SMED30006146

Overview
NameSMED30006146
Smed IDSMED30006146
Length (bp)1273
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30006146 (SMED30006146) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30006146 (SMED30006146) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30006146 (SMED30006146) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30006146 (SMED30006146) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30006146

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30006146SMESG000032810.1 SmedASXL_006651SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30006146SMESG000032810.1 dd_Smed_v4_6374_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30006146 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.002967:52700..54519 +6158
v31.011786:12647..14466 +6153
Homology
BLAST of SMED30006146 vs. Ensembl Human
Match: RCOR3 (REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594])

HSP 1 Score: 56.6102 bits (135), Expect = 3.847e-9
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK 
Sbjct:   64 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 133          
BLAST of SMED30006146 vs. Ensembl Human
Match: RCOR3 (REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594])

HSP 1 Score: 57.3806 bits (137), Expect = 2.315e-8
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK 
Sbjct:  154 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 223          
BLAST of SMED30006146 vs. Ensembl Human
Match: RCOR3 (REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594])

HSP 1 Score: 57.3806 bits (137), Expect = 2.911e-8
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:   67 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 132          
BLAST of SMED30006146 vs. Ensembl Human
Match: RCOR3 (REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594])

HSP 1 Score: 56.9954 bits (136), Expect = 3.334e-8
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  122 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 190          
BLAST of SMED30006146 vs. Ensembl Human
Match: RCOR3 (REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594])

HSP 1 Score: 56.9954 bits (136), Expect = 3.448e-8
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  125 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 190          
BLAST of SMED30006146 vs. Ensembl Fly
Match: CoRest (gene:FBgn0261573 transcript:FBtr0336667)

HSP 1 Score: 58.5362 bits (140), Expect = 2.637e-9
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. Ensembl Fly
Match: CoRest (gene:FBgn0261573 transcript:FBtr0302861)

HSP 1 Score: 58.5362 bits (140), Expect = 2.831e-9
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. Ensembl Fly
Match: CoRest (gene:FBgn0261573 transcript:FBtr0302860)

HSP 1 Score: 58.5362 bits (140), Expect = 2.831e-9
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. Ensembl Fly
Match: CoRest (gene:FBgn0261573 transcript:FBtr0302859)

HSP 1 Score: 58.5362 bits (140), Expect = 2.831e-9
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. Ensembl Fly
Match: CoRest (gene:FBgn0261573 transcript:FBtr0302864)

HSP 1 Score: 58.151 bits (139), Expect = 9.356e-9
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. Ensembl Zebrafish
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:402934])

HSP 1 Score: 57.7658 bits (138), Expect = 1.401e-9
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:   66 MLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKTRT 137          
BLAST of SMED30006146 vs. Ensembl Zebrafish
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:402934])

HSP 1 Score: 58.151 bits (139), Expect = 1.734e-9
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:  104 MLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKTRT 175          
BLAST of SMED30006146 vs. Ensembl Zebrafish
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:402934])

HSP 1 Score: 57.7658 bits (138), Expect = 1.857e-9
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:   66 MLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKTRT 137          
BLAST of SMED30006146 vs. Ensembl Zebrafish
Match: rcor3 (REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371])

HSP 1 Score: 54.6842 bits (130), Expect = 2.782e-9
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  111 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKK 176          

HSP 2 Score: 26.1794 bits (56), Expect = 2.782e-9
Identity = 20/64 (31.25%), Postives = 31/64 (48.44%), Query Frame = 1
Query:   97 ISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLWSTSFVRSQDKLQETISNARIHYKAYKVAQ 288
            + VG D+QA +P+ +  SS  Y    K    +++WS        KL E I+ A+  +  Y V Q
Sbjct:   45 MRVGSDYQANIPEFDPGSS-KYSD--KDSGGMLVWSPHHTILDSKLDEYIAIAKEKH-GYNVEQ 104          
BLAST of SMED30006146 vs. Ensembl Zebrafish
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:402934])

HSP 1 Score: 57.3806 bits (137), Expect = 1.713e-8
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:  104 MLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKTRT 175          
BLAST of SMED30006146 vs. Ensembl Xenopus
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:100038078])

HSP 1 Score: 54.6842 bits (130), Expect = 1.238e-11
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK D++    DL N+ P  + W+  D+  F  A   H K F  I+++ P+K I  LV  YY +KK 
Sbjct:  107 MLLWHKHDVERSLADLANFTPFPEEWSVEDKVLFEQAFSFHGKCFQRIQQMLPDKLIPSLVKYYYSWKKT 176          

HSP 2 Score: 35.039 bits (79), Expect = 1.238e-11
Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   19 SVMLTRNRLTSHSLSEIDQG-----SFKNAVISVGKDFQAKLPQLE-KLSSINYYKCLKRKYEVMLWSTSFVRSQDKLQETISNARIHYKAYKVAQ 288
            S +++RNR+ S SL   ++      + ++++I VG D+QA++P+ + + SS +    LK    +++WS S   S  KL E I+ A+  +  Y V Q
Sbjct:   12 SAVISRNRVKSDSLGNSEEESSEDEAPRDSMIRVGSDYQAQIPECKPEYSSPSSNVELK---GMLVWSPSQFVSDAKLNEYITMAKEKH-GYNVEQ 103          
BLAST of SMED30006146 vs. Ensembl Xenopus
Match: RCOR3 (REST corepressor 3 [Source:NCBI gene;Acc:779496])

HSP 1 Score: 55.8398 bits (133), Expect = 5.981e-8
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK 
Sbjct:  110 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSIASLVKYYYSWKKT 176          
BLAST of SMED30006146 vs. Ensembl Xenopus
Match: RCOR3 (REST corepressor 3 [Source:NCBI gene;Acc:779496])

HSP 1 Score: 55.8398 bits (133), Expect = 7.137e-8
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK 
Sbjct:   57 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSIASLVKYYYSWKKT 123          
BLAST of SMED30006146 vs. Ensembl Xenopus
Match: RCOR3 (REST corepressor 3 [Source:NCBI gene;Acc:779496])

HSP 1 Score: 55.4546 bits (132), Expect = 7.648e-8
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK 
Sbjct:  108 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSIASLVKYYYSWKKT 177          
BLAST of SMED30006146 vs. Ensembl Xenopus
Match: RCOR3 (REST corepressor 3 [Source:NCBI gene;Acc:779496])

HSP 1 Score: 55.4546 bits (132), Expect = 8.238e-8
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK 
Sbjct:  111 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSIASLVKYYYSWKKT 177          
BLAST of SMED30006146 vs. Ensembl Mouse
Match: Rcor3 (REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920])

HSP 1 Score: 57.3806 bits (137), Expect = 2.015e-8
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  120 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 188          
BLAST of SMED30006146 vs. Ensembl Mouse
Match: Rcor3 (REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920])

HSP 1 Score: 57.3806 bits (137), Expect = 2.015e-8
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  120 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 188          
BLAST of SMED30006146 vs. Ensembl Mouse
Match: Rcor3 (REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920])

HSP 1 Score: 57.3806 bits (137), Expect = 2.301e-8
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  123 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 188          
BLAST of SMED30006146 vs. Ensembl Mouse
Match: Rcor3 (REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920])

HSP 1 Score: 57.3806 bits (137), Expect = 2.301e-8
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:  123 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 188          
BLAST of SMED30006146 vs. Ensembl Mouse
Match: Rcor3 (REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920])

HSP 1 Score: 56.6102 bits (135), Expect = 2.329e-8
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK 
Sbjct:  120 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 189          
BLAST of SMED30006146 vs. UniProt/SwissProt
Match: sp|Q6NRZ0|RCOR2_XENLA (REST corepressor 2 OS=Xenopus laevis OX=8355 GN=rcor2 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 9.833e-11
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK D++    DL N+ P  + W+  D+  F  A   H K+F  I+++ P K I  LV  YY +KK 
Sbjct:  107 MLLWHKHDVERSLADLANFTPFPEEWSVEDKVLFEQAFSFHGKSFQRIQQMLPEKLIPSLVKYYYSWKKT 176          

HSP 2 Score: 33.4982 bits (75), Expect = 9.833e-11
Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 SVMLTRNRLTSHSLSEIDQG-----SFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLWSTSFVRSQDKLQETISNARIHYKAYKVAQ 288
            S +++RNR  S SL   ++      + ++++I VG D+QA++P+  K  + +    ++ K  +++WS S   S  KL E I+ A+  +  Y V Q
Sbjct:   12 SAVISRNRAKSDSLGNSEEESSEDEAPRDSMIRVGSDYQAQIPEC-KPDNTSPSGNVELKG-MLVWSPSQFVSDAKLNEYITMAKEKH-GYNVEQ 103          
BLAST of SMED30006146 vs. UniProt/SwissProt
Match: sp|Q59E36|RCOR_DROME (REST corepressor OS=Drosophila melanogaster OX=7227 GN=CoRest PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 9.379e-8
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK DL+    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  159 WHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKK 224          
BLAST of SMED30006146 vs. UniProt/SwissProt
Match: sp|Q90WN5|RCOR1_XENLA (REST corepressor 1 OS=Xenopus laevis OX=8355 GN=rcor1 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.407e-8
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL+N+ P  D W   DR  F  A   H K F+ I+++ P+K+I  LV  YY +KK
Sbjct:  119 WHKHNIEKSLADLLNFTPFPDEWTVEDRVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKK 184          
BLAST of SMED30006146 vs. UniProt/SwissProt
Match: sp|Q6P116|RCOR2_DANRE (REST corepressor 2 OS=Danio rerio OX=7955 GN=rcor2 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.293e-7
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:  104 MLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKTRT 175          
BLAST of SMED30006146 vs. UniProt/SwissProt
Match: sp|Q5ZJ40|RCOR3_CHICK (REST corepressor 3 OS=Gallus gallus OX=9031 GN=RCOR3 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.623e-7
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+KTI  LV  YY +KK
Sbjct:   64 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 132          
BLAST of SMED30006146 vs. TrEMBL
Match: A0A4E0RZY1 (REST corepressor 3 OS=Fasciola hepatica OX=6192 GN=D915_003948 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.487e-18
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 2
Query:  254 QEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNV 508
            +E    L+ WHK D    ++DL N+ P K  W  ++R  FF+ALD +NK F+ IK+LFP +T+ +L+  YYL K+N   L +M++
Sbjct:   85 EEQALALLTWHKADFHRAKSDLPNFSPLKYEWTPSERRVFFVALDYYNKQFHKIKKLFPTRTVNELILFYYLNKRNQQTLYEMSL 169          

HSP 2 Score: 48.521 bits (114), Expect = 1.487e-18
Identity = 29/61 (47.54%), Postives = 34/61 (55.74%), Query Frame = 1
Query:   19 SVMLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLW 201
            S MLTR RL S S S  DQ +F+NAVI VG DFQ  LP  +   ++N      R   V LW
Sbjct:    2 SEMLTRGRL-SQSFSNSDQDAFENAVIRVGIDFQVDLPPFQGEPTLNIQNEPDRG--VALW 59          
BLAST of SMED30006146 vs. TrEMBL
Match: A0A504Z712 (REST corepressor 3 OS=Fasciola gigantica OX=46835 GN=FGIG_10497 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.562e-18
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 2
Query:  254 QEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNV 508
            +E    L+ WHK D    ++DL N+ P K  W  ++R  FF+ALD +NK F+ IK+LFP +T+ +L+  YYL K+N   L +M++
Sbjct:   85 EEQALALLTWHKADFHRAKSDLPNFSPLKYEWTPSERRVFFVALDYYNKQFHKIKKLFPTRTVNELILFYYLNKRNQQTLYEMSL 169          

HSP 2 Score: 48.521 bits (114), Expect = 1.562e-18
Identity = 29/61 (47.54%), Postives = 34/61 (55.74%), Query Frame = 1
Query:   19 SVMLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLW 201
            S MLTR RL S S S  DQ +F+NAVI VG DFQ  LP  +   ++N      R   V LW
Sbjct:    2 SEMLTRGRL-SQSFSNSDQDAFENAVIRVGIDFQVDLPPFQGEPTLNIQNEPDRG--VALW 59          
BLAST of SMED30006146 vs. TrEMBL
Match: A0A0X3PK00 (ELM2 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR119906 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.405e-14
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 2
Query:  254 QEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNV 508
            +E    L+ WHK DL     D  N+ P+K  W   +R  FF ALD + K F+ +K+LFP +T  +LV  YYL K+N   L ++ +
Sbjct:  128 EEQALALLTWHKFDLQRAAADFHNFSPRKYDWTHKERRIFFAALDFYCKQFHKVKKLFPKRTTCELVLFYYLNKRNQQTLYELTL 212          

HSP 2 Score: 45.0542 bits (105), Expect = 1.405e-14
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 1
Query:   22 VMLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLW 201
             MLTR RLT   +++ DQ +F+NA I +G D+QA LP  +      + +   R  E++LW
Sbjct:   46 AMLTRGRLT-EVVTDSDQNAFENAFIRIGPDYQAFLPVADPKYPEQFVQAADR--EILLW 102          
BLAST of SMED30006146 vs. TrEMBL
Match: A0A0X3P8S3 (ELM2 domain-containing protein (Fragment) OS=Schistocephalus solidus OX=70667 GN=TR119906 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.464e-14
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 2
Query:  254 QEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNV 508
            +E    L+ WHK DL     D  N+ P+K  W   +R  FF ALD + K F+ +K+LFP +T  +LV  YYL K+N   L ++ +
Sbjct:  110 EEQALALLTWHKFDLQRAAADFHNFSPRKYDWTHKERRIFFAALDFYCKQFHKVKKLFPKRTTCELVLFYYLNKRNQQTLYELTL 194          

HSP 2 Score: 45.0542 bits (105), Expect = 1.464e-14
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 1
Query:   22 VMLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLW 201
             MLTR RLT   +++ DQ +F+NA I +G D+QA LP  +      + +   R  E++LW
Sbjct:   28 AMLTRGRLTE-VVTDSDQNAFENAFIRIGPDYQAFLPVADPKYPEQFVQAADR--EILLW 84          
BLAST of SMED30006146 vs. TrEMBL
Match: A0A0X3PR84 (REST corepressor 2 OS=Schistocephalus solidus OX=70667 GN=RCOR2 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.540e-14
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 2
Query:  254 QEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNV 508
            +E    L+ WHK DL     D  N+ P+K  W   +R  FF ALD + K F+ +K+LFP +T  +LV  YYL K+N   L ++ +
Sbjct:   82 EEQALALLTWHKFDLQRAAADFHNFSPRKYDWTHKERRIFFAALDFYCKQFHKVKKLFPKRTTCELVLFYYLNKRNQQTLYELTL 166          

HSP 2 Score: 45.0542 bits (105), Expect = 1.540e-14
Identity = 23/59 (38.98%), Postives = 35/59 (59.32%), Query Frame = 1
Query:   25 MLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLSSINYYKCLKRKYEVMLW 201
            MLTR RLT   +++ DQ +F+NA I +G D+QA LP  +      + +   R  E++LW
Sbjct:    1 MLTRGRLT-EVVTDSDQNAFENAFIRIGPDYQAFLPVADPKYPEQFVQAADR--EILLW 56          
BLAST of SMED30006146 vs. Ensembl Cavefish
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:103025587])

HSP 1 Score: 58.151 bits (139), Expect = 9.063e-9
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:  108 MLLWHKHDVERSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKLISSLVKYYYSWKKTRT 179          
BLAST of SMED30006146 vs. Ensembl Cavefish
Match: ENSAMXT00000004792.2 (pep primary_assembly:Astyanax_mexicanus-2.0:5:139106:154149:-1 gene:ENSAMXG00000004677.2 transcript:ENSAMXT00000004792.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.0694 bits (131), Expect = 6.675e-8
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  111 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKK 179          
BLAST of SMED30006146 vs. Ensembl Cavefish
Match: rcor1 (REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79])

HSP 1 Score: 53.5286 bits (127), Expect = 2.033e-7
Identity = 24/69 (34.78%), Postives = 38/69 (55.07%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F      H K F+ I+++ P+K+I  LV  YY +KK
Sbjct:  118 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQGFSFHGKTFHRIQQMLPDKSIASLVRFYYSWKK 186          
BLAST of SMED30006146 vs. Ensembl Sea Lamprey
Match: rcor1 (REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79])

HSP 1 Score: 62.3882 bits (150), Expect = 5.581e-11
Identity = 27/78 (34.62%), Postives = 44/78 (56.41%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMN 505
            L+ WH  +++    D+ N+ P  D W   +RA F  A   H K+F++I+++ P K+IG LV  YY +K+  T    M+
Sbjct:  166 LLLWHAHNIERSLADMPNFAPDADEWGETERALFEQAYGFHGKSFHLIQQMLPGKSIGSLVRHYYTWKQTRTRTSVMD 243          
BLAST of SMED30006146 vs. Ensembl Sea Lamprey
Match: rcor1 (REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79])

HSP 1 Score: 59.6918 bits (143), Expect = 7.201e-11
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+IG LV  YY +KK  T
Sbjct:   49 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSIGSLVRYYYAWKKTRT 120          
BLAST of SMED30006146 vs. Ensembl Sea Lamprey
Match: rcor1 (REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79])

HSP 1 Score: 62.003 bits (149), Expect = 7.304e-11
Identity = 26/72 (36.11%), Postives = 42/72 (58.33%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            L+ WH  +++    D+ N+ P  D W   +RA F  A   H K+F++I+++ P K+IG LV  YY +K+  T
Sbjct:  137 LLLWHAHNIERSLADMPNFAPDADEWGETERALFEQAYGFHGKSFHLIQQMLPGKSIGSLVRHYYTWKQTRT 208          
BLAST of SMED30006146 vs. Ensembl Nematostella
Match: EDO33362 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF7])

HSP 1 Score: 58.151 bits (139), Expect = 1.880e-9
Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W+  D+  F  A  SH K+F  I+++ P+K++  LV  YY +KK 
Sbjct:   70 MLFWHKHNIEKSLTDLANFTPFPDEWSLEDKVLFEQAFGSHGKSFRRIQQMLPDKSVSSLVKYYYSWKKT 139          
BLAST of SMED30006146 vs. Ensembl Medaka
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:101173414])

HSP 1 Score: 60.077 bits (144), Expect = 2.341e-9
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 2
Query:  242 LFLMQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            L L + F   ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:   92 LPLCKTFWNCMLLWHKHDVERSLADLANFTPFPDEWTIEDKVLFEQAFSFHGKSFHRIQQMLPDKLISSLVKYYYSWKKTRT 173          
BLAST of SMED30006146 vs. Ensembl Medaka
Match: rcor2 (REST corepressor 2 [Source:NCBI gene;Acc:101173414])

HSP 1 Score: 58.151 bits (139), Expect = 8.914e-9
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVT 487
            ++ WHK D++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K I  LV  YY +KK  T
Sbjct:  109 MLLWHKHDVERSLADLANFTPFPDEWTIEDKVLFEQAFSFHGKSFHRIQQMLPDKLISSLVKYYYSWKKTRT 180          
BLAST of SMED30006146 vs. Ensembl Medaka
Match: rcor1 (REST corepressor 1 [Source:NCBI gene;Acc:101161362])

HSP 1 Score: 56.225 bits (134), Expect = 3.336e-8
Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKN 481
            ++ WHK +++    DL N+ P  D W   DR  F  A   H K+F+ I+++ P+K++  LV  YY +KK+
Sbjct:  113 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDRVLFEQAFSFHGKSFHRIQQMLPDKSMASLVRFYYSWKKS 182          
BLAST of SMED30006146 vs. Ensembl Medaka
Match: rcor3 (REST corepressor 3 [Source:NCBI gene;Acc:101170567])

HSP 1 Score: 55.0694 bits (131), Expect = 8.689e-8
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 2
Query:  281 WHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  164 WHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKK 229          
BLAST of SMED30006146 vs. Ensembl Medaka
Match: rcor3 (REST corepressor 3 [Source:NCBI gene;Acc:101170567])

HSP 1 Score: 54.6842 bits (130), Expect = 9.886e-8
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 2
Query:  272 LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKK 478
            ++ WHK +++    DL N+ P  D W   D+  F  A   H K+F+ I+++ P+K+I  LV  YY +KK
Sbjct:  161 MLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKK 229          
BLAST of SMED30006146 vs. Planmine SMEST
Match: SMESG000032810.1 (SMESG000032810.1)

HSP 1 Score: 739.954 bits (1909), Expect = 0.000e+0
Identity = 356/357 (99.72%), Postives = 357/357 (100.00%), Query Frame = 2
Query:  185 MKLCCGVRVLYDHKINYKKLFLMQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDILNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 1255
            MKLCCGVRVLYDHKINYKKLFLMQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHD+LNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA
Sbjct:    1 MKLCCGVRVLYDHKINYKKLFLMQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDVLNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 357          
BLAST of SMED30006146 vs. Planmine SMEST
Match: SMESG000032810.1 (SMESG000032810.1)

HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0
Identity = 355/362 (98.07%), Postives = 357/362 (98.62%), Query Frame = 2
Query:  185 MKLCCGVRVLYDHKINYKKLFLMQEFTTR-----LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDILNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 1255
            MKLCCGVRVLYDHKINYKKLFLMQEFTT+     LIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHD+LNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA
Sbjct:    1 MKLCCGVRVLYDHKINYKKLFLMQEFTTKEMTLGLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDVLNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 362          
BLAST of SMED30006146 vs. Planmine SMEST
Match: SMESG000032810.1 (SMESG000032810.1)

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 334/335 (99.70%), Postives = 335/335 (100.00%), Query Frame = 2
Query:  251 MQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDILNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 1255
            MQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHD+LNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA
Sbjct:    1 MQEFTTRLIKWHKGDLDAVQNDLMNYVPKKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNVTVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSNNLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFDQGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDVLNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQLAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLLSNSANKA 335          
The following BLAST results are available for this feature:
BLAST of SMED30006146 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RCOR33.847e-937.14REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25... [more]
RCOR32.315e-837.14REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25... [more]
RCOR32.911e-839.39REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25... [more]
RCOR33.334e-837.68REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25... [more]
RCOR33.448e-839.39REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25... [more]
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BLAST of SMED30006146 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006146 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CoRest2.637e-940.91gene:FBgn0261573 transcript:FBtr0336667[more]
CoRest2.831e-940.91gene:FBgn0261573 transcript:FBtr0302861[more]
CoRest2.831e-940.91gene:FBgn0261573 transcript:FBtr0302860[more]
CoRest2.831e-940.91gene:FBgn0261573 transcript:FBtr0302859[more]
CoRest9.356e-940.91gene:FBgn0261573 transcript:FBtr0302864[more]
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BLAST of SMED30006146 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rcor21.401e-937.50REST corepressor 2 [Source:NCBI gene;Acc:402934][more]
rcor21.734e-937.50REST corepressor 2 [Source:NCBI gene;Acc:402934][more]
rcor21.857e-937.50REST corepressor 2 [Source:NCBI gene;Acc:402934][more]
rcor32.782e-937.88REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-05020... [more]
rcor21.713e-837.50REST corepressor 2 [Source:NCBI gene;Acc:402934][more]
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BLAST of SMED30006146 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rcor21.238e-1135.71REST corepressor 2 [Source:NCBI gene;Acc:100038078... [more]
RCOR35.981e-837.31REST corepressor 3 [Source:NCBI gene;Acc:779496][more]
RCOR37.137e-837.31REST corepressor 3 [Source:NCBI gene;Acc:779496][more]
RCOR37.648e-835.71REST corepressor 3 [Source:NCBI gene;Acc:779496][more]
RCOR38.238e-837.31REST corepressor 3 [Source:NCBI gene;Acc:779496][more]
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BLAST of SMED30006146 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rcor32.015e-837.68REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441... [more]
Rcor32.015e-837.68REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441... [more]
Rcor32.301e-839.39REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441... [more]
Rcor32.301e-839.39REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441... [more]
Rcor32.329e-837.14REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441... [more]
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BLAST of SMED30006146 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6NRZ0|RCOR2_XENLA9.833e-1135.71REST corepressor 2 OS=Xenopus laevis OX=8355 GN=rc... [more]
sp|Q59E36|RCOR_DROME9.379e-840.91REST corepressor OS=Drosophila melanogaster OX=722... [more]
sp|Q90WN5|RCOR1_XENLA9.407e-839.39REST corepressor 1 OS=Xenopus laevis OX=8355 GN=rc... [more]
sp|Q6P116|RCOR2_DANRE1.293e-737.50REST corepressor 2 OS=Danio rerio OX=7955 GN=rcor2... [more]
sp|Q5ZJ40|RCOR3_CHICK1.623e-737.68REST corepressor 3 OS=Gallus gallus OX=9031 GN=RCO... [more]
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BLAST of SMED30006146 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0RZY11.487e-1841.18REST corepressor 3 OS=Fasciola hepatica OX=6192 GN... [more]
A0A504Z7121.562e-1841.18REST corepressor 3 OS=Fasciola gigantica OX=46835 ... [more]
A0A0X3PK001.405e-1438.82ELM2 domain-containing protein OS=Schistocephalus ... [more]
A0A0X3P8S31.464e-1438.82ELM2 domain-containing protein (Fragment) OS=Schis... [more]
A0A0X3PR841.540e-1438.82REST corepressor 2 OS=Schistocephalus solidus OX=7... [more]
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BLAST of SMED30006146 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rcor29.063e-937.50REST corepressor 2 [Source:NCBI gene;Acc:103025587... [more]
ENSAMXT00000004792.26.675e-836.23pep primary_assembly:Astyanax_mexicanus-2.0:5:1391... [more]
rcor12.033e-734.78REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-05050... [more]
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BLAST of SMED30006146 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rcor15.581e-1134.62REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-05050... [more]
rcor17.201e-1137.50REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-05050... [more]
rcor17.304e-1136.11REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-05050... [more]
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BLAST of SMED30006146 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30006146 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO333621.880e-935.71Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30006146 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rcor22.341e-936.59REST corepressor 2 [Source:NCBI gene;Acc:101173414... [more]
rcor28.914e-937.50REST corepressor 2 [Source:NCBI gene;Acc:101173414... [more]
rcor13.336e-835.71REST corepressor 1 [Source:NCBI gene;Acc:101161362... [more]
rcor38.689e-837.88REST corepressor 3 [Source:NCBI gene;Acc:101170567... [more]
rcor39.886e-836.23REST corepressor 3 [Source:NCBI gene;Acc:101170567... [more]
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BLAST of SMED30006146 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000032810.10.000e+099.72SMESG000032810.1[more]
SMESG000032810.10.000e+098.07SMESG000032810.1[more]
SMESG000032810.10.000e+099.70SMESG000032810.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30006146 ID=SMED30006146|Name=SMED30006146|organism=Schmidtea mediterranea sexual|type=transcript|length=1273bp
CTAAAATTTAATGAACAAAGTGTAATGTTGACCAGAAATAGATTAACTTC
ACATTCTTTATCTGAAATTGATCAGGGTTCATTTAAAAATGCTGTAATAA
GTGTTGGAAAGGATTTTCAAGCTAAGTTACCTCAATTAGAAAAATTATCT
TCTATAAATTACTATAAATGTTTAAAAAGAAAATATGAAGTTATGTTGTG
GAGTACGAGTTTTGTACGATCACAAGATAAATTACAAGAAACTATTTCTA
ATGCAAGAATTCACTACAAGGCTTATAAAGTGGCACAAAGGAGATTTAGA
TGCAGTTCAAAATGATTTAATGAACTATGTCCCCAAAAAAGATTTTTGGA
ATACCAATGACAGGGCTAAGTTTTTTATGGCGTTAGATTCACATAATAAA
AATTTCAATATTATTAAGGAACTTTTTCCAAATAAAACGATCGGTCAGCT
TGTTTCTGCTTATTATTTATTCAAGAAAAATGTTACAGTTCTTAGAGATA
TGAATGTACTTTTGTTTCCTGGAGCACCACTAGGAAGTTCTGTTTTGCAT
AAAATCAAAAGATATGAAAATGCAATGCCTAAGCACTTTGTTTCAAAGTT
TGGAGCGATTATTAAAAATCTACCACTATCAAATAATTTGAATGCAGATT
TGACGAATCAGACACTGTGGGGTGATCATGCATTGGCTGAGTCAGTTAAA
AGTGTCATGCGTCAAATAGAAATAAACCAAAATCTTCATTGTGGAAATAG
ATTTACGGAACAAACTAGAGATATTTTGTTCGATCAAGGGAAATATGTTT
CCAAAAAAATGCCCAAGCGTCAACATCATTGTATTAATGAACATAAGCAA
TGGTTACGAGACTTTTATCATTCATACAACCATCAAGAGCTTATTCAATA
CCTTCATTCTGGAGATGACAATAAACATGATATTCTTAATCAAGAAATTA
AAGATAGCAGCAACTTAATTAAAACAATAGAATCAGAAATTATGAATAAA
TCAAAACAACTAATAGACTTATTCAAGCATTACAAGCAACAATATCCTCA
GTTCAATGCCAAATGGACTGAGAGCGACATTCAATTGGCACAGTTAGCAA
TTAAAGAAGCCGGGGGAGATATAAAATTTGTTGCGTCGGCGCTGGGTGAT
AAAACTGTAAATATGGTGAAGCATTTTATATCACTCTATTCGCAGCGTTT
ACAAATTGATGAAGGAATATGGCAAAATTTGTTATCTAATTCTGCAAATA
AAGCTTAGTGAATTTTTTTTTGT
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protein sequence of SMED30006146-orf-1

>SMED30006146-orf-1 ID=SMED30006146-orf-1|Name=SMED30006146-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=105bp
LKFNEQSVMLTRNRLTSHSLSEIDQGSFKNAVISVGKDFQAKLPQLEKLS
SINYYKCLKRKYEVMLWSTSFVRSQDKLQETISNARIHYKAYKVAQRRFR
CSSK*
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protein sequence of SMED30006146-orf-2

>SMED30006146-orf-2 ID=SMED30006146-orf-2|Name=SMED30006146-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=358bp
MKLCCGVRVLYDHKINYKKLFLMQEFTTRLIKWHKGDLDAVQNDLMNYVP
KKDFWNTNDRAKFFMALDSHNKNFNIIKELFPNKTIGQLVSAYYLFKKNV
TVLRDMNVLLFPGAPLGSSVLHKIKRYENAMPKHFVSKFGAIIKNLPLSN
NLNADLTNQTLWGDHALAESVKSVMRQIEINQNLHCGNRFTEQTRDILFD
QGKYVSKKMPKRQHHCINEHKQWLRDFYHSYNHQELIQYLHSGDDNKHDI
LNQEIKDSSNLIKTIESEIMNKSKQLIDLFKHYKQQYPQFNAKWTESDIQ
LAQLAIKEAGGDIKFVASALGDKTVNMVKHFISLYSQRLQIDEGIWQNLL
SNSANKA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
Vocabulary: molecular function
TermDefinition
GO:0003677DNA binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availableGENE3DG3DSA:1.20.58.1880coord: 224..348
e-value: 2.6E-11
score: 45.8
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 53..100
e-value: 9.8E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR16089REST COREPRESSOR COREST PROTEIN-RELATEDcoord: 30..340
NoneNo IPR availablePANTHERPTHR16089:SF28GEO13032P1-RELATEDcoord: 30..340
IPR001005SANT/Myb domainSMARTSM00717santcoord: 51..99
e-value: 1.9
score: 15.8
coord: 290..338
e-value: 1.6
score: 16.7
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 44..99