SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005925 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Match: SMARCAD1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 286/620 (46.13%), Postives = 415/620 (66.94%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL + +++ +L+ I CS+ KA +I + RP+ + + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G GPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++R+ I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F KS +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ Sbjct: 389 ILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNI--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Match: SMARCAD1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]) HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0 Identity = 287/622 (46.14%), Postives = 416/622 (66.88%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL + +++ +L+ I CS+ KA +I + RP+ + + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G GPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++R+ I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F KS +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ K + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ Sbjct: 389 ILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNI--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 1001
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Match: SMARCAD1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]) HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0 Identity = 287/622 (46.14%), Postives = 416/622 (66.88%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL + +++ +L+ I CS+ KA +I + RP+ + + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G GPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++R+ I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F KS +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ K + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ Sbjct: 389 ILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNI--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 1001
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Match: SMARCAD1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]) HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0 Identity = 274/576 (47.57%), Postives = 391/576 (67.88%), Query Frame = 2 Query: 431 KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G GPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++R+ I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F KS +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ Sbjct: 3 KTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTML------TGNGGGWNI--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 569
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Match: HELLS (helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]) HSP 1 Score: 301.212 bits (770), Expect = 8.167e-91 Identity = 181/538 (33.64%), Postives = 298/538 (55.39%), Query Frame = 2 Query: 617 QPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIF--LTENEGLKKIFQMSQKST-LKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER-----MKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISH-DMLLDEDHITSNTELIFE---DLSYMHDFEIHQNCLKYPHAV--------GKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQI 2158 QP + + ++ YQ+ G+ WLR++ E +NGILADEMGLGKTVQ IA ++ ++ G+ GP ++ P STL NW E ++ ++ ++Y+G Q+ER+++ I + V++T++ I++ DR ++ + Y + DE H +KNM + L F KLLLTGTPLQNN+ EL SLL+F++P++F L E I +S+ + + + + + ++L PF LRRLKS V ++P K + PLS+ Q I Y + R + + + + RK N+S + D + + + + IS +D + + E +L + + + C +P+ + ++K+ EEL+ S K LD LP + G K+L+FSQ +LDI+ ++ + + RLDGS S +R+ + FN D ++ +F+++TRAGGLGINLT+A+ VII+D D+NP +D QA+DR HR+GQ + V V +L++ TID+ I+ A K KLE++ Sbjct: 76 QPKHFTGGV-MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAM---RDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKI--DDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKL 607
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Match: M03C11.8 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDG2]) HSP 1 Score: 459.144 bits (1180), Expect = 3.400e-148 Identity = 258/628 (41.08%), Postives = 385/628 (61.31%), Query Frame = 2 Query: 320 DYFNKSTVDDLSQITGCSEIKALRIMKDRPYK----TIDDLKANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIA-QSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQK-----STLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQD--DAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDED-HITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE-QIT 2161 ++FNK+ +DL Q ++ A ++ +RP++ + +K I+ +E L + L +L C + +V D TE + Q + L YQLIG+ WL +++ ++LN IL DEMGLGKT+Q +AFLSYL G GPH+IVVP+ST+ NW E HKWC +++++ YYG+QDER+ +R+R+ Q D +V+LTTYN+ S +D+ F K Y ++DE HMLKN S RY+ L K K+K+LLTGTPLQNN++ELISL+ FV+ +F E + + Q ++ T ++ + D+I + K +L P+ LRRLK+QVL +P K+ +I + + + Q LY +E ++ ++ D++G ++M LR+ +NH LL R YTD L KI+ + L E + + + EDL+++ D +IHQ C ++ K+ L E+L LKS K + LD LP + GDK+LIFSQF +LDI+E +L + +Y RLDG T DRQ+ I++FN D+ VF+L+TRAGGLGINLTSAN +II DID+NPYND+QAEDR HR+GQ + V V +L+SKGT++ +L +A +KL+LE Q+T Sbjct: 294 EFFNKAKKEDLLQQARINDKIADFVLANRPFEIYGAMVAKMKGVTRGTNAIEAYMEFLEKRGILSRILDDCKDHAH-----------TVTKDFERCTEGPL--QLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYG------SLMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERF-RCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVT 901
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Match: swsn-4 (SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF53]) HSP 1 Score: 329.331 bits (843), Expect = 8.397e-97 Identity = 192/520 (36.92%), Postives = 304/520 (58.46%), Query Frame = 2 Query: 632 NPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSN--FKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE----ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +P+L LK YQ+ G+ W+ ++ NLNGILADEMGLGKT+QTI+ ++YL++ GP++++VP STL+NW+ E KW ++ I+Y G +D RRR+ +I + +FNVL+TTY I K + K+ + Y + DE H LKN + + + N F + +LLLTGTPLQN + EL +LL+F++P+IF + ++ F +T ++ N ++ I ++ ++L PF LRRLK +V SQ+P KT + S Q ++YR + + + G + ++TV+ LRKL NH L + I +C Y +K+ E +L+ + K++ LD LP G +IL+F Q +++I E+FL +++ TYLRLDGST D+R D + QFN + D+ +F+L+TRAGGLG+NL +A+ VIIFD D+NP+ D QA+DR+HR+GQ ++V+V++LI+ +++E IL A KL +++ Sbjct: 528 DPNLLLKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQIRKG-AFNVLMTTYEYVIKEK---ALLGKIRWKYMIIDEGHRLKN-HNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIF-SSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGARSLMNTVVHLRKLCNHPFLFPN---------------------------------------IEDSCRAY------WKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDE 996
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Match: pqn-15 (Prion-like-(Q/N-rich)-domain-bearing protein [Source:UniProtKB/TrEMBL;Acc:P91094]) HSP 1 Score: 311.612 bits (797), Expect = 3.489e-90 Identity = 191/520 (36.73%), Postives = 293/520 (56.35%), Query Frame = 2 Query: 632 NPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNC-----LKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 NPSL LK YQ+ G+ W+ + NLNGILADEMGLGKT+QTIAF++YL++ GP +++VP ST+ NW+ E KW N+ +I Y G + E R++ I +S FNVLLTT+ I K + KL + Y + DE H LKN + L + F+ +R+LL+TGTPLQN + EL +LL+F++P+IF + ++ F +T ++ ++ I ++ ++L PF LRRLK +V S++P K + +S Q +LY+ + + G K +T++ LRKL NH L FE+ + ++C ++ AV Y++ S K++ L LP G ++L+F Q ++ IVE+FL I YLRLDGST D+R +D+FN + + +F+L+TRAGGLG+NL +A+ VIIFD D+NP+ D QA+DR+HR+GQ +V+V +LI+ +++E IL A KL +++ Sbjct: 1196 NPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPK-ETRKVFEPIIKSGKFNVLLTTFEYVIREK---ALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIF-SSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQKGLLLDGKTNTGSKSLRNTMIHLRKLCNHPFL-------------------------------FEN--------VEESCRNFWDARFISAVDLYRV-------SGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDE 1664
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Match: isw-1 (Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]) HSP 1 Score: 300.056 bits (767), Expect = 2.587e-88 Identity = 190/526 (36.12%), Postives = 291/526 (55.32%), Query Frame = 2 Query: 605 LILDQ-PHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKG-PHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQV-LSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +I D+ P YI + ++ YQ+ G+NWL + +NGILADEMGLGKT+QTI+ + Y+ K PH+++VP STL NW E KWC ++ +V G++ R ++ + F+V TTY + + K +KKL++ Y + DEAH +KN S + + + +LL+TGTPLQNN+ EL +LL+F++P+IF T ++ F S N D + ++ ++L PF LRR+KS V S +P K ++ + LS+ Q Y + + + + + A V+ A ++ +M LRK NH L F+ F Q+ L+ S K+ LD+ L F E G ++LIFSQF +LD++E+F ++ Y RLDGST +DR + I+ +N D K +F+LTTRAGGLGINL +A+VVII+D D+NP +D QA DR+HR+GQ + V+V +LI++ T+DE I+ A KL+L+ I + Sbjct: 118 VIFDKSPFYIE-NGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQ---LKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIF-TSSDDFDSWFSNDAMSG------NTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKV-YVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYL-------------------------------FDGAEPGPPFTTDQH----------------LVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVI 584
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Match: chd-1 (Chromodomain and Helicase Domain protein [Source:UniProtKB/TrEMBL;Acc:O17909]) HSP 1 Score: 297.36 bits (760), Expect = 1.278e-85 Identity = 184/517 (35.59%), Postives = 285/517 (55.13%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDS-GLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGN---QDERRRMRYRIAQSDSF--NVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALST----VMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 L+ YQL G+NW+ + + ILADEMGLGKT+Q+I+ L+ L L GP+++VVP ST+ W++E +W + ++VY G+ +D R+ + + + N +LTTY I + +D+ F+ +D+ + DEAH LKN S+ YK L+ F+ KLL+TGTPLQN++ EL +LL F+MP F E F+ + + N IS + + L PF LRR+K V +P KT +I + ++ Q Y+ + KN ++ + GVK +++ VMEL+K NH+ L R + DHI Y A G+ ++LL S K+ LD+ L + G ++LIFSQ +M+LDI++E+L+ ++ RLDGS D R+ +D +N F+L+TRAGGLGINL +A+ VIIFD D+NP ND QA R+HR+GQ + V + +L++KG+++E I+ A KL L+ + + Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILL---KDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEE-----FETAHNES------NHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWIL--TKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQY-----------------DHI-------------------------YDDAQGRL---QQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVI 860
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Match: Etl1 (gene:FBgn0032157 transcript:FBtr0079901) HSP 1 Score: 506.908 bits (1304), Expect = 4.694e-168 Identity = 269/638 (42.16%), Postives = 399/638 (62.54%), Query Frame = 2 Query: 278 EESNSMKLDEINILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKAN----KISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGL-KGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSD--SFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQ---SSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDD--AFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 E S M + + N++++ +L + SE KAL I+ RP+ DL+ ++S L++ E++ + + +L KC N++ R+ + ++ I++QP ++ L L YQ+IG+NWL ++H++ +NGILADEMGLGKT+Q IAFL+YL ++GL + H+IVVP+STL+NWE E+ +WC L V Y+G+QDERRRMR R A+ F+VLLTTY+I S+ E+R + Y +FDEAHMLKNM + RY L + ++LLTGTPLQNN++ELISLL FVMP F E +K +F KS Q S F + +I + K ++ PF LRRLK VL +P K + + +P+S Q I Y + ++ N + + + + ++ +ME+R+++NH LL+R ++TD+ LR S + +N + IFE+L+ M DF+++Q K H K+P+ L+ S K YLD LP G ++L+FSQF M+LDIVEE+L+ ++ + RLDG+T+ + RQD I FN DD I VF+L+T+AGG+GINLT+A+ +I DID+NPYND+QAEDR HR+GQ R V + +LIS+ TI+E IL A EKLKLE+ Sbjct: 175 EMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKC----NNMVSRL---------EKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNK--HEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEK 797
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087841) HSP 1 Score: 309.686 bits (792), Expect = 1.548e-91 Identity = 190/520 (36.54%), Postives = 286/520 (55.00%), Query Frame = 2 Query: 620 PHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGV-KYALSTV-MELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 P YI S ++ YQ+ G+NW+ ++E +NGILADEMGLGKT+QTI+ L YL GPHI++VP STL NW E KWC +L+ + G+QD R + ++V +T+Y + I K KK ++ Y V DEAH +KN S + L FK +LL+TGTPLQNN+ EL +LL+F++P++F +E + F + + DD I+++ +L PF LRRLK++V ++ K + LS+ Q Y + + + + + A V K L + M+LRK +NH L D T++T L++ S K+ LD+ LP E G ++LIFSQ +LDI+E++ ++ Y RLDG T +DR I +FN D+ K +F+L+TRAGGLGINL +A+VVII+D D+NP D QA DR+HR+GQ + V+V +LI++ T++E I+ A KL+L+++ + Sbjct: 120 PAYIK-SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVF-NSSEDFDEWFNTN-------TCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLF--------------DGAEPGPPYTTDTHLVY---------------------------------NSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVI 580
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087842) HSP 1 Score: 309.686 bits (792), Expect = 1.548e-91 Identity = 190/520 (36.54%), Postives = 286/520 (55.00%), Query Frame = 2 Query: 620 PHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGV-KYALSTV-MELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 P YI S ++ YQ+ G+NW+ ++E +NGILADEMGLGKT+QTI+ L YL GPHI++VP STL NW E KWC +L+ + G+QD R + ++V +T+Y + I K KK ++ Y V DEAH +KN S + L FK +LL+TGTPLQNN+ EL +LL+F++P++F +E + F + + DD I+++ +L PF LRRLK++V ++ K + LS+ Q Y + + + + + A V K L + M+LRK +NH L D T++T L++ S K+ LD+ LP E G ++LIFSQ +LDI+E++ ++ Y RLDG T +DR I +FN D+ K +F+L+TRAGGLGINL +A+VVII+D D+NP D QA DR+HR+GQ + V+V +LI++ T++E I+ A KL+L+++ + Sbjct: 120 PAYIK-SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVF-NSSEDFDEWFNTN-------TCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLF--------------DGAEPGPPYTTDTHLVY---------------------------------NSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVI 580
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087843) HSP 1 Score: 309.686 bits (792), Expect = 1.548e-91 Identity = 190/520 (36.54%), Postives = 286/520 (55.00%), Query Frame = 2 Query: 620 PHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGV-KYALSTV-MELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 P YI S ++ YQ+ G+NW+ ++E +NGILADEMGLGKT+QTI+ L YL GPHI++VP STL NW E KWC +L+ + G+QD R + ++V +T+Y + I K KK ++ Y V DEAH +KN S + L FK +LL+TGTPLQNN+ EL +LL+F++P++F +E + F + + DD I+++ +L PF LRRLK++V ++ K + LS+ Q Y + + + + + A V K L + M+LRK +NH L D T++T L++ S K+ LD+ LP E G ++LIFSQ +LDI+E++ ++ Y RLDG T +DR I +FN D+ K +F+L+TRAGGLGINL +A+VVII+D D+NP D QA DR+HR+GQ + V+V +LI++ T++E I+ A KL+L+++ + Sbjct: 120 PAYIK-SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVF-NSSEDFDEWFNTN-------TCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLF--------------DGAEPGPPYTTDTHLVY---------------------------------NSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVI 580
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Match: brm (gene:FBgn0000212 transcript:FBtr0075524) HSP 1 Score: 301.212 bits (770), Expect = 1.150e-86 Identity = 182/517 (35.20%), Postives = 294/517 (56.87%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKR-KLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-------LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQ+ G+ WL ++ NLNGILADEMGLGKT+QTI+ ++YL+D + GP++I+VP STL NW E KW + V+ Y G+ RR ++ ++ ++ FNVLLTTY I +D+ + K+ + Y + DE H +KN + L+ I +LLLTGTPLQN + EL +LL+F++P+IF + + ++ F +T ++ N+++ I ++ ++L PF LRRLK +V Q+P K I +S Q +LY+ + D + K+ ++T+++LRKL NH + + H + DH + + DL Y++ S K + LD LP ++L+F Q + I+E++L ++Q YLRLDG+T +DR + + +FN + D+ VF+L+TRAGGLG+NL +A+ V+IFD D+NP+ D QA+DR+HR+GQ +V+V++L++ +++E IL A KL +++ Sbjct: 769 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQM-RATKFNVLLTTYEYVI---KDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCST-FEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQ-HIEEKYC-----------DHTGGHGVVSGPDL---------------------YRV-------SGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDE 1240
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Match: smarcad1b (Danio rerio SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 b (smarcad1b), mRNA. [Source:RefSeq mRNA;Acc:NM_001353868]) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 296/621 (47.67%), Postives = 419/621 (67.47%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL +F ++VD+L+ I GCS KA +I + RP+KT DL + N +S +L+ GC E+L ++ + L+ KC +IS L++ + ++ D G+ + QP ++ + LK YQLIG+NWL ++H+ L+GILADEMGLGKT+Q I+FL++L G GPH+I VP STL+NW REL+ WC + KV+VYYG+ D+R+ MRY I Q +N++++TYN++I + DR KL Y VFDE H+LKNM S+RY++L K +LLLTGTPLQNN++EL+SLL+F+MPN+F + + K+F M KS+ +QSSF D+I+ K ++ PF LRR+KS+VL Q+P K ++ +SE Q LY + ++K+ + G K L+ VM +LRK+SNH LL R YT L+ +S ML + H ++ LI ED+ + DFE+H+ C +Y A+ +Y+L ++LL S K+ L + L E GD++++FSQF M+LDI+E FL++ + Y RLDGST DR IDQFN D DI VF+L+TRAGGLGINLTSANVVI+ DID NPYND+QAE R HR+GQ + VKVIKLISK +I++ +LRI KLKLEQ Sbjct: 322 ILCFFQSASVDELTLIAGCSLKKAQKITELRPFKTWKDLDDAMRRRNGLSAELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQVM-----DKGPGS----MTQPEILSSTFQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGNHGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSM--KSSEEQSSFERDRITHAKLIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSN---GEKRELTNVMMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHRLCQQY-SALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQ 927
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Match: smarcad1a (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 a [Source:NCBI gene;Acc:557875]) HSP 1 Score: 540.036 bits (1390), Expect = 3.434e-179 Identity = 280/621 (45.09%), Postives = 421/621 (67.79%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKA-----NKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQS-DSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 I+ + +++D+L+ I+GCS KA +I+ RP+ T D+K N +S L+ GC +L +Q +++L+ +C +I+ + + + + I++ +G+ + QP +N +L L++YQLIG+ WL ++H+ L+GILADEMGLGKT+Q IAFL++L + G+KGPH+I VP+STL+NW REL WC +LKV++YYG+ ++R+ +R I FN++++TYN++I + DR +KL Y VFDE HMLKNM S+RY++L + +LLLTGTPLQNN++EL+SLL+F+MP++F + + K+F S +S+ ++SSF+ D+I+Q + ++ PF LRR+KS+VL ++P K +I + P+S+AQ LY +R+K + G K L VM +LRK++NH LL R +YT L +S ML + H ++ LI ED+ M DFE+H C +Y G ++L + L+L S K L + L E GD++++FSQF M+LDIVE LK+ Y+RLDGST +R ID++N + +I VF+L+TRAGG GINL SAN VI+ DID NP+ND+QAEDR HR+GQ R V+VIKLISK +I++C+LR+ EKLKLEQ Sbjct: 341 IIQFLQDASLDELALISGCSIKKAQKIISLRPFNTWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVLDLMGRCEKIAQKMTKDVTQV-----IEAGMGS----IKQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMF--STRSSEEESSFHKDRIAQARLIMKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKRLKKTPN---GDKRELCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHYDADPALIQEDMEVMSDFELHNLCREYSSISG-FQLEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLEQ 946
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Match: hells (helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]) HSP 1 Score: 305.449 bits (781), Expect = 3.320e-91 Identity = 191/565 (33.81%), Postives = 313/565 (55.40%), Query Frame = 2 Query: 572 VDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILY----RQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSI------LRKISHDMLLDEDHITSNTELI--FEDLSYMHDFEI------------HQNCLKYP--HAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +D + ++ + + QP + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ + V++Y+G Q ER + +I Q V++T++ I++ DR F+++ + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P++F + + + F +S ++ ++ +++ + + ++L PF LRRLKS V ++P K + PL+ Q Y +TI ++ + D L+ ++ S + + TDS+ L K+ ++ D S+T ++ F + + ++ H ++YP G +K+ E+L+ S K LD LP + G K+LIFSQ +LDI+ ++ + Y RLDGS S DR + + +F+ D ++ +F+L+TRAGGLGINLTSA+ VIIFD D+NP D QA+DR HR+GQ + V V +LI+ TIDE IL A+ K KLE++ + Sbjct: 209 LDPERTVNGQPVPAQQPQLFTGGV-MRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVTSFEIAM---RDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVF-DDLKSFESWFDISTITSDAENIVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDE-SAPAPLTPSGRPKRRSRKVVNYTEPNTDSMKDLEKYLEKVQQEL----DSQASSTPVVNVFMPVDAQVNLKLQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERASAKRKLEKMVI 763
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Match: hells (helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]) HSP 1 Score: 305.064 bits (780), Expect = 3.423e-91 Identity = 191/565 (33.81%), Postives = 313/565 (55.40%), Query Frame = 2 Query: 572 VDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILY----RQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSI------LRKISHDMLLDEDHITSNTELI--FEDLSYMHDFEI------------HQNCLKYP--HAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +D + ++ + + QP + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ + V++Y+G Q ER + +I Q V++T++ I++ DR F+++ + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P++F + + + F +S ++ ++ +++ + + ++L PF LRRLKS V ++P K + PL+ Q Y +TI ++ + D L+ ++ S + + TDS+ L K+ ++ D S+T ++ F + + ++ H ++YP G +K+ E+L+ S K LD LP + G K+LIFSQ +LDI+ ++ + Y RLDGS S DR + + +F+ D ++ +F+L+TRAGGLGINLTSA+ VIIFD D+NP D QA+DR HR+GQ + V V +LI+ TIDE IL A+ K KLE++ + Sbjct: 194 LDPERTVNGQPVPAQQPQLFTGGV-MRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVTSFEIAM---RDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVF-DDLKSFESWFDISTITSDAENIVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDE-SAPAPLTPSGRPKRRSRKVVNYTEPNTDSMKDLEKYLEKVQQEL----DSQASSTPVVNVFMPVDAQVNLKLQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERASAKRKLEKMVI 748
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Match: hells (helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]) HSP 1 Score: 305.064 bits (780), Expect = 3.423e-91 Identity = 191/565 (33.81%), Postives = 313/565 (55.40%), Query Frame = 2 Query: 572 VDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILY----RQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSI------LRKISHDMLLDEDHITSNTELI--FEDLSYMHDFEI------------HQNCLKYP--HAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +D + ++ + + QP + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ + V++Y+G Q ER + +I Q V++T++ I++ DR F+++ + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P++F + + + F +S ++ ++ +++ + + ++L PF LRRLKS V ++P K + PL+ Q Y +TI ++ + D L+ ++ S + + TDS+ L K+ ++ D S+T ++ F + + ++ H ++YP G +K+ E+L+ S K LD LP + G K+LIFSQ +LDI+ ++ + Y RLDGS S DR + + +F+ D ++ +F+L+TRAGGLGINLTSA+ VIIFD D+NP D QA+DR HR+GQ + V V +LI+ TIDE IL A+ K KLE++ + Sbjct: 194 LDPERTVNGQPVPAQQPQLFTGGV-MRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVTSFEIAM---RDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVF-DDLKSFESWFDISTITSDAENIVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDE-SAPAPLTPSGRPKRRSRKVVNYTEPNTDSMKDLEKYLEKVQQEL----DSQASSTPVVNVFMPVDAQVNLKLQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERASAKRKLEKMVI 748
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Match: larp4b (La ribonucleoprotein domain family member 4B [Source:Xenbase;Acc:XB-GENE-966333]) HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0 Identity = 284/637 (44.58%), Postives = 427/637 (67.03%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMT 2167 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L + G ++QP ++ +L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ T Sbjct: 352 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQL-------TEDGECGWNIEQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDMTT 980
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Match: larp4b (La ribonucleoprotein domain family member 4B [Source:Xenbase;Acc:XB-GENE-966333]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 285/637 (44.74%), Postives = 425/637 (66.72%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMT 2167 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L + G ++QP I L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ T Sbjct: 352 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQL-------TEDGECGWNIEQPSII---LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDMTT 977
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Match: larp4b (La ribonucleoprotein domain family member 4B [Source:Xenbase;Acc:XB-GENE-966333]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 284/633 (44.87%), Postives = 424/633 (66.98%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L + G ++QP I L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ Sbjct: 139 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQL-------TEDGECGWNIEQPSII---LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQ 760
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Match: larp4b (La ribonucleoprotein domain family member 4B [Source:Xenbase;Acc:XB-GENE-966333]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 285/633 (45.02%), Postives = 424/633 (66.98%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L D G ++QP I L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ Sbjct: 185 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQLTE----DGECGWN---IEQPSII---LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQ 806
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Match: larp4b (La ribonucleoprotein domain family member 4B [Source:Xenbase;Acc:XB-GENE-966333]) HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0 Identity = 284/633 (44.87%), Postives = 424/633 (66.98%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L + G ++QP I L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ Sbjct: 118 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQL-------TEDGECGWNIEQPSII---LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQ 739
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Match: Smarcad1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:MGI Symbol;Acc:MGI:95453]) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 287/624 (45.99%), Postives = 412/624 (66.03%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQS-DSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMT 2167 IL + S++ +L+ I CS+ KA +I + RP+ + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G KGPH+IVVP ST++NW RE++ WC +L V+ YYG+Q+ER+++R+ I + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F K +QS + ++I+ K+++ PF LRR+K +VL +P K I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + Y+L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ T Sbjct: 384 ILHFLQVSSIAELTLIPKCSQKKAQKITELRPFNNWEALFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNR--EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQH-INSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTT 998
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Match: Hells (helicase, lymphoid specific [Source:MGI Symbol;Acc:MGI:106209]) HSP 1 Score: 301.982 bits (772), Expect = 4.531e-90 Identity = 183/543 (33.70%), Postives = 298/543 (54.88%), Query Frame = 2 Query: 611 LDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIF--LTENEGLKKIFQMSQKST-LKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER-----MKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISH-------DMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAV--------GKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQI 2158 QP + + ++ YQ+ G+ WLR++ E +NGILADEMGLGKTVQ IA ++ ++ G+ GP ++ P STL NW E ++ + ++Y+G +++RR++ I + V++T++ I++ D+ ++ + Y + DE H +KNM + L F KLLLTGTPLQNN+ EL SLL+F++P++F L E I +S+ + + + + + ++L PF LRRLKS V ++P K + PL Q I Y + R +C+ + + RK N+S L D + + + IS + + E +I +E+ +L + + + C +P+ + ++K+ EEL+ S K LD LP + G K+L+FSQ +LDI+ ++ + + RLDGS S +R+ I FN D D+ +F+++TRAGGLGINLT+A+ VII+D D+NP +D QA+DR HR+GQ + V V +L++ TID+ I+ A K KLE++ Sbjct: 195 FQQPKHFTGGV-MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAM---RDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRKSINYSEL--DQFPSELEKLISQIQPEVNRERTVVEGNIPIESEV---NLKLRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKL 728
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Match: Chd1 (chromodomain helicase DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:88393]) HSP 1 Score: 297.36 bits (760), Expect = 1.095e-86 Identity = 193/529 (36.48%), Postives = 291/529 (55.01%), Query Frame = 2 Query: 617 QPHYI--NPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLL-DSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMR---YRIAQSD--SFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALST----VMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 QP YI + L L+ YQL G+NWL + + ILADEMGLGKT+QTI+FL+YL + L GP ++VVP STL +W+RE+ W + +VY G+ + R +R + Q+ FN+LLTTY I + +D+ F+ L++ + DEAH LKN S+ YK L +FK +LL+TGTPLQN++ EL SLL F+MP F + ++ ++ K + + + + L PF LRR+K V +P K +I + +S Q Y+ + R N + + G K + S +MEL+K NH L++ N E + + H L+ S K+ LD+ L E G+++LIFSQ + +LDI+ E+LKY+Q + RLDGS + R+ +D FN E + F+L+TRAGGLGINL SA+ V+IFD D+NP ND QA+ R+HR+GQ + V + +L++KG+++E IL A +K+ L+ + + Sbjct: 467 QPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILL---KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS--------WEDFEEEHGKGREYG---YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTR--NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKP---------------------PDNNEFYNKQEALQH-----------------------LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVI 935
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Match: Smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:MGI Symbol;Acc:MGI:1935129]) HSP 1 Score: 295.049 bits (754), Expect = 6.484e-86 Identity = 188/522 (36.02%), Postives = 286/522 (54.79%), Query Frame = 2 Query: 614 DQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 D P Y+ L+ YQ+ G+NWL ++E +NGILADEMGLGKT+QTI+ L Y+ + GPH+++VP STL+NW E KW L+ + G++++R + ++V +T+Y + I KE +F KK ++ Y V DEAH +KN S + + FK +LLLTGTPLQNN+ EL SLL+F++P++F + ++ F + + D K + ++ +L PF LRR+K+ V +P K + LS+ Q Y + + + + + A + L+ +M+LRK NH L D T++ MH L+ S K+ LD+ LP E G ++LIFSQ VLDI+E++ ++ Y RLDG T D+RQD I+ +NE + K VF+L+TRAGGLGINL +A+VVI++D D+NP D QA DR+HR+GQ + V+V + I+ T++E I+ A KL+L+ I + Sbjct: 169 DSPSYVKWG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLI--KEKSVF-KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADD-FDSWFDTN-------NCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF--------------DGAEPGPPYTTD----------MH-----------------------LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVI 631
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Match: Smarca2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]) HSP 1 Score: 298.13 bits (762), Expect = 1.284e-85 Identity = 183/517 (35.40%), Postives = 291/517 (56.29%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-------LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQL G+ W+ ++ NLNGILADEMGLGKT+QTIA ++YL++ L GP++I+VP STL+NW E KW ++ I Y G RR + ++ +S FNVLLTTY I +D+ + K+ + Y + DE H +KN + L +++ R++LLTGTPLQN + EL +LL+F++P IF + + ++ F T ++ N+++ I ++ ++L PF LRRLK +V SQ+P K + +S Q ILYR + D + K ++T+M+LRK+ NH + + H +S + + + + + EL A GK++L LD LP ++L+F Q ++ I+E++ ++ YLRLDG+T ++DR + +FNE +F+L+TRAGGLG+NL +A+ V+IFD D+NP+ D QA+DR+HR+GQ +V+V++L + +++E IL A KL ++Q Sbjct: 735 LKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQL-RSGKFNVLLTTYEYII---KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCST-FEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYS-----NGVINGAELY--------------------RASGKFEL-------------LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1207
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Match: sp|E7F1C4|SMRDB_DANRE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B OS=Danio rerio OX=7955 GN=smarcad1b PE=3 SV=1) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 296/621 (47.67%), Postives = 419/621 (67.47%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL +F ++VD+L+ I GCS KA +I + RP+KT DL + N +S +L+ GC E+L ++ + L+ KC +IS L++ + ++ D G+ + QP ++ + LK YQLIG+NWL ++H+ L+GILADEMGLGKT+Q I+FL++L G GPH+I VP STL+NW REL+ WC + KV+VYYG+ D+R+ MRY I Q +N++++TYN++I + DR KL Y VFDE H+LKNM S+RY++L K +LLLTGTPLQNN++EL+SLL+F+MPN+F + + K+F M KS+ +QSSF D+I+ K ++ PF LRR+KS+VL Q+P K ++ +SE Q LY + ++K+ + G K L+ VM +LRK+SNH LL R YT L+ +S ML + H ++ LI ED+ + DFE+H+ C +Y A+ +Y+L ++LL S K+ L + L E GD++++FSQF M+LDI+E FL++ + Y RLDGST DR IDQFN D DI VF+L+TRAGGLGINLTSANVVI+ DID NPYND+QAE R HR+GQ + VKVIKLISK +I++ +LRI KLKLEQ Sbjct: 322 ILCFFQSASVDELTLIAGCSLKKAQKITELRPFKTWKDLDDAMRRRNGLSAELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQVM-----DKGPGS----MTQPEILSSTFQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGNHGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSM--KSSEEQSSFERDRITHAKLIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSN---GEKRELTNVMMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHRLCQQY-SALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQ 927
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Match: sp|Q5FWR0|SMRCD_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Xenopus tropicalis OX=8364 GN=smarcad1 PE=2 SV=1) HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0 Identity = 284/637 (44.58%), Postives = 427/637 (67.03%), Query Frame = 2 Query: 284 SNSMKLDE---INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMT 2167 S KL+E IL + +++D+L I CS KA +I + RP+ + + L K+N +S+ LI C ++ ++ +++L+ KC +IS L +++ L + G ++QP ++ +L LK YQ IG+NWL ++H+ +N ILADEMGLGKTVQ IAFL++L +G GPH++VVP ST++NW RE ++WC ++ +++YYG+Q+ER+ +RY I + FNV++TTYN +ISS EDR ++L + VFDE HMLKNM +IRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + +K++F KST +Q+ F ++I+ K+++ PF LRR+KS+VL Q+P K +I +S+ Q LY + ++K D + +M LRK++NH LL R +YT LR +S ML + H +N +LIFED+ M DFE+H+ C ++ + +YKL +EL+L S K L++ L + GD++++FSQF M+LDI+E FL++ Q Y+RLDG T +R ID+FN D DI +F+L+T+AGGLGINLTSAN+VI+ DID NPYND+QAEDR HR+GQ ++VKVIKLI KGTI+E +L+I+ +KL+LEQ T Sbjct: 352 SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTQL-------TEDGECGWNIEQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT-TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDMTT 980
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Match: sp|E1B7X9|SMRCD_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Bos taurus OX=9913 GN=SMARCAD1 PE=3 SV=2) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 286/620 (46.13%), Postives = 414/620 (66.77%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL + +++ +L+ I CS+ KA +I + RP+ + + L K N +S+ LI C ++ + +I+L+ KC IS L +++ L + G N +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G KGPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++RY I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F K +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLI +GTI+E +L+I +KLKLEQ Sbjct: 391 ILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIKLMNKCEDISNKLTKQVTMLT------GNGGGWNT--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQ 1001
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Match: sp|D3Z9Z9|SMRCD_RAT (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Rattus norvegicus OX=10116 GN=Smarcad1 PE=1 SV=1) HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0 Identity = 286/624 (45.83%), Postives = 414/624 (66.35%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQS-DSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMT 2167 IL + +++ +L+ I CS+ KA +I++ RP+ + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G KGPH+IVVP ST++NW RE++ WC L V+ YYG+Q+ER+++R+ I + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L + +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F K +QS + ++I+ K+++ PF LRR+K +VL +P K +I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + Y+L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ T Sbjct: 387 ILHFLQDASIGELTLIPKCSQKKAQKIIELRPFNNWETLFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNI--EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQH-INSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTT 1001
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Match: sp|Q9H4L7|SMRCD_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Homo sapiens OX=9606 GN=SMARCAD1 PE=1 SV=2) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 286/620 (46.13%), Postives = 415/620 (66.94%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL + +++ +L+ I CS+ KA +I + RP+ + + L K N +S+ LI C ++ + +I L+ KC IS L +++ L + G N+ +QP +N SL LK YQ +G+NWL +VH+ LNGILADEMGLGKT+Q IAFL+YL G GPH+IVVP ST++NW RE++ WC LKV+ YYG+Q+ER+++R+ I ++ + +NV++TTYN +ISS +DR ++L Y +FDE HMLKNM SIRY++L +LLLTGTP+QNN++EL+SLL+FVMP++F + ++++F KS +QS + ++I+ K+++ PF LRR+K +VL Q+P K I L +SE Q LY R+K ++ + +M+LRK++NH LL R +YT L+++S ML + H +N +LIFED+ M DFE+H C +Y H + ++L +L+L S K + L L + GD++++FSQF M+LDI+E LK+ Q YLRLDG T +R ID+FN D DI VF+L+T+AGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ ++V VIKLIS+GTI+E +L+I +KLKLEQ Sbjct: 389 ILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLT------GNGGGWNI--EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH-INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Match: A0A1I8JF11 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 299/658 (45.44%), Postives = 443/658 (67.33%), Query Frame = 2 Query: 275 HEESNSMKLDE--INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEG---LKKIFQMSQKSTLK---------------QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTI----ERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE-ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +E +S++ DE +LD+FN + + +L I S+ KA + K RP++ DDL + + L+ G E+L +++ ++ L+ KC I+ L R+ LL SV +DS+ T + L QP +NP LHLK YQ++G+NWLR++HEENL+ IL D+MGLGKT+Q IAFL+ LL+ G +GPH+++VP+STL NWERE+ KWC L+ + Y+G+ +ER+ R I ++ F+VLLTTYNI+ + EDR +K LDF YG+FDEAHMLKN S RYK L NF++KR++LLTGTPLQNN+VEL+SLLSFV+P++F + LKK+F + +S ++++ ++I K ++ PF LRR K+QVL+Q+P KT E+ L+P++E Q Y++ + R + + + A++ +++LRK +NH LL R YTDS+LR+++ ML D H+ +N + I+EDL+ M+DFE+H+ C YP + +++L E E LL S K+ LD LP G ++ +FSQF+M+LDIV+ +L+ + I +LR+DGST +RQ +D+F ED I VF+L+TRAGGLGINLT+A+ VII DID+NPYND+QAEDR HRLGQ R V+VI+L+S +++ + RIA EKL+LE+ Sbjct: 2325 YENKHSVQSDEDKAAVLDFFNTAALSELMHIPTVSKKKAEILYKMRPFEDFDDLLNRLESHRQFNSSLVQGAREVLHMRRMVVYLMNKCEVITQKLESRVASLLDSVTLDSAGDTGGITL-QPAALNPDLHLKPYQMVGLNWLRLLHEENLSAILGDQMGLGKTIQIIAFLAQLLEEGDRGPHLVIVPSSTLVNWEREIRKWCPQLQAVTYHGSMEERKAARQAIYSGETQFHVLLTTYNIATGTLEDRAMMKNLDFEYGIFDEAHMLKNCQSRRYKMLMNFRVKRRILLTGTPLQNNLVELMSLLSFVIPDVFSASRQCADLLKKMFNLFSRSATTDESSAGSAMPAAAADRTTYEMERIQHAKRLMRPFFLRRTKAQVLTQLPAKTEEVMLVPMTERQRHEYQELVASLRRRFEGAGERGSSGEVAVNYILQLRKAANHCLLHRRVYTDSLLRQMASKMLKDPGHLRANEDYIYEDLAAMNDFELHRTCQMYP-VLAEHQLDEAEHLLLSGKLVALDSLLPELTAAGHRVALFSQFVMMLDIVQAYLQLRAIRFLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRLGQERPVRVIRLLSADSVEVGVHRIACEKLRLEK 2980
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Match: A0A1I8GQ42 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 299/658 (45.44%), Postives = 443/658 (67.33%), Query Frame = 2 Query: 275 HEESNSMKLDE--INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEG---LKKIFQMSQKSTLK---------------QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTI----ERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE-ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +E +S++ DE +LD+FN + + +L I S+ KA + K RP++ DDL + + L+ G E+L +++ ++ L+ KC I+ L R+ LL SV +DS+ T + L QP +NP LHLK YQ++G+NWLR++HEENL+ IL D+MGLGKT+Q IAFL+ LL+ G +GPH+++VP+STL NWERE+ KWC L+ + Y+G+ +ER+ R I ++ F+VLLTTYNI+ + EDR +K LDF YG+FDEAHMLKN S RYK L NF++KR++LLTGTPLQNN+VEL+SLLSFV+P++F + LKK+F + +S ++++ ++I K ++ PF LRR K+QVL+Q+P KT E+ L+P++E Q Y++ + R + + + A++ +++LRK +NH LL R YTDS+LR+++ ML D H+ +N + I+EDL+ M+DFE+H+ C YP + +++L E E LL S K+ LD LP G ++ +FSQF+M+LDIV+ +L+ + I +LR+DGST +RQ +D+F ED I VF+L+TRAGGLGINLT+A+ VII DID+NPYND+QAEDR HRLGQ R V+VI+L+S +++ + RIA EKL+LE+ Sbjct: 614 YENKHSVQSDEDKAAVLDFFNTAALSELMHIPTVSKKKAEILYKMRPFEDFDDLLNRLESHRQFNSSLVQGAREVLHMRRMVVYLMNKCEVITQKLESRVASLLDSVTLDSAGDTGGITL-QPAALNPDLHLKPYQMVGLNWLRLLHEENLSAILGDQMGLGKTIQIIAFLAQLLEEGDRGPHLVIVPSSTLVNWEREIRKWCPQLQAVTYHGSMEERKAARQAIYSGETQFHVLLTTYNIATGTLEDRAMMKNLDFEYGIFDEAHMLKNCQSRRYKMLMNFRVKRRILLTGTPLQNNLVELMSLLSFVIPDVFSASRQCADLLKKMFNLFSRSATTDESSAGSAMPAAAADRTTYEMERIQHAKRLMRPFFLRRTKAQVLTQLPAKTEEVMLVPMTERQRHEYQELVASLRRRFEGAGERGSSGEVAVNYILQLRKAANHCLLHRRVYTDSLLRQMASKMLKDPGHLRANEDYIYEDLAAMNDFELHRTCQMYP-VLAEHQLDEAEHLLLSGKLVALDSLLPELTAAGHRVALFSQFVMMLDIVQAYLQLRAIRFLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRLGQERPVRVIRLLSADSVEVGVHRIACEKLRLEK 1269
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Match: A0A267EFE2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005593g2 PE=4 SV=1) HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0 Identity = 299/658 (45.44%), Postives = 443/658 (67.33%), Query Frame = 2 Query: 275 HEESNSMKLDE--INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEG---LKKIFQMSQKSTLK---------------QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTI----ERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE-ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +E +S++ DE +LD+FN + + +L I S+ KA + K RP++ DDL + + L+ G E+L +++ ++ L+ KC I+ L R+ LL SV +DS+ T + L QP +NP LHLK YQ++G+NWLR++HEENL+ IL D+MGLGKT+Q IAFL+ LL+ G +GPH+++VP+STL NWERE+ KWC L+ + Y+G+ +ER+ R I ++ F+VLLTTYNI+ + EDR +K LDF YG+FDEAHMLKN S RYK L NF++KR++LLTGTPLQNN+VEL+SLLSFV+P++F + LKK+F + +S ++++ ++I K ++ PF LRR K+QVL+Q+P KT E+ L+P++E Q Y++ + R + + + A++ +++LRK +NH LL R YTDS+LR+++ ML D H+ +N + I+EDL+ M+DFE+H+ C YP + +++L E E LL S K+ LD LP G ++ +FSQF+M+LDIV+ +L+ + I +LR+DGST +RQ +D+F ED I VF+L+TRAGGLGINLT+A+ VII DID+NPYND+QAEDR HRLGQ R V+VI+L+S +++ + RIA EKL+LE+ Sbjct: 532 YENKHSVQSDEDKAAVLDFFNTAALSELMHIPTVSKKKAEILYKMRPFEDFDDLLNRLESHRQFNSSLVQGAREVLHMRRMVVYLMNKCEVITQKLESRVASLLDSVTLDSAGDTGGITL-QPAALNPDLHLKPYQMVGLNWLRLLHEENLSAILGDQMGLGKTIQIIAFLAQLLEEGDRGPHLVIVPSSTLVNWEREIRKWCPQLQAVTYHGSMEERKAARQAIYSGETQFHVLLTTYNIATGTLEDRAMMKNLDFEYGIFDEAHMLKNCQSRRYKMLMNFRVKRRILLTGTPLQNNLVELMSLLSFVIPDVFSASRQCADLLKKMFNLFSRSATTDESSAGSAMPAAAADRTTYEMERIQHAKRLMRPFFLRRTKAQVLTQLPAKTEEVMLVPMTERQRHEYQELVASLRRRFEGAGERGSSGEVAVNYILQLRKAANHCLLHRRVYTDSLLRQMASKMLKDPGHLRANEDYIYEDLAAMNDFELHRTCQMYP-VLAEHQLDEAEHLLLSGKLVALDSLLPELTAAGHRVALFSQFVMMLDIVQAYLQLRAIRFLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRLGQERPVRVIRLLSADSVEVGVHRIACEKLRLEK 1187
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Match: A0A267EXG9 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig032428g1 PE=4 SV=1) HSP 1 Score: 593.578 bits (1529), Expect = 0.000e+0 Identity = 299/658 (45.44%), Postives = 443/658 (67.33%), Query Frame = 2 Query: 275 HEESNSMKLDE--INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEG---LKKIFQMSQKSTLK---------------QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTI----ERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE-ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +E +S++ DE +LD+FN + + +L I S+ KA + K RP++ DDL + + L+ G E+L +++ ++ L+ KC I+ L R+ LL SV +DS+ T + L QP +NP LHLK YQ++G+NWLR++HEENL+ IL D+MGLGKT+Q IAFL+ LL+ G +GPH+++VP+STL NWERE+ KWC L+ + Y+G+ +ER+ R I ++ F+VLLTTYNI+ + EDR +K LDF YG+FDEAHMLKN S RYK L NF++KR++LLTGTPLQNN+VEL+SLLSFV+P++F + LKK+F + +S ++++ ++I K ++ PF LRR K+QVL+Q+P KT E+ L+P++E Q Y++ + R + + + A++ +++LRK +NH LL R YTDS+LR+++ ML D H+ +N + I+EDL+ M+DFE+H+ C YP + +++L E E LL S K+ LD LP G ++ +FSQF+M+LDIV+ +L+ + I +LR+DGST +RQ +D+F ED I VF+L+TRAGGLGINLT+A+ VII DID+NPYND+QAEDR HRLGQ R V+VI+L+S +++ + RIA EKL+LE+ Sbjct: 54 YENKHSVQSDEDKAAVLDFFNTAALSELMHIPTVSKKKAEILYKMRPFEDFDDLLNRLESHRQFNSSLVQGAREVLHMRRMVVYLMNKCEVITQKLESRVASLLDSVTLDSAGDTGGITL-QPAALNPDLHLKPYQMVGLNWLRLLHEENLSAILGDQMGLGKTIQIIAFLAQLLEEGDRGPHLVIVPSSTLVNWEREIRKWCPQLQAVTYHGSMEERKAARQAIYSGETQFHVLLTTYNIATGTLEDRAMMKNLDFEYGIFDEAHMLKNCQSRRYKMLMNFRVKRRILLTGTPLQNNLVELMSLLSFVIPDVFSASRQCADLLKKMFNLFSRSATTDESSAGSAMPAAAADRTTYEMERIQHAKRLMRPFFLRRTKAQVLTQLPAKTEEVMLVPMTERQRHEYQELVASLRRRFEGAGERGSSGEVAVNYILQLRKAANHCLLHRRVYTDSLLRQMASKMLKDPGHLRANEDYIYEDLAAMNDFELHRTCQMYP-VLAEHQLDEAEHLLLSGKLVALDSLLPELTAAGHRVALFSQFVMMLDIVQAYLQLRAIRFLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRLGQERPVRVIRLLSADSVEVGVHRIACEKLRLEK 709
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Match: A0A267FB37 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005593g1 PE=4 SV=1) HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0 Identity = 299/658 (45.44%), Postives = 443/658 (67.33%), Query Frame = 2 Query: 275 HEESNSMKLDE--INILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEG---LKKIFQMSQKSTLK---------------QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTI----ERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPE-ELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +E +S++ DE +LD+FN + + +L I S+ KA + K RP++ DDL + + L+ G E+L +++ ++ L+ KC I+ L R+ LL SV +DS+ T + L QP +NP LHLK YQ++G+NWLR++HEENL+ IL D+MGLGKT+Q IAFL+ LL+ G +GPH+++VP+STL NWERE+ KWC L+ + Y+G+ +ER+ R I ++ F+VLLTTYNI+ + EDR +K LDF YG+FDEAHMLKN S RYK L NF++KR++LLTGTPLQNN+VEL+SLLSFV+P++F + LKK+F + +S ++++ ++I K ++ PF LRR K+QVL+Q+P KT E+ L+P++E Q Y++ + R + + + A++ +++LRK +NH LL R YTDS+LR+++ ML D H+ +N + I+EDL+ M+DFE+H+ C YP + +++L E E LL S K+ LD LP G ++ +FSQF+M+LDIV+ +L+ + I +LR+DGST +RQ +D+F ED I VF+L+TRAGGLGINLT+A+ VII DID+NPYND+QAEDR HRLGQ R V+VI+L+S +++ + RIA EKL+LE+ Sbjct: 48 YENKHSVQSDEDKAAVLDFFNTAALSELMHIPTVSKKKAEILYKMRPFEDFDDLLNRLESHRQFNSSLVQGAREVLHMRRMVVYLMNKCEVITQKLESRVASLLDSVTLDSAGDTGGITL-QPAALNPDLHLKPYQMVGLNWLRLLHEENLSAILGDQMGLGKTIQIIAFLAQLLEEGDRGPHLVIVPSSTLVNWEREIRKWCPQLQAVTYHGSMEERKAARQAIYSGETQFHVLLTTYNIATGTLEDRAMMKNLDFEYGIFDEAHMLKNCQSRRYKMLMNFRVKRRILLTGTPLQNNLVELMSLLSFVIPDVFSASRQCADLLKKMFNLFSRSATTDESSAGSAMPAAAADRTTYEMERIQHAKRLMRPFFLRRTKAQVLTQLPAKTEEVMLVPMTERQRHEYQELVASLRRRFEGAGERGSSGEVAVNYILQLRKAANHCLLHRRVYTDSLLRQMASKMLKDPGHLRANEDYIYEDLAAMNDFELHRTCQMYP-VLAEHQLDEAEHLLLSGKLVALDSLLPELTAAGHRVALFSQFVMMLDIVQAYLQLRAIRFLRIDGSTPVGERQVLLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRLGQERPVRVIRLLSADSVEVGVHRIACEKLRLEK 703
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Match: smarcad1b (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like [Source:NCBI gene;Acc:103041701]) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 306/621 (49.28%), Postives = 427/621 (68.76%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI-AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL++F +TVD+L+ I GCS KA +I++ RPYKT +DL + N +S +L+ GC E+L ++ + L+ KC IS + E ++ G +++ QPH +N + HLK YQLIG+NWL ++H+ L+GILADEMGLGKT+Q I+FL++L G GPH+I VP+STL+NW REL+ WC +LKV+VYYG+ +ERR +RY I + +N++++TYN++I + DR +KL Y VFDE HMLKNM S+RY++L K +LLLTGTPLQNN++EL+SLL+F+MPN+F + + K+F M KS+ +QSSF D+I+ K ++ PF LRR+KS+VL Q+P K +I P+SE Q LY + R+KN +++ K L+ VM +LRK++NH LL R +YT L +S ML + H S+ LI ED++ M DFE+H+ C +Y + +++L +LL S K+Q L + L E GD++++FSQF M+LDI+E LK+ + Y+RLDGST DR IDQFN D DI VF+L+TRAGGLGINLTSANVVI+ DID NPYND+QAEDR HR+GQ R VKVIKLISK +I++ +LRI KLKLEQ Sbjct: 297 ILNFFQNATVDELTLIAGCSLKKAQKIVELRPYKTWNDLDEVLHRGNGLSNELLAGCREVLREREVVQGLMGKCEDISRRMTEVVQK-----------GQGSMV--QPHILNSAFHLKPYQLIGLNWLVLLHQNELSGILADEMGLGKTIQAISFLAHLYQEGNPGPHLITVPSSTLDNWVRELNLWCPSLKVLVYYGSIEERRCVRYEILNEMVDYNIIVSTYNLAIGNASDRSLFRKLKLEYAVFDEGHMLKNMSSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFAM--KSSEEQSSFERDRIAHAKLIMKPFILRRIKSEVLKQLPAKEEQIEFCPMSEKQQQLYDELFNRLKNARNEE---KRELTNVMMQLRKMANHPLLHRQYYTSQRLAAMSRLMLKEPSHRESDPALIQEDMALMSDFELHRLCQQYTVLI-EHQLDMDLLQDSGKLQLLIQILKDLKEKGDRVVLFSQFTMMLDILEVLLKHHKHRYIRLDGSTPMGDRIVLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSIEDAMLRIGQRKLKLEQ 898
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Match: smarcad1a (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 a [Source:NCBI gene;Acc:557875]) HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 291/621 (46.86%), Postives = 419/621 (67.47%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSD-SFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 +L + ++++D+L+ I+GCS KA +I++ RPYK DL +AN +S L+DGC +L +Q L +L+ +C I+ + + D+ + + QP +NP L+ YQLIG+ WL ++H+ NL+GILADEMGLGKT+Q I+FL+YLL G KGPH+I VP+STL+NW REL WC +LKVIVYYG+ ++R+ +R+ I FNV+++TYN++I ++ DR +KL Y VFDE HMLKNM S+RY++L + + +LLLTGTPLQNN++ELISLL+F+MP++F + + K+F S KS+ ++SSF+ ++I+Q K ++ PF LRR+KS+VL Q+P K +I + P+S+AQ LY + +R K+ + G K L VM +LRK++NH LL R +YT L +S ML + H +N LI ED+ M DFE+H C ++ ++ Y+L ++LLL S K L L E GD++++FSQF MVLDIVE +++ Y+RLDGS +R ID++N D ++ VF+L+TRAGG GINL SAN VII DID NP+ND+QAEDR HR+GQ R V+VIKL+SK TI+ C+LR+ EKLKLEQ Sbjct: 80 VLKFLQEASLDELALISGCSLKKAQKIIEMRPYKRWQDLNEPFSRANGLSMDLVDGCKLVLKERQVLKQLMGRCESIAKKM---------TKDVAGVIKNGTCSMKQPSVLNPKFKLQQYQLIGLKWLILLHQHNLSGILADEMGLGKTIQAISFLAYLLQKGNKGPHLITVPSSTLDNWVRELELWCPSLKVIVYYGSVEDRKYLRHDILNGRVDFNVIVSTYNLTIGNENDRSLFRKLKLNYAVFDEGHMLKNMNSLRYRHLMSINAEHRLLLTGTPLQNNLLELISLLNFIMPSMFSSSTSQISKMF--STKSSEEESSFHKERIAQAKLIMKPFILRRVKSEVLKQLPAKFEKIEMCPMSDAQQQLYEELWKRAKS--NAVPGQKRDLCNVMMQLRKMANHPLLHRQYYTTEKLAAMSQAMLKEPTHFDANPALIQEDMEVMSDFELHNLCKEFS-SISSYQLDKKLLLDSGKFSLLTRLLAELKEKGDRVVLFSQFTMVLDIVEVLMEHLGHEYVRLDGSIPMAERIGLIDKYNTDPEVFVFLLSTRAGGQGINLASANTVIIHDIDCNPFNDKQAEDRCHRMGQTRSVQVIKLVSKDTIEACMLRVGQEKLKLEQ 686
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Match: hells (helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]) HSP 1 Score: 296.59 bits (758), Expect = 1.940e-89 Identity = 186/561 (33.16%), Postives = 308/561 (54.90%), Query Frame = 2 Query: 572 VDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDER----RRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQ--------IKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKN---CQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTD--SILRKISHDMLLDEDHITSNTELIFE-----DLSYMHDFEIHQNC------LKYPHAVG--KYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +D + ++ + + QP + + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ + +++Y+G Q ER + +R V++T++ I++ ++++ + + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P++F + LK ST+ S ++ +++ + ++L PF LRRLKS V ++P K + PL+ Q YR ++R Q+ + + RK+ ++S + D + K+ +M E H S ++ +L + + + C ++YP G ++K+ E+L+ S K LD LP + G K+LIFSQ +LDI+ ++ + Y RLDGS DR++ + +F+ D ++ +F+L+TRAGGLGINLT+A+ VIIFD D+NP D QA+DR HR+GQ + V V +LI+ TIDE IL A+ K KLE++ + Sbjct: 58 LDPERTVNGQPVPSQQPKHFTGGV-MRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVMGPFLVVAPLSTLPNWISEFKRFTPEVSIMLYHGPQKERLNLIKNIRKPQGPLHMCPVVVTSFEIAMIDRKEK---NRYQWKYLIVDEGHRIKNLNCRLVRELKALPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVF----DDLKSFESWFDISTISGSDSDNIVVNEREQNILNMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTAKQEAFYRAIVDRTIAKVLGQEKVRILTPSGRPKRRSRKVVDYSEKSSESPQDLEKYIEKLQKEM---ESHFASVVDVQMPLDAQVNLKLQNVLMLLKRCCNHAYLIEYPLVPGTEEFKIDEQLVEASGKFMILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMKYSDREENMQKFSTDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERASAKRKLEKMVI 607
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Match: smarca1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Source:NCBI gene;Acc:103034185]) HSP 1 Score: 298.13 bits (762), Expect = 6.316e-88 Identity = 186/522 (35.63%), Postives = 282/522 (54.02%), Query Frame = 2 Query: 614 DQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 + P Y+ L+ YQ+ G+NW+ ++E +NGILADEMGLGKT+QTIA L YL + GPH+++VP STL+NW E +W LK + G++D R + ++V +T+Y + I K KK ++ Y V DEAH +KN S + + FK +LLLTGTPLQNN+ EL SLL+F++P++F + ++ F + + D K + ++ +L PF LRR+K +V +P K L LS+ Q Y + + + + + A + L+ +M+LRK NH L D T++T L+ S K+ LD+ LP E G ++LIFSQ VLDI+E++ ++ Y RLDG+T +DR+ ID FN + K +F+L+TRAGGLGINL +A+VVI++D D+NP D QA DR+HR+GQ + V+V +LI++ T++E I+ A KL+L+ I + Sbjct: 49 ESPSYVKNGT-LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASD-FDSWFDTN-------NCLGDQKLVERLHAVLRPFLLRRIKQEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF--------------DGAEPGPPYTTDTHLV---------------------------------TNSGKMLALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGNTPHEDREKAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITENTVEERIVERAEMKLRLDSIVI 511
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Match: smarca1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Source:NCBI gene;Acc:103034185]) HSP 1 Score: 297.745 bits (761), Expect = 6.716e-88 Identity = 186/522 (35.63%), Postives = 282/522 (54.02%), Query Frame = 2 Query: 614 DQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 + P Y+ L+ YQ+ G+NW+ ++E +NGILADEMGLGKT+QTIA L YL + GPH+++VP STL+NW E +W LK + G++D R + ++V +T+Y + I K KK ++ Y V DEAH +KN S + + FK +LLLTGTPLQNN+ EL SLL+F++P++F + ++ F + + D K + ++ +L PF LRR+K +V +P K L LS+ Q Y + + + + + A + L+ +M+LRK NH L D T++T L+ S K+ LD+ LP E G ++LIFSQ VLDI+E++ ++ Y RLDG+T +DR+ ID FN + K +F+L+TRAGGLGINL +A+VVI++D D+NP D QA DR+HR+GQ + V+V +LI++ T++E I+ A KL+L+ I + Sbjct: 49 ESPSYVKNGT-LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASD-FDSWFDTN-------NCLGDQKLVERLHAVLRPFLLRRIKQEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF--------------DGAEPGPPYTTDTHLV---------------------------------TNSGKMLALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGNTPHEDREKAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITENTVEERIVERAEMKLRLDSIVI 511
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Match: smarcad1a (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 a [Source:NCBI gene;Acc:557875]) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 282/628 (44.90%), Postives = 428/628 (68.15%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKANKISQK-LIDGCLE---ILVIKQNLIELLKKCVQISANL---LERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSD-SFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQ-KSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ-ITMT 2167 +L +F +T+++L+ + GCS KA I++ RP+ + DDL ++K L D E +L ++ ++ L+ C ++ L + R+R ++ D E+ +L QP +NP+ +KSYQL+G+NWL ++H++++NGILADEMGLGKTVQ I+FL++L++ G K PH+IVVP+STL+NW REL KWC +LKV++YYG+Q+ERR +R I FNV++TTY +I++ +DR ++L VFDE HMLKNM S+RY+ L +R+LLLTGTP+QNN++EL+SLL+FVMP +F + +++IF S K+ +QS F ++I Q K+++ PF LRRLK VL +P K+ + L P+SE Q+ LY Q ++ K D F + +M+LRK++NH L+ R YTD +R++S +L + H ++ L+ ED+ ++D E+H+ CL+YP ++ + LP +L S K+Q+L LP NGD++++FSQF M+LDI+ +FL + +YLR+DGST +R ID+FNE+ +I VF+L+TRAGGLG+NLTSAN VI+ D D NPYND+QAEDR HR+GQ R V+VI+LIS GT++E I++++ KL+L+Q IT+T Sbjct: 366 VLAFFCDATIEELTLVHGCSNKKADLIVELRPFTSWDDLMRKLTTKKGLSDLVWESNTVLKEREVVLRLMAGCSDVAGGLESCVNRLRRKELADD-----DKEHRMLRQPPILNPACKMKSYQLVGLNWLALLHKQDVNGILADEMGLGKTVQAISFLAHLVELGEKDPHVIVVPSSTLDNWTRELQKWCPDLKVLLYYGSQEERRHLRTDILHKQVDFNVIVTTYQCAITNVDDRSLFRRLRINCAVFDEGHMLKNMASLRYQNLMTINARRRLLLTGTPVQNNLLELMSLLNFVMPRMFSNSTQEIRRIFASSSTKNGQRQSKFERERIHQAKQIMKPFILRRLKIDVLQHLPRKSERMELCPMSERQASLYTQLVQSFKKSSDGVFKTTELCNVMMQLRKMANHPLMHRHLYTDDKIRQMSQLILKEPTHYDADPALVQEDMEVLNDLELHRLCLQYP-SLASHSLPRSAILSSGKLQFLSTLLPALRSNGDRVVMFSQFTMILDILVQFLDHHGYSYLRMDGSTRVAERIGLIDRFNEEPEIFVFLLSTRAGGLGLNLTSANTVILHDPDMNPYNDQQAEDRCHRVGQTRPVQVIRLISAGTVEEAIVQMSKHKLQLQQDITVT 987
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Match: hells (helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]) HSP 1 Score: 303.523 bits (776), Expect = 1.670e-91 Identity = 184/553 (33.27%), Postives = 305/553 (55.15%), Query Frame = 2 Query: 617 QPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEM----LAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDE-DHITSNTELIFEDLSYMHDFEIH---------------------QNCLKYPH-------AVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 QP + ++SYQ+ G+ WLRI+ E +NGILADEMGLGKTVQ IA ++ +++S + GP ++V P STL NW E ++ + V++Y+G+ DERR +R +IA+ V++T+Y I++ D +++ + + Y + DE H +KN+ + L + + KLLLTGTPLQNN+ EL SLL+F++P +F + + + F +S + ++ Q+ M L PF LRRLK+ V +P K + PL+ AQ LY+ + + + +V+ +++ I ++I++ L D + I + ELI ++I + C +P+ A ++K+ E L+ S K+ LD LP + G K+LIFSQ +++L+I+ ++ ++ + RLDGS +R++ + +FN D D+ +F+L+TRAGGLGINLT+A+ VII+D D+NP D QA+DR HR+GQ R V V ++++ T+D+ I+ A EK +LE++ + Sbjct: 202 QPRLFTGGI-MRSYQVEGMEWLRILWENGINGILADEMGLGKTVQCIATVALMVESSVMGPFLVVAPLSTLPNWISEFKRFTPKIPVMLYHGSADERRLLRPKIAKKQGELNICPVIVTSYEIAMI---DAKYLQTVYWKYLMLDEGHRIKNLNCRLIRELKRYHSENKLLLTGTPLQNNLAELWSLLNFLLPEVF-DDLKSFETWFDVSNLCGSVEEIVAKEQQEQVLHMLHQILTPFLLRRLKADVTIDVPPKREVLVYAPLTAAQDRLYKAIVNK-------------TIRSVLNPKEVQPEQKTPNGRPRRHIRKEINYAELNDSVNSIDNLEELIARQAQEEEQYKIKVDWAPQKSELNVQLSNILMMLRKCCNHPYLIEYPLTADREFKVDENLVKSSGKLLLLDRILPELRQRGHKVLIFSQMVVMLEILMDYCYLRKFHFSRLDGSMKYSEREENMHKFNTDPDVFIFLLSTRAGGLGINLTAADTVIIYDSDWNPQVDLQAQDRCHRIGQTRPVVVYRMVTANTVDQRIVERAGEKRRLEKLVI 736
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]) HSP 1 Score: 288.886 bits (738), Expect = 9.840e-88 Identity = 180/522 (34.48%), Postives = 280/522 (53.64%), Query Frame = 2 Query: 614 DQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK-ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA--LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 + P Y+ ++ YQ+ G+NWL ++E +NGILADEMGLGKT+QTI+ L Y+ + GPH+++VP STL+NW E +W +L+ + G++D R I ++V +T+Y + I K KK ++ Y V DEAH +KN S + + FK +LLLTGTPLQNN+ EL SLL+F++P++F + F + + F D + + ++ +L PF LRR+K+ V +P K + LS+ Q Y + + + + + A + L+ +M+LRK NH L D T++T ++ + S K+ LD+ LP E G ++LIFSQ ++DI+E++ ++ Y RLDG T +DRQ I FN D K VF+L+TRAGGLGINL +A+VVI++D D+NP D QA DR+HR+GQ + V+V + I++ T+++ I+ A KL+L+ I + Sbjct: 102 ESPSYVKCGT-MRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMAEFERWVPSLRAVCLIGDKDHRVSASQPIVPPIEWDVCVTSYEMIIREKS---VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF-NSADTFTSWFDTN-------NCFGDQQLVERLHMVLRPFLLRRIKADVEKSLPPKKECKIYIGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF--------------DGAEPGPPYTTDTHIV---------------------------------INSGKMVVLDKLLPKLHEQGSRVLIFSQMTRMMDILEDYCMWRGYEYCRLDGQTPHEDRQVSIASFNAPDSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKVVRVFRFITESTVEDRIVERAEMKLRLDSIVI 564
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Match: SMARCA2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:HGNC:11098]) HSP 1 Score: 295.049 bits (754), Expect = 2.934e-85 Identity = 183/517 (35.40%), Postives = 291/517 (56.29%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-------LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQ+ G+ WL ++ NLNGILADEMGLGKT+QTIA ++YL++ L GP +I+VP STL+NW E KW ++ I Y G+ RR ++ +S FNVLLTTY I +D+ + KL + Y + DE H +KN + L +++ R+LLLTGTPLQN + EL +LL+F++P IF + + ++ F T ++ N+++ I ++ ++L PF LRRLK +V SQ+P K + +S Q +LYR + D + K ++T+++LRK++NH + + H E L +P+++ + +L S K + LD LP + ++L+F Q ++ I+E++ ++ YLRLDG+T ++DR + + FNE + +F+L+TRAGGLG+NL +A+ VIIFD D+NP+ D QA+DR+HR+GQ +V+V++L + +++E IL A KL ++Q Sbjct: 736 LKMYQVQGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPFLIIVPLSTLSNWMMEFDKWGPSVVKISYKGSPIARRAFMPQL-RSGKFNVLLTTYEYII---KDKHVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYIAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCST-FEQWFNAPFALTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKVLYRHMQAKGVLLTDGSEKDKKGKGGAKTLMNTIVQLRKIANHPYM------------------------------------FQHIEESFAEHLGFPNSIVQGA---DLFRASGKFELLDRILPKLRVSNHRVLLFCQMTSLMTIMEDYFAFRSFRYLRLDGTTKSEDRSNLLKTFNEPNSPYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1208
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004254.1 (pep scaffold:Pmarinus_7.0:GL484668:1435:12215:1 gene:ENSPMAG00000003871.1 transcript:ENSPMAT00000004254.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 276.559 bits (706), Expect = 2.311e-84 Identity = 174/493 (35.29%), Postives = 264/493 (53.55%), Query Frame = 2 Query: 713 ILADEMGLGKTVQTIAFLSYLLDS-GLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMR-----YRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER-MKNCQDDAFGVKYA-LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 ILADEMGLGKT+QTI+FLSY+ S + GP ++VVP ST+ +W+RE W + V+VY G+ R +R ++ + FN L+TTY I + +D+ + +++ + DEAH LKN S+ YK L FK +LL+TGTPLQN++ EL SLL F+MP+ F + E + S +D+ + + L PF LRR+K V +P K +I + ++ Q Y+ + R K G L+ +MEL+K NH L++ L ED V K+ + L+ S K+ LD+ L E G ++LIFSQ + +LDI+ ++L K + RLDGS + R+ +D FN E + F+L+TRAGGLGINL SA+ V+IFD D+NP ND QA+ R+HR+GQ + V + +L+++GT++E I+ A +K+ L+ + + Sbjct: 7 ILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREYEWIHQQTKKLKFNALVTTYEILL---KDKTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDKF-SAWEDFDAV----------HGSGSDNGYVSLHKELEPFLLRRVKKDVERSLPAKVEQILRVEMTPQQKHYYKWILTRNFKALSKGTRGSTSGFLNIMMELKKCCNHCYLIK----------------LPED-----------------------------ENVDKHDALQSLVRSSGKLILLDKLLCRLRETGHRVLIFSQMVRMLDILADYLAMKHFPFQRLDGSIKNEQRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVI 440
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Match: FUN30 (Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs; potential Cdc28p substrate [Source:SGD;Acc:S000000017]) HSP 1 Score: 414.846 bits (1065), Expect = 1.226e-130 Identity = 232/534 (43.45%), Postives = 329/534 (61.61%), Query Frame = 2 Query: 617 QPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQ-SDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFN----DDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIE------RM---KNCQDDAFGVKYALST-----VMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHIT--SNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENL-PIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE 2152 +P ++P + LK YQ GINWL ++++ ++ ILAD+MGLGKT Q I+F +YL GPH++VVP+STL NW RE K+ LK+ YYG+ ER +R + + + ++V++TTYN++ +K D F+K +F V+DE HMLKN S R+ L + +LLLTGTPLQNN+ EL+SLL F+MPN+F+++ E IF+ K+T + N + I++ K M+ PF LRR K QVL +P K T I L+ Q +Y + I+ RM DA S+ +M LRK S H LL R+ Y D I+ K+S D +LDE N E I ED+SYM DFE+H+ C +P+ + KY+L + ++S KI L + L I ++ +K+LIFS F VLDI+E L +LRLDGST +DRQ ID+F ED DI +FIL+T+AGG GINL AN VIIFD +NP++DRQA DR+HR+GQ ++V + LI+K +I+E I ++A KL L+ Sbjct: 562 KPRLLSPEISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEPGPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMS-DAILDEPAYAENGNKEYIKEDMSYMTDFELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALD 1094
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Match: ISW2 (ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; the Isw2 complex exhibits basal levels of chromatin binding throughout the genome as well as target-specific chromatin interactions; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide [Source:SGD;Acc:S000005831]) HSP 1 Score: 308.916 bits (790), Expect = 1.324e-91 Identity = 192/529 (36.29%), Postives = 294/529 (55.58%), Query Frame = 2 Query: 605 LILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYL-LDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK---ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA----LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 + + P ++ S L+ YQ+ G+NWL +HE L+GILADEMGLGKT+QTI+FL YL ++GP +I+VP STL+NW RE KW N+ V+V +G++D R + I F+VL+T+Y + I K +K+L + Y V DEAH +KN S + + F K +LL+TGTPLQNN+ EL +LL+F++P+IF G ++F +Q++ D+ I Q+ +L PF LRR+K+ V + K + +++ Q Y+ +E+ + + A G + L+ VM+LRK NH L FE Y E L+ S K+ LD+ L E G ++LIFSQ +LDI+E++ ++ Y R+DGSTS ++R + ID++N+ + K VF+LTTRAGGLGINL +A+ VI+FD D+NP D QA DR+HR+GQ + V V + +++ I+E ++ A +KL+L+Q+ + Sbjct: 171 FVSESPSFVK-SGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKN---ALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIF-----GDSELFD----EWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL-------------------------------FEG----------------AEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVI 639
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Match: CHD1 (Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966]) HSP 1 Score: 304.294 bits (778), Expect = 7.662e-89 Identity = 195/525 (37.14%), Postives = 287/525 (54.67%), Query Frame = 2 Query: 617 QPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLK-GPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMR---------YRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNC-QDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE 2152 QP +I L+ +QL GINW+ + + NGILADEMGLGKTVQT+AF+S+L+ + + GPHIIVVP ST+ W KW +L I Y GNQ R +R + ++ FNVLLTTY + +DR + + + + DEAH LKN S Y+ L++FK+ ++L+TGTPLQNN+ EL +L++F+MP F + E F+ Q ++ I + + PF LRRLK V +P KT I + LS+ Q+ Y+ + + + A G ++L +M EL+K SNH L D+ + +L+K + E N L+ L++ S K+ LD+ L ++G ++LIFSQ + +LDI+ ++L K I + RLDG+ + R+ ID FN D VF+L+TRAGGLGINL +A+ V+IFD D+NP D QA R+HR+GQ V V +L+SK T++E +L A +K+ LE Sbjct: 367 QPPFIKGG-ELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYIL---KDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQE---IDFE-------NQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLF-DNAEERVLQKFGDGKMTRE------------------------NVLR------------GLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILE 840
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Match: SNF2 (Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816]) HSP 1 Score: 300.827 bits (769), Expect = 2.277e-87 Identity = 180/522 (34.48%), Postives = 293/522 (56.13%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMS-IRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLT------------ENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMK-----NCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE 2152 LK YQ+ G+ W+ + +LNGILADEMGLGKT+QTI+ L+YL + ++GP++++VP STL+NW E KW L+ I + G+ +ER+ + +I ++ F+V+LTT+ I ++R + K+ + + + DE H +KN S + +++ +L+LTGTPLQNN+ EL +LL+FV+P IF + N G + ++S++ TL I ++ ++L PF LRRLK V ++P K ++ +S Q I+Y+Q ++ + G++ + +M+L+K+ NH + + ED I E +D+ + GK++L LD LP G ++LIF Q ++DI+E+FL+Y I YLRLDG T +D+R + + FN D + FIL+TRAGGLG+NL +A+ VIIFD D+NP+ D QA+DR+HR+GQ +V++++LI+ +++E IL A +KL ++ Sbjct: 767 LKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKI-RAGEFDVVLTTFEYII---KERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLL-------VIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEV----------------EDQINPTRE-TNDDIWRV---------------AGKFEL-------------LDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDID 1232
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Match: STH1 (ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p [Source:SGD;Acc:S000001388]) HSP 1 Score: 293.893 bits (751), Expect = 2.353e-85 Identity = 182/517 (35.20%), Postives = 294/517 (56.87%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLK-GPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMS-IRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK------ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER----MKNCQDDAF--GVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNE-DDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE 2152 LK YQL G+ W+ ++ +LNGILADEMGLGKT+Q+I+ ++YL + GP +++VP ST+ NW E KW +L I+Y G ++R ++++I + +F+VLLTTY I +D+ + K D+ + + DE H +KN S + + ++ + +L+LTGTPLQNN+ EL +LL+FV+P IF + + F +T Q + I ++ ++L PF LRRLK +V +P K ++ LS Q LY+Q ++ + + A G+K + +M+LRK+ NH + D + ++ N++L+F GK++L LD LP F +G ++L+F Q V+DI+E+FL+ K + Y+RLDGST T++R + ++ FN D D F+L+TRAGGLG+NL +A+ VIIFD D+NP+ D QA+DR+HR+GQ +V++++LI+ +++E IL A +KL ++ Sbjct: 470 LKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQI-RVGNFDVLLTTYEYII---KDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIF-NSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVF-----DEVEGVVNPSR--------GNSDLLF-------------------RVAGKFEL-------------LDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDID 936
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Match: EDO41059 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5B2]) HSP 1 Score: 505.368 bits (1300), Expect = 8.840e-171 Identity = 270/620 (43.55%), Postives = 405/620 (65.32%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKT----IDDLKANK-ISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS-FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL +F ++ +LS I CS KA +I+ +P+K+ ++ L++ K ++ +++ C +L + ++ +L++ C +IS + E LL V + L T + +I LK YQL G+NWL ++HE+ +NGILADEMGLGKTVQ I+F+++L++ G GPH+I+VP+STLNNW +E +WC ++ +YYG+Q+ER +R I S F V++TTYN++ ED F+++L +Y VFDE HMLKNM S RY L+ + KR+LLLTGTP+QN+++EL+SLLSFVMP IF +GLK +F + S + ++ Q K+++ PF LRRLK VL ++P K + LS +Q L+ + + + N DA + + +M LR +SNH LL+R++Y D LR+++ D ++ S +L+ ED++ M DFE+H+ CL+ ++ Y L EELL S K + L+ LP +NGD++L+FSQF +V+DI+E +L++ Y RLDG T +RQ ID FN D DI +F+L+T+AGGLGINLTSANVVI+ DID+NPYND+QAEDR HR+GQ RDV V +LI+K T+++ +L+ AN KLKLE+ Sbjct: 4 ILSFFQTCSLSELSTIPECSRKKAQKILSLKPFKSWHNMVNKLESTKGLTSQILWNCDLLLKERTSVDKLMQNCNKISLKIQEL---LLEPVGLGGRLTTS---IPMAIFIRAK-SLKPYQLTGLNWLILMHEQGVNGILADEMGLGKTVQAISFIAHLIEKGDDGPHLIIVPSSTLNNWVKEFKQWCPTIRFTLYYGSQEERTYLREEILDEHSDFKVIITTYNMATGGFEDTSFLRQLRPHYVVFDEGHMLKNMQSQRYLKLTRIRAKRRLLLTGTPMQNDLLELMSLLSFVMPTIFDGRTDGLKLLFGNKKLDRDADSGYIKERAEQAKKIMKPFVLRRLKKDVLQELPQKHEHVIHCELSTSQKDLHSKLMLKCYNEYRDASKSRDYKNILMALRMMSNHPLLLRNYYKDETLREMAVKYCRDIENRGSEVDLVCEDMTVMSDFELHRLCLE-QRSLSSYVLGEELLYDSGKFERLNAMLPEMKDNGDRVLLFSQFTLVMDIIEVYLQHCGYRYFRLDGQTPVVERQPMIDNFNSDPDIFLFLLSTKAGGLGINLTSANVVILHDIDFNPYNDKQAEDRCHRVGQTRDVHVYRLIAKDTVEDNMLKCANSKLKLEK 615
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Match: EDO46669 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPD7]) HSP 1 Score: 306.22 bits (783), Expect = 1.774e-91 Identity = 189/546 (34.62%), Postives = 306/546 (56.04%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQ------SDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKE---------MLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERM--------KNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDL-SYMHDFEI--------------HQNCLKYP--HAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 L+SYQL G+ WL+ ++E +NGILADEMGLGKT+Q I +SYL++ G++GP ++ P STL NW E ++ + VI+Y+G+ ER +R +I + ++ V++T+Y I+++ D+ + +L + + + DE H +KN+ + L ++ +LLLTGTPLQNN+ EL SLL+F++P+IF N ++ F S + N+ I+Q KE +L PF LRRLK+ V +P K + PL+ Q+ YR +++ K+ ++D + + R+ N+ + D SI +++ ++ E S E+ S +D I H L+YP +YK+ EEL+ S K+ LD+ +P G KILIFSQ +LDI++++ + Y RLDGS +DR++ ID F D + +F+L+TRAGGLG+NL++A+ VII+D D+NP +D QA+DR HR+GQ + + V +L++ T+D+ I+ A K KLE++ + Sbjct: 298 LRSYQLEGVEWLKGLYENGVNGILADEMGLGKTIQCIGLVSYLIEMGVRGPFLVAAPLSTLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKAGPFETMPVVVTSYEIAMN---DQKHLFQLMWKHMIVDEGHRIKNLNCRLIRELKSYNSANRLLLTGTPLQNNLAELWSLLNFLLPDIFDDLN-SFQRWFDF---SAINDEGGNEKIIAQEKEHQVLERLHSILTPFLLRRLKTDVELSLPPKKEVLVRAPLTSKQTEFYRAALDKTILDIVGDNKDKKEDKVEISSTGRKKRKGRRNINYKIF--DDENGSI-EELAEELATLE---KSRREICTPSQKSSTYDISIKITNILMLLRKCCNHPYLLEYPLDPVTQQYKIDEELVRCSGKMLLLDQMVPALKRRGHKILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASDPEKFIFLLSTRAGGLGLNLSAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPILVYRLVTSNTVDQKIVERAASKRKLEKMVI 830
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Match: EDO48116 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK66]) HSP 1 Score: 304.294 bits (778), Expect = 3.351e-88 Identity = 187/530 (35.28%), Postives = 296/530 (55.85%), Query Frame = 2 Query: 608 ILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-------LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFN-EDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 I +QP + LK YQL G+ W+ +H NLNGILADEMGLGKT+QTIA SYL++ L GP +++VP STL+NW+ E KW + V+ Y G+ + RR + ++ FNV+LTTY + D+ + K+ + Y V DE H +KN + L +++ + ++LLTGTPLQN + EL +LL+F++P IF + + ++ F T ++ N+++ I ++ ++L PF LRRLK +V SQ+P K + +S Q ILY ++ D + K ++T+M+LRK+ NH + + HI E I E L + H + P ++ S K + LD LP N ++L+F Q ++ I+E++ +K YLRLDG+T ++DR + FN +D VF+L+TRAGGLG+NL +A+ V+IFD D+NP+ D QA+DR+HR+GQ ++V+V++L++ +++E IL A KL +++ Sbjct: 634 ITEQPSMLV-GGRLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRSAGA-VLRTGKFNVVLTTYEYVM---RDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQNRLPELWALLNFLLPTIFKSVST-FEQWFNAPFAMTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVVKCDMSILQRILYNHMYKKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQ--------------------HI---EESIAEHLGF------HGGIVTGP----------DIYRASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLLSLFNAKDSPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDE 1118
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Match: EDO40761 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S667]) HSP 1 Score: 288.5 bits (737), Expect = 2.907e-84 Identity = 185/540 (34.26%), Postives = 290/540 (53.70%), Query Frame = 2 Query: 578 IDSSLGTENLIL---DQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQ-MPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-----LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 ++ + G + IL + P+YI ++ YQ+ G+NWL ++E +NGILADEMGLGKT+QTI+ L Y+ + + GPH+++ P STL NW E +WC +++ + GNQ++R ++V +T+Y + I K KK + Y V DEAH +KN S + + + +LLLTGTPLQNN+ EL +LL+F++P++F + ++ F + KQ + ++ +L PF LRRLKS V + +P K T++ L++ Q Y + + MK+ D G L+ +M+LRK NH L F+ + Y V L+ S K++ LD+ L + G ++LIFSQ +LDI+E++ ++Q Y RLDG T ++RQ YI+ FN K +F+L+TRAGGLGINL +A++VI++D D+NP D QA DR+HR+GQ + VKV + IS+ T++E I+ A KL+L+ + + Sbjct: 119 LNQTKGAQTSILHFEESPNYIKGG-EMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICPKSTLANWMAEFERWCPSIRAVCLIGNQEQRTAFIRDTMLPGEWDVCVTSYEMVIREK---AVFKKFAWRYIVIDEAHRIKNEKSKLSEIVRELRSANRLLLTGTPLQNNLHELWALLNFLLPDVFSSSDD-FDAWFNSNNLVEEKQL------VERLHSVLRPFLLRRLKSDVEKRLLPKKETKV-YTGLTKMQRSWYTKIL--MKDI-DVVNGAGKTDKMRLLNILMQLRKCCNHPYL----------------------------------------FDGAEPGPPYTTDV-------HLIENSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLDILEDYCLWRQYDYCRLDGQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVI 596
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Match: EDO39585 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9J4]) HSP 1 Score: 282.722 bits (722), Expect = 1.821e-83 Identity = 192/550 (34.91%), Postives = 283/550 (51.45%), Query Frame = 2 Query: 617 QPHYINPSL-HLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMR-----------------YRIAQSDS--FNVLLTTYN-ISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMP------NIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYA-----LSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 QP Y++ + L YQ G+NWLR + N ILADEMGLGKT+QTI+FL L+ G +GP ++ P STL NWERE W ++ V+ Y G+++ R +R Y++ + F+VLLT+Y +SI S ++ +D+ V DEAH LKN S ++ LS++ I KLLLTGTPLQNN+ EL +LL F+ P N FLTE + + K +D+I ++ ++L P LRRLK+ VL +P K+ I + LS Q Y+ + R +A K A L+ +MEL+K NH L H L+ S G Y+ P L S K+ L + L E G ++LIFSQ +LD++E+FL+ Y R+DGS + RQ+ ID+FN F+L+TRAGGLGINL +A+ V I+D D+NP+ND QA R+HR+GQ V + + +++ +++E I ++A +K+ L + + Sbjct: 247 QPAYLDETGGKLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDFSFDEDAFKSGLKAYKLKKDSPVKFHVLLTSYELVSIDSAS----LQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIGYKLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNFLTEFDNVAK----------------EDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELSPMQKKYYKWILTR----NFEALNTKGAQQVSLLNVMMELKKCCNHPYLF-------------HAAALEAKRTQS----------------------------GGYE-PNSLTEASGKLMLLVKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVV 730
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Match: smarcad1a (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:NCBI gene;Acc:101169787]) HSP 1 Score: 556.599 bits (1433), Expect = 0.000e+0 Identity = 297/621 (47.83%), Postives = 423/621 (68.12%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDL-----KANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQS-DSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVM-ELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 IL +F +++D+L+ I+GCS KA RI++ RP+ + L K N +S++L+ GC +L ++ ++ L+ KC IS +++++ ++ + GT ++ QP +N LK YQLIG+ WL ++HE NL+GILADEMGLGKT+Q IAFL+ L ++G+ GPH+I+VP STL+NW REL WC +L+V++YYG+ DERR +++ I + FNV++TTYN++I + DR +KL Y VFDE HMLKNM S+RY++L + K +LLLTGTPLQNN++EL+SLL+F+MP++F + L K+F M KS QS F D+ISQ K ++ PF LRR+KS+VL Q+P K + P+SE Q LY+ +++K G K LS VM +LRK++NH LL R +YT L+ +S ML + H ++ LI ED+ M DFE+H+ C ++ ++ Y+L L+L S K +L + L GD++++FSQF M+LDIVE LK+ Q Y+RLDGST DR ID++N D DI VF+L+TRAGGLGINLT+ANVVI+ DID NPYND+QAEDR HR+GQ R V+VIKLISK TI++CIL++ +KLKLEQ Sbjct: 420 ILQFFQDASIDELTLISGCSIKKAQRIVELRPFDNWEMLCDVFHKGNGLSEELLLGCKVVLKERKVVLGLMSKCQSISKRMVKQVTEVMEN-------GTASM--HQPSVLNNQFKLKPYQLIGLKWLLLLHEHNLSGILADEMGLGKTIQAIAFLAKLFETGIDGPHLIIVPASTLDNWVRELKLWCPSLEVLIYYGSVDERRYLKHEILNNYVQFNVIVTTYNLAIGNDSDRSLFRKLPLVYAVFDEGHMLKNMNSLRYRHLMSINAKHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQLSKMFSM--KSHEDQSRFERDRISQAKRIMKPFILRRVKSEVLQQLPAKEETVEFCPMSEKQIPLYQNLFKKLKTA---VIGEKRELSNVMMQLRKMANHPLLHRQYYTKEKLKAMSKLMLKEPTHFDADAALIQEDMEVMSDFELHRLCQQF-SSISSYQLDIGLVLDSGKFHHLTKLLATLKSKGDRVVLFSQFTMMLDIVEVLLKHLQHRYVRLDGSTPIADRIVLIDEYNTDPDIFVFLLSTRAGGLGINLTTANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVQVIKLISKDTIEDCILQLGQKKLKLEQ 1025
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Match: hells (helicase, lymphoid specific [Source:NCBI gene;Acc:101164497]) HSP 1 Score: 322.783 bits (826), Expect = 3.298e-98 Identity = 188/552 (34.06%), Postives = 310/552 (56.16%), Query Frame = 2 Query: 581 DSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIF--LTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILY----RQTIERMKNCQDDAFGV------KYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPH--------AVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 D + + + + QP + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ ++ V++Y+G Q ER ++ +I + V++T++ IS+ DR F+++ + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P +F L E I + + +LK S + +S + ++L PF LRRLKS V ++P K + PL+ Q + Y ++I +M + + K V++ R + + + Y + + ++ ++ I ++++ +L + + + C +P+ A ++K+ EEL+ S K LD LP + G K+LIFSQ +LDI+ ++ + + Y RLDGS S +R + I +F++D ++ +F+L+TRAGGLGINLT+A+ VIIFD D+NP D QA+DR HR+GQ + V V +L++ TID+ IL A K KLEQ+ + Sbjct: 166 DRKVDGQPVPVQQPQLFTGGI-MRWYQIEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMIEKTVMGPFLVVAPLSTLPNWINEFKRFTPDVSVLLYHGPQPERAKLLKQIRRPQGPLNMCPVVITSFEISMI---DRKFLQRFQWKYLIVDEGHRIKNLNCRLVRELKTLPTDNKLLLTGTPLQNNLAELWSLLNFLLPEVFDDLKSFESWFDINSLGEPESLKVSEREQNILSMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTPKQELFYTAVVNKSIAKMLGQEKAPVALTPSGRPKRRSRRVVDYRDTHDDTPFALEKYLERVQKEAEQRSASSKNTIPLDSQI---NLKLQNVLMLLKRCCNHPYLVEYPLDPATQEFKIDEELVQSSGKFLILDRLLPELKKRGHKVLIFSQMTSILDILMDYCYLRSLQYSRLDGSMSYAERDENISKFSKDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLVTANTIDQKILERATAKRKLEQMVI 710
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Match: hells (helicase, lymphoid specific [Source:NCBI gene;Acc:101164497]) HSP 1 Score: 323.553 bits (828), Expect = 5.414e-98 Identity = 190/552 (34.42%), Postives = 308/552 (55.80%), Query Frame = 2 Query: 581 DSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDS----FNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIF--LTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER--MKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFE--------DLSYMHDFEIHQNCLKYPH--------AVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 D + + + + QP + ++ YQ+ GI WLR++ E +NGILADEMGLGKT+Q IA ++ +++ + GP ++V P STL NW E ++ ++ V++Y+G Q ER ++ +I + V++T++ IS+ DR F+++ + Y + DE H +KN+ + L KLLLTGTPLQNN+ EL SLL+F++P +F L E I + + +LK S + +S + ++L PF LRRLKS V ++P K + PL+ Q + Y + + K + AL+ ++ S + RD + D+ + + ++ S+T ++ +L + + + C +P+ A ++K+ EEL+ S K LD LP + G K+LIFSQ +LDI+ ++ + + Y RLDGS S +R + I +F++D ++ +F+L+TRAGGLGINLT+A+ VIIFD D+NP D QA+DR HR+GQ + V V +L++ TID+ IL A K KLEQ+ + Sbjct: 218 DRKVDGQPVPVQQPQLFTGGI-MRWYQIEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMIEKTVMGPFLVVAPLSTLPNWINEFKRFTPDVSVLLYHGPQPERAKLLKQIRRPQGPLNMCPVVITSFEISMI---DRKFLQRFQWKYLIVDEGHRIKNLNCRLVRELKTLPTDNKLLLTGTPLQNNLAELWSLLNFLLPEVFDDLKSFESWFDINSLGEPESLKVSEREQNILSMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTPKQELFYTAVVNKSIAKMLGQEKTEAPVALTPSGRPKRRSRRVVDYRDTHDDTPFALEKYLERVQKEAEQSSTPVLNAQSPLDSQINLKLQNVLMLLKRCCNHPYLVEYPLDPATQEFKIDEELVQSSGKFLILDRLLPELKKRGHKVLIFSQMTSILDILMDYCYLRSLQYSRLDGSMSYAERDENISKFSKDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVYRLVTANTIDQKILERATAKRKLEQMVI 765
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Match: ENSORLT00000025786.2 (probable global transcription activator SNF2L2 [Source:NCBI gene;Acc:101161713]) HSP 1 Score: 303.908 bits (777), Expect = 5.097e-88 Identity = 185/516 (35.85%), Postives = 291/516 (56.40%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQT------IERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQ+ G+ W+ ++ NLNGILADEMGLGKT+QTIA ++YL++ L GP++I+VP STL+NW EL KW ++ I Y G RR + ++ +S FNVLLTTY I +D+ + K+ + Y + DE H +KN + L +++ R+LLLTGTPLQN + EL +LL+F++P IF + + ++ F T ++ N+++ I ++ ++L PF LRRLK +V SQ+P K + +S Q +LYR + + + G K ++T+M+L+K+ NH + + H E L YP+ + +L S K + LD LP G ++L+F Q ++ I+E++ Y+ YLRLDG+T ++DR + +FNE+ +F+L+TRAGGLG+NL +A+ V+IFD D+NP+ D QA+DR+HR+GQ +V+V++L S +++E IL A KL ++Q Sbjct: 676 LKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQL-RSGKFNVLLTTYEYII---KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCST-FEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYM------------------------------------FQHIEESFAEHLGYPNGIISGP---DLYRASGKFELLDRILPKLHATGHRVLLFCQMTTLMTIMEDYFGYRNFLYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCSVNSVEEKILAAAKYKLNVDQ 1147
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Match: ENSORLT00000039803.1 (probable global transcription activator SNF2L2 [Source:NCBI gene;Acc:101161713]) HSP 1 Score: 303.523 bits (776), Expect = 1.899e-87 Identity = 186/516 (36.05%), Postives = 292/516 (56.59%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSG-LKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYL-SNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQT------IERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQ+ G+ W+ ++ NLNGILADEMGLGKT+QTIA ++YL++ L GP++I+VP STL+NW EL KW ++ I Y G RR + ++ +S FNVLLTTY I +D+ + K+ + Y + DE H +KN + L +++ R+LLLTGTPLQN + EL +LL+F++P IF + + ++ F T ++ N+++ I ++ ++L PF LRRLK +V SQ+P K + +S Q +LYR + + + G K ++T+M+L+K+ NH + + H E L YP+ + P +L S K + LD LP G ++L+F Q ++ I+E++ Y+ YLRLDG+T ++DR + +FNE+ +F+L+TRAGGLG+NL +A+ V+IFD D+NP+ D QA+DR+HR+GQ +V+V++L S +++E IL A KL ++Q Sbjct: 738 LKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQL-RSGKFNVLLTTYEYII---KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCST-FEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYM------------------------------------FQHIEESFAEHLGYPNGI--ISGP-DLYRASGKFELLDRILPKLHATGHRVLLFCQMTTLMTIMEDYFGYRNFLYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCSVNSVEEKILAAAKYKLNVDQ 1209
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Match: SMESG000061650.1 (SMESG000061650.1) HSP 1 Score: 1404.81 bits (3635), Expect = 0.000e+0 Identity = 726/731 (99.32%), Postives = 728/731 (99.59%), Query Frame = 2 Query: 68 MTKNDSSNYSKTFKRTCIMDDFVIKRPRLENKDNDENVLDDSYISDKVIAKKRANLLXXXXXXXXXXQYHEESNSMKLDEINILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMTYXXXXXXXXXXXXXXXXXXXFGSLLKQAMDI 2260 MTKNDSSNYSKTFKRTCI+DDFVIKRPRLENKDNDENVLDDSYISDKVIAKKRANLLDSSDSEVSDDQYHEESNSMKLDEINILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWC NLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKI+QIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQS LYRQTIERMKNCQDDAFG KYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMTYDIDNDDESKSSSSEPKDVDFGSLLKQAMDI Sbjct: 1 MTKNDSSNYSKTFKRTCILDDFVIKRPRLENKDNDENVLDDSYISDKVIAKKRANLLDSSDSEVSDDQYHEESNSMKLDEINILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLKANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVSVDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCPNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKINQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSTLYRQTIERMKNCQDDAFGGKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITMTYDIDNDDESKSSSSEPKDVDFGSLLKQAMDI 731
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Match: SMESG000061158.1 (SMESG000061158.1) HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0 Identity = 297/627 (47.37%), Postives = 440/627 (70.18%), Query Frame = 2 Query: 314 ILDYFNKSTVDDLSQITGCSEIKALRIMKDRPYKTIDDLK-----ANKISQKLIDGCLEILVIKQNLIELLKKCVQISANLLERIRPLLVS--VDIDSSLGTENLILDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLDSGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRI--AQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLK----QSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKN-CQDDAFGVKYALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLE 2152 L +FN+ TV +LS + GCS A +I P+ I+DL +N +++ I C E+L ++ +L+ KC Q + + I L + +++ S++ ++NLI + P+ +NP+L LK +QL+G+NWL ++++E +NGIL+DE GLGKTVQTI+FL++LLD G +GPH+I+VP S++++WE EL WC +K+I+Y+G+QDER+ +R +I Q FN+LLTTYNIS + EDR +K+++F+YG+FD+A MLKNMMS RYK L NFK+KR+LLLTG P QNN++ELISLLSF+MP++FL + LKKIFQM+ K + S F+++KI Q K +L PFC+RRL+ +L Q+ KTT+ L L++ Q +LY + ++ D+ +Y + +M+LRKL NH LL+R+HYT+ +L+ IS+D+L D H ++N E I EDLS M+DF+IH C Y HA+GK+ L E++L++SNK QYLD+ LP F+ G ++LIFSQ M++D++E +L + +YLRLD T DR+D ++FN+DD IK+FIL+T+ GINL A+ VII D+D+NP N+R AED H LGQ ++V++IKLISK TI+E IL IAN K+K++ Sbjct: 448 FLKFFNQCTVHELSLMPGCSMKIAEKICSQGPFLNINDLNIKIKNSNIVNENFIQNCHEVLNMRNMFSKLIVKCEQFVSKVENTIDKHLENNYLELSSNVESKNLITEIPNNLNPNLKLKPFQLVGLNWLNLLYKEKINGILSDESGLGKTVQTISFLAHLLDLGDQGPHLIIVPNSSISHWESELKLWCPQMKLIIYHGSQDERKSIRLKIYDGQHSDFNILLTTYNISTGTMEDRAMMKRVNFHYGIFDDAQMLKNMMSNRYKNLINFKVKRRLLLTGLPFQNNLLELISLLSFLMPDMFLPHADFLKKIFQMNNKRKDEFGNILSEFDNEKIEQTKNLLKPFCIRRLRENILYQLSAKTTDYVFLNLTQYQKMLYTNVVTAIRQETSDERRNSQYQM--IMDLRKLCNHPLLLRNHYTNELLQSISNDLLQDTSHESANPESICEDLSTMNDFQIHITCQLYSHAIGKFSLGEQILVQSNKFQYLDKYLPDFMLQGHRVLIFSQIAMMIDVLEAYLNLNKYSYLRLDEQTPVCDRKDLAEKFNKDDSIKIFILSTKGECSGINLIGADTVIIHDVDFNPANNRLAEDMCHTLGQTKNVRIIKLISKDTIEETILSIANSKIKMD 1072
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Match: SMESG000076666.1 (SMESG000076666.1) HSP 1 Score: 302.753 bits (774), Expect = 1.447e-87 Identity = 189/518 (36.49%), Postives = 299/518 (57.72%), Query Frame = 2 Query: 647 LKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKR-KLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDK----ISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIER---MKNCQDDAFGVKYAL--STVMELRKLSNHSLL---VRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNE-DDDIKVFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQ 2155 LK YQL G+ WL ++ NLNGILADEMGLGKT+QTI ++YL++ + GP +I+VP ST++NW E KW ++K I+Y G+ R+ ++ ++ S FNVLLTTY I +D+ + K+ + Y + DE H +KN + L+ F I +LLLTGTPLQN + EL +LL+F++PNIF + N ++ F S+ ++ N ++ I ++ ++L PF LRRLK +V +Q+P K + +S Q +Y + +K+ D G L + +M+LRK+ NH + V Y + M + + N + E +H ++++ A GK++L LD LP ++L+F Q ++D++E +L+Y+ YLRLDG+T ++DR D + FN+ + + +F+L+TRAGGLG+NL SA+ VIIFD D+NP+ D QA+DR+HR+GQ +V+V++LI +I+E IL A KL +++ Sbjct: 548 LKQYQLKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMERKKVNGPFLIIVPLSTMSNWAMEFEKWGPSVKKILYKGSPKIRKELQAQLKTS-KFNVLLTTYEYII---KDKSSLSKVKWKYMIIDEGHRMKNHHCKLTQILNTFYIAPYRLLLTGTPLQNKLPELWALLNFLLPNIFKSVN-TFEQWFNAPFASSGEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVENQLPEKVEYVIKCEMSALQRKVYSNIQSKRAILKSVDKDKKGRTERLWSNVLMQLRKICNHPYMFPEVEIEYAKHVF------MKMHNGNPPPNVPIPKE----IHGADLYR-------ASGKFEL-------------LDRILPKLKRAKHRVLMFCQMTHLMDLMEPYLEYRCFKYLRLDGTTKSEDRGDLLCAFNKPNSEFFIFMLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLIMINSIEEKILAAARFKLNVDE 1030
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Match: SMESG000013560.1 (SMESG000013560.1) HSP 1 Score: 290.041 bits (741), Expect = 7.954e-85 Identity = 187/524 (35.69%), Postives = 293/524 (55.92%), Query Frame = 2 Query: 611 LDQPHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRR-MRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVK---YALSTVMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 +Q Y ++ YQ+ G+NWL ++ + NGILADEMGLGKT+QTI+ + YL L GPH+I+ P STL NW E +W ++K I G+Q+ R R +R +I D ++V++T+Y + I K +KK ++ Y DEAH +KN S + + FK + +LL+TGTPLQNN+ EL +LL+F+MP +F + + +F + ++L++ + + ++ +L PF LRR+K+ V ++P K + LS Q LY + + + + + A G L+ +M+LRK +NH L D I Y D+ + +NC K+ LD+ L E G +IL+FSQ +LDI+E++ +++ Y RLDGST D+RQ ID++N+ K +F+L+TRAGGLGINL +A+VVI++D D+NP D QA+DR+HR+GQ + V+V +LI++ T++E I+ A KLKL+ I + Sbjct: 75 FEQSPYFVIGGEMRDYQVRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWAPSVKPICLIGDQETRSRVIREQILPQD-WDVIVTSYEMCIKEKST---LKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFAS-SANFDDLFNI---NSLEEETL----VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLF--------------------DGIEPGP-------PYTTDYHLVENC--------------------GKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVI 539
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Match: SMESG000017699.1 (SMESG000017699.1) HSP 1 Score: 288.115 bits (736), Expect = 3.234e-84 Identity = 186/522 (35.63%), Postives = 284/522 (54.41%), Query Frame = 2 Query: 620 PHYINPSLHLKSYQLIGINWLRIVHEENLNGILADEMGLGKTVQTIAFLSYLLD-SGLKGPHIIVVPTSTLNNWERELHKWCLNLKVIVYYGNQDERRRMRYRIAQSDSFNVLLTTYNISISSKEDRLFIKKLDFYYGVFDEAHMLKNMMSIRYKYLSNFKIKRKLLLTGTPLQNNMVELISLLSFVMPNIFLTENEGLKKIFQMSQKSTLKQSSFNDDKISQIKEMLAPFCLRRLKSQVLSQMPLKTTEIALLPLSEAQSILYRQTIERMKNCQDDAFGVKYALST-----VMELRKLSNHSLLVRDHYTDSILRKISHDMLLDEDHITSNTELIFEDLSYMHDFEIHQNCLKYPHAVGKYKLPEELLLKSNKIQYLDENLPIFIENGDKILIFSQFIMVLDIVEEFLKYKQITYLRLDGSTSTDDRQDYIDQFNEDDDIK-VFILTTRAGGLGINLTSANVVIIFDIDYNPYNDRQAEDRSHRLGQMRDVKVIKLISKGTIDECILRIANEKLKLEQITM 2164 P Y++ ++ YQ+ G+NW+ ++ N NGILADEMGLGKT+QTI+ + YL SG KG I++ P STL NW E+++W +L I G+Q R + +++ Q+ ++VL+TTY + I K IKK ++ Y DEAH +KN S + + F + +LL+TGTPLQNN+ EL +LL+F+MP+ F + ++ ++F + + Q + ++ +L P+ LRRLK V ++P K + LS Q LY + + MK+ K T +M+LRK +NH L D I Y D+ + NC K+ LD+ L G ++L+F+Q +LDI+E++ +++ Y RLDG T DRQ ID +N + K +F+L+TRAGGLGINLTSA+VVII+D D+NP D QA+DR+HR+GQ + V+V +LI++ T++E I+ A KLKL+ I + Sbjct: 67 PWYVSGG-EMRDYQIRGLNWMIQLYLSNNNGILADEMGLGKTLQTISMIGYLKHFSGKKGHFIVITPKSTLQNWVNEINRWAPSLTSISLIGDQQARHEIIHQL-QTKQWDVLVTTYEMCIKEKS---AIKKYNYVYLAIDEAHRIKNENSKLSEIVREFNSEHRLLITGTPLQNNLHELWALLNFLMPDEF-SSSDNFDELFNNDKMAEQNQ-------VQKLHSILKPYLLRRLKIDVEKKLPPKKEIKVYIGLSAIQRELYTKIL--MKDLDTLNSTAKKVEKTRLQNILMQLRKCTNHPYLF--------------------DGIEPGP-------PYTTDYHLVANC--------------------GKMILLDKLLSRLKAEGSRVLVFTQMTRMLDILEDYCRWRGHEYCRLDGQTQHSDRQISIDDYNSPNSTKFLFMLSTRAGGLGINLTSADVVIIYDSDWNPQVDLQAQDRAHRIGQKKTVRVFRLITENTVEERIIGRAEMKLKLDNIVI 526 The following BLAST results are available for this feature:
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005925 ID=SMED30005925|Name=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2316bpback to top protein sequence of SMED30005925-orf-1 >SMED30005925-orf-1 ID=SMED30005925-orf-1|Name=SMED30005925-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=732bp MTKNDSSNYSKTFKRTCIMDDFVIKRPRLENKDNDENVLDDSYISDKVIAback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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