Coiled-coil domain-containing protein 17

Overview
NameCoiled-coil domain-containing protein 17
Smed IDSMED30006210
Length (bp)3844
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Coiled-coil domain-containing protein 17 (SMED30006210) t-SNE clustered cells

Violin plots show distribution of expression levels for Coiled-coil domain-containing protein 17 (SMED30006210) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Coiled-coil domain-containing protein 17 (SMED30006210) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Coiled-coil domain-containing protein 17 (SMED30006210) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30006210

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30006210SMESG000052241.1 SMESG000052237.1 SMESG000052236.1 SMESG000046258.1 SmedASXL_017333SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30006210SMESG000052241.1 SMESG000052237.1 SMESG000052236.1 SMESG000046258.1 dd_Smed_v4_14654_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30006210SMESG000052241.1 SMESG000052237.1 SMESG000052236.1 SMESG000046258.1 dd_Smed_v4_14654_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30006210SMESG000052241.1 SMESG000052237.1 SMESG000052236.1 SMESG000046258.1 dd_Smed_v6_14654_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
reproductive organSMED30006210SMESG000052236.1 SMESG000046258.1 Contig31016newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30006210SMESG000052236.1 SMESG000046258.1 Contig31016uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
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BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Match: V4BHK2 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_234580 PE=4 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 5.429e-127
Identity = 299/932 (32.08%), Postives = 456/932 (48.93%), Query Frame = 3 
Query: 1140 QTISNCPVSRTTFGLIHLSMKS---KSHELSNL--EAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQS-SAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLND---------SPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXX--------------XXXXLITWTAIPLV-------TVRRIAKNIPSHHSXXXXXXXXXXGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPVYEXXXXXXXXXXEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAF-GSLRTVSDLIK------LFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXXXXXXXXXQSYIPENRLLSYQGAY-SSANELKFTQIKPA---------GLTDELFQQMFRIKFQSLVYKFFGE 3776
            Q ++ CP       ++ L         H+ + L   AWT++ LF+E N L  G ++  +   PI+ F+   ++ ++ Q+  A ++YRI+ S  AG +        DS+            +   V + P +           S     L++          P  GFQV RVK    G+G    KV+L+ Y+      G+V  S IGPVTC +  VR++FK   + FG+Q   F         ++ ARFY++                   E E L+ WTA+PLV       T R      PSH       ++IN G H +  +  P    + I F+        K++GRA LK+ IF        + + S++SS+G++   +  W+P +R  P   PY   DG D+YID  R  PDSVT +KV GRIL+R   V G        L SD+YNP +  + E R   + P+STLLLKI+T D   K L + GYA L +F ETGT  QP+ D  G+ +SLN G HQ+R+YS+GPN    P SE +   N I  +P +++L+RI K PK  +G+ L      ++ +  LG+    P+Y D  YYSM C+P +GE ++L   + RP++  RD +    +   + T+ F  S + +   IK      L   P     +LN I  YN  +GFK++ID  +N+PW++F+   + + PPGA Y+      YD+      +DL+ST ++P W +G+K Y RR + + L A+ HL E+ +    ++  + L  QAW  +++F  +Y  T + Q+PL  G+PNQ  L +L  +  K+++  N+ S NI  L  +S+ +R CD+RR  EL              +P NRL+     Y     E K+ + KP          G T E F      KF+SLVYK + E
Sbjct:   32 QPVTRCPPESDLGIVVELQCAGGPGSEHDETRLITRAWTKIPLFNEINSLLVGRYRLPLRTVPIKPFLPSNDLAQIPQYGQAEIYYRIVHSHEAGIHST--STIADSNKETYSLAPQGGIVLQQVNVSPVMVLPPPSASPPLSLYHSRLDNYPMQGNPNLEPLVGFQVDRVKFAEPGEG----KVRLSVYYA---STGKVAQSGIGPVTCSTTAVRSNFKQGYHVFGQQEASFSDIQFQGDMMLIARFYLKKKPAGPDDVYFDNQEVSPYEDETLVAWTALPLVHTHLRDLTARSRVDYDPSH-------MRINTGTHTLKLFAPPTPEASRIPFEDVAYNREWKRYGRATLKINIFQGM-ARPGSLTPSELSSDGEDSIPEYAWLPLDRKRPPSEPYLPGDGFDVYIDGCRFLPDSVTFSKVAGRILDRRYEVYGKDIFTNVKLDSDIYNPIYEHKEEFRDSTIPPTSTLLLKIYTIDSFYKKLTVVGYATLNLFTETGTERQPTVDKAGIQISLNTGAHQLRLYSTGPNGVD-PLSEGYLRNNNIRLIPCSSVLVRIAKVPKGPDGQPLESSKVPQSDWLRLGLWQPRPKYTDRIYYSMKCQPLKGENKLLHGMMKRPQISTRDAV----AQHAQATTGFMKSDKNMEQYIKNQLTKSLDVRPLEQ--DLNLICQYNPKHGFKISIDSAVNLPWSNFTHGHICINPPGAFYLGAPHATYDKLVFTDSIDLRSTNTSPAWRDGFKHYPRRSYHRFLTAVIHLQEIFVSASKDNYKYGLLEQAWTVVQIFKENYTYTTSFQLPLFKGSPNQQFLKQLAREPCKEWMERNIRSHNIRLLEGSSLFVRICDARREDELVTD-----------VPMNRLVDVNTDYIPRGLEEKYDREKPGRALSTLIPQGKTSETFIDNLATKFKSLVYKLYEE 928
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Match: A0A2C9LBM3 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106067643 PE=4 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 5.242e-126
Identity = 293/924 (31.71%), Postives = 469/924 (50.76%), Query Frame = 3 
Query: 1128 LNSIQTISNCPVSRTTFGLIHL----SMKSKSHELSNL--EAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRI----------LQSSAGFNDQVF-----GDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXX---------------XXXLITWTAIPLVTVRRIAKNIPSHHSXXXXXXXXXXGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPVYEXXXXXXXXXXEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTV--SDLIKLFD-EPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXXXXXXXXXQS--YIPENRLLSYQGAYSSANELKFTQIKPAGLTDELFQQMFRIKFQSLVYKFFGE 3776
            + + Q +  CP       ++ L    S     H+ + L   AWT++ LF  ++ L  G  +  +   P++ +I   E+  + Q+  A L+YRI          + + A  N  ++     G  V +   ++P     +       ++    R ++ +     ++   L+  P  GFQV RVK+  +G+G    KV+LTAY+      G+++ S   PV C +  VR++FK   + FG+Q   F+   +    ++ ARFY++     +                E L+ W+AIPLV   +           N   ++IN G H +  YE PV  P ++ +D        +++G+A +++ IF  QP    + + S++S EGD+   +  W+P +R  P   P+H  DG D+YID  R  PDSVT ++V  RIL+R   V G   S    + SD++NP +  R E R+PQ+ PS+TLL K++T D   + L + GYAALKIFVE+GT  QP  D  GV +SLN+G HQ+R+YS GPN    PF+E       + PVP A+LL+RI K PK  +GK L      +  +  LG+    P+Y D  Y+S  C P++GE ++    + R  + +RD + +    +    S+  ++     + L K  D +P +   +LN I+ Y+  +G KLA+D  +N+PWA+F+ A V L PPGA YM      YD+   +  LD +ST ++P W +G+K + RR + + LVAI HL E+ +    ++  + L  QAW  +++F   YC T+  Q+PL  GAPNQ  L +L  +  K+++  N+ ++ ++ L  ASV IR CD+RR  EL         +  +  YIP N    Y              + P G + E F +  ++KF+SLVYK + E
Sbjct:  432 IGARQPVPRCPPESDLGIVVELQAAGSAPGSEHDQTRLITRAWTKIPLFDSQDRLMTGRHRLPLRAVPLKPYIPMHELNTIPQYGEAELYYRIVNMRDAQSQSMATIAATNQDMYQVAPVGGVVLTQVAVSPVPPPPSVSPPGSPMDRFSPRLRNSNRPLIQNLNTTLD--PNIGFQVDRVKHAELGEG----KVRLTAYYQSN---GKIVQSATSPVMCTTTAVRSNFKYFYHVFGQQEASFQDVKMTGDMILVARFYLKKQIKNQIDETEAANTTGPQYGEEALVAWSAIPLVLSMQGELTSRERREFNPSTMRINAGTHILKLYEPPVPEPTNMPYDTLQYYKDARRYGKATVRIHIFQGQP-RPGSLTPSELSDEGDDVLPEFAWLPCDRRTPPSEPFHVGDGFDIYIDGCRFLPDSVTYSRVAARILDRKYEVHGKDISTSVKIDSDIFNPVYEHRAEFREPQIPPSATLLFKVYTIDNFYRQLTVVGYAALKIFVESGTERQPGIDRAGVQISLNEGPHQLRLYSQGPNGVD-PFTEKCMADANVRPVPCASLLVRIAKVPKGPKGKPLVATKVPQADWARLGLWYPRPKYSDRVYFSSQCVPSRGESKLFHAMMKRVPITIRDAVAATTKAKESFLSSDKNMEQYIRNQLTKSMDTKPLDQ--DLNFISQYSPLHGTKLALDSAVNLPWANFTLAHVCLNPPGAFYMGAPHATYDKLTFIEYLDPRSTHTSPAWKDGFKHFPRRSYHRFLVAIIHLQEVFVNVSRDNYKYGLLEQAWTAVQIFKDKYCYTETFQLPLFQGAPNQQMLKQLAREPCKEWMERNIRNRTLKLLDGASVFIRLCDARRDDELLYDVPASKLVHVNVDYIPRNLAEIYSRERPGR---PLESLIPPGKSSEQFMEGLKVKFKSLVYKLYEE 1339
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Match: A0A1I8HFL5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 3.000e-125
Identity = 280/822 (34.06%), Postives = 439/822 (53.41%), Query Frame = 3 
Query: 1443 SSRLNPSLQSDNE---ISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXL---------------------------------ITWTAIPLVTVRRIAKNIPSHHSXXX---XXXXXXXGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPVYEXXXXXXXX--XXEGDEKNIKQ-PWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTVSDLIKLFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXX-XXXXXXXQSYIPENRLLSYQGAYSSANELKFTQIK---PAGLTDELFQQMFRIKFQSLVYKFF 3770
            S R  P+ + D++   +     +E E+   Q  DD  +++  +        GFQV RVK+   G     AK++L+AY+      G+V+ +   PVT  ++ VR++FK + + FG+Q   F   D     V+  RFY++  E     +L                                 + W A+PLV  R    ++   ++ +    +++++NKG H++P +E PV+ P  ++F+     +G + +GRA ++L IFH    Y+ A S +    S EG E N     WIP ER  P L P+H SDG DLY+D  R  PD+VTI K+  R+L R     G + S   SL SD+YNPEF+ R EIR+P L PS+TLL+K++T D+  K LVL G++AL IF++ GT +QP  D  GV ++LN+G HQ+R+Y  GP+    P +E      R+ PV GAT+L+R++KAP   +GK LS     +  +  LG+    P Y D  YYS++CKP+ GE +IL     RPK  +R+++ S+ + R  ET     L   + L K FD     + N+N ++ Y   +GFKL +DGC+N+PW +F+ A   L PPGA Y+ +   AYD+P     LDL ST  +P++   W  ++ R + +++  + HL E+ +        +SL +QAW  +++F+  +  T   Q+PL IG+P+Q  L +L    +  F+   ++   +  +  ASV+++ CD RR  ELT  T D L+ ++Q +IPEN   +Y+       E++ T +K   P G     F +M   KF+SLVY  +
Sbjct:  217 SQRSTPTAERDDKSDVVGADDDLEAELEELQDTDDLTQAERIL--------GFQVDRVKHAEPGT----AKLRLSAYYA---SDGQVVSASNSPVTASTSAVRSNFKSSYHVFGQQEAVFYDVDFSVDMVLILRFYLQPQETVIRSKLEQGGGGGGGGEDFDPDNPLVVKPPTVALSDDNVVAWAAMPLVVPRVNRTSLHGRYADSRYDLRMVRVNKGTHELPLFEPPVIDPQRVAFEHGWVPVGYRPYGRASVRLHIFHP---YQRARSLTPSDDSDEGQEDNPPPLSWIPLERRRPPLDPFHASDGFDLYLDGCRFLPDTVTITKIRSRLLTRRYQAIGNEISCMASLDSDIYNPEFDHRQEIREPDLPPSATLLMKLYTIDRFSKKLVLVGFSALNIFLDIGTEKQPQTDATGVQIALNEGCHQLRIYREGPSGKE-PLTEDLMRRRRLRPVMGATVLVRLYKAPVGHDGKPLSQQQVPEYDWRRLGLQKQKPYYSDRVYYSLTCKPSIGESKILHAHSRRPKTTVREIM-SEIAGRKLETVKESELFVANVLTKQFDMKYKPL-NVNYLSQYVPHHGFKLIVDGCVNLPWHNFTLAHFCLNPPGAFYLGRPHAAYDKPAFTDNLDLTSTNKSPIFNMDWHHFRNRTYHRNMTVVIHLQEIAVTATKQGYQYSLLDQAWTAMQVFENGFVYTDTYQLPLFIGSPSQGLLQQLTRMRLVDFMQAGVSQGYLNLINGASVLVKLCDGRREEELTAVTDDELIVINQDFIPENLQANYK------QEVQGTMLKDMIPPGKEVASFVEMMVKKFKSLVYNLY 1011
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Match: A0A267GFP5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig013049g2 PE=4 SV=1)

HSP 1 Score: 421.394 bits (1082), Expect = 1.054e-124
Identity = 282/822 (34.31%), Postives = 439/822 (53.41%), Query Frame = 3 
Query: 1443 SSRLNPSLQSDNE---ISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXL---------------------------------ITWTAIPLVTVRRIAKNIPSHHSXXX---XXXXXXXGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPVYEXXXXXXXX--XXEGDEKNIKQ-PWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTVSDLIKLFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXX-XXXXXXXQSYIPENRLLSYQGAYSSANELKFTQIK---PAGLTDELFQQMFRIKFQSLVYKFF 3770
            S R  P+ + D++   I     +E E+   Q  DD  +++  +        GFQV RVK+   G     AK++L+AY+      G+V+ +   PVT  ++ VR++FK + + FG+Q   F   D     V+  RFY++  E     +L                                 + W A+PLV  R    ++   ++ +    +++++NKG H++P +E PV+ P  ++F+     +G + +GRA ++L IFH    Y+ A S +    S EG E N     WIP ER  P L P+H SDG DLY+D  R  PD+VTI K+  R+L R     G + S   SL SD+YNPEF+ R EIR+P L PS+TLL+K++T D+  K LVL G++AL IF++ GT +QP  D  GV V+LN+G HQ+R+Y  GP+    P +E      R+ PV GAT+L+R+ KAP   +GK LS     +  +  LG+    P Y D  YYS++CKP+ GE +IL     RPK  +R+++ S+ + R  ET     L   + L K FD     + N+N ++ Y   +GFKL +DGC+N+PW +F+ A   L PPGA Y+ +   AYD+P     LDL ST  +P++   W  ++ R + +++  + HL E+++        +SL +QAW  +++F+  +  T   Q+PL IG+P+Q  L +L    +  F+   ++   +  +  ASV+++ CD RR  ELT  T D L+ ++Q +IPEN   +Y+       E++ T +K   P G     F +M   KF+SLVY  +
Sbjct:  217 SQRSTPTAERDDKSDVIGADDDLEAELEELQDTDDLTQAERIL--------GFQVDRVKHAEPGT----AKLRLSAYYA---SDGQVVSASNSPVTASTSAVRSNFKSSYHVFGQQEAVFYDVDFSVDMVLILRFYLQPQETVIRSKLEQGGGGGGGGEDFDPDNPLVVKPPTVALSDDNVVAWAAMPLVVPRVNRTSLHGRYADSRYDLRMVRVNKGTHELPLFEPPVIDPQRVAFEHGWVPVGYRPYGRASVRLHIFHP---YQRARSLTPSDDSDEGQEDNPPPLSWIPLERRRPPLDPFHASDGFDLYLDGCRFLPDTVTITKIRSRLLTRRYQAIGNEISCMASLDSDIYNPEFDHRQEIREPDLPPSATLLMKLYTIDRFSKKLVLVGFSALNIFLDIGTEKQPQTDATGVQVALNEGCHQLRIYREGPSGKE-PLTEDLMRRRRLRPVMGATVLVRLCKAPVGHDGKPLSQQQVPEYDWRRLGLQKPKPYYSDRVYYSLTCKPSIGESKILHAHSRRPKTTVREIM-SEIAGRKLETVKESELFVANVLTKQFDMKYKPL-NVNYLSQYVPHHGFKLIVDGCVNLPWHNFTLAHFCLNPPGAFYLGRPHAAYDKPAFTDNLDLTSTNKSPIFNMDWHHFRNRTYHRNMTVVIHLQEISVTATKQGYQYSLLDQAWTAMQVFENGFVYTDTYQLPLFIGSPSQGLLQQLTRMRLVDFMQAGVSQGYLNLINGASVLVKLCDGRREEELTAVTDDELIVINQDFIPENLQANYK------QEVQGTILKDMIPPGKEVASFVEMMVKKFKSLVYNLY 1011
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Match: A0A267DVG2 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig013049g1 PE=4 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 7.578e-122
Identity = 282/822 (34.31%), Postives = 439/822 (53.41%), Query Frame = 3 
Query: 1443 SSRLNPSLQSDNE---ISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXL---------------------------------ITWTAIPLVTVRRIAKNIPSHHSXXX---XXXXXXXGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPVYEXXXXXXXX--XXEGDEKNIKQ-PWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTVSDLIKLFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXXXXXX-XXXQSYIPENRLLSYQGAYSSANELKFTQIK---PAGLTDELFQQMFRIKFQSLVYKFF 3770
            S R  P+ + D++   I     +E E+   Q  DD  +++  +        GFQV RVK+   G     AK++L+AY+      G+V+ +   PVT  ++ VR++FK + + FG+Q   F   D     V+  RFY++  E     +L                                 + W A+PLV  R    ++   ++ +    +++++NKG H++P +E PV+ P  ++F+     +G + +GRA ++L IFH    Y+ A S +    S EG E N     WIP ER  P L P+H SDG DLY+D  R  PD+VTI K+  R+L R     G + S   SL SD+YNPEF+ R EIR+P L PS+TLL+K++T D+  K LVL G++AL IF++ GT +QP  D  GV V+LN+G HQ+R+Y  GP+    P +E      R+ PV GAT+L+R++KAP   +GK LS     +  +  LG+    P Y D  YYS++CKP+ GE +IL     RPK  +R+++ S+ + R  ET     L   + L K FD     + N+N ++ Y   +GFKL +DGC+N+PW +F+ A   L PPGA Y+ +   AYD+P     LDL ST  +P++   W  ++ R + +++  + HL E+++        +SL +QAW  +++F+  +  T   Q+PL IG+P+Q  L +L    +  F+   ++   +  +  ASV+++ CD RR  ELT  TD  L  ++Q +IPEN   +Y+       E++ T +K   P G     F +M   KF+SLVY  +
Sbjct:  667 SQRSTPTAERDDKSDVIGADDDLEAELEELQDTDDLTQAERIL--------GFQVDRVKHAEPGT----AKLRLSAYYA---SDGQVVSASNSPVTASTSAVRSNFKSSYHVFGQQEAVFYDVDFSVDMVLILRFYLQPQETVIRSKLEQGGGGGGGGEDFDPDNPLVVKPPTVALSDDNVVAWAAMPLVVPRVNRTSLHGRYADSRYDLRMVRVNKGTHELPLFEPPVIDPQRVAFEHGWVPVGYRPYGRASVRLHIFHP---YQRARSLTPSDDSDEGQEDNPPPLSWIPLERRRPPLDPFHASDGFDLYLDGCRFLPDTVTITKIRSRLLTRRYQAIGNEISCMASLDSDIYNPEFDHRQEIREPDLPPSATLLMKLYTIDRFSKKLVLVGFSALNIFLDIGTEKQPQTDATGVQVALNEGCHQLRIYREGPSGKE-PLTEDLMRRRRLRPVMGATVLVRLYKAPVGHDGKPLSQQQVPEYDWRRLGLQKPKPYYSDRVYYSLTCKPSIGESKILHAHSRRPKTTVREIM-SEIAGRKLETVKESELFVANVLTKQFDMKYKPL-NVNYLSQYVPHHGFKLIVDGCVNLPWHNFTLAHFCLNPPGAFYLGRPHAAYDKPAFTDNLDLTSTNKSPIFNMDWHHFRNRTYHRNMTVVIHLQEISVTATKQGYQYSLLDQAWTAMQVFENGFVYTDTYQLPLFIGSPSQGLLQQLTRMRLVDFMQAGVSQGYLNLINGASVLVKLCDGRREEELTAVTDDELIVINQDFIPENLQANYK------QEVQGTILKDMIPPGKEVASFVEMMVKKFKSLVYNLY 1461
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Match: SMESG000052241.1 (SMESG000052241.1)

HSP 1 Score: 1101.27 bits (2847), Expect = 0.000e+0
Identity = 567/573 (98.95%), Postives = 570/573 (99.48%), Query Frame = 3 
Query: 2058 GQKKFGRAKLKLRIFHTQPVYEXXXXXXXXXXEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRXXXXXXXXXXXXKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTVSDLIKLFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYEXXXXXXXXXXXXQSYIPENRLLSYQGAYSSANELKFTQIKPAGLTDELFQQMFRIKFQSLVYKFFGE 3776
             QKKFGRAKLKLRIFHTQPVYESATSSSDISSEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSD+YNPEFNERIEIRQPQLSPSSTLLLKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVV DPPRYDDGYYYSMSCKPTQGELQILIESLSRPKV+LRDLLNSKWSDRLKETSAFGSLRTVSDLI+LFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYELTPSTDTLLTLDQSYIPENRLL YQGAYSSANELKFTQIKPAGLTDELFQQMFRIKFQSLVYKFFGE
Sbjct:  104 SQKKFGRAKLKLRIFHTQPVYESATSSSDISSEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGRCWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDIYNPEFNERIEIRQPQLSPSSTLLLKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGVLVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKAPKNTEGKILSIHNTTKTHYHSLGVVFDPPRYDDGYYYSMSCKPTQGELQILIESLSRPKVILRDLLNSKWSDRLKETSAFGSLRTVSDLIQLFDEPTNNIFNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLMAYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIKRVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKTKSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYELTPSTDTLLTLDQSYIPENRLLYYQGAYSSANELKFTQIKPAGLTDELFQQMFRIKFQSLVYKFFGE 676
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Match: SMESG000046258.1 (SMESG000046258.1)

HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 3 
Query:  954 NANFTIILDCLTGIFQNVTSATVGFTVYKEYKEFLTPVSIKPVSIRPMKKNDLDLCITLNSIQTISNCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXLITWTAIPLVTVRRIAKNI 1931
            +ANFTIILDCLTGIFQNVTSATVGFTVYKEYKEFLTPVSIKPVSIRPMKKNDLDLCITLNSIQTISNCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIA  I
Sbjct:  225 SANFTIILDCLTGIFQNVTSATVGFTVYKEYKEFLTPVSIKPVSIRPMKKNDLDLCITLNSIQTISNCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIASMI 550

HSP 2 Score: 190.66 bits (483), Expect = 5.080e-51
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 3 
Query:  204 QNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYRLENENVS 506
            +NSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYR   + ++
Sbjct:   15 KNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYRCRKDLIA 115
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Match: SMESG000046258.1 (SMESG000046258.1)

HSP 1 Score: 513.072 bits (1320), Expect = 4.836e-173
Identity = 257/263 (97.72%), Postives = 261/263 (99.24%), Query Frame = 3 
Query: 1143 TISNCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXLITWTAIPLVTVRRIAKNI 1931
            T+ +CPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIA ++
Sbjct:    5 TLISCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIANDL 267
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Match: SMESG000052237.1 (SMESG000052237.1)

HSP 1 Score: 512.686 bits (1319), Expect = 1.361e-172
Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 3 
Query: 1143 TISNCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYXXXXXXXXXXXLITWTAIPLVTVRRIAK 1925
            T+ +CPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISN VTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIAK
Sbjct:    5 TLISCPVSRTTFGLIHLSMKSKSHELSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHNAVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNGVTIEPEITRKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYHTDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFGSVVYARFYMENNENAEMEELITWTAIPLVTVRRIAK 265
[Close]
BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Match: SMESG000052236.1 (SMESG000052236.1)

HSP 1 Score: 396.356 bits (1017), Expect = 4.997e-129
Identity = 200/214 (93.46%), Postives = 202/214 (94.39%), Query Frame = 3 
Query:   18 MESNYFSKINELETLKERKRILRQIRQSKEKLLVESPQVIFPYLKNKLNDDHLANSYQIHRIQNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYRLENENVSIELKNLKDQYLRDGGSNSQLLKDIDALIAEADKSNADKLYSDIDWKETRKN 659
            M SNYFSKINELETLKERKRILRQIRQSKEKLLVESPQVIFPYLKNKL+DDHLANSYQIHRIQNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYR           NLKDQYLRDGGSNSQLLKDIDALIAEADKSNADKLYSDIDWKETRK+
Sbjct:   21 MGSNYFSKINELETLKERKRILRQIRQSKEKLLVESPQVIFPYLKNKLSDDHLANSYQIHRIQNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEFELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQMDVQSYR-----------NLKDQYLRDGGSNSQLLKDIDALIAEADKSNADKLYSDIDWKETRKS 223
The following BLAST results are available for this feature:
BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
V4BHK25.429e-12732.08Uncharacterized protein OS=Lottia gigantea OX=2251... [more]
A0A2C9LBM35.242e-12631.71Uncharacterized protein OS=Biomphalaria glabrata O... [more]
A0A1I8HFL53.000e-12534.06Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267GFP51.054e-12434.31Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267DVG27.578e-12234.31Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain-containing protein 17 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000052241.10.000e+098.95SMESG000052241.1[more]
SMESG000046258.15.080e-5199.08SMESG000046258.1[more]
SMESG000046258.14.836e-17397.72SMESG000046258.1[more]
SMESG000052237.11.361e-17298.47SMESG000052237.1[more]
SMESG000052236.14.997e-12993.46SMESG000052236.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30006210 ID=SMED30006210|Name=Coiled-coil domain-containing protein 17|organism=Schmidtea mediterranea sexual|type=transcript|length=3844bp
GTTTTATATAAAATTGAATGGAATCAAATTATTTTTCAAAAATTAATGAA
CTTGAAACCTTAAAAGAAAGAAAAAGAATTCTTCGACAAATAAGACAATC
GAAGGAAAAGCTGCTTGTTGAAAGTCCTCAAGTTATTTTCCCATATTTGA
AAAATAAATTGAATGACGACCACCTTGCAAATAGCTACCAAATCCATCGC
ATACAAAACAGTCCATTAGAAACTAGGCAACCTCTACCAACTCCCATAAC
AAAATCAGCTAATAATGAAAAAGATTATTTAAAAATAAATCTCCAGAAAA
ATGATGAAATTGAATTTGAATTGCAACAGTTAAGATTGGCGGAAACTCGA
AATAGGCAAGATTTAAATGATCGCTTTGATCAGTTTATGCTTACTCAAGA
AAGCAAAGTGGCTAATGCTTTAGAAGAAATTAAAAGTTATTTTAAATTAA
TCAGCCAGAACCAAATGGATGTTCAGTCCTACAGGTTGGAAAACGAAAAT
GTTAGCATTGAATTAAAGAATCTTAAAGACCAATATTTGAGAGATGGAGG
ATCAAATTCTCAGCTTCTCAAAGATATTGATGCTTTAATTGCAGAGGCTG
ATAAAAGTAATGCTGATAAACTTTATAGTGATATTGATTGGAAAGAAACT
CGAAAAAATATGGCTCTTGCACGAGAAAAAACAATTGCATTACGCGAATT
GGAACGATATAATGCTGAGTTAGAAAGAGAAATTGAAATGAACCGTTTCA
GATCTAATGATTTTAATTTTAAATCAAAAAGTCCTAACATTGATAGTGAT
CTAAAAAACACACTTGAAAGTCTAAGATTGGAAATTCTAAGAATTCAACA
AGAAATATTTAATTTAAAGAAACCAAATCTATCAGAAAATAATAAACCAA
TAAACGAAATGAAAACAGATTTTACACCGAGAAAATTATTAAGTGCTACT
AAAAATGCCAATTTTACAATAATTCTTGACTGTCTCACTGGAATATTTCA
AAATGTCACATCTGCAACTGTTGGTTTTACCGTTTACAAAGAATATAAGG
AATTTTTGACTCCAGTTTCCATAAAGCCGGTTTCTATAAGGCCAATGAAA
AAAAACGATTTGGATTTATGCATAACGTTAAATTCAATTCAAACAATATC
CAATTGCCCAGTTTCACGAACTACTTTTGGTTTAATACATTTGAGCATGA
AATCCAAAAGTCATGAGCTATCAAACCTTGAAGCATGGACAAGATTGGAT
TTGTTTTCGGAAAAAAATGAACTTAGTGAAGGCCATTGGCAAGCTTTGAT
ATACAATTTTCCAATTCAGCGTTTCATTGATGAACAAGAAATGTTGAAAT
TATCACAGTTCCATAATGCTGTTTTACATTACCGAATTCTTCAGTCATCA
GCTGGTTTCAACGACCAAGTCTTTGGCGATTTTGTCGATTCTTCAAGCCG
TTTAAATCCCAGTTTGCAATCTGATAATGAAATTTCGAATGCTGTTACAA
TTGAACCTGAAATCACTAGAAAACAATCATTCGATGATGATGGAGAATCG
GACGTGACAATTGACTTAAATGATTCACCTGAATTCGGGTTTCAAGTGAT
TCGGGTAAAAAACGTCACGATTGGGGATGGTTTTCGATTTGCCAAAGTCC
AATTAACTGCTTATCATACAGACGGTCCTAAAAAAGGTGAAGTTTTGATG
AGTGATATCGGACCAGTTACGTGTTGCTCTAATTTTGTTCGTGCTGATTT
CAAGATGGCTTGTTATCAATTTGGAAAGCAAATCGGCCAATTTAAGAGTT
CTGATTTATTCTTTGGTTCTGTAGTTTATGCTCGATTTTATATGGAAAAT
AATGAAAATGCCGAAATGGAAGAATTAATAACTTGGACTGCTATACCTTT
GGTTACAGTTCGAAGAATTGCAAAGAATATTCCAAGTCATCATTCAATAA
ATCTAAAACTTTTAAAAATCAACAAAGGTCTACACGATATTCCATTTTAT
GAGAACCCGGTCGTTGCACCAAATTCAATAAGTTTTGATAGAAAAGGCGA
TATAATTGGCCAAAAGAAATTTGGAAGAGCTAAACTAAAATTAAGGATTT
TTCATACTCAACCTGTTTATGAATCTGCTACATCAAGTAGTGATATTTCA
AGTGAAGGTGACGAAAAGAATATTAAACAACCTTGGATTCCCAATGAAAG
ATCTGAACCTTTTTTATTACCATATCACCAAAGTGATGGAATAGACCTGT
ATATCGACTCTGGTCGATGTTGGCCAGATAGTGTTACAATAGCAAAAGTT
GAAGGTCGGATATTGAATCGAGATCTTGTTGTCCAAGGACCAAAGTTTTC
AGCTTTTACATCTCTTTCATCTGACGTATACAATCCAGAATTCAATGAAC
GAATTGAAATTCGTCAACCACAATTATCACCATCCTCAACTTTACTATTA
AAAATTTTTACGTTTGACAAAGAGGAAAAAAACCTGGTACTGTTTGGATA
TGCGGCTTTAAAAATATTTGTAGAAACCGGCACCAATGAGCAACCATCAT
TTGATGATTTAGGAGTTCTAGTATCTTTAAATGACGGAGGTCACCAAATT
CGAGTTTATTCCTCTGGTCCTAATCCAACAACCTTTCCATTTTCTGAATC
CTGGTTTGAAATAAATCGCATTGCTCCAGTTCCCGGAGCCACATTACTAA
TACGAATCTTTAAAGCGCCGAAAAATACAGAAGGAAAAATATTAAGTATT
CATAATACAACTAAAACTCATTATCATTCCCTCGGGGTAGTTCTTGACCC
TCCGAGATATGATGACGGCTACTATTACTCAATGAGTTGTAAACCAACTC
AGGGAGAATTACAGATTTTAATTGAAAGTTTATCACGTCCTAAAGTAGTA
CTTCGAGATTTACTAAATTCAAAGTGGAGTGATAGATTGAAAGAAACTTC
TGCTTTTGGTAGTTTGCGCACCGTTTCGGATCTCATTAAACTGTTTGATG
AACCTACTAACAATATTTTCAACCTGAATCGTATCGCTCACTACAACGCC
AGCTATGGATTTAAATTGGCCATTGATGGATGCATCAATATACCGTGGGC
ATCATTTTCAGGAGCAACTGTTGTACTTTATCCTCCTGGCGCTATGTATA
TGAATAAACTTTTAATGGCCTACGATAGACCGTTCTTAGTGTCACAATTG
GACCTTAAAAGTACACCATCAGCGCCTTTGTGGACAAATGGCTGGAAGAC
ATATAAAAGAAGAAAATTTGATAAACATTTGGTAGCAATATTTCACCTGC
ACGAAATGAATATTAAAAGAGTTGGAAATGATAATATTTTTTCATTGGAA
AATCAAGCCTGGGTACCGATTGAACTATTTGATTTCTCCTATTGTATCAC
AAAAGCTGTGCAAATGCCTCTCATTATTGGTGCCCCAAACCAAGTGCATT
TAAATGAATTGAAAACTAAATCAGTTAAACAATTTCTTACTGATAATTTA
GCATCAAAAAATATAGAATATTTGGGAAATGCATCAGTTATAATTAGACA
ATGTGATTCTAGAAGATCTTACGAATTGACTCCTTCGACTGATACTTTGT
TAACGCTTGATCAATCTTATATCCCTGAAAACAGATTGCTTTCCTACCAA
GGCGCTTACAGTTCAGCTAATGAGCTGAAATTTACTCAGATAAAGCCAGC
AGGTTTGACTGATGAATTATTTCAACAAATGTTCAGAATTAAATTTCAAA
GTCTTGTGTACAAATTCTTTGGTGAAAATGAATTCAATTTAAATTAATCT
AACTGAAATCGAAAAACCTTTTGGTCTCAATATTGTGATAAAAT
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protein sequence of SMED30006210-orf-1

>SMED30006210-orf-1 ID=SMED30006210-orf-1|Name=SMED30006210-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1260bp
MESNYFSKINELETLKERKRILRQIRQSKEKLLVESPQVIFPYLKNKLND
DHLANSYQIHRIQNSPLETRQPLPTPITKSANNEKDYLKINLQKNDEIEF
ELQQLRLAETRNRQDLNDRFDQFMLTQESKVANALEEIKSYFKLISQNQM
DVQSYRLENENVSIELKNLKDQYLRDGGSNSQLLKDIDALIAEADKSNAD
KLYSDIDWKETRKNMALAREKTIALRELERYNAELEREIEMNRFRSNDFN
FKSKSPNIDSDLKNTLESLRLEILRIQQEIFNLKKPNLSENNKPINEMKT
DFTPRKLLSATKNANFTIILDCLTGIFQNVTSATVGFTVYKEYKEFLTPV
SIKPVSIRPMKKNDLDLCITLNSIQTISNCPVSRTTFGLIHLSMKSKSHE
LSNLEAWTRLDLFSEKNELSEGHWQALIYNFPIQRFIDEQEMLKLSQFHN
AVLHYRILQSSAGFNDQVFGDFVDSSSRLNPSLQSDNEISNAVTIEPEIT
RKQSFDDDGESDVTIDLNDSPEFGFQVIRVKNVTIGDGFRFAKVQLTAYH
TDGPKKGEVLMSDIGPVTCCSNFVRADFKMACYQFGKQIGQFKSSDLFFG
SVVYARFYMENNENAEMEELITWTAIPLVTVRRIAKNIPSHHSINLKLLK
INKGLHDIPFYENPVVAPNSISFDRKGDIIGQKKFGRAKLKLRIFHTQPV
YESATSSSDISSEGDEKNIKQPWIPNERSEPFLLPYHQSDGIDLYIDSGR
CWPDSVTIAKVEGRILNRDLVVQGPKFSAFTSLSSDVYNPEFNERIEIRQ
PQLSPSSTLLLKIFTFDKEEKNLVLFGYAALKIFVETGTNEQPSFDDLGV
LVSLNDGGHQIRVYSSGPNPTTFPFSESWFEINRIAPVPGATLLIRIFKA
PKNTEGKILSIHNTTKTHYHSLGVVLDPPRYDDGYYYSMSCKPTQGELQI
LIESLSRPKVVLRDLLNSKWSDRLKETSAFGSLRTVSDLIKLFDEPTNNI
FNLNRIAHYNASYGFKLAIDGCINIPWASFSGATVVLYPPGAMYMNKLLM
AYDRPFLVSQLDLKSTPSAPLWTNGWKTYKRRKFDKHLVAIFHLHEMNIK
RVGNDNIFSLENQAWVPIELFDFSYCITKAVQMPLIIGAPNQVHLNELKT
KSVKQFLTDNLASKNIEYLGNASVIIRQCDSRRSYELTPSTDTLLTLDQS
YIPENRLLSYQGAYSSANELKFTQIKPAGLTDELFQQMFRIKFQSLVYKF
FGENEFNLN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000099neuron
PLANA:0000418head
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR038800CCDC17
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availableCOILSCoilCoilcoord: 212..243
NoneNo IPR availableCOILSCoilCoilcoord: 150..170
IPR038800Coiled-coil domain-containing protein 17PANTHERPTHR33820FAMILY NOT NAMEDcoord: 719..1153
coord: 91..496