60s ribosomal protein l3

Overview
Name60s ribosomal protein l3
Smed IDSMED30005998
Length (bp)818
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60s ribosomal protein l3 (SMED30005998) t-SNE clustered cells

Violin plots show distribution of expression levels for 60s ribosomal protein l3 (SMED30005998) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60s ribosomal protein l3 (SMED30005998) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60s ribosomal protein l3 (SMED30005998) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30005998

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30005998SMESG000081260.1 SmedASXL_011002SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30005998SMESG000081260.1 SmedASXL_011002SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
protonephridiaSMED30005998SMESG000081260.1 dd_Smed_v4_12559_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30005998SMESG000081260.1 dd_Smed_v4_12559_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30005998SMESG000081260.1 dd_Smed_v4_12559_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30005998SMESG000081260.1 dd_Smed_v4_12559_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Match: RPL3 (ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332])

HSP 1 Score: 341.273 bits (874), Expect = 3.527e-117
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  101 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 348
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Match: RPL3 (ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332])

HSP 1 Score: 341.273 bits (874), Expect = 2.277e-116
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 328.946 bits (842), Expect = 1.538e-111
Identity = 169/259 (65.25%), Postives = 205/259 (79.15%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIA 780
            MKKYCKVIRVI HTQ  L   R KKAHIMEIQLNGGT+++KV WA++  EK+V V +VF+ +EVIDVI +TKG+G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  S+ARAGQKGYHHRTE+NKKI+RIG G   +    +G +  +K NAST YD+T K+ITP+GGFPHYGEV NDF+M+KG   GT+KR+ITLRKSL+     ++ E I +KFIDT++KFGHGRFQT++EK+  MGP KK  L +E  E +
Sbjct:  153 MKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHME----DGKL--VKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKH-LEKETPETS 404
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Match: RPL3 (ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332])

HSP 1 Score: 256.914 bits (655), Expect = 4.510e-85
Identity = 124/178 (69.66%), Postives = 148/178 (83.15%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYG 537
            MKKYC+VIRVIAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYG
Sbjct:  101 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYG 272
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Match: RPL3 (ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332])

HSP 1 Score: 206.068 bits (523), Expect = 1.141e-64
Identity = 94/126 (74.60%), Postives = 111/126 (88.10%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRT 381
            MKKYC+VIRVIAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRT
Sbjct:  180 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRT 305
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Match: rpl-3 (60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880])

HSP 1 Score: 311.227 bits (796), Expect = 1.961e-106
Identity = 166/258 (64.34%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQ-EAK 771
            K+KKYC  IRVIAHTQ  +  +R KKAH++EIQ+NGGTI  KV+WAR + EK+V+V  VFA +E+ID IG+T+G GFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RV+F+VARAGQKG+HHRT IN KIYRIG   KS + + EG     K N ST++DLT K ITPMGGFP YG V  D+IM++G+ +G +KRLITLRKSL+T TK  + E+I +K+IDTS+K GHGRFQT+ EK+  MG LK+D L + EAK
Sbjct:   54 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG---KSAL-TEEG-----KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 302
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Match: rpl-3 (60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880])

HSP 1 Score: 311.227 bits (796), Expect = 1.961e-106
Identity = 166/258 (64.34%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQ-EAK 771
            K+KKYC  IRVIAHTQ  +  +R KKAH++EIQ+NGGTI  KV+WAR + EK+V+V  VFA +E+ID IG+T+G GFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RV+F+VARAGQKG+HHRT IN KIYRIG   KS + + EG     K N ST++DLT K ITPMGGFP YG V  D+IM++G+ +G +KRLITLRKSL+T TK  + E+I +K+IDTS+K GHGRFQT+ EK+  MG LK+D L + EAK
Sbjct:   54 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG---KSAL-TEEG-----KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 302
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Match: rpl-3 (60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880])

HSP 1 Score: 310.842 bits (795), Expect = 6.830e-105
Identity = 166/258 (64.34%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQ-EAK 771
            K+KKYC  IRVIAHTQ  +  +R KKAH++EIQ+NGGTI  KV+WAR + EK+V+V  VFA +E+ID IG+T+G GFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RV+F+VARAGQKG+HHRT IN KIYRIG   KS + + EG     K N ST++DLT K ITPMGGFP YG V  D+IM++G+ +G +KRLITLRKSL+T TK  + E+I +K+IDTS+K GHGRFQT+ EK+  MG LK+D L + EAK
Sbjct:  152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG---KSAL-TEEG-----KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Match: rpl-3 (60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880])

HSP 1 Score: 310.842 bits (795), Expect = 6.830e-105
Identity = 166/258 (64.34%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQ-EAK 771
            K+KKYC  IRVIAHTQ  +  +R KKAH++EIQ+NGGTI  KV+WAR + EK+V+V  VFA +E+ID IG+T+G GFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RV+F+VARAGQKG+HHRT IN KIYRIG   KS + + EG     K N ST++DLT K ITPMGGFP YG V  D+IM++G+ +G +KRLITLRKSL+T TK  + E+I +K+IDTS+K GHGRFQT+ EK+  MG LK+D L + EAK
Sbjct:  152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG---KSAL-TEEG-----KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Match: rpl-3 (60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880])

HSP 1 Score: 231.491 bits (589), Expect = 1.578e-74
Identity = 129/200 (64.50%), Postives = 157/200 (78.50%), Query Frame = 1 
Query:  175 VFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQ-EAK 771
            V A  ++ID IG+T+G GFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RV+F+VARAGQKG+HHRT IN KIYRIG   KS + + EG     K N ST++DLT K ITPMGGFP YG V  D+IM++G+ +G +KRLITLRKSL+T TK  + E+I +K+IDTS+K GHGRFQT+ EK+  MG LK+D L + EAK
Sbjct:  162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG---KSAL-TEEG-----KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 352
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Fly
Match: RpL3 (gene:FBgn0020910 transcript:FBtr0082346)

HSP 1 Score: 357.836 bits (917), Expect = 4.083e-123
Identity = 181/255 (70.98%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            KM +YCKVIRVIAH+Q  L  QR KKAH+MEIQLNGG+I DKV+WAR + EK ++VSNVF  +E+ID +G+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RVS +VARAGQKGYHHRTEINKKIYRIG G    I + +G +  IK NAST+YDLT K+ITPMGGFPHYGEV NDF+MIKG C+G++KR+ITLRKSL+  TK  + E+I +KFIDTS+K GHGRFQT  +K   MGPLKKDRL++E
Sbjct:  152 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG----IHTKDGKV--IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Fly
Match: RpL3 (gene:FBgn0020910 transcript:FBtr0336783)

HSP 1 Score: 357.836 bits (917), Expect = 4.083e-123
Identity = 181/255 (70.98%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            KM +YCKVIRVIAH+Q  L  QR KKAH+MEIQLNGG+I DKV+WAR + EK ++VSNVF  +E+ID +G+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RVS +VARAGQKGYHHRTEINKKIYRIG G    I + +G +  IK NAST+YDLT K+ITPMGGFPHYGEV NDF+MIKG C+G++KR+ITLRKSL+  TK  + E+I +KFIDTS+K GHGRFQT  +K   MGPLKKDRL++E
Sbjct:  152 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG----IHTKDGKV--IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Zebrafish
Match: rpl3 (ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291])

HSP 1 Score: 344.739 bits (883), Expect = 5.687e-118
Identity = 172/254 (67.72%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC++IR+IAHTQ  L   R KK+H+MEIQLNGGTISDKV+WAR   E+ + ++NVF+ +E+IDVIG+TKG G KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG+G  ++    +G +  +K NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDRL +E
Sbjct:  153 MKKYCQIIRIIAHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNK----DGKL--VKNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRAQEKIDLKFIDTTSKFGHGRFQTIEEKKNFMGPLKKDRLAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Zebrafish
Match: rpl3 (ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291])

HSP 1 Score: 344.739 bits (883), Expect = 5.687e-118
Identity = 172/254 (67.72%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC++IR+IAHTQ  L   R KK+H+MEIQLNGGTISDKV+WAR   E+ + ++NVF+ +E+IDVIG+TKG G KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG+G  ++    +G +  +K NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDRL +E
Sbjct:  153 MKKYCQIIRIIAHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNK----DGKL--VKNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRAQEKIDLKFIDTTSKFGHGRFQTIEEKKNFMGPLKKDRLAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Zebrafish
Match: rpl3 (ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291])

HSP 1 Score: 247.284 bits (630), Expect = 1.065e-82
Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGG--FPHYGEVKNDFIMI 564
            MKKYC++IR+IAHTQ  L   R KK+H+MEIQLNGGTISDKV+WAR   E+ + ++NVF+ +E+IDVIG+TKG G KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG+G  ++    +G +  +K NASTDYDL+ K+I P+       Y E    FI +
Sbjct:    5 MKKYCQIIRIIAHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNK----DGKL--VKNNASTDYDLSNKSINPLVSVLLSPYCEFDKLFICM 187
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Match: mrc1 (mannose receptor C-type 1 [Source:Xenbase;Acc:XB-GENE-494275])

HSP 1 Score: 347.821 bits (891), Expect = 5.122e-119
Identity = 173/254 (68.11%), Postives = 214/254 (84.25%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KK+H+MEIQ+NGGT+++KV+WAR   E++V ++ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  S+    +G +  +K NASTDYDL+ K+I P+GGF HYGEVKNDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT+EEKK  MGPLKKDRL +E
Sbjct:  161 MKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSK----DGKL--VKNNASTDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLKKDRLAKE 408
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Match: mrc1 (mannose receptor C-type 1 [Source:Xenbase;Acc:XB-GENE-494275])

HSP 1 Score: 347.436 bits (890), Expect = 6.676e-119
Identity = 173/254 (68.11%), Postives = 214/254 (84.25%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KK+H+MEIQ+NGGT+++KV+WAR   E++V ++ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  S+    +G +  +K NASTDYDL+ K+I P+GGF HYGEVKNDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT+EEKK  MGPLKKDRL +E
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSK----DGKL--VKNNASTDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLKKDRLAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Match: mrc1 (mannose receptor C-type 1 [Source:Xenbase;Acc:XB-GENE-494275])

HSP 1 Score: 347.051 bits (889), Expect = 1.535e-118
Identity = 173/254 (68.11%), Postives = 214/254 (84.25%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KK+H+MEIQ+NGGT+++KV+WAR   E++V ++ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  S+    +G +  +K NASTDYDL+ K+I P+GGF HYGEVKNDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT+EEKK  MGPLKKDRL +E
Sbjct:  167 MKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSK----DGKL--VKNNASTDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLKKDRLAKE 414
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Match: mrc1 (mannose receptor C-type 1 [Source:Xenbase;Acc:XB-GENE-494275])

HSP 1 Score: 329.717 bits (844), Expect = 4.592e-112
Identity = 164/243 (67.49%), Postives = 204/243 (83.95%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIM 732
            MKKYC+VIRVIAHTQ  L   R KK+H+MEIQ+NGGT+++KV+WAR   E++V ++ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  S+    +G +  +K NASTDYDL+ K+I P+GGF HYGEVKNDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT+EEKK  M
Sbjct:  154 MKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSK----DGKL--VKNNASTDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTAEEKKAFM 390
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Match: rpl3l (ribosomal protein L3 like [Source:NCBI gene;Acc:595000])

HSP 1 Score: 329.331 bits (843), Expect = 8.355e-112
Identity = 166/261 (63.60%), Postives = 208/261 (79.69%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL 786
            MKKYCKVIRVI HTQ  L   R KKAH+MEIQLNGGT++DKV+WA    EK+V V++VF  +E+IDVIG+TKGKG +GVTSRWHTKKL RKTHKGLRKVACIG WHPARV++++ARAGQKGYHHRTEINKKIYRIG GV  +    +G +  +K NA+T YD+T K+ITP+GGFPHYG+V NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E I +KFIDT++KFGHG FQT +EK+  MGP KK  ++ + +    L
Sbjct:  153 MKKYCKVIRVIVHTQMKLLPLRQKKAHVMEIQLNGGTVADKVDWAHEKLEKQVPVNSVFGQDEMIDVIGVTKGKGVRGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGVHME----DGKV--VKNNAATQYDITDKSITPLGGFPHYGQVNNDFLMLKGCVVGTKKRVLTLRKSLLVHTSRRALEPIELKFIDTTSKFGHGCFQTDQEKRAFMGPQKKHMVKDKPEPETEL 407
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Match: Rpl3 (ribosomal protein L3 [Source:MGI Symbol;Acc:MGI:1351605])

HSP 1 Score: 341.273 bits (874), Expect = 1.496e-116
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIR+IAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDFIM+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Match: Rpl3l (ribosomal protein L3-like [Source:MGI Symbol;Acc:MGI:1913461])

HSP 1 Score: 323.553 bits (828), Expect = 1.372e-109
Identity = 165/248 (66.53%), Postives = 198/248 (79.84%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKK 747
            MKKYCKVIRVI HTQ  L   R KKAHIMEIQLNGGT+++KV W ++  EK+V V +VF+ +EVIDVI +TKG+G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  S+ARAGQKGYHHRTE+NKKIYRIG G+   +E  +     ++ NAST YD+T K+ITP+GGFPHYGEV NDFIM+KG   GT+KR+ITLRKSL+     ++ E I +KFIDT++KFGHG FQT++EK+  MGP KK
Sbjct:  153 MKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGL--HMEDGK----MVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRALENIELKFIDTTSKFGHGCFQTAQEKRAFMGPQKK 394
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Match: Rpl3l (ribosomal protein L3-like [Source:MGI Symbol;Acc:MGI:1913461])

HSP 1 Score: 296.59 bits (758), Expect = 1.986e-101
Identity = 153/236 (64.83%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:   67 RDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKE 774
            R KKAHIMEIQLNGGT+++KV W ++  EK+V V +VF+ +EVIDVI +TKG+G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  S+ARAGQKGYHHRTE+NKKIYRIG G+   +E  +     ++ NAST YD+T K+ITP+GGFPHYGEV NDFIM+KG   GT+KR+ITLRKSL+     ++ E I +KFIDT++KFGHG FQT++EK+  MGP KK  L +E  E
Sbjct:    7 RQKKAHIMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGL--HMEDGK----MVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRALENIELKFIDTTSKFGHGCFQTAQEKRAFMGPQKK-HLEKEKPE 235
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Match: Rpl3 (ribosomal protein L3 [Source:MGI Symbol;Acc:MGI:1351605])

HSP 1 Score: 159.844 bits (403), Expect = 4.298e-49
Identity = 77/123 (62.60%), Postives = 94/123 (76.42%), Query Frame = 1 
Query:  121 DKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKI--------YRIGLGVKSQIESAEGIIGNIK 465
            +K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKI         + G G    +E  +  +G +K
Sbjct:    2 EKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 124

HSP 2 Score: 62.3882 bits (150), Expect = 8.453e-12
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:  646 EEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            ++I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:   92 KKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 131
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Match: Rpl3l (ribosomal protein L3-like [Source:MGI Symbol;Acc:MGI:1913461])

HSP 1 Score: 52.7582 bits (125), Expect = 2.119e-8
Identity = 26/33 (78.79%), Postives = 26/33 (78.79%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQL 102
            MKKYCKVIRVI HTQ  L   R KKAHIMEIQL
Sbjct:  101 MKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQL 133
[Close]
BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Match: sp|O16797|RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster OX=7227 GN=RpL3 PE=1 SV=3)

HSP 1 Score: 357.836 bits (917), Expect = 4.092e-122
Identity = 181/255 (70.98%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            KM +YCKVIRVIAH+Q  L  QR KKAH+MEIQLNGG+I DKV+WAR + EK ++VSNVF  +E+ID +G+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHP+RVS +VARAGQKGYHHRTEINKKIYRIG G    I + +G +  IK NAST+YDLT K+ITPMGGFPHYGEV NDF+MIKG C+G++KR+ITLRKSL+  TK  + E+I +KFIDTS+K GHGRFQT  +K   MGPLKKDRL++E
Sbjct:  152 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG----IHTKDGKV--IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Match: sp|P39872|RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus OX=9913 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 342.043 bits (876), Expect = 4.880e-116
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KKAH+ME+Q+NGGT+++K++WAR   E++V VS VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRIAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Match: sp|P27659|RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 341.273 bits (874), Expect = 1.047e-115
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIR+IAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDFIM+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
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BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Match: sp|P39023|RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 1.093e-115
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
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BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Match: sp|P21531|RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 340.887 bits (873), Expect = 1.436e-115
Identity = 173/254 (68.11%), Postives = 212/254 (83.46%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIR+IAHTQ  L   R KKAH+MEIQ+NGGT+++K++WAR   E++V V+ VF  +E+IDVIG+TKGKG+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G   +    +G +  IK NASTDYDL+ K+I P+GGF HYGEV NDFIM+KG  +GT+KR++TLRKSL+  TK ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK----DGKL--IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
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BLAST of 60s ribosomal protein l3 vs. TrEMBL
Match: A0A1S6KMI3 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 4.974e-154
Identity = 222/262 (84.73%), Postives = 235/262 (89.69%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL 786
            KMKKYCKVIRVIAHTQ  + NQR KKAHI EIQLNGGTISDKVEWAR + EK+V VSNVF+PNE+ID IGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTE+NKKIYRIGLGVKSQ   A+  I  IKGNASTDYDLT+KNITPMGGFPHYGEV NDFIMIKG CMG +KRLITLRKSL T  K +  EEII+KF+DTSAKFGHGRFQTSEEK+  MGPLKKDRLRQEAKEIAAL
Sbjct:  153 KMKKYCKVIRVIAHTQMKMLNQRQKKAHITEIQLNGGTISDKVEWAREHLEKQVSVSNVFSPNEMIDCIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEVNKKIYRIGLGVKSQQAEAQNDITKIKGNASTDYDLTVKNITPMGGFPHYGEVNNDFIMIKGCCMGAKKRLITLRKSLHTAHKKRMMEEIIVKFVDTSAKFGHGRFQTSEEKRTFMGPLKKDRLRQEAKEIAAL 414
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BLAST of 60s ribosomal protein l3 vs. TrEMBL
Match: A0A0R3T4U6 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS2083 PE=3 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.334e-125
Identity = 188/261 (72.03%), Postives = 216/261 (82.76%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAE-----------GIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKD 750
            KMKKYC VIRVIAHTQ  L   R KKAHIMEIQ+NGGT++ KV+WAR + EK+V V+NVFA +E+IDVIG+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  SVARAGQKGY HRTE+NKKIYRIGLGV++QIE+A+             +   KGNAST+YDLT KNITPMGGFPHYGEVKND+IMIKG CMG RKR+ITLRKSL+  T  ++ E++++KFIDTS+KFGHGRFQT  EKK  +GPLKKD
Sbjct:  152 KMKKYCAVIRVIAHTQMRLMKHRQKKAHIMEIQVNGGTVAQKVDWAREHLEKQVPVANVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGRSVARAGQKGYFHRTEMNKKIYRIGLGVQAQIEAAKMEAAKEENKELAALIKPKGNASTEYDLTAKNITPMGGFPHYGEVKNDYIMIKGCCMGPRKRVITLRKSLLEQTSRRAQEKVVLKFIDTSSKFGHGRFQTRAEKKAFLGPLKKD 412
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BLAST of 60s ribosomal protein l3 vs. TrEMBL
Match: A0A564Y1K3 (Uncharacterized protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS2065 PE=3 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.790e-125
Identity = 188/261 (72.03%), Postives = 216/261 (82.76%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAE-----------GIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKD 750
            KMKKYC VIRVIAHTQ  L   R KKAHIMEIQ+NGGT++ KV+WAR + EK+V ++NVFA +E+IDVIG+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  SVARAGQKGY HRTE+NKKIYRIGLGV++QIE+A+             +   KGNAST+YDLT KNITPMGGFPHYGEVKND+IMIKG CMG RKR+ITLRKSL+  T  ++ E+I++KFIDTS+KFGHGRFQT  EKK  +GPLKKD
Sbjct:  151 KMKKYCAVIRVIAHTQMRLMKHRQKKAHIMEIQVNGGTVAQKVDWAREHLEKQVPIANVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGRSVARAGQKGYFHRTEMNKKIYRIGLGVQAQIEAAKMEAAKEENKELAALIKPKGNASTEYDLTAKNITPMGGFPHYGEVKNDYIMIKGCCMGPRKRVITLRKSLIQQTSRRAQEKIVLKFIDTSSKFGHGRFQTRAEKKAFLGPLKKD 411
[Close]
BLAST of 60s ribosomal protein l3 vs. TrEMBL
Match: A0A0R3SED6 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS3120 PE=3 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 2.109e-125
Identity = 188/261 (72.03%), Postives = 216/261 (82.76%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAE-----------GIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKD 750
            KMKKYC VIRVIAHTQ  L   R KKAHIMEIQ+NGGT++ KV+WAR + EK+V ++NVFA +E+IDVIG+TKGKGFKGVTSRWHTKKL RKTHKGLRKVACIG WHPARV  SVARAGQKGY HRTE+NKKIYRIGLGV++QIE+A+             +   KGNAST+YDLT KNITPMGGFPHYGEVKND+IMIKG CMG RKR+ITLRKSL+  T  ++ E+I++KFIDTS+KFGHGRFQT  EKK  +GPLKKD
Sbjct:  152 KMKKYCAVIRVIAHTQMRLMKHRQKKAHIMEIQVNGGTVAQKVDWAREHLEKQVPIANVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGRSVARAGQKGYFHRTEMNKKIYRIGLGVQAQIEAAKMEAAKEENKELAALIKPKGNASTEYDLTAKNITPMGGFPHYGEVKNDYIMIKGCCMGPRKRVITLRKSLIQQTSRRAQEKIVLKFIDTSSKFGHGRFQTRAEKKAFLGPLKKD 412
[Close]
BLAST of 60s ribosomal protein l3 vs. TrEMBL
Match: A0A087ZXE4 (Uncharacterized protein OS=Apis mellifera OX=7460 PE=3 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.810e-125
Identity = 188/260 (72.31%), Postives = 216/260 (83.08%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIA 780
            K+ KYCKV+R+IAHTQ  L  QR KKAHIMEIQLNGGTI  KV+WAR + EK V VSNVFAP+E+IDVIG+TKGKG+KGVTSRWHTKKL RKTHKGLRKVACIG WHP+RVSF+VARAGQKGYHHRTE+NKKIYRIG G    I + +G I  +K NAST+YDLT K ITPMGGFPHYGEV NDFIMIKG CMG +KR+ITLRKSL+  TK  + E+I +KFIDTS+KFGHGRFQT+ +K   MG LKKDR+R+E +  A
Sbjct:   48 KIIKYCKVVRIIAHTQMKLLRQRQKKAHIMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----IHTKDGKI--VKNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSALEKINLKFIDTSSKFGHGRFQTAADKTSFMGQLKKDRMREEQQAQA 301
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BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:103021491])

HSP 1 Score: 339.732 bits (870), Expect = 3.610e-116
Identity = 171/254 (67.32%), Postives = 210/254 (82.68%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYCKVIRV+AHTQ  L   R K++H+MEIQLNGGTISDK++WAR   E+ V ++ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY++G G  ++    +G +  IK NAST YD++ K+I PMGGF HYGEV NDF+M+KG  +GT+KR++TLRKSL+T T  K+ E+I +KF+DT++KFGHGRFQT +EKK  MGPLKKDRL +E
Sbjct:  153 MKKYCKVIRVLAHTQMRLLPLRQKRSHLMEIQLNGGTISDKIDWAREKLEQAVPINTVFGQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYHTK----DGKL--IKNNASTTYDISNKSINPMGGFVHYGEVTNDFLMLKGCVIGTKKRVLTLRKSLLTQTTRKAQEKIDLKFVDTTSKFGHGRFQTMDEKKAFMGPLKKDRLAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 322.398 bits (825), Expect = 2.049e-109
Identity = 163/258 (63.18%), Postives = 198/258 (76.74%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEI 777
            MKKYC VIRVI H+Q  L   R KKAH+ME+QLNGGT+++KV+W R   E+ V VS VF  NE+IDVIG+TKG G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV +++ARAGQKGYHHRTE+NKKIYRIG GV  Q    +G +  +  NAST YD T K ITPMGGFP YGEV NDF+M+KG  +G +KR++TLRKS++  +  K+ E I +KFIDT++KFGHG FQT +EK   MGPLKK  L++  + +
Sbjct:  140 MKKYCSVIRVIVHSQMRLLPLRQKKAHVMEVQLNGGTVAEKVDWVRERLEQPVPVSAVFCQNEMIDVIGVTKGHGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTELNKKIYRIGKGVHIQ----DGKV--VHNNASTSYDTTQKTITPMGGFPRYGEVNNDFLMLKGCVVGAKKRVLTLRKSMLEQSSRKARESIELKFIDTTSKFGHGCFQTPQEKFAFMGPLKKHLLKKAPEPV 391
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 310.457 bits (794), Expect = 5.171e-104
Identity = 159/253 (62.85%), Postives = 192/253 (75.89%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIM----GPLKKD 750
            MKKYC VIRVI H+Q  L   R KKAH+ME+QLNGGT+++KV+W R   E+ V VS VF  NE+IDVIG+TKG G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV +++ARAGQKGYHHRTE+NKKIYRIG GV  Q    +G +  +  NAST YD T K ITPMGGFP YGEV NDF+M+KG  +G +KR++TLRKS++  +  K+ E I +KFIDT++KFGHG FQT +EK   M     PL ++
Sbjct:  140 MKKYCSVIRVIVHSQMRLLPLRQKKAHVMEVQLNGGTVAEKVDWVRERLEQPVPVSAVFCQNEMIDVIGVTKGHGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTELNKKIYRIGKGVHIQ----DGKV--VHNNASTSYDTTQKTITPMGGFPRYGEVNNDFLMLKGCVVGAKKRVLTLRKSMLEQSSRKARESIELKFIDTTSKFGHGCFQTPQEKFAFMVSQAAPLNQN 386
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 310.457 bits (794), Expect = 5.171e-104
Identity = 159/253 (62.85%), Postives = 192/253 (75.89%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIM----GPLKKD 750
            MKKYC VIRVI H+Q  L   R KKAH+ME+QLNGGT+++KV+W R   E+ V VS VF  NE+IDVIG+TKG G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV +++ARAGQKGYHHRTE+NKKIYRIG GV  Q    +G +  +  NAST YD T K ITPMGGFP YGEV NDF+M+KG  +G +KR++TLRKS++  +  K+ E I +KFIDT++KFGHG FQT +EK   M     PL ++
Sbjct:  140 MKKYCSVIRVIVHSQMRLLPLRQKKAHVMEVQLNGGTVAEKVDWVRERLEQPVPVSAVFCQNEMIDVIGVTKGHGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTELNKKIYRIGKGVHIQ----DGKV--VHNNASTSYDTTQKTITPMGGFPRYGEVNNDFLMLKGCVVGAKKRVLTLRKSMLEQSSRKARESIELKFIDTTSKFGHGCFQTPQEKFAFMVSQAAPLNQN 386
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 310.457 bits (794), Expect = 8.881e-104
Identity = 159/253 (62.85%), Postives = 192/253 (75.89%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIM----GPLKKD 750
            MKKYC VIRVI H+Q  L   R KKAH+ME+QLNGGT+++KV+W R   E+ V VS VF  NE+IDVIG+TKG G KGVTSRWHTKKL RKTHKGLRKVACIG WHPARV +++ARAGQKGYHHRTE+NKKIYRIG GV  Q    +G +  +  NAST YD T K ITPMGGFP YGEV NDF+M+KG  +G +KR++TLRKS++  +  K+ E I +KFIDT++KFGHG FQT +EK   M     PL ++
Sbjct:  153 MKKYCSVIRVIVHSQMRLLPLRQKKAHVMEVQLNGGTVAEKVDWVRERLEQPVPVSAVFCQNEMIDVIGVTKGHGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTELNKKIYRIGKGVHIQ----DGKV--VHNNASTSYDTTQKTITPMGGFPRYGEVNNDFLMLKGCVVGAKKRVLTLRKSMLEQSSRKARESIELKFIDTTSKFGHGCFQTPQEKFAFMVSQAAPLNQN 399
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Sea Lamprey
Match: RPL3L (ribosomal protein L3 like [Source:HGNC Symbol;Acc:HGNC:10351])

HSP 1 Score: 351.673 bits (901), Expect = 3.659e-123
Identity = 175/254 (68.90%), Postives = 215/254 (84.65%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKK+C VIRVIAHTQ  L   R KKAH+ME+Q+NGG++SDKV+WAR   EK V V++VF  +E+IDVIG+TKG+GFKGVTSRWHTKKLQRKTHKGLRKVACIG WHPARV+FS+ARAGQKGYHHRTE NKK++RIG G+  Q    +G I  +K NAST+YD+T K+ITPMGGFPHYGEVKNDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFG+GRFQT+EEKK  MGPLKKD ++QE
Sbjct:   33 MKKHCCVIRVIAHTQMKLLPLRQKKAHLMEVQVNGGSVSDKVDWAREKLEKAVPVTSVFGQDEMIDVIGVTKGRGFKGVTSRWHTKKLQRKTHKGLRKVACIGAWHPARVNFSIARAGQKGYHHRTEKNKKVFRIGRGIHMQ----DGKI--VKNNASTNYDMTDKSITPMGGFPHYGEVKNDFVMVKGCVVGTKKRVLTLRKSLLHPTHRRAMEKIDLKFIDTTSKFGYGRFQTAEEKKAFMGPLKKDLIKQE 280
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Sea Lamprey
Match: mrpl3 (mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227])

HSP 1 Score: 46.9802 bits (110), Expect = 1.660e-6
Identity = 30/82 (36.59%), Postives = 41/82 (50.00%), Query Frame = 1 
Query:  178 FAPNEVIDVIGITKGKGFKGVTSRW-----HTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRI 408
            F P + +DV   T GKGF+GV  RW          Q KTH+ +  +A  G   PARV       G+ G  +RTE   K++R+
Sbjct:  173 FRPGQYVDVTAKTIGKGFQGVMKRWGYSGQPATHGQTKTHRRMGAIAAAG---PARVWPGTKMPGRMGNIYRTEHGLKVWRV 251
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Yeast
Match: RPL3 (Ribosomal 60S subunit protein L3; homologous to mammalian ribosomal protein L3 and bacterial L3; plays an important role in function of eIF5B in stimulating 3' end processing of 18S rRNA in context of 80S ribosomes that have not yet engaged in translation; involved in replication and maintenance of killer double stranded RNA virus [Source:SGD;Acc:S000005589])

HSP 1 Score: 285.804 bits (730), Expect = 5.693e-96
Identity = 150/250 (60.00%), Postives = 181/250 (72.40%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKD 750
            ++KKY  V+RV+ HTQ        KKAH+ EIQLNGG+IS+KV+WAR +FEK V V +VF  NE+ID I +TKG GF+GVT RW TKKL RKTH+GLRKVACIG WHPA V +SVARAGQ+GYH RT IN KIYR+G              G+ + N +T +D T K ITPMGGF HYGE+KNDFIM+KG   G RKR++TLRKSL T T  K+ EE+ +K+IDT++KFG GRFQT  EK   MG LKKD
Sbjct:  150 RIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGK-------------GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLKKD 386
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Nematostella
Match: EDO32729 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU78])

HSP 1 Score: 323.168 bits (827), Expect = 4.636e-110
Identity = 171/261 (65.52%), Postives = 199/261 (76.25%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGG-TISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAA 783
            MKKYCKVIRVI HTQ  L   R KKAHIMEIQ+NGG  +++KV+W R   E    V  VF+P+E+IDVIG+TKG GFKGVT RW TKKL RKTHKGLRKVACIG WHPARVSFSVARAGQ GYHHRTE+NKKIYRIG G    I   +G +  IK NAST+YDLT K+ITPMGGFPHYG+V  DF+M+KG  +G +KR++TLRKSL+  T   + E+I +KFIDTS+KFGHGRFQ   EK+  MG LK DR     KE+AA
Sbjct:  153 MKKYCKVIRVICHTQQKLLKMRQKKAHIMEIQVNGGKDVAEKVDWCRERLENPAPVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLPRKTHKGLRKVACIGAWHPARVSFSVARAGQAGYHHRTELNKKIYRIGQG----IHKKDGKV--IKNNASTEYDLTDKSITPMGGFPHYGQVNEDFLMVKGCVVGPKKRVLTLRKSLLVHTSRDAAEKITLKFIDTSSKFGHGRFQHPAEKRAFMGMLKSDR----EKELAA 403
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Nematostella
Match: EDO32728 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU77])

HSP 1 Score: 148.288 bits (373), Expect = 1.313e-45
Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 1 
Query:  166 VSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGV 420
            V  VF+P+E+IDVIG+TKG GFKGVT RW TKKL RKTHKGLRKVACIG WHPARVSFSVARAGQ GYHHRTE+NKKIYRIG G+
Sbjct:    2 VRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLPRKTHKGLRKVACIGAWHPARVSFSVARAGQAGYHHRTELNKKIYRIGQGI 86
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:101166874])

HSP 1 Score: 340.117 bits (871), Expect = 1.760e-116
Identity = 170/254 (66.93%), Postives = 210/254 (82.68%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   + KK+H+ME+QLNGGTISDKV+WAR   E+ V V+ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  ++    +G +  +K NAST+YDL+ K+I P+GGF HYG+V NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  132 MKKYCQVIRVIAHTQMRLLPLKQKKSHLMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK----DGKV--VKNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLKKDRIAKE 379
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:101166874])

HSP 1 Score: 339.732 bits (870), Expect = 4.218e-116
Identity = 170/254 (66.93%), Postives = 210/254 (82.68%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   + KK+H+ME+QLNGGTISDKV+WAR   E+ V V+ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  ++    +G +  +K NAST+YDL+ K+I P+GGF HYG+V NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  156 MKKYCQVIRVIAHTQMRLLPLKQKKSHLMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK----DGKV--VKNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLKKDRIAKE 403
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:101166874])

HSP 1 Score: 339.732 bits (870), Expect = 4.922e-116
Identity = 170/254 (66.93%), Postives = 210/254 (82.68%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   + KK+H+ME+QLNGGTISDKV+WAR   E+ V V+ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  ++    +G +  +K NAST+YDL+ K+I P+GGF HYG+V NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLKQKKSHLMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK----DGKV--VKNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLKKDRIAKE 400
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:101166874])

HSP 1 Score: 339.732 bits (870), Expect = 7.893e-116
Identity = 170/254 (66.93%), Postives = 210/254 (82.68%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQE 765
            MKKYC+VIRVIAHTQ  L   + KK+H+ME+QLNGGTISDKV+WAR   E+ V V+ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  ++    +G +  +K NAST+YDL+ K+I P+GGF HYG+V NDF+M+KG  +GT+KR++TLRKSL+  T  ++ E+I +KFIDT++KFGHGRFQT EEKK  MGPLKKDR+ +E
Sbjct:  176 MKKYCQVIRVIAHTQMRLLPLKQKKSHLMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK----DGKV--VKNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLKKDRIAKE 423
[Close]
BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Match: rpl3 (60S ribosomal protein L3 [Source:NCBI gene;Acc:101166874])

HSP 1 Score: 283.878 bits (725), Expect = 1.073e-94
Identity = 134/199 (67.34%), Postives = 165/199 (82.91%), Query Frame = 1 
Query:    4 MKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLI 600
            MKKYC+VIRVIAHTQ  L   + KK+H+ME+QLNGGTISDKV+WAR   E+ V V+ VF  +E+IDVIG+TKG G+KGVTSRWHTKKL RKTH+GLRKVACIG WHPARV+FSVARAGQKGYHHRTEINKKIY+IG G  ++    +G +  +K NAST+YDL+ K+I P+GGF HYG+V NDF+M+KG  +GT+KR++
Sbjct:  153 MKKYCQVIRVIAHTQMRLLPLKQKKSHLMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK----DGKV--VKNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVL 345
[Close]
BLAST of 60s ribosomal protein l3 vs. Planmine SMEST
Match: SMESG000081260.1 (SMESG000081260.1)

HSP 1 Score: 499.975 bits (1286), Expect = 1.459e-180
Identity = 259/262 (98.85%), Postives = 261/262 (99.62%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL 786
            KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVF PNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNAST+YDLT+KNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLITLRKSLMTTTKLKSTEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL
Sbjct:   69 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFTPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTEYDLTVKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLITLRKSLMTTTKLKSTEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL 330
[Close]
BLAST of 60s ribosomal protein l3 vs. Planmine SMEST
Match: SMESG000022732.1 (SMESG000022732.1)

HSP 1 Score: 445.277 bits (1144), Expect = 1.383e-157
Identity = 222/262 (84.73%), Postives = 235/262 (89.69%), Query Frame = 1 
Query:    1 KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNFEKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGIIGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLIXXXXXXXXXXXXXXXEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKDRLRQEAKEIAAL 786
            KMKKYCKVIRVIAHTQ  + NQR KKAHI EIQLNGGTISDKVEWAR + EK+V VSNVF+PNE+ID IGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTE+NKKIYRIGLGVKSQ   A+  I  IKGNASTDYDLT+KNITPMGGFPHYGEV NDFIMIKG CMG +KRLITLRKSL T  K +  EEII+KF+DTSAKFGHGRFQTSEEK+  MGPLKKDRLRQEAKEIAAL
Sbjct:  153 KMKKYCKVIRVIAHTQMKMLNQRQKKAHITEIQLNGGTISDKVEWAREHLEKQVSVSNVFSPNEMIDCIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKVACIGPWHPARVSFSVARAGQKGYHHRTEVNKKIYRIGLGVKSQQAEAQNDITKIKGNASTDYDLTVKNITPMGGFPHYGEVNNDFIMIKGCCMGAKKRLITLRKSLHTAHKKRMMEEIIVKFVDTSAKFGHGRFQTSEEKRTFMGPLKKDRLRQEAKEIAAL 414
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPL33.527e-11768.11ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPL32.277e-11668.11ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPL3L1.538e-11165.25ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
RPL34.510e-8569.66ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPL31.141e-6474.60ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl-31.961e-10664.3460S ribosomal protein L3 [Source:UniProtKB/Swiss-... [more]
rpl-31.961e-10664.3460S ribosomal protein L3 [Source:UniProtKB/Swiss-... [more]
rpl-36.830e-10564.3460S ribosomal protein L3 [Source:UniProtKB/Swiss-... [more]
rpl-36.830e-10564.3460S ribosomal protein L3 [Source:UniProtKB/Swiss-... [more]
rpl-31.578e-7464.5060S ribosomal protein L3 [Source:UniProtKB/Swiss-... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RpL34.083e-12370.98gene:FBgn0020910 transcript:FBtr0082346[more]
RpL34.083e-12370.98gene:FBgn0020910 transcript:FBtr0336783[more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl35.687e-11867.72ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
rpl35.687e-11867.72ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
rpl31.065e-8264.02ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mrc15.122e-11968.11mannose receptor C-type 1 [Source:Xenbase;Acc:XB-G... [more]
mrc16.676e-11968.11mannose receptor C-type 1 [Source:Xenbase;Acc:XB-G... [more]
mrc11.535e-11868.11mannose receptor C-type 1 [Source:Xenbase;Acc:XB-G... [more]
mrc14.592e-11267.49mannose receptor C-type 1 [Source:Xenbase;Acc:XB-G... [more]
rpl3l8.355e-11263.60ribosomal protein L3 like [Source:NCBI gene;Acc:59... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rpl31.496e-11668.11ribosomal protein L3 [Source:MGI Symbol;Acc:MGI:13... [more]
Rpl3l1.372e-10966.53ribosomal protein L3-like [Source:MGI Symbol;Acc:M... [more]
Rpl3l1.986e-10164.83ribosomal protein L3-like [Source:MGI Symbol;Acc:M... [more]
Rpl34.298e-4962.60ribosomal protein L3 [Source:MGI Symbol;Acc:MGI:13... [more]
Rpl3l2.119e-878.79ribosomal protein L3-like [Source:MGI Symbol;Acc:M... [more]
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BLAST of 60s ribosomal protein l3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O16797|RL3_DROME4.092e-12270.9860S ribosomal protein L3 OS=Drosophila melanogaste... [more]
sp|P39872|RL3_BOVIN4.880e-11668.1160S ribosomal protein L3 OS=Bos taurus OX=9913 GN=... [more]
sp|P27659|RL3_MOUSE1.047e-11568.1160S ribosomal protein L3 OS=Mus musculus OX=10090 ... [more]
sp|P39023|RL3_HUMAN1.093e-11568.1160S ribosomal protein L3 OS=Homo sapiens OX=9606 G... [more]
sp|P21531|RL3_RAT1.436e-11568.1160S ribosomal protein L3 OS=Rattus norvegicus OX=1... [more]
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BLAST of 60s ribosomal protein l3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S6KMI34.974e-15484.73Uncharacterized protein OS=Schmidtea mediterranea ... [more]
A0A0R3T4U61.334e-12572.03Uncharacterized protein OS=Rodentolepis nana OX=10... [more]
A0A564Y1K31.790e-12572.03Uncharacterized protein (Fragment) OS=Hymenolepis ... [more]
A0A0R3SED62.109e-12572.03Uncharacterized protein OS=Hymenolepis diminuta OX... [more]
A0A087ZXE42.810e-12572.31Uncharacterized protein OS=Apis mellifera OX=7460 ... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl33.610e-11667.3260S ribosomal protein L3 [Source:NCBI gene;Acc:103... [more]
RPL3L2.049e-10963.18ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
RPL3L5.171e-10462.85ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
RPL3L5.171e-10462.85ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
RPL3L8.881e-10462.85ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RPL3L3.659e-12368.90ribosomal protein L3 like [Source:HGNC Symbol;Acc:... [more]
mrpl31.660e-636.59mitochondrial ribosomal protein L3 [Source:ZFIN;Ac... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
RPL35.693e-9660.00Ribosomal 60S subunit protein L3; homologous to ma... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO327294.636e-11065.52Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO327281.313e-4582.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60s ribosomal protein l3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl31.760e-11666.9360S ribosomal protein L3 [Source:NCBI gene;Acc:101... [more]
rpl34.218e-11666.9360S ribosomal protein L3 [Source:NCBI gene;Acc:101... [more]
rpl34.922e-11666.9360S ribosomal protein L3 [Source:NCBI gene;Acc:101... [more]
rpl37.893e-11666.9360S ribosomal protein L3 [Source:NCBI gene;Acc:101... [more]
rpl31.073e-9467.3460S ribosomal protein L3 [Source:NCBI gene;Acc:101... [more]
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BLAST of 60s ribosomal protein l3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000081260.11.459e-18098.85SMESG000081260.1[more]
SMESG000022732.11.383e-15784.73SMESG000022732.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30005998 ID=SMED30005998|Name=60s ribosomal protein l3|organism=Schmidtea mediterranea sexual|type=transcript|length=818bp
AAAATGAAAAAATACTGCAAAGTCATTCGAGTAATTGCTCACACTCAGAC
AAGTCTTAGAAACCAAAGAGATAAGAAAGCACATATTATGGAAATCCAAT
TGAATGGTGGTACTATTTCAGACAAAGTCGAATGGGCAAGATCAAATTTC
GAGAAGGAAGTAAAAGTGTCCAATGTATTTGCACCAAATGAAGTTATTGA
TGTAATTGGTATTACTAAAGGTAAAGGATTCAAAGGTGTTACTTCAAGAT
GGCACACAAAGAAACTTCAAAGAAAAACTCACAAAGGTCTGAGAAAAGTT
GCTTGCATCGGTCCATGGCATCCAGCCCGAGTTTCTTTCTCAGTTGCAAG
AGCCGGTCAAAAAGGATACCACCATAGAACTGAAATAAACAAGAAAATCT
ATAGAATCGGCCTTGGAGTCAAGTCTCAAATCGAATCGGCTGAAGGTATC
ATTGGAAACATCAAAGGGAACGCAAGCACAGATTATGACTTGACTATAAA
AAACATAACTCCAATGGGAGGTTTCCCACATTATGGTGAAGTTAAAAACG
ATTTCATAATGATAAAAGGCAGCTGTATGGGTACAAGAAAACGATTGATA
ACTCTGAGAAAATCATTGATGACAACTACAAAATTGAAATCAACCGAGGA
AATTATCATTAAATTTATTGACACGTCAGCTAAATTCGGTCACGGAAGAT
TCCAAACTTCAGAAGAAAAGAAACAAATCATGGGACCACTTAAAAAAGAT
AGATTACGTCAAGAAGCCAAAGAAATTGCTGCTTTGTAATATTTCAATAA
ATAAATTTGAGATCGGAA
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protein sequence of SMED30005998-orf-1

>SMED30005998-orf-1 ID=SMED30005998-orf-1|Name=SMED30005998-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=263bp
KMKKYCKVIRVIAHTQTSLRNQRDKKAHIMEIQLNGGTISDKVEWARSNF
EKEVKVSNVFAPNEVIDVIGITKGKGFKGVTSRWHTKKLQRKTHKGLRKV
ACIGPWHPARVSFSVARAGQKGYHHRTEINKKIYRIGLGVKSQIESAEGI
IGNIKGNASTDYDLTIKNITPMGGFPHYGEVKNDFIMIKGSCMGTRKRLI
TLRKSLMTTTKLKSTEEIIIKFIDTSAKFGHGRFQTSEEKKQIMGPLKKD
RLRQEAKEIAAL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR000597Ribosomal_L3
IPR019926Ribosomal_L3_CS
IPR009000Transl_B-barrel_sf
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
GO:0005737cytoplasm
GO:0022625cytosolic large ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0002181cytoplasmic translation
GO:0019233sensory perception of pain
GO:0051297centrosome organization
GO:0051298centrosome duplication
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.30.10coord: 100..257
e-value: 1.1E-58
score: 199.6
NoneNo IPR availableGENE3DG3DSA:3.30.1430.10coord: 1..54
e-value: 4.1E-24
score: 87.1
NoneNo IPR availablePANTHERPTHR11363:SF760S RIBOSOMAL PROTEIN L3-LIKEcoord: 2..255
NoneNo IPR availablePANTHERPTHR1136360S RIBOSOMAL PROTEIN L3-RELATEDcoord: 2..255
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 1..230
e-value: 2.0E-96
score: 323.2
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 60..83
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILYSSF50447Translation proteinscoord: 2..230