDNKKVVEATYNMSLLIAKCRAAGTIFKILIKPAAAN 2278 +P CV+ S+ M P+ ++ H E H ++K K +DFF K + +N+ K EA+Y +S IA A TI + LIKP A + Sbjct: 140 VPQCVLCSKMFPNSAMVPAKMRRHLETIHPEFKHKQVDFFILKSDEINE-------------KATEASYIVSYRIALAGEAHTIGETLIKPCAVD 221 HSP 2 Score: 34.2686 bits (77), Expect = 2.994e-11 Identity = 22/61 (36.07%), Postives = 35/61 (57.38%), Query Frame = -2 Query: 1756 VYLSNNTF*REIIKMPNNVEKMLYSDISPSCYYASKIDESIKIANFANLMAFVRYKKIEKF 1938 V LSN+T R+I + +N++ L + S ++ ++DES IA A L+ FVRY+ F Sbjct: 238 VPLSNDTVARQIKDLASNIKSKLIFRLKNS-NFSLQMDESTDIAGLAILLVFVRYQHTNLF 297 HSP 3 Score: 21.557 bits (44), Expect = 2.994e-11 Identity = 20/68 (29.41%), Postives = 25/68 (36.76%), Query Frame = -2 Query: 2305 MDIWLKSGTFKRKESRDCIVTINKQKIMKLTKV-TNFNSERTCLEKK-----TMKTRQYNKEYLKFGF 2490 MD WL T K ES+ T V T N E+ K R+Y++ YL GF Sbjct: 67 MDRWLVKKTAKDTESQPPPEPSGSNDTENNTTVETIINPEKEVYSASMSKLPATKKRKYDESYLSIGF 134 The following BLAST results are available for this feature:
BLAST of SMED30006570 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30006570 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of SMED30006570 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30006570 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30006570 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30006570 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30006570 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30006570 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30006570 ID=SMED30006570|Name=SMED30006570|organism=Schmidtea mediterranea sexual|type=transcript|length=3502bpback to top protein sequence of SMED30006570-orf-1 >SMED30006570-orf-1 ID=SMED30006570-orf-1|Name=SMED30006570-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=127bp MDWRWEKPIPLCVIWSENLTYKNMKPSNLKCHFEINHNKYKDKSIDFFENback to top InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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