G-protein coupled receptor

Overview
NameG-protein coupled receptor
Smed IDSMED30005929
Length (bp)2085
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of G-protein coupled receptor (SMED30005929) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for G-protein coupled receptor (SMED30005929) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30005929

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30005929h1SMcG0019294 dd_Smed_v4_38260_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30005929h1SMcG0019294 dd_Smed_v4_38260_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of G-protein coupled receptor vs. TrEMBL
Match: R7UAT5 (G_PROTEIN_RECEP_F2_4 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_192473 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.251e-13
Identity = 135/586 (23.04%), Postives = 234/586 (39.93%), Query Frame = 3
Query:  438 CYCDDQCSLFGDCCHKHQQHHEPIASCH--------DGYYVIDKCLYKSTDGNLKDKCE----RKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEF-------ARVEKHKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSYKY------RLVVPTEIKA----LDFXXXXXXXXXXXXXXYQI-----------------NQTTFRNHSDSISCTENK--NFQFFEKV----------LTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVEN--PSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYGMDVHKTTTKYIRSITENISSFATRKQSNA 2015
            C C   C  F DCC K     E +ASC            YVID+C    TD  ++ KCE       ++S +  L  VP  G   +  + ++N FCA C+      F        R+   + +++             ++        C   V+ +C D +   L   C    T  V +N G+    Y+N  C  CN  +              ++ P  I      LD N          L  Y++                  Q    N    I   ENK  N   FE++          LT+    +S+  LL ++L + C    RN   K  + L +S+L   +   +++   N    +  C+  ++  HF FLS F WM + A DV++S     + ++      +SR   FY L  + LP ++ + +  +  F +   + P++G+  C++    G LV F  P+ I L+ N  +  +  R +    + +  +  S    ++  +L +KL+++ G  W+  F+   F++ IL +I   L++ QGL + + F++   V +   K     T+    F T  +S+A
Sbjct:   48 CSCSPMCDFFDDCCDKESTQREEVASCRLRPTMPVRHFVYVIDRCPRDYTDDVIRGKCEDTKTGNDKLSTDGALPLVPVSG--ASSGMLYRNIFCAACHSVEDASFWVAEVPIRRLVAEEGAIRMAFQAALVAGRVTFSHLTFSAPFCRPRVVKSCPDSATKELASECVRGATSRVFQN-GIA---YKNIACASCNGANATSCVDPLPPLINHMIPPKRIMPYSLLLDLNTGSAALQTNRLGFYKVISLSDNSTNCSDLTYDPYQEKCSNLCSIIPSIENKVCNTSKFEEMVFKFDVGLGYLTLVGSALSIFGLLLLLLAYTCLPGLRNTPGKSLMSLAVSLL---LAQALYASGLNLMQPRSLCVSMAMFVHFFFLSQFCWMNVLAFDVWRSFRMHNIGLHSRLR-TRSRHFVFYCLYAWLLPAVVVLISFLLDLFQAS--IRPAYGQSFCWLGSRRGLLVLFASPISIMLIFNCGLFSLTARSLCIAGEDSDLLNLSRREHRRRLLLYVKLAVVMGLAWVFGFLATAFDSKILWYIFTALNTFQGLFICISFVFTQKVLRLLRK---KFTKGSGRFETSSRSHA 618          
BLAST of G-protein coupled receptor vs. TrEMBL
Match: A0A4D5RNS5 (Putative g protein-coupled receptor OS=Ixodes scapularis OX=6945 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.299e-11
Identity = 102/490 (20.82%), Postives = 204/490 (41.63%), Query Frame = 3
Query:  528 YYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCN--GKNQFEFARVEKHKTSLKR-KKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFY--VTENRGMVQKIYRNAYCFLCNTNSLQW--------------SYKYRLVVPTE---------IKALD---------FXXXXXXXXXXXXXXYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRL--RINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEK---KNFILCIKLSILFGATWLPAFVGVFFNNYILKFI 1871
            +Y++  CL      +++  CE           Y +P   + +   +T+KN +CA+CN    N   +  +E   + +   K  +      Y +  P    R   E+   TC + + + +   C+   TFY  +T  +      YRN YC +CN  +L                 Y+   ++P           ++  D         F +               NQT  + H          +F   +  LT+    +S+  L   V+VF    + R+ +SK TL L+I++L   +  ++ +  +  S   C   ++  H+ FLS+FFW ++ + D+++SIT+ +L  R N T A           +  +G P+++ + A  +      ++++P +G   C+I ++   + +F  P+ I L   I++      +I K   +  +      +++    +  L ++L+++ GATW   F+GVF ++ +   +
Sbjct:  120 FYMVTGCLPDWPIDDVRKACEESRNF--KETFYKIPVTSSTD---ITYKNGYCALCNYDLANTTFWNAIETPSSPITYFKLPDIIATQPYLHLRP--CSRRPQED---TCPEGTSENIVQKCK---TFYAPITTLKDEESPEYRNVYCAMCNGANLSALSCKPAEELSRFPVPYRQIAILPDPNLVTIFHPVLRTEDCYVKHRNRCFIKSPPELLRRQHDENSTNQTERKQH--------EMHFYTVQNYLTIVCVSLSICCLFLKVVVFSIYKEARSFSSKCTLCLSITLLMTQLLFLLVNSFKV-SAPVCTASAMLVHYGFLSTFFWTSVISFDIWRSITAAKLSSRRNSTLAFYS--------VTAWGAPMIIVVIAATVNWLAPTSLMSPLYGYSSCWIGRIWAQIAYFLAPMAILLAIGIVLYLNTVFYIRKTTDRARDFESKDGIQRSQHSHMTLFVRLALIMGATWGVGFLGVFVDSTVTDIL 579          
BLAST of G-protein coupled receptor vs. TrEMBL
Match: A0A147BLH7 (Putative g protein-coupled receptor OS=Ixodes ricinus OX=34613 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.090e-11
Identity = 63/253 (24.90%), Postives = 127/253 (50.20%), Query Frame = 3
Query: 1146 FQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVEN--PSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFI---------LCIKLSILFGATWLPAFVGVFFNNYILKFI 1871
            F   +  LT+    +S+  L   V+VF    D R+ +SK TL L+I++L   +T ++F +V +   S+  C   ++  HF FLS+FFW ++ + D+++ IT+  L      +  + R L  Y +  +G P+++   A  +      ++++P +G   C+I  +   + +F  P+ + L+  +++      +I K        GH+ + E K+ +         L ++L+++ GATW   F+GVF ++ +   +
Sbjct:  356 FYTVQNYLTIVCVSLSICCLFLKVVVFSIYKDARSFSSKCTLCLSITLL---MTQLVFLLVNSFKVSRAVCTASAMLVHFGFLSTFFWTSVLSFDIWRGITAVNL------SSTRKRTLALYSVVAWGAPMIIVTVAAMVNWLAPTSLVSPLYGISSCWIGSIWAQITYFLAPMAVLLVIGVVLYLNTVFYIRKTT------GHARDFEFKDGVQQSQHSHMALYVRLALIMGATWGVGFLGVFVDSTVTDIL 593          
BLAST of G-protein coupled receptor vs. TrEMBL
Match: B7QM22 (7 transmembrane receptor (Secretin family) superfamily protein OS=Ixodes scapularis OX=6945 GN=8043291 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.113e-10
Identity = 105/435 (24.14%), Postives = 177/435 (40.69%), Query Frame = 3
Query:  663 LTFKNAFCAVCNGKNQFEFARVEKHKTSLKRKKDNTTEKSNYKYTFPKEFQRIC--HENVIITCDDDSEDALKLLCRNQPTFYVTENRG-MVQKIYRNAYCFLCN-TNSLQWSYKYRLVVPTEIKALDFXXXXXXXXXXXXXXYQINQTTFRNHSD--------------------------SISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCI--QKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFI 1871
            +T++NAFCA+CN     + A    + TS  R+    T         P    R C  H  +  +C + S+      C     F   + +G   + IY+N YC LCN  + L+      LVVP E   L        N   LL+    + + F  HS+                          + + +E + +   +  LTV    +S++ LL   LV+      R  +S+ TL L+ ++    +  ++ + +E P    C   +I  H+ FLS+FFW ++ + D++K++   RL   ++   I                  L I A+C+         +L+P +    C+I    G + +F  P+   L+ +I +   +   I K  +Q          ++ +  L IKL  + G TWL  FVGVF NN  +  I
Sbjct:  159 VTYRNAFCALCN--YDLDNATTFWNATSKIRRYFKVTTPDMADENKPLHL-RPCAFHTRINDSCLEGSDSETVRRCHTY--FAPVKPKGNESEVIYKNIYCGLCNGADPLELECAPMLVVP-ETWFLPQLRSGRPNLLSLLRPVLTSDSCFSWHSNKCYIRAPQYRYNASVTGANASLVNGTNATASEQQPYDI-QNYLTVVCVSLSLLCLLLKGLVYILYKSSRTFSSRCTLCLSATLFWSQLIFLLVNSLEVPHS-VCTGSAIVLHYGFLSTFFWTSVLSFDIWKNVAGVRLTSGRSSGFIA--------YCLIAWGGPLAIVAICVLLNWTAPTFVLSPRYARRGCWIGSFWGQVTFFLFPMFALLILDIGLYVHIVYHIRKTVKQAANFDFRGGAQRSHMALFIKLGFIIGTTWLLGFVGVFVNNVAMDII 577          
BLAST of G-protein coupled receptor vs. TrEMBL
Match: A0A3S3P2X5 (G_PROTEIN_RECEP_F2_4 domain-containing protein (Fragment) OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_14444 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.332e-9
Identity = 63/243 (25.93%), Postives = 112/243 (46.09%), Query Frame = 3
Query: 1155 FEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENP----SKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFI 1871
            ++ + T   + +S++ L   ++++       N   K  + L+ ++L   + NI F++  +     S   CL  ++  H+ +L+SFFWM + + D+YK   S  L +        +R    Y L  +  P    +  +C   F  ENI  P +G   C+IN+    L++F IPL   +  N I   +    + K N +T  + +  N  + N +L +KLS+  G TW+   V  F  N I  F+
Sbjct:  351 WKSLFTEVIQKLSIVGLSLHLIIYSLVPKLHNVPGKCLMSLSFALL---MANICFAIAASTYIIQSSSLCLTVALFVHYFYLASFFWMNVISFDMYKCFDSGLLSLRS----WDNRCFLVYSLYSWLSPAAFVVVGLCFDVFTEENIFQPLYGFSLCWINRRSALLIYFGIPLTTIISVNTIFFTLTAMSLIKTNCETSLIRN--NQTEINILLHLKLSLTMGLTWIFGIVFAFTENTIFWFL 584          
BLAST of G-protein coupled receptor vs. Ensembl Nematostella
Match: EDO34420 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPE2])

HSP 1 Score: 59.6918 bits (143), Expect = 2.741e-9
Identity = 55/225 (24.44%), Postives = 99/225 (44.00%), Query Frame = 3
Query: 1164 VLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQ-CFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNF-ILCIKLSILFGATWLPAF 1832
             LT+    +SMISL+ ++  +    + RN   ++ L L I++L   +  + F V ++ ++  C+  +++ HF  LS+F WM + A DV+ + T P  R   +          +          ++TI+       D        +G  + CFI      L  F +P+ I LL N I        I  + ++T +  +     K N  I+C K++   G TW+ A+
Sbjct:  413 ALTIAGCALSMISLVVLIFSYAVLPELRNLPGRVVLSLAITMLLYHL--LYFLVNQSDTRALCVAVAVSLHFALLSAFCWMNVLAFDVHHTFTKPGQRRTASRGHCPGTYAIYAAYSWGIPLAIVTISF----SVDLSGSWRIGYGRGEYCFIENPSAMLYLFLLPVAIILLYNFIALFHTMWHIRAVRKKTSKASN--QQRKPNLPIICFKMTSAMGITWVLAY 629          

HSP 2 Score: 48.521 bits (114), Expect = 9.358e-6
Identity = 48/213 (22.54%), Postives = 83/213 (38.97%), Query Frame = 3
Query:  426 SETHCYCDDQCSLFGDCCHKHQQHHEPIASCHDGYYVIDKCLYKST--------------DGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEK-------HKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQKIYRNAYCF-LCN-TNSLQWSYK 995
            S+  C+CDD C  F DCCH +++     +       V D C ++ +              DG      +R S +  ++ +  +P           ++N FCAVC   ++  + R E          T++ + +         +Y+ P    R  H   I          L       P+ +VTEN   + K + ++Y F +C  TN +Q+ YK
Sbjct:   46 SQPKCFCDDMCVAFKDCCHDYEKKCGRPSVIESRESVEDICTFRRSHSTPYGFIFKRTCPDGTAHALSQRCSTVRDDDYMSSLPVIDVTSRTP--YRNLFCAVCRKADEISWWRAEAVCPNSTIDYTNMSKVRHFIASNCTMRYS-PSNAIRDLHPICI--------PPLTTPIIGTPSSHVTENVTEIIKEFCDSYAFPVCVITNGVQYMYK 247          
BLAST of G-protein coupled receptor vs. Ensembl Nematostella
Match: EDO41825 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3B6])

HSP 1 Score: 53.5286 bits (127), Expect = 2.555e-7
Identity = 43/167 (25.75%), Postives = 76/167 (45.51%), Query Frame = 3
Query: 1164 VLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDS--ENILNPSFGEIQCFINQLIGGLVWFFIP 1658
            ++T+    +SM++L+F+ +  G   + RN   KI + L  ++L   V  ++  V  N  +  C   +I  HF  L++F WM + A DV+++ T      N+  A+++S +                I  +C+   DS     L+   G   C+I+   G L  F IP
Sbjct:  605 IMTLAGSTISMLALIFLFVCHGYFPELRNFPGKIQINLAAALLMFHVFFLMVGV--NSVRGLCKVVAIGIHFFLLAAFLWMAVMAYDVHRTFT------NQEKAMVQSSRRLLKVYALVAWITPAAIVILCL-VIDSLLSGSLDYGTGAF-CYISSRWGLLFAFVIP 761          

HSP 2 Score: 53.1434 bits (126), Expect = 2.930e-7
Identity = 36/125 (28.80%), Postives = 57/125 (45.60%), Query Frame = 3
Query:  411 SRCVGSE----THCYCDDQCSLFGDCCHKH-----------QQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNN---LLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVE 731
            +RC  SE      CYCD  C+  GDCC+ +           ++   P   C +GYY+   C  ++TD  L  +C    E    N   LL ++P      N ++T+KN++CA C+   +  +   E
Sbjct:  217 NRCGASERTTQQKCYCDVICNEIGDCCYDYRSKCNITSTAPRRESTPKRQCSNGYYIARTCP-ENTDRYLDGQCTADGETPSTNDRDLLRNLPVLD--RNTNVTYKNSYCAKCHMATKLTYWTAE 338          
BLAST of G-protein coupled receptor vs. Ensembl Nematostella
Match: EDO31990 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWC9])

HSP 1 Score: 49.2914 bits (116), Expect = 4.550e-6
Identity = 54/221 (24.43%), Postives = 86/221 (38.91%), Query Frame = 3
Query:  426 SETHCYCDDQCSLFGDCCHKH----------QQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQ--FEFARVEKHKTSLKRKKDNTT-------EKSNYKYTFPKEFQRICHENVIITCD---------DDSEDALKLLCRN-----QPTFYVTENRGM-VQKIYRNAYCFLC-NTNSLQ 983
            S + CYCDD CS  GDCC+ +          ++      +C DG   I +C   +            +     NLL   P Y   + VS  ++N  CA+CN      F + +V   K S+     N T       +K  ++Y    + +++  ++   TC          D  +  +  LC        PT  +   RG+ + K  RN +C +C N  S Q
Sbjct:    5 SPSKCYCDDLCSSLGDCCYDYIPRCENATEWRKLGPGTRTCVDGVIAISRCPSLTIASKAVISGCHSASSQPENLLSGAPVYDYAQGVS--YRNLDCALCNNATNVTFWYLKVACPK-SVSTALGNMTALLIDVRDKCTWEYQVKNDMKKLTCQSPDDTCKRGLSGDSVIDRYQAIVHDLCHMYALPIYPTLMLHVGRGLQIFKPIRNPHCLVCLNITSPQ 222          
BLAST of G-protein coupled receptor vs. Ensembl Nematostella
Match: EDO37470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFI6])

HSP 1 Score: 49.2914 bits (116), Expect = 5.642e-6
Identity = 39/129 (30.23%), Postives = 58/129 (44.96%), Query Frame = 3
Query:  396 FQVDDSRCVGS----------ETHCYCDDQCSLFGDCCHKHQQ------HHEPIAS--CHDGYYVIDKCLYKSTDGNLKDKC-ERKSEI--SVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEF 719
            F++    C+G           ET CYCD  C   GDCCH +++        +P     C + Y V + C  K TD  L   C E   EI     +LL ++  + + +N+S  ++N FCA CNG     +
Sbjct:   34 FEIPSLTCLGRCEVHSERFQIETLCYCDSICLQIGDCCHDYRKVCKAKLSEKPQVKQVCSNHYIVTNSC-PKGTDQYLDGLCSETHGEILRRPYDLLRNLHVFDHDKNIS--YRNVFCARCNGARNTSY 159          
BLAST of G-protein coupled receptor vs. Planmine SMEST
Match: SMESG000067292.1 (SMESG000067292.1)

HSP 1 Score: 981.474 bits (2536), Expect = 0.000e+0
Identity = 548/551 (99.46%), Postives = 550/551 (99.82%), Query Frame = 3
Query:  369 AKSLESQASFQVDDSRCVGSETHCYCDDQCSLFGDCCHKHQQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEKHKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSYKYRLVVPTEIKALDFXXXXXXXXXXXXXXYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYGMDVHKTTTKYIRSITENISSFATRKQSNASI 2021
            AKSLESQASFQVDDSRCVGSETHCYCDDQCS+FGDCCHKHQQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEKHKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSYKYRLVVPTEIKALDFNEWCLNNCNELLKLYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKT +LIKSRKLKFYFLGGYGLPLLLTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPLCICLLTNIIICCVLYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIGGLLSSLQGLSLSLCFIYGMDVHKTTTKYIRSITENISSFATRKQSNASI
Sbjct:   13 AKSLESQASFQVDDSRCVGSETHCYCDDQCSMFGDCCHKHQQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEKHKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSYKYRLVVPTEIKALDFNEWCLNNCNELLKLYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTISLIKSRKLKFYFLGGYGLPLLLTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPLCICLLTNIIICCVLYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIGGLLSSLQGLSLSLCFIYGMDVHKTTTKYIRSITENISSFATRKQSNASI 563          
BLAST of G-protein coupled receptor vs. Planmine SMEST
Match: SMESG000033614.1 (SMESG000033614.1)

HSP 1 Score: 112.849 bits (281), Expect = 7.586e-26
Identity = 150/580 (25.86%), Postives = 256/580 (44.14%), Query Frame = 3
Query:  426 SETHCYCDDQCSLFGDCCHKHQQHHEP-----IASCH-------DGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEKHKTSLK-----RKKDNTTEKSNYKYTFP---KEFQRICHENVIITCDDDSEDALKLL---CRNQPTFYVTENRGMVQKIYRNAYCFLC-NTNSLQWSYKYRLVVPTEIKALDFXXXXXXXXXXXXXXYQINQTTFRNHSDSISCTENKNFQ------------------FFEKVL---TVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISV-----LSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSEN-ILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYGMDVHKTTTKYIRSITENISSFATRKQSN 2012
            S+  C+ D QC L+GDCC+ HQ H +P     + SC           ++I+KC  K+ +  L D C +K       L   +P   N +   + + N FCA CN +  F +  V+ +   L+            +  N+   FP   +  QR C   +I  C +      K +   C N    Y       +QK Y+N +C  C N N        R  +P  I+   F+             Y +N   +    +  +  E KNF                     E V+   +  F  +S++SL F+++++      +N    +T+ L+I +     +SL VTN    +V++ S   C Y +I +HF  LS+F WM ++ALD+ ++  +    INK       +    YF+  + +   +   +V I+ FD  N  L P +G   C+     GGL+W+FIP+C+ LL NII C  ++  ++K  ++   + +  N       LC++L+ +FG  ++   + +F    IL  +G +++ LQG  L+LCF+    V       + +ITE+IS  +T  + +
Sbjct:   22 SDRICHSDPQCPLYGDCCYGHQDHGKPGLLKDVLSCKPYNKLFPSAMWLINKC--KNLNHPLSDFCTKKIFYPKAPLKSWIPVISNRK---IIYDNLFCAKCNEEIDFTYLPVKVNCGPLEIYDYASANQAVIDNPNHCEIFPYFNRTLQRSCEGEIITNCTNTKLIQNKFVIDKCENGEKDYFVFR---LQK-YKNVFCCKCWNKNCFG-----RRKLP-NIRNSPFS-------------YLLNFNDWEKQENKETVKE-KNFTQENNSSNNTNSTLDYSTGMGETVIYHISFAFTCLSLVSLFFLIILYLTHQVFKNLGGYLTICLSICLWLINFMSLLVTNT--QIVKSAS---CKYLAIFHHFVALSTFVWMAVYALDLLQTFGTKSASINKNRGW---KTFCIYFICVFAVSGCVVGISVIIEYFDKTNSTLRPQYGGPHCWFTSKFGGLIWYFIPVCLLLLWNIITCGFVFYQLFKTAKECRIINN--NDLNSTLWLCMRLTAVFGVGYVLQIIAIFTQLNILISLGSMVNCLQGFMLTLCFVCTKRVRSQLRNRLLTITESISKSSTANRPS 562          
BLAST of G-protein coupled receptor vs. Planmine SMEST
Match: SMESG000033611.1 (SMESG000033611.1)

HSP 1 Score: 108.612 bits (270), Expect = 2.083e-24
Identity = 142/583 (24.36%), Postives = 265/583 (45.45%), Query Frame = 3
Query:  414 RCVGSETHCYCDDQCSLFGDCCHKHQQHHEPIA------------SCHDGYYVIDKCLYKSTDGNLKDKCERK----SEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVE------------KHKTSLKRKKDNTTEKSNYKYTFPKEFQRICHENVIITCDDDSEDALKLL---CRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSY---KYRLVVPTEIKALDFXXXXXXXXXXXXXXYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPS---KRFCLYFSIAYHFCFLSSFFWMTIFALDVY-----KSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQ--QTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYG-------MDVHKTTTKYIRSITENISSFATRKQS 2009
            +C  +  +C CDD+C+L+GDCC  H+  ++  +            S  +  YV+DKC  K+   ++  K  RK    S+I V + +  +   G      + F+N+FCA CN ++ + +  +                 ++ + +D+   +   +       +RIC   +I  C +  ED  + +   C N P  +  E  G +  +YRN +C  C      W     + +++ PT I  +    + LN  + +    ++ +   +N+++     ++KN ++F   ++ TF  +SMISL  +++++       N    +T+ L+I    L + N    +V++P+     FC Y  I  HF  + +F WM I+ALD+      KS  S + +  KTF         +  +G     L++T++ V     ++   + P++G   C+    +GG VW+FIP+CI LL N   C +++  I K ++  Q V    S ++      LCI+L+ +FG  ++   + +  +   L   G  ++ LQG  L+ CFI+        +DV  + T       EN+  + T  +S
Sbjct:   21 KCEKNSEYCNCDDKCTLYGDCCSGHESFNKTGSLRNILKCKLFKPSVAESIYVVDKC--KNNTKHILSKLCRKEVIFSKIPVKSFIPVINENG------VIFENSFCAKCNNEDLYSYLNISISCPDVNITDIYDANQAIAKSRDSCEIQPEIE----SNIKRICKTKLIDFCSNSFEDIGENITGKCTNGPESF--EVHGEI--LYRNTFCCKC------WKIHCRRLQVMKPTSILDMSTFSYLLNFNDWVESEDEVYKPE-QNNTEFDEIIKSKNLKYFVYYISFTFTCLSMISLTVLIVLYITQKVFHNFGGYLTICLSIC---LWLINFCTLLVQSPNIVNSSFCQYLGIFQHFITICNFIWMAIYALDLLQTFGVKSFNSSKKKTWKTFCF-------YCLVGFSCSGLIVTLSTVLEFTLETNCTIRPNYGGTHCWFTNKLGGTVWYFIPICILLLWNFGACILVFYRIIKTSKECQLVSNDQSYSI----LWLCIRLTSVFGFGYIFQIIAILTHFQPLIVFGSFVNCLQGCLLACCFIWTKRVRIIFVDVLTSFTDIFSKSNENVDKYKTTNKS 566          
BLAST of G-protein coupled receptor vs. Planmine SMEST
Match: SMESG000033610.1 (SMESG000033610.1)

HSP 1 Score: 75.485 bits (184), Expect = 5.540e-14
Identity = 127/544 (23.35%), Postives = 226/544 (41.54%), Query Frame = 3
Query:  417 CVGSETHCYCDDQCSLFGDCCHKHQQHH-----EPIASC-------HDGYYVIDKCL----YKS---TDGNLKDKCERKSEISVNNLLYHVPTYGNYENVSLTFKNAFCAVCNGKNQFEFARVE----KHKTSLKRKKDNTTEKSNYKYT----FPKEFQRICHENVIITCDDDSE---DALKLLCRNQPTFYVTENRGMVQKIYRNAYCFLCNTNSLQWSYKYRLVVPTEIKALDFXXXXXXXXXXXXXXYQINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSEN--ILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYGMDVHKTTT 1952
            C  S+ +C CD  C  FGDCC  H++       E I+SC       ++   VI+KC+    Y S   T   +  K   KS  +V             EN  L ++N +CA CN   ++++  +      H  +  ++ +    KS Y  +       E QR C  N+   C +      D +  +C N     V++ R      YRN +C  C+  ++    +  L +     A  F+       NE+     + Q+   N   + +  E   ++ F+K  T  F  +SM+ L  ++L++   +  RN    +T+ L+  +      N++    +      C Y  I+  F  L  F WM +++LD+ ++       I K     K+ K   ++       + + + +  I +F   N     P +G   C+   +  GL+W+FIP+C+ LL N + C +++  I K +++   V            LC++L+ +FG  ++     +     IL  I  + +SLQG  L +CF +   V    T
Sbjct:   20 CRKSDQYCQCDKICVQFGDCCPGHEKFQQTGSLESISSCKVFAKNSYENMRVINKCVNDNHYYSKYCTKELMDPKLPIKSFAAVMG-----------EN-KLIYENYYCARCNNIKRYQYFSLSVSCFGHNITNFKQVNEIMIKSPYSCSILPLIDSELQRTCFINLTRLCQEPLSKRFDNVSDMCLNGKLDIVSDGRNF----YRNDHC--CSCRNISCFKQIPLALDVASSAFSFSLNFAAWENEVQTK-PVPQSNLTNKYFTHNVYE-IIYKIFDKT-TEVFTFLSMVCLFILILLYTTQSMFRNFGGYLTVCLSTCLWLSNFFNLLVFYKDFEKSFACTYIGISQQFFNLGMFVWMAVYSLDLLQTFGFRSTNIGKK----KTLKSFCFYCITGFSCVAINVGSAIIVEFTLPNNSTFRPKYGGRYCWFTNIPSGLIWYFIPVCLLLLWNSVTCVIVFYRIIKTSKECRVVQKK--ESNSTLWLCVRLTTVFGLGYVLQIFAILSKVDILVRILVVFNSLQGCFLMICFFWAKRVRAILT 536          
BLAST of G-protein coupled receptor vs. Planmine SMEST
Match: SMESG000033615.1 (SMESG000033615.1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.940e-13
Identity = 80/286 (27.97%), Postives = 145/286 (50.70%), Query Frame = 3
Query: 1167 LTVTFRIVSMISLLFMVLVFGCTNDHRNQASKITLFLTISV-----LSLCVTNIIFSVVENPSKRFCLYFSIAYHFCFLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRXXXXXXXXXXXXXXXXTITAVCIQKFDSEN-ILNPSFGEIQCFINQLIGGLVWFFIPXXXXXXXXXXXXXXXYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAFVGVFFNNYILKFIXXXXXXXXXXXXXXCFIYGMDVHKTTTKYIRSITENISSFATRKQ 2006
            ++  F  +S++SL F+++++      +N    +T+ L+I +     +SL VTN    +VE+ S   C Y +I +HF  LS+F WM ++ALD+ ++  +  +  NK   L   +    Y L G+     +   +V  + FD  N  L P +G   C+     GGL+++FIP+C+ LL N I+C  ++  ++K  ++   V            LC++L+ +FG  ++     +F    IL  +G +++ LQG  L+LCF+            + +ITE+IS  +T  +
Sbjct:  128 ISFAFTCLSLVSLFFLIILYLTHQVFKNFGGYLTICLSICLWLINFMSLLVTNT--QIVESAS---CKYLAIFHHFVALSTFVWMAVYALDLLQTFGTKLVNANKKRGL---KSFSVYCLIGFSTSGSVVGISVITEYFDKTNSTLRPQYGGPYCWFTSKFGGLIYYFIPVCLLLLWNFIMCSFVFYQLFKTAKECRIVKK--KDANSTLWLCMRLTAVFGVGYVLQIFAIFTQLEILISLGSMVNCLQGFMLTLCFVCTKRARSLLRNRLLTITESISKSSTANK 403          
The following BLAST results are available for this feature:
BLAST of G-protein coupled receptor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
R7UAT51.251e-1323.04G_PROTEIN_RECEP_F2_4 domain-containing protein OS=... [more]
A0A4D5RNS51.299e-1120.82Putative g protein-coupled receptor OS=Ixodes scap... [more]
A0A147BLH75.090e-1124.90Putative g protein-coupled receptor OS=Ixodes rici... [more]
B7QM221.113e-1024.147 transmembrane receptor (Secretin family) superfa... [more]
A0A3S3P2X51.332e-925.93G_PROTEIN_RECEP_F2_4 domain-containing protein (Fr... [more]
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BLAST of G-protein coupled receptor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO344202.741e-924.44Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO418252.555e-725.75Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO319904.550e-624.43Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO374705.642e-630.23Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of G-protein coupled receptor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G-protein coupled receptor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000067292.10.000e+099.46SMESG000067292.1[more]
SMESG000033614.17.586e-2625.86SMESG000033614.1[more]
SMESG000033611.12.083e-2424.36SMESG000033611.1[more]
SMESG000033610.15.540e-1423.35SMESG000033610.1[more]
SMESG000033615.18.940e-1327.97SMESG000033615.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30005929 ID=SMED30005929|Name=G-protein coupled receptor|organism=Schmidtea mediterranea sexual|type=transcript|length=2085bp
TTAAAACAAAATTAGCCTAGTGATCATGGGACGCCTTGCATGTGAAACTC
ATACCATTATTGTTTATCCCAACGGATAAAACAATATTTAATTAATTTTA
GAAAATGTTTACCCATTAAATCCCAAATTCATAAAAGTCATTTGCCAACG
GAAACCCAAATTATTCCAACGACAACCATTAGTTAATGTATAACTAATTT
ACGTGCTTTGACGGCACCCAAACTTTCGATTCGGAAATCGGAAACACGTT
GACACTTTGGAACCTATAAAAAGAATAAAATTTATCCTACATTCATTCCT
AGCGCAACTTAGATATTAATTTTGAAATCTGAATGTTATTTTTAAAATTT
CTCCTCATTTTCTTTTTGGCAAAGAGTTTGGAATCCCAAGCTTCCTTCCA
AGTCGACGACAGTCGATGTGTTGGATCAGAAACGCATTGCTATTGCGATG
ACCAATGCTCATTGTTCGGAGACTGTTGCCACAAACATCAACAACACCAT
GAGCCGATTGCGTCTTGCCACGATGGCTATTATGTCATAGACAAATGTTT
ATACAAGTCAACGGATGGGAATTTAAAGGACAAATGCGAAAGAAAATCGG
AAATTAGTGTCAATAATCTGCTTTACCACGTGCCAACCTACGGCAATTAC
GAAAACGTGAGTCTTACGTTTAAAAACGCATTCTGTGCCGTTTGCAACGG
AAAGAACCAATTCGAGTTTGCTAGGGTTGAAAAGCATAAAACTTCATTGA
AAAGAAAAAAAGACAATACGACCGAGAAATCAAATTATAAATATACGTTT
CCGAAAGAATTCCAAAGAATTTGCCATGAAAATGTCATAATCACCTGTGA
TGACGATTCGGAGGACGCACTGAAGCTTTTATGTCGAAATCAACCGACTT
TCTACGTAACTGAAAATCGAGGAATGGTACAAAAGATTTATAGAAATGCT
TACTGCTTCCTTTGTAATACCAATTCCTTGCAATGGTCATATAAATACCG
TTTAGTCGTTCCAACTGAAATAAAAGCCCTTGATTTCAATGAATGGTGCC
TCAATAATTGCAATGAACTCCTAAAATTATATCAAATAAATCAAACAACA
TTCAGGAACCATTCAGATTCGATTTCATGCACTGAAAACAAGAATTTTCA
ATTTTTCGAAAAAGTCCTGACAGTTACCTTTAGAATAGTCTCAATGATTT
CCTTGCTTTTCATGGTTCTCGTATTCGGATGCACGAACGACCACCGAAAC
CAAGCGAGCAAAATAACATTGTTTCTAACTATATCCGTCCTGTCTTTGTG
CGTCACCAATATAATTTTTTCTGTTGTTGAAAACCCATCAAAAAGATTTT
GTCTCTATTTTTCCATCGCGTATCACTTTTGTTTTCTCAGTTCATTTTTC
TGGATGACAATCTTTGCCCTCGACGTTTACAAATCCATCACTTCACCGCG
CCTGAGGATTAATAAAACTTTTGCATTAATCAAAAGTAGGAAACTGAAAT
TTTATTTCCTCGGCGGGTATGGTCTACCTCTGCTACTGACAATAACGGCA
GTTTGTATACAAAAGTTTGATTCAGAGAACATACTGAATCCTTCTTTTGG
AGAAATTCAATGCTTTATTAATCAACTAATTGGGGGTCTGGTTTGGTTTT
TTATTCCTCTTTGTATTTGCCTGTTGACAAACATTATCATATGCTGTGTT
TTATACAGATTCATTTATAAGATTAATCAACAAACTGTTGAGGTGGGACA
TTCTTTAAATGTTGAAAAAAAGAATTTTATACTCTGTATCAAACTGTCTA
TATTATTTGGAGCAACATGGCTGCCTGCATTCGTGGGGGTGTTTTTTAAC
AATTACATTTTAAAGTTTATTGGAGGGTTATTGAGCAGCCTTCAAGGTCT
CTCGTTGTCACTGTGTTTTATTTATGGCATGGATGTACATAAGACCACCA
CTAAATACATCAGAAGCATTACAGAAAACATTTCATCTTTTGCCACCCGA
AAGCAATCAAATGCATCCATCTGAAAAATTTAAAATATGACTCTAATTAT
TTGTAGAAATCAGTGTTAGAATGTCTTGTGTACCC
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protein sequence of SMED30005929-orf-1

>SMED30005929-orf-1 ID=SMED30005929-orf-1|Name=SMED30005929-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=564bp
MLFLKFLLIFFLAKSLESQASFQVDDSRCVGSETHCYCDDQCSLFGDCCH
KHQQHHEPIASCHDGYYVIDKCLYKSTDGNLKDKCERKSEISVNNLLYHV
PTYGNYENVSLTFKNAFCAVCNGKNQFEFARVEKHKTSLKRKKDNTTEKS
NYKYTFPKEFQRICHENVIITCDDDSEDALKLLCRNQPTFYVTENRGMVQ
KIYRNAYCFLCNTNSLQWSYKYRLVVPTEIKALDFNEWCLNNCNELLKLY
QINQTTFRNHSDSISCTENKNFQFFEKVLTVTFRIVSMISLLFMVLVFGC
TNDHRNQASKITLFLTISVLSLCVTNIIFSVVENPSKRFCLYFSIAYHFC
FLSSFFWMTIFALDVYKSITSPRLRINKTFALIKSRKLKFYFLGGYGLPL
LLTITAVCIQKFDSENILNPSFGEIQCFINQLIGGLVWFFIPLCICLLTN
IIICCVLYRFIYKINQQTVEVGHSLNVEKKNFILCIKLSILFGATWLPAF
VGVFFNNYILKFIGGLLSSLQGLSLSLCFIYGMDVHKTTTKYIRSITENI
SSFATRKQSNASI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: biological process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO:0006950response to stress
Vocabulary: cellular component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: molecular function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 278..523
e-value: 1.0E-13
score: 51.2
NoneNo IPR availableGENE3DG3DSA:1.20.1070.10coord: 265..532
e-value: 3.4E-33
score: 117.0
NoneNo IPR availablePANTHERPTHR45902FAMILY NOT NAMEDcoord: 259..551
NoneNo IPR availablePANTHERPTHR45902:SF1coord: 259..551
NoneNo IPR availablePANTHERPTHR45902FAMILY NOT NAMEDcoord: 27..217
NoneNo IPR availablePANTHERPTHR45902:SF1coord: 27..217
NoneNo IPR availableCDDcd150397tmB3_Methuselah-likecoord: 274..506
e-value: 1.8488E-34
score: 129.266
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.827
NoneNo IPR availableSUPERFAMILYSSF81321Family A G protein-coupled receptor-likecoord: 253..521
NoneNo IPR availableTMHMMTMhelixcoord: 439..461
NoneNo IPR availableTMHMMTMhelixcoord: 509..531
NoneNo IPR availableTMHMMTMhelixcoord: 345..367
NoneNo IPR availableTMHMMTMhelixcoord: 482..504
NoneNo IPR availableTMHMMTMhelixcoord: 280..299
NoneNo IPR availableTMHMMTMhelixcoord: 388..410
NoneNo IPR availableTMHMMTMhelixcoord: 311..330
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 276..533
score: 16.99