RNA-binding motif protein, X-linked 2

Overview
NameRNA-binding motif protein, X-linked 2
Smed IDSMED30006105
Length (bp)781
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of RNA-binding motif protein, X-linked 2 (SMED30006105) t-SNE clustered cells

Violin plots show distribution of expression levels for RNA-binding motif protein, X-linked 2 (SMED30006105) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of RNA-binding motif protein, X-linked 2 (SMED30006105) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for RNA-binding motif protein, X-linked 2 (SMED30006105) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30006105

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30006105SMESG000050981.1 SmedASXL_010905SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Match: RBMX2 (RNA binding motif protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:24282])

HSP 1 Score: 175.252 bits (443), Expect = 2.963e-53
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ D   SWH+ +K S WIF+GGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   ++ +D+ ++ L +KGCG
Sbjct:    3 LTKVKLINELNEREVQLGVADKV-SWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ-LQEKGCG 136
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Match: RBMX2 (RNA binding motif protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:24282])

HSP 1 Score: 174.866 bits (442), Expect = 1.228e-52
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ D   SWH+ +K S WIF+GGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   ++ +D+ ++ L +KGCG
Sbjct:    4 LTKVKLINELNEREVQLGVADKV-SWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ-LQEKGCG 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Match: RBMX2 (RNA binding motif protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:24282])

HSP 1 Score: 63.5438 bits (153), Expect = 6.971e-13
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQ 196
            +  +K I + NE E++ G+ D   SWH+ +K S WIF+GGL +E +EGDIICVFSQ
Sbjct:    4 LTKVKLINELNEREVQLGVADKV-SWHSEYKDSAWIFLGGLPYELTEGDIICVFSQ 58
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Match: CSTF2 (cleavage stimulation factor subunit 2 [Source:HGNC Symbol;Acc:HGNC:2484])

HSP 1 Score: 66.2402 bits (160), Expect = 7.702e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Match: CSTF2 (cleavage stimulation factor subunit 2 [Source:HGNC Symbol;Acc:HGNC:2484])

HSP 1 Score: 65.855 bits (159), Expect = 1.204e-11
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Match: rbmx-2 (RBMX2 ortholog [Source:UniProtKB/TrEMBL;Acc:Q18318])

HSP 1 Score: 163.696 bits (413), Expect = 6.914e-49
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGII-DSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPE---YDEQIKELQEQ 475
            +  IK   + NE EL  G   D   SWH  +K S WI++GGL +  SEGD+I VFSQYGE++NIN+ RD+ TGKSKGF F+CY+DQRST LAVDNFNGI L  R+++VDHVE+YK+P   +D +D  K+ L+++GC P+    +    E+QEQ
Sbjct:    4 ITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKR-LWEEGCAPKPVMREAAPMEVQEQ 155
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Match: cpf-2 (Cleavage and Polyadenylation Factor [Source:UniProtKB/TrEMBL;Acc:O45577])

HSP 1 Score: 73.559 bits (179), Expect = 6.934e-15
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD 352
            +FVG + ++ SE  I  +FS+ G +++I M  DR TGK KG+ FI + D ++  +A+ N NG +L GR+L+VD
Sbjct:   20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Match: cpf-2 (Cleavage and Polyadenylation Factor [Source:UniProtKB/TrEMBL;Acc:O45577])

HSP 1 Score: 73.559 bits (179), Expect = 6.934e-15
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD 352
            +FVG + ++ SE  I  +FS+ G +++I M  DR TGK KG+ FI + D ++  +A+ N NG +L GR+L+VD
Sbjct:   20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Match: rbm-3.2 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:O45713])

HSP 1 Score: 63.929 bits (154), Expect = 3.264e-13
Identity = 27/77 (35.06%), Postives = 47/77 (61.04%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVED 364
            ++VG   F+ +E D+   FSQ G + N+ +  DR TG+ +GF F+ + ++ +   AVD FNG+   GR L+V+  ++
Sbjct:    6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVNLAQN 82
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Match: rnp-6 (RNP (RRM RNA binding domain) containing [Source:UniProtKB/TrEMBL;Acc:Q9N3S4])

HSP 1 Score: 62.003 bits (149), Expect = 8.745e-11
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV--EDYKLP 376
            I+VG + FE  E  +   F  +G I +INM+ D  TG  K F F+ YE   +  LA ++ NG  LGGR LKV+ +  ++ +LP
Sbjct:  104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLP 186
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Match: CG10466 (gene:FBgn0032822 transcript:FBtr0332178)

HSP 1 Score: 164.466 bits (415), Expect = 6.397e-51
Identity = 77/138 (55.80%), Postives = 98/138 (71.01%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPE 442
            +  +K + K +E EL+HG      SWH+++K S WIFV G  +  +EGD++CVFSQYGE+VNIN+ RD  TGKSKGFCF+CYEDQRST LAVDN NGIK+  R L+VDHV DYK PP   ++ D     LY +GC P+
Sbjct:    4 LTNMKNVLKLSEHELQHG---GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYK-PPKENEKMDEETLRLYMEGCAPK 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Match: CG10466 (gene:FBgn0032822 transcript:FBtr0081291)

HSP 1 Score: 164.466 bits (415), Expect = 6.397e-51
Identity = 77/138 (55.80%), Postives = 98/138 (71.01%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPE 442
            +  +K + K +E EL+HG      SWH+++K S WIFV G  +  +EGD++CVFSQYGE+VNIN+ RD  TGKSKGFCF+CYEDQRST LAVDN NGIK+  R L+VDHV DYK PP   ++ D     LY +GC P+
Sbjct:    4 LTNMKNVLKLSEHELQHG---GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYK-PPKENEKMDEETLRLYMEGCAPK 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Match: CstF64 (gene:FBgn0027841 transcript:FBtr0083660)

HSP 1 Score: 68.9366 bits (167), Expect = 4.553e-13
Identity = 29/75 (38.67%), Postives = 49/75 (65.33%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            +FVG + +E +E  +  +FS+ G ++++ +  DR +GK KGF F  Y+DQ +   A+ N NG ++GGR L+VD+ 
Sbjct:   18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNA 92
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Match: hfp (gene:FBgn0028577 transcript:FBtr0072709)

HSP 1 Score: 67.3958 bits (163), Expect = 1.833e-12
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2 
Query:  128 CWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
            C ++VG + FE  E  I   F+ +G I +INM+ D  T K KGF F+ YE      LA++  NG  +GGR +KV
Sbjct:  130 CRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 203
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Match: hfp (gene:FBgn0028577 transcript:FBtr0300416)

HSP 1 Score: 67.0106 bits (162), Expect = 2.131e-12
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2 
Query:  128 CWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
            C ++VG + FE  E  I   F+ +G I +INM+ D  T K KGF F+ YE      LA++  NG  +GGR +KV
Sbjct:   38 CRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Match: rbmx2 (RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88])

HSP 1 Score: 163.31 bits (412), Expect = 4.260e-47
Identity = 79/137 (57.66%), Postives = 104/137 (75.91%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGP 439
            +  +K I + NE E + GI ++  SWH+++K S W+F+GG  +E +EGDIICVFSQYGEI NIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P    D +DI K+ L ++GC P
Sbjct:    4 LTKVKLINELNEREAQLGIKETV-SWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKDTDDIDDITKQ-LREEGCAP 138
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Match: rbmx2 (RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88])

HSP 1 Score: 162.54 bits (410), Expect = 5.909e-47
Identity = 79/134 (58.96%), Postives = 103/134 (76.87%), Query Frame = 2 
Query:   38 IKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGP 439
            +K I + NE E + GI ++  SWH+++K S W+F+GG  +E +EGDIICVFSQYGEI NIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P    D +DI K+ L ++GC P
Sbjct:    1 VKLINELNEREAQLGIKETV-SWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKDTDDIDDITKQ-LREEGCAP 132
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Match: cirbpa (cold inducible RNA binding protein a [Source:ZFIN;Acc:ZDB-GENE-050417-329])

HSP 1 Score: 65.4698 bits (158), Expect = 1.205e-12
Identity = 28/75 (37.33%), Postives = 48/75 (64.00%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            +F+GGL F+ +E  +   FS+YG I N+++AR+R T +S+GF F+ +E+      A++  NG  + GR ++VD  
Sbjct:    7 LFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSVDGRTIRVDEA 81
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Match: cstf2 (cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2])

HSP 1 Score: 65.0846 bits (157), Expect = 1.092e-11
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 104
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Match: cstf2 (cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2])

HSP 1 Score: 65.0846 bits (157), Expect = 1.168e-11
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 104
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Match: rbmx2 (RNA binding motif protein X-linked 2 [Source:NCBI gene;Acc:549695])

HSP 1 Score: 169.474 bits (428), Expect = 3.596e-51
Identity = 78/154 (50.65%), Postives = 108/154 (70.13%), Query Frame = 2 
Query:   23 I*MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDE 484
            I +  +K I + N  E   G+ DS  SWH  +K S W+F+GGL +E SEGDIICVFSQYGE+VNIN+ RD+ +G+S+GFCF+C+EDQRST LAVDN NGIK+ GR ++VDHV +Y+ PP   ++ D + + L +KGCG      +   Q++ +E
Sbjct:    1 IPLTKVKLINELNAREASLGVKDSV-SWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYR-PPKDAEDIDEITQSLREKGCGARTPSPVSSSQDEDEE 152
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Match: rbmx2 (RNA binding motif protein X-linked 2 [Source:NCBI gene;Acc:549695])

HSP 1 Score: 169.859 bits (429), Expect = 6.524e-51
Identity = 77/152 (50.66%), Postives = 107/152 (70.39%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDE 484
            +  +K I + N  E   G+ DS  SWH  +K S W+F+GGL +E SEGDIICVFSQYGE+VNIN+ RD+ +G+S+GFCF+C+EDQRST LAVDN NGIK+ GR ++VDHV +Y+ PP   ++ D + + L +KGCG      +   Q++ +E
Sbjct:   26 LTKVKLINELNAREASLGVKDSV-SWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYR-PPKDAEDIDEITQSLREKGCGARTPSPVSSSQDEDEE 175
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Match: rbmx2 (RNA binding motif protein X-linked 2 [Source:NCBI gene;Acc:549695])

HSP 1 Score: 168.318 bits (425), Expect = 1.831e-50
Identity = 77/152 (50.66%), Postives = 107/152 (70.39%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDE 484
            +  +K I + N  E   G+ DS  SWH  +K S W+F+GGL +E SEGDIICVFSQYGE+VNIN+ RD+ +G+S+GFCF+C+EDQRST LAVDN NGIK+ GR ++VDHV +Y+ PP   ++ D + + L +KGCG      +   Q++ +E
Sbjct:   23 LTKVKLINELNAREASLGVKDSV-SWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYR-PPKDAEDIDEITQSLREKGCGARTPSPVSSSQDEDEE 172
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Match: mcm3ap (minichromosome maintenance complex component 3 associated protein [Source:Xenbase;Acc:XB-GENE-981006])

HSP 1 Score: 69.3218 bits (168), Expect = 5.502e-13
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 2 
Query:  122 GSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
             SC I VG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   13 ASCHIAVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 95
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Match: RBM23 (RNA binding motif protein 23 [Source:NCBI gene;Acc:100144745])

HSP 1 Score: 69.3218 bits (168), Expect = 5.946e-13
Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 2 
Query:  122 GSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDY 367
            G   ++VG L F  +E  +  +F  +G+I NI + ++  TG+SKGF FI + D      A++  NG +L GR +KV HV D+
Sbjct:  246 GPMRLYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGRPMKVGHVTDH 327
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Match: Rbmx2 (RNA binding motif protein, X-linked 2 [Source:MGI Symbol;Acc:MGI:1919414])

HSP 1 Score: 178.333 bits (451), Expect = 4.830e-54
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ +   SWH+ +K S WIFVGGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   +D +D+ ++ L +KGCG
Sbjct:    4 LTKVKLINELNEREVQLGVAEKV-SWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRE-LQEKGCG 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Match: Rbmx (RNA binding motif protein, X chromosome [Source:MGI Symbol;Acc:MGI:1343044])

HSP 1 Score: 63.1586 bits (152), Expect = 1.775e-12
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            +F+GGL  E +E  +  VF +YG IV + + +DR T KS+GF F+ +E       A  + NG  L G+ +KV+  
Sbjct:   10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Match: Cstf2 (cleavage stimulation factor, 3' pre-RNA subunit 2 [Source:MGI Symbol;Acc:MGI:1343054])

HSP 1 Score: 66.2402 bits (160), Expect = 6.596e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Match: Cstf2 (cleavage stimulation factor, 3' pre-RNA subunit 2 [Source:MGI Symbol;Acc:MGI:1343054])

HSP 1 Score: 65.855 bits (159), Expect = 6.979e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Match: Cstf2 (cleavage stimulation factor, 3' pre-RNA subunit 2 [Source:MGI Symbol;Acc:MGI:1343054])

HSP 1 Score: 65.855 bits (159), Expect = 7.503e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 96
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Match: sp|Q8R0F5|RBMX2_MOUSE (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.378e-53
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ +   SWH+ +K S WIFVGGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   +D +D+ ++ L +KGCG
Sbjct:    4 LTKVKLINELNEREVQLGVAEKV-SWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRE-LQEKGCG 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Match: sp|B0BN49|RBMX2_RAT (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.274e-52
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ +   SWH+ +K S WIF+GGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   +D +D+ ++ L +KGCG
Sbjct:    4 LTKVKLINELNEREVQLGVAEKV-SWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQESEDVDDVTRE-LQEKGCG 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Match: sp|Q9Y388|RBMX2_HUMAN (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.898e-52
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCG 436
            +  +K I + NE E++ G+ D   SWH+ +K S WIF+GGL +E +EGDIICVFSQYGEIVNIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR ++VDHV +Y+ P   ++ +D+ ++ L +KGCG
Sbjct:    4 LTKVKLINELNEREVQLGVADKV-SWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ-LQEKGCG 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Match: sp|O94290|IST3_SCHPO (U2 snRNP component ist3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf29 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.678e-37
Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP 376
            MN+I+ I + NE EL         SWH  +  S +I++G L F+ +E DI+CVFS++GE V+IN+ RD+ TGKSKGF F+ YEDQRST LAVDN   +KL  R+++VDHV  YK+P
Sbjct:    1 MNSIRQIERLNEQELDKPF---SSSWHQDYSDSAYIYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNMTNVKLLDRLVRVDHVASYKVP 113
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Match: sp|P40565|IST3_YEAST (U2 snRNP component IST3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IST3 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.818e-35
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            MN I+ I   N+ EL+ GI+    SWHN +K + +I++G L  E +EGDI+ VFS+YG  V++ ++RD  TG+S+GF ++ YEDQRST LAVDN NG K+GGR LK+DH 
Sbjct:    1 MNKIQQI---NDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHT 107
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Match: T1INA9 (RRM domain-containing protein OS=Strigamia maritima OX=126957 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 6.151e-56
Identity = 91/171 (53.22%), Postives = 124/171 (72.51%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIER 541
            ++ ++ I + N+ E+R GI +   SWHN +K S WIFVGGL +E++EGD++CVFSQYGE+VNIN+ RD+ TGKSKG+CF+CYEDQRST LAVDN NGIKL  RV++VDHV +YK+P  F D  D L K L  +GCGP        +++  DEI+I+ D   ER  ++K+E+
Sbjct:    4 LSNVRLINELNKKEVRLGI-NEKASWHNEYKDSAWIFVGGLSYEFTEGDVVCVFSQYGEVVNINLIRDKATGKSKGYCFLCYEDQRSTVLAVDNLNGIKLSNRVIRVDHVANYKVPKDFAD-TDPLVKALRDEGCGPSV------VKKAIDEIEIVED---EREPVLKVEK 163
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Match: A0A183MVG7 (RRM domain-containing protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS20042 PE=4 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.966e-54
Identity = 95/196 (48.47%), Postives = 124/196 (63.27%), Query Frame = 2 
Query:   29 MNTI---KTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP-------------PLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIE----REKRYN 556
            MN I   K     NE EL  G   +  SWH  +K S WI+VGGL ++ +EGD+ICVFSQYGEIVNIN+ RD+ TG SKGF F+CYEDQRST LA DN NGIKLGGR+++VDHVE Y++P             P +K   D + +F+ + GCGPE  +Q+K++Q++ D        E E+  L  I+    REKR+N
Sbjct:    1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPKDGVLDVGHTDKKPEYKRPTDSVSEFVKEHGCGPEVMKQLKKIQQEQD--------EAEKQRLKAIQKRNGREKRHN 188
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Match: A0A094ZGH4 (RNA-binding motif protein, X-linked 2 OS=Schistosoma haematobium OX=6185 GN=MS3_00075 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.151e-54
Identity = 95/194 (48.97%), Postives = 123/194 (63.40%), Query Frame = 2 
Query:   29 MNTI---KTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP-------------PLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIE--REKRYN 556
            MN I   K     NE EL  G   +  SWH  +K S WI+VGGL ++ +EGD+ICVFSQYGEIVNIN+ RD+ TG SKGF F+CYEDQRST LA DN NGIKLGGR+++VDHVE Y++P             P  K   D + +F+ + GCGPE  +Q+K++Q++ DE       E  R E ++    REKR+N
Sbjct:    1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPKDGVLDVGHMDKKPEHKRPTDSVSEFVKEHGCGPEVMKQLKKIQQEQDEA------EKRRLEAIQKRNGREKRHN 188
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Match: A0A183KB55 (RRM domain-containing protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS12243 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.151e-54
Identity = 95/194 (48.97%), Postives = 123/194 (63.40%), Query Frame = 2 
Query:   29 MNTI---KTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP-------------PLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIE--REKRYN 556
            MN I   K     NE EL  G   +  SWH  +K S WI+VGGL ++ +EGD+ICVFSQYGEIVNIN+ RD+ TG SKGF F+CYEDQRST LA DN NGIKLGGR+++VDHVE Y++P             P  K   D + +F+ + GCGPE  +Q+K++Q++ DE       E  R E ++    REKR+N
Sbjct:    1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPKDGVLDVGHMDKKPEHKRPTDSVSEFVKEHGCGPEVMKQLKKIQQEQDEA------EKRRLEAIQKRNGREKRHN 188
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Match: A0A430QKA0 (RNA-binding motif protein, X-linked 2 OS=Schistosoma bovis OX=6184 GN=DC041_0012523 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.321e-54
Identity = 95/194 (48.97%), Postives = 123/194 (63.40%), Query Frame = 2 
Query:   29 MNTI---KTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP-------------PLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIE--REKRYN 556
            MN I   K     NE EL  G   +  SWH  +K S WI+VGGL ++ +EGD+ICVFSQYGEIVNIN+ RD+ TG SKGF F+CYEDQRST LA DN NGIKLGGR+++VDHVE Y++P             P  K   D + +F+ + GCGPE  +Q+K++Q++ DE       E  R E ++    REKR+N
Sbjct:    1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPKDGVLDVGHMDKKPEHKRPTDSVSEFVKEHGCGPEVMKQLKKIQQEQDEA------EKRRLEAIQKRNGREKRHN 188
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Match: ENSAMXT00000048197.1 (RNA binding motif protein X-linked 2 [Source:NCBI gene;Acc:103031183])

HSP 1 Score: 176.407 bits (446), Expect = 4.989e-53
Identity = 78/137 (56.93%), Postives = 105/137 (76.64%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGP 439
            +  +K I + NE E + G+ D+  SWH+++K S WIF+GG  +E +EGD+IC+FSQYGEI NIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR L+VDHV +Y+ P   +D +D+ K+ L ++GC P
Sbjct:    3 LTKVKLINELNEREAKLGVKDAV-SWHSVYKDSAWIFIGGFPYELTEGDVICIFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTLRVDHVANYRPPKDSEDIDDVTKR-LREEGCAP 137
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Match: ENSAMXT00000007249.2 (RNA binding motif protein X-linked 2 [Source:NCBI gene;Acc:103031183])

HSP 1 Score: 176.022 bits (445), Expect = 1.188e-52
Identity = 78/138 (56.52%), Postives = 106/138 (76.81%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPE 442
            +  +K I + NE E + G+ D+  SWH+++K S WIF+GG  +E +EGD+IC+FSQYGEI NIN+ RD+ TGKSKGFCF+CYEDQRST LAVDNFNGIK+ GR L+VDHV +Y+ P   +D +D+ K+ L ++GC P+
Sbjct:    4 LTKVKLINELNEREAKLGVKDAV-SWHSVYKDSAWIFIGGFPYELTEGDVICIFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTLRVDHVANYRPPKDSEDIDDVTKR-LREEGCAPK 139
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Match: cirbpa (cold inducible RNA binding protein a [Source:ZFIN;Acc:ZDB-GENE-050417-329])

HSP 1 Score: 65.855 bits (159), Expect = 4.608e-13
Identity = 28/75 (37.33%), Postives = 48/75 (64.00%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            +F+GGL F+ +E  +   FS+YG I N+++AR+R T +S+GF F+ +E+      A++  NG  + GR ++VD  
Sbjct:    7 LFIGGLSFDTTEQSLEEAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSVDGRAIRVDEA 81
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:103042269])

HSP 1 Score: 65.4698 bits (158), Expect = 8.738e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   25 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 103
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:103042269])

HSP 1 Score: 65.4698 bits (158), Expect = 9.149e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   25 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 103
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923])

HSP 1 Score: 70.4774 bits (171), Expect = 3.875e-14
Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 2 
Query:   38 IKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +  I +A++ E       +  +   +  G   ++VG L F  +E  ++ +F  +G+I NI +  D  TG+SKGF FI +        A++  NG +L GR +KV++V D+ 
Sbjct:  242 VPIIVQASQAEKNRAAAAAAANLQKLASGPMRLYVGSLHFNITEAMLMGIFEPFGKIDNIQLMMDPETGRSKGFGFITFSSADCAKKALEQLNGFELAGRPMKVNYVSDHS 352
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010908.1 (pep scaffold:Pmarinus_7.0:GL483688:3845:10066:1 gene:ENSPMAG00000009884.1 transcript:ENSPMAT00000010908.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 63.929 bits (154), Expect = 6.232e-13
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 2 
Query:  128 CWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
            C ++VG + +E  E  I   F+ +G I +I+M+ D  T K KGF F+ Y+   +  LA++  NGI LGGR +KV
Sbjct:   19 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSFDPVTMKHKGFAFVEYDLPEAAQLAMEQMNGITLGGRSIKV 92
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000820.1 (pep scaffold:Pmarinus_7.0:GL483865:282:6617:-1 gene:ENSPMAG00000000738.1 transcript:ENSPMAT00000000820.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 58.5362 bits (140), Expect = 6.076e-11
Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP-----PLFKDENDILKKF 415
            ++VGGL  E  E  +   F  +G+IV+I M  D  T K +GF F+ +E    +  A+DN N  +L GR ++V+  +  +L      P++ D+N  LK+F
Sbjct:    9 LYVGGLAEEVDEKVLHAAFIPFGDIVDIQMPLDYETEKHRGFGFVEFEAAEDSAAAIDNMNESELFGRTIRVNLAKPMRLKEGSMRPVWSDDN-WLKRF 106
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 59.6918 bits (143), Expect = 8.277e-11
Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 2 
Query:  125 SCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD 352
            SC + V GL     E D+  VFS+YG + ++N+  D+ +G+S+GF F+ +++      A +  NG++L GR ++VD
Sbjct:  111 SCCLGVFGLSLHTGEKDLKEVFSRYGPVQSVNVVYDQQSGRSRGFAFVYFDNSEDAKEAKERANGMELDGRYIRVD 186
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923])

HSP 1 Score: 60.077 bits (144), Expect = 1.105e-10
Identity = 27/81 (33.33%), Postives = 45/81 (55.56%), Query Frame = 2 
Query:  122 GSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVED 364
            G   ++VG L F  +E  +  +F  +G+I N  +  D  TG+S+G+ F+ + D      A++  NG +L GR +KV HV +
Sbjct:  257 GPMRLYVGSLHFNITEDMLKGIFEPFGKIENCQLMMDSDTGRSRGYGFVTFADAECARKALEQLNGFELAGRPMKVGHVTE 337
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Match: IST3 (Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids [Source:SGD;Acc:S000001444])

HSP 1 Score: 125.176 bits (313), Expect = 1.270e-36
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHV 358
            MN I+ I   N+ EL+ GI+    SWHN +K + +I++G L  E +EGDI+ VFS+YG  V++ ++RD  TG+S+GF ++ YEDQRST LAVDN NG K+GGR LK+DH 
Sbjct:    1 MNKIQQI---NDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHT 107
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Match: RNA15 (Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability [Source:SGD;Acc:S000003012])

HSP 1 Score: 60.8474 bits (146), Expect = 2.117e-11
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLK 346
            +++G + ++ +E  I+ + S  G ++N+ M  D  TG+SKG+ FI + D  S+  AV N NG +LG R LK
Sbjct:   20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLK 90
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483])

HSP 1 Score: 55.4546 bits (132), Expect = 2.428e-9
Identity = 42/141 (29.79%), Postives = 74/141 (52.48%), Query Frame = 2 
Query:  101 SWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKL--P--PLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEV 511
            S  ++ K SC +F+GGL ++ +E ++   F +YG + ++ + +D  TG+S+GF F+ +E   S    VD          V+K  H+ D K+  P   + +DE D   K ++  G GP  D + KE +E   +   I+D ++
Sbjct:  150 SKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSS----VD---------EVVKTQHILDGKVIDPKRAIPRDEQDKTGK-IFVGGIGP--DVRPKEFEEFFSQWGTIIDAQL 274
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Match: RIE1 (Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts with Rbg1p in a two-hybrid assay; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003482])

HSP 1 Score: 51.2174 bits (121), Expect = 6.984e-8
Identity = 26/77 (33.77%), Postives = 43/77 (55.84%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD-HVE 361
            IFVGG+    S G++  +FS+YG I+++ +  D+  G+  G+ FI Y      +L +   NG  + G  L ++ HVE
Sbjct:  197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVE 273
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Match: NOP13 (Nucleolar protein found in preribosomal complexes; contains an RNA recognition motif (RRM); relative distribution to the nucleolus increases upon DNA replication stress [Source:SGD;Acc:S000005119])

HSP 1 Score: 50.447 bits (119), Expect = 9.609e-8
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 2 
Query:  125 SCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVED 364
            S  +FVG L F+ ++  +   F   G+IV I MA    +GK KGF FI ++++  +T A+ + +  K+ GR L++++ ED
Sbjct:  238 SRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNALKDKSCRKIAGRPLRMEYGED 317
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Match: EDO28437 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T6G8])

HSP 1 Score: 58.151 bits (139), Expect = 8.638e-12
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 2 
Query:   38 IKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQ 196
            IK I K N+  L  G+ D   SWH  +K S ++F+GGL ++ +EGDI+CVFSQ
Sbjct:    1 IKNIQKLNDRMLEMGVTDDA-SWHKQYKDSAYVFIGGLPYDLTEGDILCVFSQ 52
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Match: EDO46306 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQK4])

HSP 1 Score: 60.4622 bits (145), Expect = 1.385e-10
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 2 
Query:  128 CWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
            C ++VG + FE  E  I   F  +G I  I+++ D    K KGF F+ Y+   +  LA++  NG+ LGGR +KV
Sbjct:   64 CRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKV 137

HSP 2 Score: 56.225 bits (134), Expect = 3.356e-9
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 2 
Query:  128 CWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
              I++  +  +  E DI  VF  +G++V+ +++++  TGK KG+ FI YE+Q+S   A+ + N   LGG+ L+V
Sbjct:  161 ARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRV 234
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Match: EDO29715 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2V2])

HSP 1 Score: 55.4546 bits (132), Expect = 1.904e-10
Identity = 27/76 (35.53%), Postives = 42/76 (55.26%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVE 361
            IFVG L F   E D+   F +YG + ++ +  D++TG+SKGF F+   +      A+D  NG  + GR + V+  E
Sbjct:    3 IFVGSLPFSIEEADLRGFFEEYGAVDSVKIISDKFTGRSKGFGFVEMPNDAEAQKAIDELNGGTVEGRTIVVNKSE 78
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Match: EDO44802 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUS7])

HSP 1 Score: 57.7658 bits (138), Expect = 2.551e-10
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 2 
Query:   98 GSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDH 355
            G+  N     C + V GL    +E D+  VF +YG +  I +  D  TG+S+GF F+ YED +   +A +   GI+L GR ++VD+
Sbjct:   86 GNRDNPSPSRC-LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQTGRSRGFGFVYYEDTKDAEVAKERTTGIELDGRRIRVDY 170
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Match: EDO42151 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2H6])

HSP 1 Score: 57.3806 bits (137), Expect = 3.103e-10
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKV 349
            ++VGGLK E +E +I   F QYGEI  +N+ R    GKSKGFCF+ + D  S    + NF    L G+ ++V
Sbjct:   12 LYVGGLKEETTEENIREHFQQYGEITELNLVRTP-EGKSKGFCFVSFSDSDSVDNILFNFESHSLDGKKIEV 82
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Match: cirbpa (cold inducible RNA binding protein [Source:NCBI gene;Acc:101165004])

HSP 1 Score: 65.855 bits (159), Expect = 7.902e-13
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD 352
            +F+GGL FE +E  +   F +YG I  +++ RD+ TG+S+GF F+ Y++      A+D  NG  L GR ++VD
Sbjct:    7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAMNGKTLDGRAIRVD 79
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Match: cirbpa (cold inducible RNA binding protein [Source:NCBI gene;Acc:101165004])

HSP 1 Score: 65.4698 bits (158), Expect = 8.317e-13
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVD 352
            +F+GGL FE +E  +   F +YG I  +++ RD+ TG+S+GF F+ Y++      A+D  NG  L GR ++VD
Sbjct:    6 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAMNGKTLDGRAIRVD 78
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Match: ENSORLT00000012445.2 (RNA-binding protein 39 [Source:NCBI gene;Acc:101155103])

HSP 1 Score: 66.6254 bits (161), Expect = 3.519e-12
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 2 
Query:  116 FKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLP 376
              G   ++VG L F  +E  +  +F  +G I NI +  D  TG+SKG+ FI + D      A++  NG +L GR +KV HV +   P
Sbjct:  222 LTGPMRLYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDP 308
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Match: ENSORLT00000016525.2 (pep primary_assembly:ASM223467v1:14:23471088:23471397:1 gene:ENSORLG00000013183.2 transcript:ENSORLT00000016525.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 61.2326 bits (147), Expect = 3.674e-12
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQY 199
            +  +K I + NE E   G+ +   SWH+ ++ S WIFVGG  +E +EGD++CVFSQY
Sbjct:    4 LTKVKLINELNEREADLGV-NEKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQY 59
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:101163985])

HSP 1 Score: 65.4698 bits (158), Expect = 8.278e-12
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 2 
Query:  134 IFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYK 370
            +FVG + +E +E  +  +FS+ G +V+  +  DR TGK KG+ F  Y+DQ +   A+ N NG +  GR L+VD+    K
Sbjct:   31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 109
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Match: SMESG000050981.1 (SMESG000050981.1)

HSP 1 Score: 385.956 bits (990), Expect = 3.405e-137
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 2 
Query:   29 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIEREKRYNCVDADKYEV 583
            MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIEREKRYNCVDADKYEV
Sbjct:    1 MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQSDEIKIILDQEVERYELMKIEREKRYNCVDADKYEV 185
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.970e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 2 
Query:  119 KGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDH 355
            K S  I V GL  +  E D+  VF +YGEI ++ +  D YTG+S+GF FI YE+  S   A D+ +GI++ GRV+++D+
Sbjct:   84 KPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDY 162
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.356e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 2 
Query:  119 KGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDH 355
            K S  I V GL  +  E D+  VF +YGEI ++ +  D YTG+S+GF FI YE+  S   A D+ +GI++ GRV+++D+
Sbjct:   85 KPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDY 163
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Match: SMESG000031639.1 (SMESG000031639.1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.742e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 2 
Query:  119 KGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDH 355
            K S  I V GL  +  E D+  VF +YGEI ++ +  D YTG+S+GF FI YE+  S   A D+ +GI++ GRV+++D+
Sbjct:   84 KPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDY 162
[Close]
BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Match: SMESG000031639.1 (SMESG000031639.1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.003e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 2 
Query:  119 KGSCWIFVGGLKFEYSEGDIICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKLGGRVLKVDH 355
            K S  I V GL  +  E D+  VF +YGEI ++ +  D YTG+S+GF FI YE+  S   A D+ +GI++ GRV+++D+
Sbjct:   85 KPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDY 163
The following BLAST results are available for this feature:
BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RBMX22.963e-5358.82RNA binding motif protein X-linked 2 [Source:HGNC ... [more]
RBMX21.228e-5258.82RNA binding motif protein X-linked 2 [Source:HGNC ... [more]
RBMX26.971e-1351.79RNA binding motif protein X-linked 2 [Source:HGNC ... [more]
CSTF27.702e-1237.97cleavage stimulation factor subunit 2 [Source:HGNC... [more]
CSTF21.204e-1137.97cleavage stimulation factor subunit 2 [Source:HGNC... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbmx-26.914e-4952.29RBMX2 ortholog [Source:UniProtKB/TrEMBL;Acc:Q1831... [more]
cpf-26.934e-1542.47Cleavage and Polyadenylation Factor [Source:UniPr... [more]
cpf-26.934e-1542.47Cleavage and Polyadenylation Factor [Source:UniPr... [more]
rbm-3.23.264e-1335.06RNA Binding Motif protein homolog [Source:UniProt... [more]
rnp-68.745e-1139.76RNP (RRM RNA binding domain) containing [Source:U... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG104666.397e-5155.80gene:FBgn0032822 transcript:FBtr0332178[more]
CG104666.397e-5155.80gene:FBgn0032822 transcript:FBtr0081291[more]
CstF644.553e-1338.67gene:FBgn0027841 transcript:FBtr0083660[more]
hfp1.833e-1241.89gene:FBgn0028577 transcript:FBtr0072709[more]
hfp2.131e-1241.89gene:FBgn0028577 transcript:FBtr0300416[more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbmx24.260e-4757.66RNA binding motif protein X-linked 2 [Source:ZFIN;... [more]
rbmx25.909e-4758.96RNA binding motif protein X-linked 2 [Source:ZFIN;... [more]
cirbpa1.205e-1237.33cold inducible RNA binding protein a [Source:ZFIN;... [more]
cstf21.092e-1137.97cleavage stimulation factor, 3' pre-RNA, subunit 2... [more]
cstf21.168e-1137.97cleavage stimulation factor, 3' pre-RNA, subunit 2... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbmx23.596e-5150.65RNA binding motif protein X-linked 2 [Source:NCBI ... [more]
rbmx26.524e-5150.66RNA binding motif protein X-linked 2 [Source:NCBI ... [more]
rbmx21.831e-5050.66RNA binding motif protein X-linked 2 [Source:NCBI ... [more]
mcm3ap5.502e-1338.55minichromosome maintenance complex component 3 ass... [more]
RBM235.946e-1337.80RNA binding motif protein 23 [Source:NCBI gene;Acc... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rbmx24.830e-5459.56RNA binding motif protein, X-linked 2 [Source:MGI ... [more]
Rbmx1.775e-1237.33RNA binding motif protein, X chromosome [Source:MG... [more]
Cstf26.596e-1237.97cleavage stimulation factor, 3' pre-RNA subunit 2 ... [more]
Cstf26.979e-1237.97cleavage stimulation factor, 3' pre-RNA subunit 2 ... [more]
Cstf27.503e-1237.97cleavage stimulation factor, 3' pre-RNA subunit 2 ... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8R0F5|RBMX2_MOUSE3.378e-5359.56RNA-binding motif protein, X-linked 2 OS=Mus muscu... [more]
sp|B0BN49|RBMX2_RAT5.274e-5258.82RNA-binding motif protein, X-linked 2 OS=Rattus no... [more]
sp|Q9Y388|RBMX2_HUMAN5.898e-5258.82RNA-binding motif protein, X-linked 2 OS=Homo sapi... [more]
sp|O94290|IST3_SCHPO2.678e-3751.72U2 snRNP component ist3 OS=Schizosaccharomyces pom... [more]
sp|P40565|IST3_YEAST8.818e-3551.82U2 snRNP component IST3 OS=Saccharomyces cerevisia... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
T1INA96.151e-5653.22RRM domain-containing protein OS=Strigamia maritim... [more]
A0A183MVG72.966e-5448.47RRM domain-containing protein OS=Schistosoma margr... [more]
A0A094ZGH45.151e-5448.97RNA-binding motif protein, X-linked 2 OS=Schistoso... [more]
A0A183KB555.151e-5448.97RRM domain-containing protein OS=Schistosoma curas... [more]
A0A430QKA05.321e-5448.97RNA-binding motif protein, X-linked 2 OS=Schistoso... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000048197.14.989e-5356.93RNA binding motif protein X-linked 2 [Source:NCBI ... [more]
ENSAMXT00000007249.21.188e-5256.52RNA binding motif protein X-linked 2 [Source:NCBI ... [more]
cirbpa4.608e-1337.33cold inducible RNA binding protein a [Source:ZFIN;... [more]
cstf28.738e-1237.97cleavage stimulation factor subunit 2 [Source:NCBI... [more]
cstf29.149e-1237.97cleavage stimulation factor subunit 2 [Source:NCBI... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RBM393.875e-1429.73RNA binding motif protein 39 [Source:HGNC Symbol;A... [more]
ENSPMAT00000010908.16.232e-1340.54pep scaffold:Pmarinus_7.0:GL483688:3845:10066:1 ge... [more]
ENSPMAT00000000820.16.076e-1134.34pep scaffold:Pmarinus_7.0:GL483865:282:6617:-1 gen... [more]
tra2a8.277e-1135.53transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
RBM391.105e-1033.33RNA binding motif protein 39 [Source:HGNC Symbol;A... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
IST31.270e-3651.82Component of the U2 snRNP; required for the first ... [more]
RNA152.117e-1138.03Component of the cleavage and polyadenylation fact... [more]
HRP12.428e-929.79Subunit of cleavage factor I; cleavage factor I is... [more]
RIE16.984e-833.77Putative RNA binding protein; localizes to stress ... [more]
NOP139.609e-835.00Nucleolar protein found in preribosomal complexes;... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO284378.638e-1249.06Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO463061.385e-1037.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO297151.904e-1035.53Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO448022.551e-1036.05Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO421513.103e-1043.06Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
cirbpa7.902e-1339.73cold inducible RNA binding protein [Source:NCBI ge... [more]
cirbpa8.317e-1339.73cold inducible RNA binding protein [Source:NCBI ge... [more]
ENSORLT00000012445.23.519e-1235.63RNA-binding protein 39 [Source:NCBI gene;Acc:10115... [more]
ENSORLT00000016525.23.674e-1245.61pep primary_assembly:ASM223467v1:14:23471088:23471... [more]
cstf28.278e-1237.97cleavage stimulation factor subunit 2 [Source:NCBI... [more]
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BLAST of RNA-binding motif protein, X-linked 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000050981.13.405e-137100.00SMESG000050981.1[more]
SMESG000031644.15.970e-1343.04SMESG000031644.1[more]
SMESG000031644.16.356e-1343.04SMESG000031644.1[more]
SMESG000031639.17.742e-1343.04SMESG000031639.1[more]
SMESG000031639.18.003e-1343.04SMESG000031639.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30006105 ID=SMED30006105|Name=RNA-binding motif protein, X-linked 2|organism=Schmidtea mediterranea sexual|type=transcript|length=781bp
TTTTTTTAAAAATATTTTTCAAATCTAGATGAATACAATAAAAACTATTA
CGAAAGCTAATGAAACAGAATTACGACATGGTATTATAGATTCCGGAGGT
TCTTGGCACAATATTTTTAAAGGGAGTTGTTGGATATTTGTCGGTGGACT
AAAATTTGAATATTCTGAAGGTGATATAATTTGTGTATTTTCCCAATACG
GTGAAATTGTAAATATTAATATGGCTCGTGATCGATATACAGGAAAATCA
AAAGGATTTTGTTTTATATGTTACGAGGATCAAAGAAGTACTACATTAGC
TGTAGATAATTTTAATGGAATAAAACTTGGTGGCAGAGTTCTAAAAGTTG
ATCACGTAGAGGATTATAAATTACCACCTTTATTTAAAGACGAAAATGAT
ATACTCAAAAAATTTTTATACCAAAAAGGATGTGGGCCAGAGTATGATGA
ACAAATAAAAGAACTACAAGAACAATCAGATGAAATAAAAATAATACTAG
ATCAAGAAGTTGAAAGGTATGAATTAATGAAAATTGAACGAGAGAAGAGA
TATAACTGTGTAGATGCTGATAAATATGAAGTCAAACGATCTAAACGTAG
TAGAGAAAGTGATCGTGATGAAAGGCACAGAGAAAGAAGGAAATCCAGAA
GTCGTTCCAGAGATAGATATAGCAAGTCTAAACGATCAAGAAGTACTCAC
AAACGTAAAAAACGATCCTCATAAATTTGTCAATAAAACAGTTGCTTTAC
TACTTGTTATGTTTTGTACTTATTTAAAATG
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protein sequence of SMED30006105-orf-1

>SMED30006105-orf-1 ID=SMED30006105-orf-1|Name=SMED30006105-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=232bp
MNTIKTITKANETELRHGIIDSGGSWHNIFKGSCWIFVGGLKFEYSEGDI
ICVFSQYGEIVNINMARDRYTGKSKGFCFICYEDQRSTTLAVDNFNGIKL
GGRVLKVDHVEDYKLPPLFKDENDILKKFLYQKGCGPEYDEQIKELQEQS
DEIKIILDQEVERYELMKIEREKRYNCVDADKYEVKRSKRSRESDRDERH
RERRKSRSRSRDRYSKSKRSRSTHKRKKRSS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003723RNA binding
Vocabulary: biological process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0006406mRNA export from nucleus
Vocabulary: cellular component
TermDefinition
GO:0005686U2 snRNP
GO:0070274RES complex
GO:0071011precatalytic spliceosome
GO:0071013catalytic step 2 spliceosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..200
NoneNo IPR availablePANTHERPTHR45880FAMILY NOT NAMEDcoord: 1..226
NoneNo IPR availablePANTHERPTHR45880:SF1RNA-BINDING MOTIF PROTEIN, X-LINKED 2coord: 1..226
NoneNo IPR availableCDDcd12411RRM_ist3_likecoord: 25..113
e-value: 1.66681E-58
score: 177.831
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 35..108
e-value: 5.8E-22
score: 89.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 36..106
e-value: 8.6E-19
score: 67.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 34..112
score: 17.063
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 27..128
e-value: 1.5E-23
score: 85.2
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 26..112