Bromodomain-containing protein 7

Overview
NameBromodomain-containing protein 7
Smed IDSMED30006548
Length (bp)1993
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Bromodomain-containing protein 7 (SMED30006548) t-SNE clustered cells

Violin plots show distribution of expression levels for Bromodomain-containing protein 7 (SMED30006548) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Bromodomain-containing protein 7 (SMED30006548) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Bromodomain-containing protein 7 (SMED30006548) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30006548

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30006548SMESG000060992.1 SmedASXL_013969SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30006548SMESG000060992.1 SmedASXL_013969SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30006548SMESG000060992.1 dd_Smed_v4_8872_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30006548SMESG000060992.1 dd_Smed_v4_8872_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30006548SMESG000060992.1 dd_Smed_v4_8872_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30006548SMESG000060992.1 dd_Smed_v4_8872_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Human
Match: BRD7 (bromodomain containing 7 [Source:HGNC Symbol;Acc:HGNC:14310])

HSP 1 Score: 77.7962 bits (190), Expect = 3.492e-14
Identity = 74/256 (28.91%), Postives = 109/256 (42.58%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTRDF-------IKSSPPSD------WRKADDQSQSTTPPPNKETDSSTEDNNDAANSS-----------------LQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  S+ +    +    D+       L++V T+         ++ S P D         A +  Q T   P    DSST+D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  I +   +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEQITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQVTPGDIVSTYGVRKAMG 617
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Human
Match: BRD7 (bromodomain containing 7 [Source:HGNC Symbol;Acc:HGNC:14310])

HSP 1 Score: 75.8702 bits (185), Expect = 1.144e-13
Identity = 73/256 (28.52%), Postives = 110/256 (42.97%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTRDF-------IKSSPPSD------WRKADDQSQSTTPPPNKETDSSTEDNNDAANSS-----------------LQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  S+ +    +    D+       L++V T+         ++ S P D         A +   +   PP +  DSST+D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  I +   +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEITEVEPPGR-LDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQVTPGDIVSTYGVRKAMG 616
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Match: swsn-9 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:Q17581])

HSP 1 Score: 54.6842 bits (130), Expect = 1.905e-7
Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1288 NDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQ--------CDESSEL 1551
            N+  R + IGD VG L+ GT  +    + R      ++YL+YG   SF P YDS  +  +KE +D  LR Y + S   D          C E SE+
Sbjct:  357 NNAPRRVTIGDIVGPLEEGTPGMIQMADHRLFSQAPVNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Match: swsn-9 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:Q17581])

HSP 1 Score: 54.6842 bits (130), Expect = 1.905e-7
Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1288 NDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQ--------CDESSEL 1551
            N+  R + IGD VG L+ GT  +    + R      ++YL+YG   SF P YDS  +  +KE +D  LR Y + S   D          C E SE+
Sbjct:  357 NNAPRRVTIGDIVGPLEEGTPGMIQMADHRLFSQAPVNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Match: swsn-9 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:Q17581])

HSP 1 Score: 54.299 bits (129), Expect = 2.454e-7
Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1288 NDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQ--------CDESSEL 1551
            N+  R + IGD VG L+ GT  +    + R      ++YL+YG   SF P YDS  +  +KE +D  LR Y + S   D          C E SE+
Sbjct:  357 NNAPRRVTIGDIVGPLEEGTPGMIQMADHRLFSQAPVNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Match: swsn-9 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:Q17581])

HSP 1 Score: 54.299 bits (129), Expect = 2.454e-7
Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1288 NDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQ--------CDESSEL 1551
            N+  R + IGD VG L+ GT  +    + R      ++YL+YG   SF P YDS  +  +KE +D  LR Y + S   D          C E SE+
Sbjct:  357 NNAPRRVTIGDIVGPLEEGTPGMIQMADHRLFSQAPVNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Match: swsn-9 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:Q17581])

HSP 1 Score: 54.299 bits (129), Expect = 2.454e-7
Identity = 33/96 (34.38%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1288 NDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQ--------CDESSEL 1551
            N+  R + IGD VG L+ GT  +    + R      ++YL+YG   SF P YDS  +  +KE +D  LR Y + S   D          C E SE+
Sbjct:  357 NNAPRRVTIGDIVGPLEEGTPGMIQMADHRLFSQAPVNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Fly
Match: CG7154 (gene:FBgn0031947 transcript:FBtr0079488)

HSP 1 Score: 60.8474 bits (146), Expect = 2.844e-9
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 1 
Query: 1297 ERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGD 1521
            ER++ IGD VG L+ G+  L   + D+RN V  +  L+YG   SF P++DS  S  S E +  +LR Y ++S  +
Sbjct:  514 ERVVTIGDLVGKLQKGSAQLQTRQVDKRNAVRTVKSLNYGAFASFAPTFDSRFSTLSAEETQLVLRTYGDASSAE 588
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Zebrafish
Match: brd7 (bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687])

HSP 1 Score: 76.6406 bits (187), Expect = 4.684e-14
Identity = 75/267 (28.09%), Postives = 117/267 (43.82%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQC---------DESSELA--TTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSST-------------EDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNC 1953
            T L ++NP +    +     + +G   G L++G   L G+KED+RN VT ++Y++YG   S+ P+YDS  +  SKE SD +   Y E S   D +          +  S LA      +T G + S  L      D + +  P++   A D ++     P+   DS T             E  +       Q  LDE+   L  L+    +RLS  Q       L P+ +E  ++EKVT NL  L  +  P  + ++  IRKA+  
Sbjct:  339 TTLGILNPVDLSAGDPGYCPVKLGMMGGRLQTGINTLQGFKEDKRNMVTPVAYMNYGPFTSYAPTYDSSFANISKEDSDLIYSFYGEDSSQPDSESIADYLAKSEEHMSRLADNVLDALTSG-EHSKKLKETKC-DNLPTEEPAEKDDATDDAEVVASEPSS-ADSVTPLTSVASIPDLLPESFDSEEAEHFQQKLDETTLLLRELQKVQKERLSAKQPPNIICLLAPTAKELQLAEKVTGNLAQLTSQVTPADVCSVYGIRKAMGV 602
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Xenopus
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:493370])

HSP 1 Score: 67.0106 bits (162), Expect = 6.118e-11
Identity = 62/215 (28.84%), Postives = 92/215 (42.79%), Query Frame = 1 
Query: 1333 LKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSES-SCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSK-------LQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNC 1953
            L++G  +L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E  S    +   E  E        + D     +++ FT               D +   T    ++ +  S   N        Q  LDE+ K L  L+     RLS          L PS +E  I+E+V  NL  L  +  P  I ++  +RKA+  
Sbjct:  339 LQAGVNSLQGFKEDKRNKVTPVLYLNYGPFTSYAPCYDSTFANVSKDDSDLIYSTYGEEPSLHGTFSIQEFLEKTLEKPYGMAD----CILDAFT---------------DGEYSRTERDESRVSSESKISNFITEAERFQRKLDETTKLLQDLQEVQNDRLSTKPPPNMVCLLAPSAKEIQIAERVNDNLKLLAQQVQPGDIVSIPGLRKAMGI 534
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Xenopus
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:493370])

HSP 1 Score: 63.1586 bits (152), Expect = 1.146e-9
Identity = 69/254 (27.17%), Postives = 105/254 (41.34%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSES-SCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDN-----------NDAANSSLQTLLDESWKDLARLKSSNYQRLSK-------LQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            T L L++P   G +   E    I      L++G  +L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E  S    +   E  E        + D     +++ FT      +   + R A  +  +     N +   +   N           +       Q  LDE+ K L  L+     RLS          L PS +E  I+E+V  NL  L  +  P  I ++  +RKA+ 
Sbjct:  357 TTLALLSP---GDLYPAEAGHGILGSTTRLQAGVNSLQGFKEDKRNKVTPVLYLNYGPFTSYAPCYDSTFANVSKDDSDLIYSTYGEEPSLHGTFSIQEFLEKTLEKPYGMAD----CILDAFTDGEYSRTERDESRAAVSECSARQGLTNVQDQFACLKNVFGLGLFDEVFDSEEAERFQRKLDETTKLLQDLQEVQNDRLSTKPPPNMVCLLAPSAKEIQIAERVNDNLKLLAQQVQPGDIVSIPGLRKAMG 603
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Xenopus
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:493370])

HSP 1 Score: 59.3066 bits (142), Expect = 1.594e-8
Identity = 69/255 (27.06%), Postives = 104/255 (40.78%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSE--SSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDN-----------NDAANSSLQTLLDESWKDLARLKSSNYQRLSK-------LQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            T L L++P   G +   E    I      L++G  +L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E  S  G      E  E        + D     +++ FT      +   + R    +  +     N +   +   N           +       Q  LDE+ K L  L+     RLS          L PS +E  I+E+V  NL  L  +  P  I ++  +RKA+ 
Sbjct:  357 TTLALLSP---GDLYPAEAGHGILGSTTRLQAGVNSLQGFKEDKRNKVTPVLYLNYGPFTSYAPCYDSTFANVSKDDSDLIYSTYGEEPSLHGTFRYIQEFLEKTLEKPYGMAD----CILDAFTDGEYSRTERDESRVTVSECSARQGLTNVQDQFACLKNVFGLGLFDEVFDSEEAERFQRKLDETTKLLQDLQEVQNDRLSTKPPPNMVCLLAPSAKEIQIAERVNDNLKLLAQQVQPGDIVSIPGLRKAMG 604
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Mouse
Match: Brd7 (bromodomain containing 7 [Source:MGI Symbol;Acc:MGI:1349766])

HSP 1 Score: 75.8702 bits (185), Expect = 9.100e-14
Identity = 70/255 (27.45%), Postives = 115/255 (45.10%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTR--------DFIKSSPPSDWR-KADD---QSQSTTPPPNKETDSSTEDNNDAANS-----------------SLQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RN+VT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  +  + +  +    D+       L++V T+        D   SSP  + + +A D   +++ T   P    +SS++D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  + +++ +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNRVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPNNFSISEFLATCQDYPYVMADSLLDVLTKGGHSRSLQDLDMSSPEDEGQTRALDTAKEAEITQIEPTGRLESSSQDRLTALQAVTTFGAPAEVFDSEEAEVFQRKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMYLAEQVTNNLKELTQQVTPGDVVSIHGVRKAMG 616
[Close]
BLAST of Bromodomain-containing protein 7 vs. UniProt/SwissProt
Match: sp|Q9NPI1|BRD7_HUMAN (Bromodomain-containing protein 7 OS=Homo sapiens OX=9606 GN=BRD7 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.493e-13
Identity = 73/256 (28.52%), Postives = 110/256 (42.97%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTRDF-------IKSSPPSD------WRKADDQSQSTTPPPNKETDSSTEDNNDAANSS-----------------LQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  S+ +    +    D+       L++V T+         ++ S P D         A +   +   PP +  DSST+D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  I +   +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEITEVEPPGR-LDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQVTPGDIVSTYGVRKAMG 616
[Close]
BLAST of Bromodomain-containing protein 7 vs. UniProt/SwissProt
Match: sp|O88665|BRD7_MOUSE (Bromodomain-containing protein 7 OS=Mus musculus OX=10090 GN=Brd7 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.366e-13
Identity = 70/255 (27.45%), Postives = 115/255 (45.10%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTR--------DFIKSSPPSDWR-KADD---QSQSTTPPPNKETDSSTEDNNDAANS-----------------SLQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RN+VT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  +  + +  +    D+       L++V T+        D   SSP  + + +A D   +++ T   P    +SS++D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  + +++ +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNRVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPNNFSISEFLATCQDYPYVMADSLLDVLTKGGHSRSLQDLDMSSPEDEGQTRALDTAKEAEITQIEPTGRLESSSQDRLTALQAVTTFGAPAEVFDSEEAEVFQRKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMYLAEQVTNNLKELTQQVTPGDVVSIHGVRKAMG 616
[Close]
BLAST of Bromodomain-containing protein 7 vs. UniProt/SwissProt
Match: sp|Q5R8B0|BRD7_PONAB (Bromodomain-containing protein 7 OS=Pongo abelii OX=9601 GN=BRD7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.063e-13
Identity = 73/256 (28.52%), Postives = 110/256 (42.97%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLY----LMNVFTRDF-------IKSSPPSD------WRKADDQSQSTTPPPNKETDSSTEDNNDAANSS-----------------LQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            + +G   G L+SG   L G+KED+RNKVT + YL+YG   S+ P YDS  +  SK+ SD +   Y E S       D  S+ +    +    D+       L++V T+         ++ S P D         A +   +   PP +  DSST+D   A  +                   Q  LDE+ + L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  I +   +RKA+ 
Sbjct:  369 VRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS-------DLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEITEVEPPGR-LDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQVTPGDIVSTYGVRKAMG 616
[Close]
BLAST of Bromodomain-containing protein 7 vs. UniProt/SwissProt
Match: sp|Q5ZKG2|BRD7_CHICK (Bromodomain-containing protein 7 OS=Gallus gallus OX=9031 GN=BRD7 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.080e-12
Identity = 72/274 (26.28%), Postives = 107/274 (39.05%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNK--------------ETDSSTEDNNDAANSS-----------------LQTLLDESWKDLARLKSSNYQRLSK-------LQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNC 1953
            T L L+NP +          + +G   G L+SG   L G+KED+RNKVT ++YL+YG   S+ P+YDS  +  SKE SD +   Y E S    +   E         +    D+   + +       K       R+ +   +    P  +                DS+  D   A  +                   Q  LDE+ K L  L+ +  +RLS          L PS  E  ++E+VT NL  L  +  P  I +   IRKA+  
Sbjct:  349 TTLGLLNPVDLTAGEAGYCPVKLGMTAGRLQSGVNMLQGFKEDKRNKVTPVTYLNYGPYSSYAPTYDSTFANISKEDSDLIYSTYGEDSNQGSFSIHEF--------LMKSQDYPFLMADSLLDVLTKGGHSRSLRELETPLEEDEGPHERSDALKEIMEIDIAARLDSANNDRLTALKAVTNFGMPMEEFDSEEAEIFQRKLDETTKLLRELQDAQNERLSTKPPPNMICLLGPSYREMHLAERVTNNLKELAQQVTPGDIVSTYGIRKAMGI 614
[Close]
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Match: A0A4Z2DFZ3 (Bromodomain-containing protein isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_001295 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.639e-24
Identity = 100/319 (31.35%), Postives = 141/319 (44.20%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNL--AGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSL------------------LRNYSESSCGDDYQC-DE------------------------------SSEL---ATTPEITIGDDFSLYLMNVFTRDFIKSSPPS--DWRKADDQSQSTTPPPNKETDSSTEDNNDAANSS---------------------LQTLLDESWKDLARLKSSNYQRLSKLQ--------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKAL 1947
            T LN++NP N G ++  ER+  IGD+ G L SG+  L   GY+EDRRNK+   +YLDYG+ +SF P YDSG S+C+ E++  L                  L ++  + C +D++  DE                              SSEL      PE+     FS+ L N FTRD IK    S  D    DD  +S+   P      +T D + AA S+                     L T+L ES KDL  L  + Y RL            L+P++ E SI+ K+T+ LI L   T P  + +   +RKA+
Sbjct:  221 THLNILNPDNNGIVSRTERVQSIGDEAGHLYSGSCLLPNGGYREDRRNKIIPYTYLDYGSYYSFAPVYDSGASHCTPESNQLLLGTTWLPARTPFVLGNRSLNSFDLTGCANDFEITDEIISTVLEIGDQQLAVSLAVAESEQRSLARLSSELEDIVPGPEVPDEFVFSMCLANAFTRDLIKEDKQSVVDPCSKDDSDESSVKSPGVSDSLATCDLDFAAQSNFIDSSARVHCGEQSDSDEVKQLNTILRESAKDLNALYCAQYLRLGDTSQAANLGSTLRPTSSEMSIAHKLTEKLIKLTKHTRPADLIHPYTVRKAM 539
[Close]
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Match: V4AD00 (Bromo domain-containing protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_238111 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.270e-21
Identity = 76/248 (30.65%), Postives = 129/248 (52.02%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMN----VFTR-DFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRL-SKLQLQ------PSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNC 1953
            T LN++NP+N G++++ E+++ IG  VG L +GT +L  +KED+RNK+T ++YL+YG   S+ P+YDS  S  SK  SD LL  Y     GD+     +S +     +    D+++ ++N    + T+ +  K+    + R+ +D+++          D+S        +  +Q  LD +   +  L     +RL SKL         PS +E  ++EKVT+ L  L     PQ I ++N +RKA+  
Sbjct:  350 TTLNILNPHNDGRVSETEKVVNIGSLVGKLTTGTGSLNTFKEDKRNKITPVNYLNYGPFSSYAPTYDSSFSTLSKADSDLLLSTY-----GDETGAQYASSVMDF--VDTAGDYAVKMVNNLLDILTKCEHSKTQRTLEARRKEDENKEPASSEQSTVDTSIVKEESPVD-KIQQQLDHTASLITSLHDKQKERLSSKLPSHLAHIPGPSEKETELAEKVTQELTALAKAAAPQDIVSMNSVRKAMGI 589
[Close]
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Match: A0A095AZ98 (Bromodomain-containing protein 7 (Fragment) OS=Schistosoma haematobium OX=6185 GN=MS3_08561 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.695e-21
Identity = 98/323 (30.34%), Postives = 140/323 (43.34%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNL--AGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLL------------------RNYSESSCGDDYQC-DE------------------------------SSELA-TTPEITIGDD--FSLYLMNVFTRDFIK--------------SSPPSDWRKADDQSQSTTPPP--------NKETDSSTEDNNDAANSS-----LQTLLDESWKDLARLKSSNYQRLSKLQ--------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKAL 1947
            T LN++NP N G I+  ER+  IGD+ G L SG+  L   GY+EDRRNK+   +YLDYG+ +SF P YDSG S+C+ E++  LL                   ++   SC +D++  DE                              SSEL    P   + D+  FS+ L N FTRD IK              S   SD R       + +P          +  TDSS    ++  + +     L T L ES +DL  L  S Y RL            L+P+  E SI+ ++T+ LI L  +  P  + +   +RKA+
Sbjct:  101 TYLNILNPDNNGIISKTERVQSIGDEAGHLYSGSYLLPNGGYREDRRNKIIPYTYLDYGSYYSFAPVYDSGASHCTPESNQLLLGTTWLPARTPFVLGSCSSNSFDSYSCANDFEITDEIISTVLEMGDQQLAVSLAVAESEQRAIAQLSSELEDIIPGPDVPDEFVFSMCLANAFTRDLIKKEEKLSAFDTLDLCSEVNSDERSITSTDVNNSPAACDLDSATHHNSTDSSVRSQSEEQSIADDAKQLSTELVESAQDLNALYCSQYLRLGDTSQAANLGSTLRPTPNEMSIAHRLTEKLIKLTKRARPGDLIHPYTVRKAM 423
[Close]
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Match: A0A183P2V9 (Uncharacterized protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS8695 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.836e-20
Identity = 99/323 (30.65%), Postives = 144/323 (44.58%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNL--AGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLL------------------RNYSESSCGDDYQC-DE------------------------------SSELA-TTPEITIGDD--FSLYLMNVFTRDFIKSSPP---------SDWRKADDQSQSTT----PPPNKETDSSTEDNN-DAANSS-------------LQTLLDESWKDLARLKSSNYQRLSKLQ--------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKAL 1947
            T LN++NP N G I+  ER+  IGD+ G L SG+  L   GY+EDRRNK+   +YLDYG+ +SF P YDSG S+C+ E++  LL                   ++   SC +D++  DE                              SSEL    P   + D+  FS+ L N FTRD IK                  +D++S ++T     P   + DS+T  N+ D++  S             L T L ES +DL  L  S Y RL            L+P+  E SI+ ++T+ LI L  +  P  + +   +RKA+
Sbjct:  220 TYLNILNPDNNGIISKTERVQSIGDEAGHLYSGSYLLPNGGYREDRRNKIIPYTYLDYGSYYSFAPVYDSGASHCTPESNQLLLGTTWLPARTPFVLGSCSSNSFDSYSCANDFEITDEIISTVLEMGDQQLAVSLAVAESEQRAIAQLSSELEDIIPGPDVPDEFVFSMCLANAFTRDLIKKEEKLSAFDTLDLCSEVNSDERSITSTDVNNSPAACDLDSATHHNSIDSSVRSQSEEQSIADDAKQLSTELVESAQDLNALYCSQYLRLGDTSQAANLGSTLRPTPNEMSIAHRLTEKLIKLTKRARPGDLIHPYTVRKAM 542
[Close]
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Match: A0A183JYU5 (Uncharacterized protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS7902 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.965e-20
Identity = 99/323 (30.65%), Postives = 144/323 (44.58%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNL--AGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLL------------------RNYSESSCGDDYQC-DE------------------------------SSELA-TTPEITIGDD--FSLYLMNVFTRDFIKSSPP---------SDWRKADDQSQSTT----PPPNKETDSSTEDNN-DAANSS-------------LQTLLDESWKDLARLKSSNYQRLSKLQ--------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKAL 1947
            T LN++NP N G I+  ER+  IGD+ G L SG+  L   GY+EDRRNK+   +YLDYG+ +SF P YDSG S+C+ E++  LL                   ++   SC +D++  DE                              SSEL    P   + D+  FS+ L N FTRD IK                  +D++S ++T     P   + DS+T  N+ D++  S             L T L ES +DL  L  S Y RL            L+P+  E SI+ ++T+ LI L  +  P  + +   +RKA+
Sbjct:  220 TYLNILNPDNNGIISKTERVQSIGDEAGHLYSGSYLLPNGGYREDRRNKIIPYTYLDYGSYYSFAPVYDSGASHCTPESNQLLLGTTWLPARTPFVLGSCSSNSFDSYSCANDFEITDEIISTVLEMGDQQLAVSLAVAESEQRAIAQLSSELEDIIPGPDVPDEFVFSMCLANAFTRDLIKKEEKLSAFDTLDLCSEVNSDERSITSTYVNNSPAACDLDSATHHNSIDSSVRSQSEEQSIVDDAKQLSTELVESAQDLNALYCSQYLRLGDTSQAANLGSTLRPTPNEMSIAHRLTEKLIKLTKRARPGDLIHPYTVRKAM 542
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Cavefish
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:103045632])

HSP 1 Score: 81.6481 bits (200), Expect = 1.065e-15
Identity = 79/284 (27.82%), Postives = 128/284 (45.07%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDF--SLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPP-------PNKETDS----------STEDNNDAANSSLQTL----------------------LDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNC 1953
            T L ++NP +    +     + +G   G L++G   L G+KED+RN+VT ++Y++YG   S+ P+YDS  +  SKE SD +   Y E S     Q  ES         TI D    S   MN    + + +    +  K   ++++ TPP       P +++D+          S+  N+  A SS+ +L                      LDE+   L  L+ +  +RLS  Q       L P+ +E  ++EKVT NL  L  + NP  ++++  IRKA+  
Sbjct:  336 TTLGILNPADLNVGDPGYCPVKLGMMGGRLQTGVNTLQGFKEDKRNRVTPVTYMNYGPFSSYAPTYDSSFANISKEESDLIYSFYGEESS---LQGSES---------TIADFLAKSEEHMNRLADNILDALTNGEHSKQLKENEANTPPVEEAVEKPPEQSDTANDVEVVGSESSSGNSMTALSSVMSLGLGLDLLQETFESEEAEQFQKKLDETTLLLRDLQEAQRERLSAKQPPNIICLLTPTAKEIQLAEKVTGNLAQLTSQVNPSDVSSVYGIRKAMGI 607
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Cavefish
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:103045632])

HSP 1 Score: 80.1073 bits (196), Expect = 2.725e-15
Identity = 72/247 (29.15%), Postives = 116/247 (46.96%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEIT--IGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQ---SQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            T L ++NP +    +     + +G   G L++G   L G+KED+RN+VT ++Y++YG   S+ P+YDS  +  SKE SD +   Y E S     +   +  LA + E    + D+    L N      +K +      KA +      S +   N  T  S+  +        Q  LDE+   L  L+ +  +RLS  Q       L P+ +E  ++EKVT NL  L  + NP  ++++  IRKA+ 
Sbjct:  348 TTLGILNPADLNVGDPGYCPVKLGMMGGRLQTGVNTLQGFKEDKRNRVTPVTYMNYGPFSSYAPTYDSSFANISKEESDLIYSFYGEESSLQGSESTIADFLAKSEEHMNRLADNILDALTNGEHSKQLKENEAVSMIKALNHLSVVGSESSSGNSMTALSSVMSLGLEAEQFQKKLDETTLLLRDLQEAQRERLSAKQPPNIICLLTPTAKEIQLAEKVTGNLAQLTSQVNPSDVSSVYGIRKAMG 594
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Cavefish
Match: ENSAMXT00000050348.1 (pep primary_assembly:Astyanax_mexicanus-2.0:25:32559927:32561965:1 gene:ENSAMXG00000040699.1 transcript:ENSAMXT00000050348.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.6026 bits (122), Expect = 2.494e-8
Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 1 
Query: 1306 IPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDS 1449
            + +G   G L++G   L G+KED+RN+VT ++Y++YG   S+ P+YDS
Sbjct:    1 VKLGMMGGRLQTGVNTLQGFKEDKRNRVTPVTYMNYGPFSSYAPTYDS 48
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005457.1 (pep scaffold:Pmarinus_7.0:GL476632:176391:216820:1 gene:ENSPMAG00000004922.1 transcript:ENSPMAT00000005457.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.3958 bits (163), Expect = 6.169e-12
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESS 1512
            T L ++NP +  +   Y   + +G  VG L+ GT  L G+KED+RN++T ++YL+YG   +F P YDS  S  SKE SD L   Y + +
Sbjct:  346 TTLAIVNPADSKKGESYP--VTLGMLVGKLQFGTSCLQGFKEDKRNRITPVTYLNYGPFSTFAPQYDSTFSNLSKEESDVLYSTYGDQA 432
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Nematostella
Match: EDO28093 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T7F8])

HSP 1 Score: 55.0694 bits (131), Expect = 1.588e-9
Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 1 
Query: 1312 IGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNY 1500
            +G  VG + +G+   A +KED+RNK T +SYL YG   SF P+YDS  +  SK  SD L   Y
Sbjct:   32 LGTVVGKVATGSHITATFKEDKRNKATPVSYLMYGPFGSFAPTYDSSRATISKGESDLLYSTY 94
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Nematostella
Match: EDO45971 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR96])

HSP 1 Score: 57.7658 bits (138), Expect = 1.163e-8
Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 1 
Query: 1312 IGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNY 1500
            +G  VG + +G+   A +KED+RNK T +SYL YG   SF P+YDS  +  SK  SD L   Y
Sbjct:  452 LGTVVGKVATGSHITATFKEDKRNKATPVSYLMYGPFGSFAPTYDSSRATISKGESDLLYSTY 514
[Close]
BLAST of Bromodomain-containing protein 7 vs. Ensembl Medaka
Match: brd7 (bromodomain containing 7 [Source:NCBI gene;Acc:101164713])

HSP 1 Score: 72.0182 bits (175), Expect = 1.127e-12
Identity = 76/264 (28.79%), Postives = 120/264 (45.45%), Query Frame = 1 
Query: 1246 TILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSC--GDDYQCDESSELATTPEIT--IGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTT-PPPNKETDSSTED--NNDAANSS---------------LQTLLDESWKDLARLKSSNYQRLSKLQ-------LQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALN 1950
            T L ++NP +    +     + +G     L++G   L  ++ED+RN++  +SYL+YG   S+ P+YDS  +  SK+ SD +   Y E S   G D     S  LA + E    + D+    + N      +K     +   AD Q++ TT    NKE     E     DA  S+                Q  LDE+ K L  L+ +  +RLS  Q       L P+ +E  ++EKVT NL  L  +  P  +++++ IRKA+ 
Sbjct:  320 TTLGILNPADPSVGDAGYCPVKLGMMSHRLQNGVNCLQSFREDKRNRINPVSYLNYGPFTSYAPTYDSSFANISKDDSDLVYSLYGEESSLQGSDSL---SEFLARSNEYVYKVADNLLDAMTNGEHSRTLK-----ETEAADAQTEKTTNSQENKEHMEVAESLRGLDALRSAAGLQPDEELSGEALHFQQKLDETTKLLRDLQEAQKERLSAKQPPNMICLLAPTAKELELAEKVTGNLTELTGQVAPCDVSSVHAIRKAMG 575
[Close]
BLAST of Bromodomain-containing protein 7 vs. Planmine SMEST
Match: SMESG000060992.1 (SMESG000060992.1)

HSP 1 Score: 1219.91 bits (3155), Expect = 0.000e+0
Identity = 623/641 (97.19%), Postives = 625/641 (97.50%), Query Frame = 1 
Query:   34 MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNENFKFLIQRFSDNSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQTPSTARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQIYMKTIHKRLKEGKYCERXXXXXXXXXXMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLEXXXXXXXXXXXXXTILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNCK 1956
            MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNENFKFLIQRFSDNSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQT STARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQI MKTIHKRLKEGKYCERLENLENDLLLMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLESVKSSDLKSSSASTILNLMNPYN+GQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQ              +KTNPQSITNLNMIRKALNCK
Sbjct:    1 MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNENFKFLIQRFSDNSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQTSSTARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQIDMKTIHKRLKEGKYCERLENLENDLLLMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLESVKSSDLKSSSASTILNLMNPYNRGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQ--------------MKTNPQSITNLNMIRKALNCK 627
[Close]
BLAST of Bromodomain-containing protein 7 vs. Planmine SMEST
Match: SMESG000060992.1 (SMESG000060992.1)

HSP 1 Score: 1188.71 bits (3074), Expect = 0.000e+0
Identity = 613/641 (95.63%), Postives = 615/641 (95.94%), Query Frame = 1 
Query:   34 MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNENFKFLIQRFSDNSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQTPSTARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQIYMKTIHKRLKEGKYCERXXXXXXXXXXMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLEXXXXXXXXXXXXXTILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNCK 1956
            MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNEN          NSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQT STARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQI MKTIHKRLKEGKYCERLENLENDLLLMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLESVKSSDLKSSSASTILNLMNPYN+GQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQ              +KTNPQSITNLNMIRKALNCK
Sbjct:    1 MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECNVNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQLHKSMYFKSPPLNAIFIESATEEQLEILRICKNEN----------NSSIKSKYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESSLKFSKRTTIEQTSSTARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISNKPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLIDYFAPSSSQLGKQIDMKTIHKRLKEGKYCERLENLENDLLLMYGNGFQSFVEKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLESVKSSDLKSSSASTILNLMNPYNRGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRNKVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQCDESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTTPPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQPSNEEQ--------------MKTNPQSITNLNMIRKALNCK 617
The following BLAST results are available for this feature:
BLAST of Bromodomain-containing protein 7 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
BRD73.492e-1428.91bromodomain containing 7 [Source:HGNC Symbol;Acc:H... [more]
BRD71.144e-1328.52bromodomain containing 7 [Source:HGNC Symbol;Acc:H... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
swsn-91.905e-734.38SWI/SNF nucleosome remodeling complex component [... [more]
swsn-91.905e-734.38SWI/SNF nucleosome remodeling complex component [... [more]
swsn-92.454e-734.38SWI/SNF nucleosome remodeling complex component [... [more]
swsn-92.454e-734.38SWI/SNF nucleosome remodeling complex component [... [more]
swsn-92.454e-734.38SWI/SNF nucleosome remodeling complex component [... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG71542.844e-938.67gene:FBgn0031947 transcript:FBtr0079488[more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
brd74.684e-1428.09bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
brd76.118e-1128.84bromodomain containing 7 [Source:NCBI gene;Acc:493... [more]
brd71.146e-927.17bromodomain containing 7 [Source:NCBI gene;Acc:493... [more]
brd71.594e-827.06bromodomain containing 7 [Source:NCBI gene;Acc:493... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Brd79.100e-1427.45bromodomain containing 7 [Source:MGI Symbol;Acc:MG... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q9NPI1|BRD7_HUMAN5.493e-1328.52Bromodomain-containing protein 7 OS=Homo sapiens O... [more]
sp|O88665|BRD7_MOUSE6.366e-1327.45Bromodomain-containing protein 7 OS=Mus musculus O... [more]
sp|Q5R8B0|BRD7_PONAB7.063e-1328.52Bromodomain-containing protein 7 OS=Pongo abelii O... [more]
sp|Q5ZKG2|BRD7_CHICK1.080e-1226.28Bromodomain-containing protein 7 OS=Gallus gallus ... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4Z2DFZ37.639e-2431.35Bromodomain-containing protein isoform 1 OS=Schist... [more]
V4AD004.270e-2130.65Bromo domain-containing protein OS=Lottia gigantea... [more]
A0A095AZ989.695e-2130.34Bromodomain-containing protein 7 (Fragment) OS=Sch... [more]
A0A183P2V92.836e-2030.65Uncharacterized protein OS=Schistosoma mattheei OX... [more]
A0A183JYU52.965e-2030.65Uncharacterized protein OS=Schistosoma curassoni O... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
brd71.065e-1527.82bromodomain containing 7 [Source:NCBI gene;Acc:103... [more]
brd72.725e-1529.15bromodomain containing 7 [Source:NCBI gene;Acc:103... [more]
ENSAMXT00000050348.12.494e-843.75pep primary_assembly:Astyanax_mexicanus-2.0:25:325... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000005457.16.169e-1240.45pep scaffold:Pmarinus_7.0:GL476632:176391:216820:1... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO280931.588e-946.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO459711.163e-846.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
brd71.127e-1228.79bromodomain containing 7 [Source:NCBI gene;Acc:101... [more]
back to top
BLAST of Bromodomain-containing protein 7 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000060992.10.000e+097.19SMESG000060992.1[more]
SMESG000060992.10.000e+095.63SMESG000060992.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30006548 ID=SMED30006548|Name=Bromodomain-containing protein 7|organism=Schmidtea mediterranea sexual|type=transcript|length=1993bp
CGATCTTTTATATTAACGTTTCAAACATTTTAAATGGATGATGCGAATAA
TTTAGACAAATCCGAATCTACCGATGAAAATGATGAAAGGTCTGAAACGG
AGACAGAATGTTTTGAAAAGACAGACTCCGAAATTATATCTCAAAGTGAT
AATATTCAAGAATATCGATGTTTAGAATGCAATGTTAATTTTCAAATTTA
TGAGGATTTTCAAAAGCATAAAGTCTACAAACATCCTATTGTTATTTATA
AATGCACGATAGATAACTGTCAAAGGTGGTTTTCTTCACGTAAAAGTCGA
GATAAACATTCAGAAAATTCAAAATCTCAACTTCATAAATCGATGTATTT
TAAATCCCCACCTCTAAATGCTATTTTTATTGAAAGTGCTACTGAGGAAC
AACTTGAAATACTTAGAATATGCAAAAATGAAAATTTCAAGTTTCTCATT
CAACGATTTTCAGACAATTCGAGTATAAAATCAAAATATAAACGCGGTCC
GAAACCGAAAATGTCTAATGAAAGTGATTTTTTAGTCGGATTACCCAGGG
ATCAATTAAAACGAAAGTTAATGGAAAGTGTTGTGGAGAAATTGGAATCT
AGCACTAATAACAAAACCAATCAAGAGTCTTCATTAAAATTTTCAAAACG
TACAACTATAGAACAAACACCATCTACTGCAAGGCATGGCAATGGAAACA
GTCCAAAATTCATATCTAAAAATCATAGAATAAAGAGTTCTGACTGTAAT
AATAAAAATTGTACAGATGATGTGATTTCAAATAAACCTAAACCCATTCC
TGACTTGAGTCACATAAAAGTGCCTATTCTATCTCTAGATGCTTCATGTA
CGATTGGAAAGTTTGCAGAAGATTTAATTAATTTATTGACAATTTATGAT
CCTGCTGAATTTTTCAAATATCCATTGATTGATTATTTTGCCCCGTCATC
TTCTCAGCTCGGAAAACAAATTTATATGAAAACTATTCATAAAAGATTGA
AAGAGGGAAAATATTGTGAGAGGTTGGAAAATCTCGAAAACGATCTTTTG
TTGATGTACGGAAATGGGTTTCAAAGTTTTGTTGAGAAATCCCAAGGCTG
GTGTGAAGCAGGAAAACTTTATCAAACGGCTTTGGTAAATATTCAAAATG
CCAAAAAAAAATTTCCAGCCTCAAAACCCACCAATGAAACGAGTTTAACG
TTGGAATCGGTGAAAAGTTCCGATTTGAAGTCCAGCAGCGCCAGTACGAT
TCTCAATTTGATGAATCCATACAATAAGGGGCAAATCAATGATTACGAAC
GGATCATACCGATCGGGGATCAAGTTGGCACTCTGAAATCCGGAACACAG
AATTTAGCTGGCTACAAAGAAGATAGAAGAAATAAAGTCACAGTTTTATC
GTACTTGGATTACGGCACGAATTTCTCATTTGGACCTTCCTATGATTCCG
GCAATTCGTATTGCTCGAAAGAAACCAGTGATTCCTTGCTCAGAAATTAC
AGTGAGTCGAGTTGCGGTGACGATTACCAATGCGATGAGTCCAGTGAGCT
GGCAACAACGCCTGAGATTACGATAGGAGACGATTTCAGTCTTTATTTGA
TGAATGTTTTCACCAGGGATTTCATTAAATCCAGCCCACCTTCCGATTGG
AGGAAGGCTGACGACCAATCGCAATCAACAACACCGCCACCGAATAAAGA
AACTGACTCATCGACTGAGGATAATAATGATGCCGCCAATTCTAGCCTTC
AGACGCTATTGGATGAGAGTTGGAAAGATTTGGCGCGATTAAAATCATCC
AATTATCAACGGTTATCAAAACTCCAATTGCAGCCGTCGAATGAAGAACA
AAGTATATCTGAAAAAGTCACTAAAAATTTAATTAATTTAATAGTGAAAA
CTAATCCGCAATCCATTACTAATTTGAACATGATTCGTAAAGCTCTCAAT
TGTAAATGATTTATACACACACACACGTGTGTGTATGTGTAAT
back to top

protein sequence of SMED30006548-orf-1

>SMED30006548-orf-1 ID=SMED30006548-orf-1|Name=SMED30006548-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=642bp
MDDANNLDKSESTDENDERSETETECFEKTDSEIISQSDNIQEYRCLECN
VNFQIYEDFQKHKVYKHPIVIYKCTIDNCQRWFSSRKSRDKHSENSKSQL
HKSMYFKSPPLNAIFIESATEEQLEILRICKNENFKFLIQRFSDNSSIKS
KYKRGPKPKMSNESDFLVGLPRDQLKRKLMESVVEKLESSTNNKTNQESS
LKFSKRTTIEQTPSTARHGNGNSPKFISKNHRIKSSDCNNKNCTDDVISN
KPKPIPDLSHIKVPILSLDASCTIGKFAEDLINLLTIYDPAEFFKYPLID
YFAPSSSQLGKQIYMKTIHKRLKEGKYCERLENLENDLLLMYGNGFQSFV
EKSQGWCEAGKLYQTALVNIQNAKKKFPASKPTNETSLTLESVKSSDLKS
SSASTILNLMNPYNKGQINDYERIIPIGDQVGTLKSGTQNLAGYKEDRRN
KVTVLSYLDYGTNFSFGPSYDSGNSYCSKETSDSLLRNYSESSCGDDYQC
DESSELATTPEITIGDDFSLYLMNVFTRDFIKSSPPSDWRKADDQSQSTT
PPPNKETDSSTEDNNDAANSSLQTLLDESWKDLARLKSSNYQRLSKLQLQ
PSNEEQSISEKVTKNLINLIVKTNPQSITNLNMIRKALNCK*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0002039p53 binding
GO:0003713transcription coactivator activity
GO:0003714transcription corepressor activity
GO:0070577lysine-acetylated histone binding
GO:0003676nucleic acid binding
GO:0005515protein binding
GO:0046872metal ion binding
Vocabulary: biological process
TermDefinition
GO:0008285negative regulation of cell proliferation
GO:0035066positive regulation of histone acetylation
GO:0045892negative regulation of transcription, DNA-templated
GO:0045893positive regulation of transcription, DNA-templated
GO:2000134negative regulation of G1/S transition of mitotic cell cycle
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0007049cell cycle
GO:0016055Wnt signaling pathway
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036427Bromodomain-like_sf
IPR015880Znf_C2H2-like
IPR021900DUF3512
IPR007087Znf_C2H2
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 72..101
e-value: 18.0
score: 11.0
coord: 44..67
e-value: 2.4
score: 17.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 46..67
IPR021900Protein of unknown function DUF3512PFAMPF12024DUF3512coord: 401..493
e-value: 1.1E-18
score: 67.6
IPR036427Bromodomain-like superfamilyGENE3DG3DSA:1.20.920.10coord: 271..400
e-value: 2.0E-5
score: 26.4
IPR036427Bromodomain-like superfamilySUPERFAMILYSSF47370Bromodomaincoord: 279..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..231
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 401..494
NoneNo IPR availablePANTHERPTHR22881:SF12BROMODOMAIN-CONTAINING PROTEIN 7coord: 401..494