RanBP-type and C3HC4-type zinc finger containing 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005885 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Match: RBCK1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:HGNC:15864]) HSP 1 Score: 157.918 bits (398), Expect = 2.209e-42 Identity = 88/242 (36.36%), Postives = 137/242 (56.61%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+L+ ++ N E C +C ++ G V LR C H FCR CL +I+ S V C ++N C+ K+ +REI +L D + + +++A+++ A +HCKTPDCK + + D+ F CP+C +NC++C IH C+EYQ + + + ++ +Q G M+C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 225 QLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHE-QMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 465 HSP 2 Score: 56.6102 bits (135), Expect = 6.077e-8 Identity = 40/149 (26.85%), Postives = 70/149 (46.98%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKAL-----PDN--RITDYEF-MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D S + ++ + + P++ R D ++ ++ Y C P C F+ D +F C VC NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 245 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 393
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Match: RBCK1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:HGNC:15864]) HSP 1 Score: 158.688 bits (400), Expect = 2.845e-42 Identity = 88/242 (36.36%), Postives = 137/242 (56.61%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+L+ ++ N E C +C ++ G V LR C H FCR CL +I+ S V C ++N C+ K+ +REI +L D + + +++A+++ A +HCKTPDCK + + D+ F CP+C +NC++C IH C+EYQ + + + ++ +Q G M+C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 267 QLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHE-QMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 507 HSP 2 Score: 56.225 bits (134), Expect = 8.502e-8 Identity = 40/149 (26.85%), Postives = 70/149 (46.98%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKAL-----PDN--RITDYEF-MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D S + ++ + + P++ R D ++ ++ Y C P C F+ D +F C VC NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 287 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 435
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Match: RBCK1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:HGNC:15864]) HSP 1 Score: 130.183 bits (326), Expect = 2.928e-33 Identity = 75/203 (36.95%), Postives = 117/203 (57.64%), Query Frame = 2
Query: 764 RNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
R CL +I+ S V C ++N C+ K+ +REI +L D + + +++A+++ A +HCKTPDCK + + D+ F CP+C +NC++C IH C+EYQ + + + ++ +Q G M+C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 136 RECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHE-QMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 337 HSP 2 Score: 50.447 bits (119), Expect = 3.588e-6 Identity = 32/128 (25.00%), Postives = 62/128 (48.44%), Query Frame = 2
Query: 215 CLATYIESNLESKICCPMNDCHISINDGIIRKAL-----PDN--RITDYEF-MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
CL I ++ E+++ CP D S + ++ + + P++ R D ++ ++ Y C P C F+ D +F C VC NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 138 CLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 265
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Match: RBCK1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:HGNC:15864]) HSP 1 Score: 130.183 bits (326), Expect = 2.928e-33 Identity = 75/203 (36.95%), Postives = 117/203 (57.64%), Query Frame = 2
Query: 764 RNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
R CL +I+ S V C ++N C+ K+ +REI +L D + + +++A+++ A +HCKTPDCK + + D+ F CP+C +NC++C IH C+EYQ + + + ++ +Q G M+C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 136 RECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHE-QMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 337 HSP 2 Score: 50.447 bits (119), Expect = 3.588e-6 Identity = 32/128 (25.00%), Postives = 62/128 (48.44%), Query Frame = 2
Query: 215 CLATYIESNLESKICCPMNDCHISINDGIIRKAL-----PDN--RITDYEF-MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
CL I ++ E+++ CP D S + ++ + + P++ R D ++ ++ Y C P C F+ D +F C VC NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 138 CLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 265
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Match: ARIH2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:690]) HSP 1 Score: 55.4546 bits (132), Expect = 1.600e-7 Identity = 55/239 (23.01%), Postives = 98/239 (41.00%), Query Frame = 2
Query: 563 EIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNES----IKTSATIPVQCLNNECNAKIQDREIHEIL-NERDSEILNEKCLTLAKSKLANIFHCKTPDCKY-FGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ--LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
EI+D+ K + +L++ R Q S + + C +C + + K + + L C H FCR+C + +K + V C+ +C + + + +L NE E + C DC + +P + C C+ + C C +++ C + L+K A D + YI + + C C I+K+GGCN M+C +CK + CW+
Sbjct: 104 EILDRY-KSNSAQLLVEAR-------VQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTK---CADDSETANYI-----SAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWM 325
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 59.3066 bits (142), Expect = 4.173e-9 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSAT---IPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKL--ANIFHCKTPDCKYFGICD-----PDLKSFIC--PICHSLNCIICNVIHNGSQTCEEYQLSKGNYS---AVDD-MSIKY---IENEIQAGNCMKCVACGCLIKK--SGGCNWMKCPQCKLELCWI 1255
C +C +P + KL+ C H CR CL + ++ S T + V C EC++ + +I ++ + + I + +L + + A+ C PDC + I P LK C P C +L C C + +QTC+E + + S A ++ M + ++ ++ G+ C C I K G CN M C C E CW+
Sbjct: 55 CPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPC--PECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLK---CQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWL 258
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 59.3066 bits (142), Expect = 4.173e-9 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSAT---IPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKL--ANIFHCKTPDCKYFGICD-----PDLKSFIC--PICHSLNCIICNVIHNGSQTCEEYQLSKGNYS---AVDD-MSIKY---IENEIQAGNCMKCVACGCLIKK--SGGCNWMKCPQCKLELCWI 1255
C +C +P + KL+ C H CR CL + ++ S T + V C EC++ + +I ++ + + I + +L + + A+ C PDC + I P LK C P C +L C C + +QTC+E + + S A ++ M + ++ ++ G+ C C I K G CN M C C E CW+
Sbjct: 55 CPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPC--PECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLK---CQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWL 258
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 59.3066 bits (142), Expect = 4.706e-9 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSAT---IPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKL--ANIFHCKTPDCKYFGICD-----PDLKSFIC--PICHSLNCIICNVIHNGSQTCEEYQLSKGNYS---AVDD-MSIKY---IENEIQAGNCMKCVACGCLIKK--SGGCNWMKCPQCKLELCWI 1255
C +C +P + KL+ C H CR CL + ++ S T + V C EC++ + +I ++ + + I + +L + + A+ C PDC + I P LK C P C +L C C + +QTC+E + + S A ++ M + ++ ++ G+ C C I K G CN M C C E CW+
Sbjct: 85 CPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPC--PECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLK---CQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWL 288
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 59.3066 bits (142), Expect = 4.706e-9 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSAT---IPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKL--ANIFHCKTPDCKYFGICD-----PDLKSFIC--PICHSLNCIICNVIHNGSQTCEEYQLSKGNYS---AVDD-MSIKY---IENEIQAGNCMKCVACGCLIKK--SGGCNWMKCPQCKLELCWI 1255
C +C +P + KL+ C H CR CL + ++ S T + V C EC++ + +I ++ + + I + +L + + A+ C PDC + I P LK C P C +L C C + +QTC+E + + S A ++ M + ++ ++ G+ C C I K G CN M C C E CW+
Sbjct: 85 CPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPC--PECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLK---CQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWL 288
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 59.3066 bits (142), Expect = 4.795e-9 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSAT---IPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKL--ANIFHCKTPDCKYFGICD-----PDLKSFIC--PICHSLNCIICNVIHNGSQTCEEYQLSKGNYS---AVDD-MSIKY---IENEIQAGNCMKCVACGCLIKK--SGGCNWMKCPQCKLELCWI 1255
C +C +P + KL+ C H CR CL + ++ S T + V C EC++ + +I ++ + + I + +L + + A+ C PDC + I P LK C P C +L C C + +QTC+E + + S A ++ M + ++ ++ G+ C C I K G CN M C C E CW+
Sbjct: 85 CPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPC--PECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLK---CQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWL 288
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331216) HSP 1 Score: 51.2174 bits (121), Expect = 2.217e-6 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQC-------LNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICD------PDLKSFICPICHSLNCIICNVI----HNGSQTCEEY-QLSKGNYSAVDDMSIKYIENEIQAG-NCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
C +C P V + C H C+ C I + C L+NE + + E L+ IL+ L + KL + + P+ K+ C P K ICP C S+ C C H GS +CE Y + + N + ++ E+ Q G +C KC L + GGC C QCK E C+
Sbjct: 2514 CELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-SCEAYLEWKRENDPELQAQGVQ--EHLAQNGIDCPKCKFRYSLAR--GGCMHFTCTQCKFEFCY 2718
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331221) HSP 1 Score: 50.8322 bits (120), Expect = 2.671e-6 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQC-------LNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICD------PDLKSFICPICHSLNCIICNVI----HNGSQTCEEY-QLSKGNYSAVDDMSIKYIENEIQAG-NCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
C +C P V + C H C+ C I + C L+NE + + E L+ IL+ L + KL + + P+ K+ C P K ICP C S+ C C H GS +CE Y + + N + ++ E+ Q G +C KC L + GGC C QCK E C+
Sbjct: 2420 CELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-SCEAYLEWKRENDPELQAQGVQ--EHLAQNGIDCPKCKFRYSLAR--GGCMHFTCTQCKFEFCY 2624
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331220) HSP 1 Score: 50.8322 bits (120), Expect = 2.791e-6 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQC-------LNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICD------PDLKSFICPICHSLNCIICNVI----HNGSQTCEEY-QLSKGNYSAVDDMSIKYIENEIQAG-NCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
C +C P V + C H C+ C I + C L+NE + + E L+ IL+ L + KL + + P+ K+ C P K ICP C S+ C C H GS +CE Y + + N + ++ E+ Q G +C KC L + GGC C QCK E C+
Sbjct: 2461 CELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-SCEAYLEWKRENDPELQAQGVQ--EHLAQNGIDCPKCKFRYSLAR--GGCMHFTCTQCKFEFCY 2665
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331218) HSP 1 Score: 50.8322 bits (120), Expect = 2.792e-6 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQC-------LNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICD------PDLKSFICPICHSLNCIICNVI----HNGSQTCEEY-QLSKGNYSAVDDMSIKYIENEIQAG-NCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
C +C P V + C H C+ C I + C L+NE + + E L+ IL+ L + KL + + P+ K+ C P K ICP C S+ C C H GS +CE Y + + N + ++ E+ Q G +C KC L + GGC C QCK E C+
Sbjct: 2473 CELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-SCEAYLEWKRENDPELQAQGVQ--EHLAQNGIDCPKCKFRYSLAR--GGCMHFTCTQCKFEFCY 2677
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Match: shrprbck1r (sharpin and rbck1 related [Source:NCBI gene;Acc:569903]) HSP 1 Score: 174.866 bits (442), Expect = 3.025e-47 Identity = 104/356 (29.21%), Postives = 169/356 (47.47%), Query Frame = 2
Query: 323 NRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQ--FECSVCSMFNCISCEATHP---FLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK----YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
N E + LS + LP + +IQ + C C+ N + T P + R + + E I + E R + + + +++ ++PN E C IC + G GV LR C H FC+ CL I S V C + C+ +Q+REI +++ D + ++ L++A+S+ +HC T DC + + + + +F CP+C NC++C IH G C++YQ A++D + + ++ + +G M C CG +++K GC+W++C C E+CW+ + PRWGPKG GD SGGCRC VNK+ CHP C+
Sbjct: 362 NNAGGSERLGLSDIRDLINLELPQLNEALGPNRTSIQPGWACPTCTYIN----KPTRPGCEMCSADRPEGYTVPGNYRPDALELRRIQQEKEAIRQYQQARETERRENFARLVQMDGQDLVPNPERVECRICYVELESGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDESYACDCVLQEREIRALVSVDDYQHWLQRGLSVAESRCEGSYHCATADCPGWCVYEDTVNTFHCPVCKKQNCLLCKAIHEG-MNCKQYQ-DDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCGIIVQKKEGCDWLRCTVCHTEICWVTRGPRWGPKGPGDISGGCRCNVNKQRCHPKCQ 711 HSP 2 Score: 51.2174 bits (121), Expect = 2.242e-6 Identity = 39/131 (29.77%), Postives = 58/131 (44.27%), Query Frame = 2
Query: 158 DLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEF-------MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
+LE E LR C H C CL + I + + ++ CP D C + + IR + + DY+ ++ S+ E Y C C Y D F C VC NC+ C+A H +NC++YQ
Sbjct: 492 ELESGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDESYACDCVLQEREIRALV---SVDDYQHWLQRGLSVAESRCEGSYHCATADCPGWCVYEDTVNTFHCPVCKKQNCLLCKAIHEGMNCKQYQ 619
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Match: rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]) HSP 1 Score: 168.318 bits (425), Expect = 5.416e-46 Identity = 90/249 (36.14%), Postives = 132/249 (53.01%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE-----------CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+ ++ ++ N + C IC I G G LR C H FCR+CL ++ V CL+ E CN K+QDREI +L + + + E L +A+S+ N +HCKTPDC + I + D+ F C IC+ NC++C IH G C+EYQ + + + ++ ++ G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGC+C VN CHP C+
Sbjct: 272 QTDAHSLVGNTDQLECAICFGTIMPGEGAVLRECLHSFCRDCLKGTV-------VNCLDAEVCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKG-MNCKEYQDDLRVRAQNDEAARQTTEMLDQLLKNGEAMNCPKCQVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGAGDTSGGCKCRVNGVLCHPQCQ 512 HSP 2 Score: 63.5438 bits (153), Expect = 2.423e-10 Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 2
Query: 191 CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSL----SKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMDK 577
C H C CL + + L++++CCP D C+ + D I+ L + + + L S+ E Y C P C + D +F+C +C+ NC+ C+A H +NC+ YQ +++ A + ++ E++D+
Sbjct: 305 CLHSFCRDCLKGTVVNCLDAEVCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKGMNCKEYQDDLRVRAQNDEAARQTTEMLDQ 442
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Match: rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]) HSP 1 Score: 168.318 bits (425), Expect = 5.416e-46 Identity = 90/249 (36.14%), Postives = 132/249 (53.01%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE-----------CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+ ++ ++ N + C IC I G G LR C H FCR+CL ++ V CL+ E CN K+QDREI +L + + + E L +A+S+ N +HCKTPDC + I + D+ F C IC+ NC++C IH G C+EYQ + + + ++ ++ G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGC+C VN CHP C+
Sbjct: 272 QTDAHSLVGNTDQLECAICFGTIMPGEGAVLRECLHSFCRDCLKGTV-------VNCLDAEVCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKG-MNCKEYQDDLRVRAQNDEAARQTTEMLDQLLKNGEAMNCPKCQVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGAGDTSGGCKCRVNGVLCHPQCQ 512 HSP 2 Score: 63.5438 bits (153), Expect = 2.423e-10 Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 2
Query: 191 CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSL----SKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMDK 577
C H C CL + + L++++CCP D C+ + D I+ L + + + L S+ E Y C P C + D +F+C +C+ NC+ C+A H +NC+ YQ +++ A + ++ E++D+
Sbjct: 305 CLHSFCRDCLKGTVVNCLDAEVCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKGMNCKEYQDDLRVRAQNDEAARQTTEMLDQ 442
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Match: rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]) HSP 1 Score: 127.872 bits (320), Expect = 1.919e-34 Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 2
Query: 854 EIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTC 1348
+ ++L + + + E L +A+S+ N +HCKTPDC + I + D+ F C IC+ NC++C IH G C+EYQ + + + ++ ++ G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGC+C VN CHP C
Sbjct: 7 QYEQLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKG-MNCKEYQDDLRVRAQNDEAARQTTEMLDQLLKNGEAMNCPKCQVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGAGDTSGGCKCRVNGVLCHPQC 173 HSP 2 Score: 49.2914 bits (116), Expect = 1.640e-6 Identity = 22/78 (28.21%), Postives = 43/78 (55.13%), Query Frame = 2
Query: 347 MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMDK 577
++ S+ E Y C P C + D +F+C +C+ NC+ C+A H +NC+ YQ +++ A + ++ E++D+
Sbjct: 27 IAESRSENSYHCKTPDCAGWCIFEDDVNEFKCDICNETNCLLCKAIHKGMNCKEYQDDLRVRAQNDEAARQTTEMLDQ 104
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Match: zmp:0000000524 (zmp:0000000524 [Source:ZFIN;Acc:ZDB-GENE-130530-527]) HSP 1 Score: 70.8626 bits (172), Expect = 8.770e-13 Identity = 52/213 (24.41%), Postives = 88/213 (41.31%), Query Frame = 2
Query: 683 TFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSI----KYIENEIQA---------------GNCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
F C IC S V C H++C+ C+ + IK + C EC + ++ ++++ D + L + + + ++ +C C + +PD ICP C + C CN ++G C+E +L + + + + + IE E Q NC +C ACG I++ GGCN M C C+ CW
Sbjct: 160 VFNCGICFTENLGSSFVLFNECQHVYCKTCVRDYFEIQIKDGKVQFLSCPEAECTSLATPAQVKLLVSQEDFARYDRLLLQWSLNLMTDVVYCPRVSCCMAVMLEPDRTVGICPSCRFVFCTTCNRTYHGLSICKEIELRRLKEAREKEQKLIEEKERIEYEKQLEEIEMEDTSSDDWLIKNCKRCPACGTNIQRIGGCNKMICSCCRQYFCW 372
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Match: ENSXETT00000033448.1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:NCBI gene;Acc:100491300]) HSP 1 Score: 185.652 bits (470), Expect = 1.455e-54 Identity = 88/242 (36.36%), Postives = 138/242 (57.02%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESI----KTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+L++ ++PN E CLIC +P G GV LR C H FCR CL + + + + P + CN+K+Q REI ++ + + E+ L +A+S+ + +HC+T DC+ + + + + F CPICH+ NC+ C IH+G C EYQ + A + ++ +Q G M C C +++K GC+W++C C+ E+CW+ K PRWGP+G GD SGGC+C +N K C P C+
Sbjct: 39 QLDNEVLIPNQEPIDCLICFSEVPVGGGVLLRECLHSFCRECLRQLVNCCEEPEVSCPFRDETYACNSKLQQREIRALVAQEEYSRFLERGLVVAESRSHDSYHCRTADCRGWCVYEDSVNEFTCPICHAQNCLTCKAIHDG-MNCREYQDDLRIRAQNDAAARQTNDMLKTLVQTGEAMYCPVCQIIVQKKDGCDWIRCTMCQTEICWVTKGPRWGPQGPGDTSGGCQCNINGKKCDPRCQ 279 HSP 2 Score: 50.447 bits (119), Expect = 2.830e-6 Identity = 33/136 (24.26%), Postives = 57/136 (41.91%), Query Frame = 2
Query: 191 CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSL----SKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
C H C CL + E ++ CP D C+ + IR + + + L S+ Y C C Y D +F C +C NC++C+A H +NC+ YQ ++I A + ++ +++
Sbjct: 72 CLHSFCRECLRQLVNCCEEPEVSCPFRDETYACNSKLQQREIRALVAQEEYSRFLERGLVVAESRSHDSYHCRTADCRGWCVYEDSVNEFTCPICHAQNCLTCKAIHDGMNCREYQDDLRIRAQNDAAARQTNDML 207
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Match: ENSXETT00000029029.1 (ring finger protein 14 gene 4 [Source:NCBI gene;Acc:100485068]) HSP 1 Score: 61.6178 bits (148), Expect = 1.401e-9 Identity = 48/217 (22.12%), Postives = 85/217 (39.17%), Query Frame = 2
Query: 674 NDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIEN----------------EIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
+ +++ C IC ++C H++C CL + I+ + C +C++ ++ ++ E + L + +A++ +C P+C+ I +P K IC C C +C + ++ C E+ L + Y D+ K +E E N +C C I+KSGGC M C CK CW
Sbjct: 208 DSKSYMCNICFSEKLGSECTHFKDCQHVYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEEFFSRYDRLLLQSSLDLMADVVYCPRPNCRTPFILEPGAKMGICSSCKYAFCTLCKLAYHAVAYCNITQEKLLLVREEYLEADEAGKKLLEKRYGKNVIVKAVEMKSFEWVEKNSKRCPNCRVNIEKSGGCFVMFCTACKENFCW 424
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Match: ENSXETT00000012890.1 (ring finger protein 14 gene 4 [Source:NCBI gene;Acc:100485068]) HSP 1 Score: 60.077 bits (144), Expect = 3.830e-9 Identity = 45/196 (22.96%), Postives = 77/196 (39.29%), Query Frame = 2
Query: 737 LRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIEN----------------EIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCW 1252
+ C H++C CL + I+ + C +C++ ++ ++ E + L + +A++ +C P+C+ I +P K IC C C +C + ++ C E+ L + Y D+ K +E E N +C C I+KSGGC M C CK CW
Sbjct: 229 FKKCEHIYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEEFFSRYDRLLLQSSLDLMADVVYCPRPNCRTPFILEPGAKMGICSSCKYAFCTLCKLAYHAVAYCNITQEKLLLVREEYLEADEAGKKLLEKRYGKNVIVKAVEMKSFEWVEKNSKRCPNCRVNIEKSGGCFVMFCTACKENFCW 424
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Match: ENSXETT00000012882.1 (ring finger protein 14 gene 4 [Source:NCBI gene;Acc:100485068]) HSP 1 Score: 59.6918 bits (143), Expect = 5.054e-9 Identity = 45/219 (20.55%), Postives = 88/219 (40.18%), Query Frame = 2
Query: 674 NDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIENE-----IQAG------------NCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
+ +++ C IC ++C H++C CL + I+ + C +C++ ++ ++ E + L + +A++ +C P+C+ + +P IC C+ C +C + ++G C E+ + Y D+ +++E IQ N C CG I+K+ GCN + C CK CW+
Sbjct: 208 DSKSYMCNICFSEKLGSECTHFKDCQHVYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPRPNCQTPVMLEPGGTMGICSNCNYAFCTLCKMTYHGVSACKLSAEKLMALRNEYLEADEAGKQFMEKRYGKRMIQKALEEMESKEWLEENAKSCPRCGTNIQKTEGCNKLTCTGCKQYFCWL 426
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Match: adarb2 (adenosine deaminase, RNA-specific, B2 (inactive) [Source:Xenbase;Acc:XB-GENE-1011921]) HSP 1 Score: 57.3806 bits (137), Expect = 3.424e-8 Identity = 54/238 (22.69%), Postives = 103/238 (43.28%), Query Frame = 2
Query: 578 NEKERATAVLLQVRHK--HTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNES----IKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFH---CKTPDCKY-FGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ--LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
NE+ + +L+V H + V + I+ + C +C + + K + + L C H FCR+C + +K A + + C+ EC + + + +L + E+ ++ L + + + + C DC + +P + C C + C C +++ C + L+K A D + YI + + C C I+K+GGCN M+C +CK + CW+
Sbjct: 73 NEQMANLSSMLKVSHSVAKLILVHFHWQVSEIVMAHSSHHCAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCTVLVKDGAGVGISCMAQECLLRTPEDFVFPLLP--NEELKDKYRRYLFRDYVESHYQLQLCPGADCPMVIQVQEPKARRVQCNRCSEVFCFRCRQMYHAPTDCATIRKWLTK---CADDSETANYI-----SAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWM 299
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Match: Rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:MGI Symbol;Acc:MGI:1344372]) HSP 1 Score: 154.836 bits (390), Expect = 5.047e-41 Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+LE ++ N E C +C ++ G V LR C H FCR CL +I+ S V C C K+ +REI +L+ D + + +++A+++ +HCKTPDC+ + + D+ F CP+C +NC++C IH C EYQ + + + ++ +Q G M C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 265 QLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHE-HMNCREYQDDLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 505 HSP 2 Score: 59.6918 bits (143), Expect = 4.324e-9 Identity = 42/149 (28.19%), Postives = 67/149 (44.97%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQ----CYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D C + + IR L + + +S E Y C P C F+ D +F C VC+ NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 285 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHEHMNCREYQDDLALRAQNDVAARQTTEML 433
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Match: Rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:MGI Symbol;Acc:MGI:1344372]) HSP 1 Score: 154.836 bits (390), Expect = 5.047e-41 Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+LE ++ N E C +C ++ G V LR C H FCR CL +I+ S V C C K+ +REI +L+ D + + +++A+++ +HCKTPDC+ + + D+ F CP+C +NC++C IH C EYQ + + + ++ +Q G M C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 265 QLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHE-HMNCREYQDDLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 505 HSP 2 Score: 59.6918 bits (143), Expect = 4.324e-9 Identity = 42/149 (28.19%), Postives = 67/149 (44.97%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQ----CYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D C + + IR L + + +S E Y C P C F+ D +F C VC+ NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 285 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHEHMNCREYQDDLALRAQNDVAARQTTEML 433
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Match: Rbck1 (RanBP-type and C3HC4-type zinc finger containing 1 [Source:MGI Symbol;Acc:MGI:1344372]) HSP 1 Score: 75.0998 bits (183), Expect = 7.252e-15 Identity = 46/179 (25.70%), Postives = 76/179 (42.46%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL----NNECNAKIQDREIH---------------------------------------EILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIH 1054
+LE ++ N E C +C ++ G V LR C H FCR CL +I+ S V C C K+ +REI ++L+ D + + +++A+++ +HCKTPDC+ + + D+ F CP+C +NC++C IH
Sbjct: 48 QLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRAVGEEELGTGLKCLVSWDHLIGGGHLLGVLNPSSKAVYVQLLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIH 226
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Match: Arih2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:1344361]) HSP 1 Score: 55.4546 bits (132), Expect = 1.032e-7 Identity = 46/198 (23.23%), Postives = 87/198 (43.94%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNES----IKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFH---CKTPDCKY-FGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ--LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
C +C + + K + + L C H FCR+C + +K + + C+ +C + + + +L + E+ ++ L + + + F C DC + +P + C C + C C +++ C + L+K A D + YI + + C C I+K+GGCN M+C +CK + CW+
Sbjct: 138 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLP--NEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPRARRVQCNRCSEVFCFKCRQMYHAPTDCATIRKWLTK---CADDSETANYI-----SAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWM 324
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Match: Rnf14 (ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]) HSP 1 Score: 54.6842 bits (130), Expect = 1.441e-7 Identity = 70/308 (22.73%), Postives = 117/308 (37.99%), Query Frame = 2
Query: 476 EATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVS--VAQELESCGILP---------------NDETFTCLIC-CKIIPKGSG-VKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEI----LNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIENE-----IQAG------------NCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
E T +LN +K+ + ++ + + E A V + TV Q++ES L N + F C IC C+ + GS + C H++C+ CL + IK + C +C + ++ E+ L R +L + L L +A++ +C P C+ + +P IC C+ C +C + ++G C E+ + Y D+ + +++E IQ N C CG I+K GCN M C C CWI
Sbjct: 6 EETLTYLNIVSPFELKMGSQKKVQRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKL--GSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDL----MADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWI 307
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Match: sp|E6ZIJ1|HOIL1_DICLA (RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Dicentrarchus labrax OX=13489 GN=rbck1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.072e-48 Identity = 89/241 (36.93%), Postives = 134/241 (55.60%), Query Frame = 2
Query: 650 LESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
++S +LPN E C IC + G GV LR C H FCR CL I S V C + C +Q+REI ++ + E ++ L++A+S+ +HC TPDC + + + + F CP+C NC+IC IH G C++YQ ++ + + + ++ +Q+G M C CG +++K GC+W++C C E+CW+ + PRWGPKG GD SGGCRC VN + CHP C+
Sbjct: 465 MDSQDLLPNPEPVDCRICYMDLQPGEGVLLRECLHCFCRECLRSVIMLSEEPEVSCPYRDDTYSCACSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKSIHEG-MNCKQYQDDLAARAINDSAARRTTQLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVCHTEICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQ 704 HSP 2 Score: 57.3806 bits (137), Expect = 1.826e-7 Identity = 41/128 (32.03%), Postives = 57/128 (44.53%), Query Frame = 2
Query: 158 DLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
DL+ E LR C H C CL + I + E ++ CP D C S+ + IR +P + LS + E Y C P C Y D F C VC NC+ C++ H +NC++YQ
Sbjct: 485 DLQPGEGVLLRECLHCFCRECLRSVIMLSEEPEVSCPYRDDTYSCACSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKSIHEGMNCKQYQ 612
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Match: sp|A9JTG5|HOIL1_DANRE (RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.283e-46 Identity = 104/356 (29.21%), Postives = 169/356 (47.47%), Query Frame = 2
Query: 323 NRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQ--FECSVCSMFNCISCEATHP---FLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK----YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
N E + LS + LP + +IQ + C C+ N + T P + R + + E I + E R + + + +++ ++PN E C IC + G GV LR C H FC+ CL I S V C + C+ +Q+REI +++ D + ++ L++A+S+ +HC T DC + + + + +F CP+C NC++C IH G C++YQ A++D + + ++ + +G M C CG +++K GC+W++C C E+CW+ + PRWGPKG GD SGGCRC VNK+ CHP C+
Sbjct: 362 NNAGGSERLGLSDIRDLINLELPQLNEALGPNRTSIQPGWACPTCTYIN----KPTRPGCEMCSADRPEGYTVPGNYRPDALELRRIQQEKEAIRQYQQARETERRENFARLVQMDGQDLVPNPERVECRICYVELESGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDESYACDCVLQEREIRALVSVDDYQHWLQRGLSVAESRCEGSYHCATADCPGWCVYEDTVNTFHCPVCKKQNCLLCKAIHEG-MNCKQYQ-DDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCGIIVQKKEGCDWLRCTVCHTEICWVTRGPRWGPKGPGDISGGCRCNVNKQRCHPKCQ 711
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Match: sp|Q9BYM8|HOIL1_HUMAN (RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo sapiens OX=9606 GN=RBCK1 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.366e-41 Identity = 88/242 (36.36%), Postives = 137/242 (56.61%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+L+ ++ N E C +C ++ G V LR C H FCR CL +I+ S V C ++N C+ K+ +REI +L D + + +++A+++ A +HCKTPDCK + + D+ F CP+C +NC++C IH C+EYQ + + + ++ +Q G M+C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 267 QLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHE-QMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 507 HSP 2 Score: 56.225 bits (134), Expect = 4.083e-7 Identity = 40/149 (26.85%), Postives = 70/149 (46.98%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKAL-----PDN--RITDYEF-MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D S + ++ + + P++ R D ++ ++ Y C P C F+ D +F C VC NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 287 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 435
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Match: sp|Q62921|HOIL1_RAT (RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 9.493e-41 Identity = 87/242 (35.95%), Postives = 133/242 (54.96%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQC--LNN--ECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+LE ++ N E C +C ++ G V LR C H FCR CL +I+ S V C ++N C K+ +REI +L+ D + + +++A+++ +HCKTPDC+ + + D+ F CP+C +NC++C IH C EYQ + + + + +Q G M C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 265 QLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHE-RMNCREYQDDLAHRARNDVAAQQTTEMLRVMLQQGEAMYCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 505 HSP 2 Score: 56.9954 bits (136), Expect = 2.208e-7 Identity = 40/129 (31.01%), Postives = 57/129 (44.19%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQ----CYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
S L E LR C H C CL I ++ E+++ CP D C + + IR L + + +S E Y C P C F+ D +F C VC+ NC+ C+A H +NC+ YQ
Sbjct: 285 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHERMNCREYQ 413
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Match: sp|Q9WUB0|HOIL1_MOUSE (RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Rbck1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.530e-40 Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
+LE ++ N E C +C ++ G V LR C H FCR CL +I+ S V C C K+ +REI +L+ D + + +++A+++ +HCKTPDC+ + + D+ F CP+C +NC++C IH C EYQ + + + ++ +Q G M C C +++K GC+W++C C E+CW+ K PRWGP G GD SGGCRC VN PCHP+C+
Sbjct: 265 QLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHE-HMNCREYQDDLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQ 505 HSP 2 Score: 59.6918 bits (143), Expect = 3.024e-8 Identity = 42/149 (28.19%), Postives = 67/149 (44.97%), Query Frame = 2
Query: 155 SDLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQ----CYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIM 571
S L E LR C H C CL I ++ E+++ CP D C + + IR L + + +S E Y C P C F+ D +F C VC+ NC+ C+A H +NC+ YQ + + A ++ ++ E++
Sbjct: 285 SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHEHMNCREYQDDLALRAQNDVAARQTTEML 433
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Match: A0A293M7T5 (RanBP-type and C3HC4-type zinc finger containing 1 (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 4.866e-62 Identity = 137/402 (34.08%), Postives = 195/402 (48.51%), Query Frame = 2
Query: 191 CRHIICWSCLATYIESNLESKICCP----MNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQC--YKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL-----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDM---SIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKT 1354
C H +C +C+ + + + I CP + C +++ I+++ Y+ M + C +C C + + +C +C+ C+ C A HP C+ Y + AL DK LE D+ EK L R +PN E F C+IC I G+ L+NCHH C+ CL +++ S T V C + C I D EI IL+ D + L EK + A+ K AN FHCK+ DC+ + I D ++ +F CPIC NC+ C IH TCE YQ + D SIK++E++++ G M+C C ++ K GGC++M C C+ LCW K PRWGPKG GDNSGGCRC VN CHPTC T
Sbjct: 6 CEHRLCRTCIESTVRNAYLPTIMCPVKQSLGRCSGTVSALEIKQSTSKEAYNRYKAMQKWEKMNCPNKRCQAEFCIDTSMKS-----MQCPLCNFNICMDCRACHPQKTCKEYIEWFVHAL----DKGQLEDPDEKEKRYREEWNLHER--------------AFVPNMEEFDCIICYATIEPEGGLVLKNCHHKICKECLINTVRNSETAEVHCPCIAEDDKPCTMDILDDEIRAILSPEDYDALLEKGVAEAERKEANSFHCKSLDCRGWCIYDAEVNTFDCPICGMANCLRCEAIH-PDVTCEVYQADLKRRAENDQAAKASIKFLEDQLEQGTAMRCPTCKVVVIKRGGCDYMVCASCQTALCWATKGPRWGPKGAGDNSGGCRCMVNNVKCHPTCTT 383
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Match: A0A2R5L6Y6 (Putative ubiquitin conjugating enzyme (Fragment) OS=Ornithodoros turicata OX=34597 PE=4 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.983e-60 Identity = 145/419 (34.61%), Postives = 205/419 (48.93%), Query Frame = 2
Query: 140 QKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQCY--KCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL-----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKT 1354
+ C+S + + C H +C +C+ +E+ I CP+ C ++ I+K + + Y+ M ++ C KC C N F+C C + NC C A H +C+ Y + L DK LE D EKE+ + R + Q+L I+PN E F C++C + G G+ L+NCHH C++CL +I TS VQC + C I D EI EIL+ E EK L A+ K AN FHCKT +C+ + I D ++ +F CP+C NC+ C IH TCE YQ + A SIK++E++++ G M+C C ++ K GC++M C CK LCW K RWGPKG GDNSGGCRC V+ CHPTC T
Sbjct: 360 EACDSCRKTKYAMTVEACEHHLCSNCIRAVVENAYLRNIMCPVKQSSGRCSAILSRDDIKKNVSRQAYSRYKQMLTWEIMTCQNKKCHAEFCVN-----PSKDSFKCPRCKVTNCTKCRACHEGQSCEEY----VEWLVGAMDKGLLE--DPAEKEK------RFREQ------QQLYEKNIVPNTEQFDCVVCFGEVEPGEGLILKNCHHSICKDCLKNTIATSENAEVQCPCFAEDSQPCTMNILDDEIREILSPEGYEAFLEKGLIEAERKTANSFHCKTVNCRGWCIYDAEVNTFDCPVCEQPNCLRCEAIH-PDVTCEAYQADLKRRAANDAAAKASIKFLEDQLEQGVAMRCPTCKVIVIKRSGCDYMVCASCKTALCWATKGARWGPKGAGDNSGGCRCMVDGVKCHPTCTT 754
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Match: A0A293M563 (RanBP-type and C3HC4-type zinc finger containing 1 (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.520e-59 Identity = 138/408 (33.82%), Postives = 197/408 (48.28%), Query Frame = 2
Query: 173 EVETLRCRHIICWSCLATYIESNLESKICCP----MNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQC--YKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL-----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDM---SIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKT 1354
E+ C H +C +C+ + + + I CP + C +++ I+++ Y+ M + C +C C + + +C +C+ C+ C A HP C+ Y + AL DK LE D+ EK L R +PN E F C+IC I G+ L+NCHH C+ CL +++ S T V C + C I D EI IL+ D + L EK + A+ K AN FHCK+ DC+ + I D ++ +F CPIC NC+ C IH TCE YQ + D SIK++E++++ G M+C C ++ K GGC++M C C+ LCW K PRWGPKG GDNSGGCRC VN CHPTC T
Sbjct: 348 EMTLAECEHRLCRTCIESTVRNAYLPTIMCPVKQSLGRCSGTVSALEIKQSTSKEAYNRYKAMQKWEKMNCPNKRCQAEFCIDTSMKS-----MQCPLCNFNICMDCRACHPQKTCKEYIEWFVHAL----DKGQLEDPDEKEKRYREEWNLHER--------------AFVPNMEEFDCIICYATIEPEGGLVLKNCHHKICKECLINTVRNSETAEVHCPCIAEDDKPCTMDILDDEIRAILSPEDYDALLEKGVAEAERKEANSFHCKSLDCRGWCIYDAEVNTFDCPICGMANCLRCEAIH-PDVTCEVYQADLKRRAENDQAAKASIKFLEDQLEQGTAMRCPTCKVVVIKRGGCDYMVCASCQTALCWATKGPRWGPKGAGDNSGGCRCMVNNVKCHPTCTT 731
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Match: A0A293M1Z8 (RanBP-type and C3HC4-type zinc finger containing 1 (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.296e-59 Identity = 138/408 (33.82%), Postives = 197/408 (48.28%), Query Frame = 2
Query: 173 EVETLRCRHIICWSCLATYIESNLESKICCP----MNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQC--YKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCL-----NNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDM---SIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKT 1354
E+ C H +C +C+ + + + I CP + C +++ I+++ Y+ M + C +C C + + +C +C+ C+ C A HP C+ Y + AL DK LE D+ EK L R +PN E F C+IC I G+ L+NCHH C+ CL +++ S T V C + C I D EI IL+ D + L EK + A+ K AN FHCK+ DC+ + I D ++ +F CPIC NC+ C IH TCE YQ + D SIK++E++++ G M+C C ++ K GGC++M C C+ LCW K PRWGPKG GDNSGGCRC VN CHPTC T
Sbjct: 438 EMTLAECEHRLCRTCIESTVRNAYLPTIMCPVKQSLGRCSGTVSALEIKQSTSKEAYNRYKAMQKWEKMNCPNKRCQAEFCIDTSMKS-----MQCPLCNFNICMDCRACHPQKTCKEYIEWFVHAL----DKGQLEDPDEKEKRYREEWNLHER--------------AFVPNMEEFDCIICYATIEPEGGLVLKNCHHKICKECLINTVRNSETAEVHCPCIAEDDKPCTMDILDDEIRAILSPEDYDALLEKGVAEAERKEANSFHCKSLDCRGWCIYDAEVNTFDCPICGMANCLRCEAIH-PDVTCEVYQADLKRRAENDQAAKASIKFLEDQLEQGTAMRCPTCKVVVIKRGGCDYMVCASCQTALCWATKGPRWGPKGAGDNSGGCRCMVNNVKCHPTCTT 821
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Match: A0A482X5M0 (Uncharacterized protein OS=Laodelphax striatellus OX=195883 GN=LSTR_LSTR002706 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.152e-54 Identity = 113/318 (35.53%), Postives = 170/318 (53.46%), Query Frame = 2
Query: 434 FECSVCSMFN------CISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQC----LNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ---LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTC 1348
++C VC++ N C +C + P YQI T+ + E E+M +E+ V + R K+ + LE+ I+ + E F C IC + G GV LR+C H FCR CL ++++ S V+C N C++ + REI ++ E K T A++K+ N FHCKTPDC+ +GI + ++ F CP+C+ +NC+ C IH G C++YQ + +A + +E ++ G MKC C ++ K GC+W++C CK E+CW+ + PRWGP GKGD SGGC CGVN CHP C
Sbjct: 1540 WKCDVCTLMNSPLRPVCAACTSPRP----AAYQIP-----TDYQASEQ-ELMRIQNEEKVLQVTAEERLKNYQELVN-LENADIVASAEPFDCPICLLLCQPGDGVVLRDCLHTFCRPCLVDTVQYSEEAEVKCPYRDANYACDSALLQREIKALVPADVYEQHLAKSRTQAENKIGNTFHCKTPDCRGWGIFEDNVNEFPCPVCNFVNCLTCKAIHTGIN-CKQYQERAKQDSDTNADARRTNAMLEEMVERGEAMKCPTCQVILMKKWGCDWLRCSMCKTEICWVTRGPRWGPLGKGDTSGGCHCGVNGVKCHPKC 1845 HSP 2 Score: 63.929 bits (154), Expect = 7.385e-7 Identity = 27/116 (23.28%), Postives = 56/116 (48.28%), Query Frame = 2
Query: 191 CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALP--------DNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
C H C CL ++ + E+++ CP D + + + ++++ + + + + +K+ + C P C + D +F C VC+ NC++C+A H +NC++YQ
Sbjct: 1639 CLHTFCRPCLVDTVQYSEEAEVKCPYRDANYACDSALLQREIKALVPADVYEQHLAKSRTQAENKIGNTFHCKTPDCRGWGIFEDNVNEFPCPVCNFVNCLTCKAIHTGINCKQYQ 1754
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Match: rbck1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:NCBI gene;Acc:103044240]) HSP 1 Score: 172.555 bits (436), Expect = 1.566e-47 Identity = 99/275 (36.00%), Postives = 147/275 (53.45%), Query Frame = 2
Query: 563 EIMDKNEKERAT----AVLLQVRHKHTVSVAQELESCGILPNDETFTCLIC-CKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
EI+ ++E A+ +++ R K+ ++ E++S ++ N E C IC C ++P G G LR C H FCR CL ++I VQC + C +QDREI +L+ + + E L++A+S+ N +HCKTPDC + I + D+ FIC C NC++C IH C+EYQ + + + +E + G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGCRC VN CHP C+
Sbjct: 259 EILRLQQEELASLQYEQSIVEEREKNFYNLL-EIDSQNLVSNTEELDCTICFCPVMP-GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHK-DMNCKEYQDDLRIRAENDTAAKKTTEMLEMLVTNGEAMYCPKCKVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGNGDTSGGCRCRVNGVLCHPRCQ 530 HSP 2 Score: 60.4622 bits (145), Expect = 2.010e-9 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 2
Query: 170 NEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMD 574
E TLR C H C CL I + ++++ CP D C ++ D I+ L +E + LS + E Y C P CG + D +F C C NC+ C+A H +NC+ YQ ++I A + K+ E+++
Sbjct: 315 GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHKDMNCKEYQDDLRIRAENDTAAKKTTEMLE 459
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Match: rbck1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:NCBI gene;Acc:103044240]) HSP 1 Score: 172.555 bits (436), Expect = 1.642e-47 Identity = 93/243 (38.27%), Postives = 131/243 (53.91%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLIC-CKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
E++S ++ N E C IC C ++P G G LR C H FCR CL ++I VQC + C +QDREI +L+ + + E L++A+S+ N +HCKTPDC + I + D+ FIC C NC++C IH C+EYQ + + + +E + G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGCRC VN CHP C+
Sbjct: 274 EIDSQNLVSNTEELDCTICFCPVMP-GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHK-DMNCKEYQDDLRIRAENDTAAKKTTEMLEMLVTNGEAMYCPKCKVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGNGDTSGGCRCRVNGVLCHPRCQ 514 HSP 2 Score: 60.4622 bits (145), Expect = 1.831e-9 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 2
Query: 170 NEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMD 574
E TLR C H C CL I + ++++ CP D C ++ D I+ L +E + LS + E Y C P CG + D +F C C NC+ C+A H +NC+ YQ ++I A + K+ E+++
Sbjct: 299 GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHKDMNCKEYQDDLRIRAENDTAAKKTTEMLE 443
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Match: rbck1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:NCBI gene;Acc:103044240]) HSP 1 Score: 172.17 bits (435), Expect = 3.637e-47 Identity = 93/243 (38.27%), Postives = 131/243 (53.91%), Query Frame = 2
Query: 647 ELESCGILPNDETFTCLIC-CKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
E++S ++ N E C IC C ++P G G LR C H FCR CL ++I VQC + C +QDREI +L+ + + E L++A+S+ N +HCKTPDC + I + D+ FIC C NC++C IH C+EYQ + + + +E + G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGCRC VN CHP C+
Sbjct: 304 EIDSQNLVSNTEELDCTICFCPVMP-GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHK-DMNCKEYQDDLRIRAENDTAAKKTTEMLEMLVTNGEAMYCPKCKVIVQKKDGCDWICCLMCKTEICWVTKQARWGPLGNGDTSGGCRCRVNGVLCHPRCQ 544 HSP 2 Score: 60.4622 bits (145), Expect = 2.440e-9 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 2
Query: 170 NEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ-IMKISALTNIKDKEYLEIMD 574
E TLR C H C CL I + ++++ CP D C ++ D I+ L +E + LS + E Y C P CG + D +F C C NC+ C+A H +NC+ YQ ++I A + K+ E+++
Sbjct: 329 GEGATLRECLHSFCRECLKQTIVNCTDAEVQCPYRDDEYACAYTLQDREIKTLLSAEEYQKFEELRLSIAESRSENSYHCKTPDCGGWCIFEDDVNEFICDSCGEKNCLLCKAIHKDMNCKEYQDDLRIRAENDTAAKKTTEMLE 473
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Match: shrprbck1r (ranBP-type and C3HC4-type zinc finger-containing protein 1-like [Source:NCBI gene;Acc:103029459]) HSP 1 Score: 149.058 bits (375), Expect = 3.317e-38 Identity = 90/274 (32.85%), Postives = 146/274 (53.28%), Query Frame = 2
Query: 554 EYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK----YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
E I + E R + + + +++ ++PN E+ C IC + G GV LR C H FCR CL I S V C + C+ +Q+REI +++ + E ++ L++A+S+ +HC T DC + + + + +F CP+C NC++C IH G C++YQ A++D + + ++ +++G M C CG +++K GC+W++C C E+CW+ + PRWGP G GD SGGCRC VNK+ CHP C+
Sbjct: 451 ELRRIQQEKEAIRQYQQAQEAERRENYARLVQMDGQELVPNPESVECRICYLQLQPGEGVLLRECLHCFCRECLRSVILLSEDPQVACPYRDEAYACDCVLQEREIRALVSGEEYERWLQRGLSVAESRCEGSYHCATTDCPGWCVYEDTVNTFHCPVCTKHNCLLCKAIHEG-MNCKQYQDDLAA-RAINDTAARRTRDLLKTLVRSGEAMHCPQCGIIVQKKEGCDWLRCTVCHTEICWVTRGPRWGPGGPGDTSGGCRCNVNKQRCHPKCQ 722 HSP 2 Score: 48.9062 bits (115), Expect = 9.141e-6 Identity = 37/128 (28.91%), Postives = 54/128 (42.19%), Query Frame = 2
Query: 158 DLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
L+ E LR C H C CL + I + + ++ CP D C + + IR + + LS + E Y C C Y D F C VC+ NC+ C+A H +NC++YQ
Sbjct: 503 QLQPGEGVLLRECLHCFCRECLRSVILLSEDPQVACPYRDEAYACDCVLQEREIRALVSGEEYERWLQRGLSVAESRCEGSYHCATTDCPGWCVYEDTVNTFHCPVCTKHNCLLCKAIHEGMNCKQYQ 630
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Match: shrprbck1r (ranBP-type and C3HC4-type zinc finger-containing protein 1-like [Source:NCBI gene;Acc:103029459]) HSP 1 Score: 138.272 bits (347), Expect = 1.066e-34 Identity = 74/250 (29.60%), Postives = 128/250 (51.20%), Query Frame = 2
Query: 554 EYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK----YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGP 1279
E I + E R + + + +++ ++PN E+ C IC + G GV LR C H FCR CL I S V C + C+ +Q+REI +++ + E ++ L++A+S+ +HC T DC + + + + +F CP+C NC++C IH G C++YQ A++D + + ++ +++G M C CG +++K GC+W++C C E+CW+ + PRWGP
Sbjct: 422 ELRRIQQEKEAIRQYQQAQEAERRENYARLVQMDGQELVPNPESVECRICYLQLQPGEGVLLRECLHCFCRECLRSVILLSEDPQVACPYRDEAYACDCVLQEREIRALVSGEEYERWLQRGLSVAESRCEGSYHCATTDCPGWCVYEDTVNTFHCPVCTKHNCLLCKAIHEG-MNCKQYQDDLAA-RAINDTAARRTRDLLKTLVRSGEAMHCPQCGIIVQKKEGCDWLRCTVCHTEICWVTRGPRWGP 669
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Sea Lamprey
Match: RBCK1 (RANBP2-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:HGNC:15864]) HSP 1 Score: 174.481 bits (441), Expect = 6.663e-49 Identity = 108/322 (33.54%), Postives = 161/322 (50.00%), Query Frame = 2
Query: 422 KAIQFECSVCSMFN------CISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK---YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTC 1348
K + + C VC+ N C C P YQ+ T+ + + + MD K T V + R ++ + QE E ++PN E FTC IC G GV LR C H FC++CL+ +I V C N + C K+ REI +++E + K L +A+++ A+ +HC T DC + + + F+CPIC NC+ C IH G C+EYQ S D +++ ++ +Q G+ M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGC+C +N + CHP C
Sbjct: 203 KQVGWPCPVCTFVNLPLRPGCDQCGTARP----ADYQVPAGYQPTDRERRITDQEMDNRRKLEETRV--KKRRENFQRLMQEDEQ-ELVPNKEAFTCPICFVDYEPGEGVTLRECLHNFCKDCLHGTIVNCEDAEVTCPNQDGEISCEFKLHQREIKALVSEVEYCRFLGKGLAIAENRSADSYHCVTADCLGWCFYEDMVNDFLCPICKKSNCLTCKAIHEG-MDCQEYQDDLKLRSDNDQAAMQTNLMLQTMVQTGDAMHCPTCKVIVQKKDGCDWICCSICKTEICWVTKGARWGPNGTGDTSGGCQCRINDRMCHPDC 516 HSP 2 Score: 51.2174 bits (121), Expect = 3.143e-7 Identity = 36/129 (27.91%), Postives = 60/129 (46.51%), Query Frame = 2
Query: 158 DLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEF---------MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
D E E TLR C H C CL I + ++++ CP D IS + ++ + +++ E+ ++ ++ Y C+ C FY D F C +C NC++C+A H ++CQ YQ
Sbjct: 298 DYEPGEGVTLRECLHNFCKDCLHGTIVNCEDAEVTCPNQDGEISCEFKLHQREI-KALVSEVEYCRFLGKGLAIAENRSADSYHCVTADCLGWCFYEDMVNDFLCPICKKSNCLTCKAIHEGMDCQEYQ 425
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Sea Lamprey
Match: zmp:0000000524 (zmp:0000000524 [Source:ZFIN;Acc:ZDB-GENE-130530-527]) HSP 1 Score: 57.7658 bits (138), Expect = 2.674e-9 Identity = 50/216 (23.15%), Postives = 82/216 (37.96%), Query Frame = 2
Query: 683 TFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIENEIQ-----------------AGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
F+C IC S V L C H++CR+CL+ I+ + C +C ++ E++ E + L + +A++ +C C+ + +P+ CP C C +C ++G C E + Y+ D S ++E A N C C I+K GCN M C C+L CW+
Sbjct: 223 VFSCHICLCEKLGSSCVNLSGCEHVYCRDCLSAYFQLQIQEGNVHSLTCPEPKCQTVATPSQVRELVGEELFSRYDRLLLQSSLDLMADVVYCPRTSCQTPVLLEPNKTMGHCPQCKFAFCNVCRHAYHGISACIIKSENLENILKKYNNADAASRAFLEQRYGKHTIKRAIEEVHSKDWLAQNAKACPRCCTNIQKVDGCNKMTCSSCQLYFCWL 438
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Yeast
Match: HEL1 (RING finger ubiquitin ligase (E3); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; null mutant sensitive to hydroxyurea (HU) [Source:SGD;Acc:S000001725]) HSP 1 Score: 52.7582 bits (125), Expect = 8.443e-8 Identity = 52/209 (24.88%), Postives = 84/209 (40.19%), Query Frame = 2
Query: 686 FTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIP--VQCLNNECNAKIQDREIHEILNE-RDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCM-----KCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGK 1288
FTC+ICC K + C H +C NC IK + C+ +C+ +++ +I +++ S++++ + + N C DCK H + CN H C +++ + +K E + N + +C C I+K+GGCN M C CK E CWI + P W P GK
Sbjct: 177 FTCIICCD--KKDTETFALECGHEYCINCYRHYIKDKLHEGNIITCM--DCSLALKNEDIDKVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIVHLRDTSSLPEYTRLHYSPFVKCNSFHRFCFNCG-FEVHSPADCKITTAWVKKARKESEILNWVLSHTKECPKCSVNIEKNGGCNHMVCSSCKYEFCWICEGP-WAPHGK 379
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Nematostella
Match: EDO39228 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAP2]) HSP 1 Score: 181.8 bits (460), Expect = 2.628e-54 Identity = 89/236 (37.71%), Postives = 133/236 (56.36%), Query Frame = 2
Query: 665 ILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIK---YIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
++ N E F C IC +P G GV LR C H FC +CL E I+ VQC + C+ I +EI +L+E D + L A+S+ AN FHCKTP+C + + + ++ +F C +C +NC+ C IH C EYQ + DD + + Y+E+ I+ G+ M+C C ++ K GC+WM+C C++E+CW + PRWGP+G GD + GC+C V + CHP C+
Sbjct: 3 LILNQEEFDCAICFTEVPPGEGVVLRECLHRFCIDCLREHIRNCTDPEVQCPYQDEQFACHFIITAQEIKALLSEEDFNKFLNRSLATAESQAANSFHCKTPNCPGWCLYEDNVNTFHCEVCSKVNCLTCKAIHFPEMNCREYQQDIQRRALNDDAAKQTQLYLEDMIKKGDAMRCPQCQIILLKKDGCDWMRCSMCRMEICWATRGPRWGPQGVGDTTAGCKCRVGGRKCHPNCR 238 HSP 2 Score: 62.003 bits (149), Expect = 7.025e-11 Identity = 49/167 (29.34%), Postives = 71/167 (42.51%), Query Frame = 2
Query: 116 MSDNNFKCQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMND----CHISINDGIIRKALPDNRITDYEFMSLSKLEQ----CYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATH-PFLNCQRYQI-MKISALTNIKDKE---YLEIMDK 577
++ F C C + V C H C CL +I + + ++ CP D CH I I+ L + + SL+ E + C P C Y D F C VCS NC++C+A H P +NC+ YQ ++ AL + K+ YLE M K
Sbjct: 5 LNQEEFDCAICFTEVPPGEGVVLRECLHRFCIDCLREHIRNCTDPEVQCPYQDEQFACHFIITAQEIKALLSEEDFNKFLNRSLATAESQAANSFHCKTPNCPGWCLYEDNVNTFHCEVCSKVNCLTCKAIHFPEMNCREYQQDIQRRALNDDAAKQTQLYLEDMIK 171
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Nematostella
Match: EDO47022 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RN84]) HSP 1 Score: 70.0922 bits (170), Expect = 5.363e-13 Identity = 51/215 (23.72%), Postives = 91/215 (42.33%), Query Frame = 2
Query: 686 FTCLICCKIIPKGSGVKLRNCHHMFCRNCLNE----SIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCE-----------EYQLSKGNYSAVDDMS-----IKYIENEIQA-----GNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
FTC +C P + NC H+FC C+ I + + C ++C ++ ++ +++E ++ L + +++I +C PDC+ + D + +CP C C IC + ++G C EY + A+ D +K + E+ + NC KC +C I+K GCN M C +C+ CW+
Sbjct: 196 FTCDVCFSEKPGSMCLAFHNCGHVFCCECMTGYFTVQINDGSVKALTCPTSKCESQALPSQVKRVVSEETFAKYDKFLLQSSLDGMSDITYCPRPDCQSPVLVDSESTIGLCPACSFAFCKICRLGYHGVSPCSIKNSEFRKLRTEYLKATEEERALLDQRYGRDRLKKVFEEVVSEDWVKSNCTKCPSCSYQIQKFDGCNKMTCIKCRANFCWL 410
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Nematostella
Match: EDO48096 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK36]) HSP 1 Score: 54.6842 bits (130), Expect = 4.760e-8 Identity = 54/208 (25.96%), Postives = 92/208 (44.23%), Query Frame = 2
Query: 668 LPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPV----QCLNNECNAKIQDREIHEILNE---RDSEI---LNEKCLTLAKSKLANIFHCKTPDCKYFGICD-PDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDM-SIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
+P+ T+ C +C + +P+ + L C H FC +C + + I V +C+N CN + + + +L R+ I N++ T +K + C +C + + P K IC C+++ C C ++ C + K DD + YI N C CG I+K+GGCN M+C +CK + CW+
Sbjct: 113 MPSRPTY-CPVCFQRMPRTVTISL-PCGHFFCDSCWSAHFASQLQIGVSSGIECMN--CNLLVGETVVLNVLKGGKLREKFINFLFNDQIKTFSKLRW-----CPGINCGFLVRAEEPAAKRVICSKCNTMFCFSCGEKYHAPTDCA--TIRKWLTKCEDDSETANYI-----TANTKDCPECGSCIEKNGGCNHMQCIKCKHDFCWM 304
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Nematostella
Match: EDO43053 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZU5]) HSP 1 Score: 52.7582 bits (125), Expect = 1.213e-7 Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 2
Query: 752 HMFCRNCL----NESIKTSATIPVQCLNNECNAKIQDREIHEILNE----RDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFIC--PICHSLNCIIC--NVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIP 1267
H+FC NCL ES+ + C+ +ECN+ ++ + L E + + L E+ L+LA+ + ++ C P C++ + K F C C C C N + C E + KG D+ I Y E + KC CGC KS GCN M C +C C++ + P
Sbjct: 80 HLFCENCLMNYAKESVFGQGKATLMCMTSECNSSFPLSQLKKTLPENILSKYEDRLQEEALSLAE--MEDLVRC--PSCEFAAVLPSGNKVFKCLNQKCGKETCRHCKENWSDHFGLKCSEIE-KKGE----KDLRISY-EERMTMAKIRKCHKCGCEFTKSDGCNKMTC-RCGTTQCYVCRKP 252
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Match: shrprbck1r (ranBP-type and C3HC4-type zinc finger-containing protein 1 [Source:NCBI gene;Acc:101169745]) HSP 1 Score: 184.496 bits (467), Expect = 1.001e-50 Identity = 90/245 (36.73%), Postives = 136/245 (55.51%), Query Frame = 2
Query: 665 ILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNE----CNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENE------------IQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
++PN + C IC +P G GV LR C H FCR CL I S V C + C+ +Q+REI +++ + E ++ L++A+S+ +HC TPDC + + + + F CP+C NC+IC IH G C++YQ DD++++ I + +Q+G M C CG +++K GC+W++C C +E+CW+ + PRWGPKG GD SGGCRC VN + CHP C+
Sbjct: 472 LVPNPDPVDCRICYMDLPSGQGVLLRECLHCFCRECLRSVIMLSEEPEVSCPYRDDAYSCDGVLQEREIKALVSAEEYERWLQRGLSMAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKAIHEG-MNCKQYQ---------DDLAVRAINDSAARRTTHLLMTLVQSGEAMYCPQCGIIVQKRDGCDWLRCTVCHIEICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQ 706 HSP 2 Score: 55.8398 bits (133), Expect = 6.249e-8 Identity = 40/129 (31.01%), Postives = 59/129 (45.74%), Query Frame = 2
Query: 158 DLERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEF---------MSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQ 514
DL + LR C H C CL + I + E ++ CP D S DG++++ ++ E+ M+ S+ E Y C P C Y D F C VC NC+ C+A H +NC++YQ
Sbjct: 487 DLPSGQGVLLRECLHCFCRECLRSVIMLSEEPEVSCPYRDDAYSC-DGVLQEREIKALVSAEEYERWLQRGLSMAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKAIHEGMNCKQYQ 614
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Match: rbck1 (ranBP-type and C3HC4-type zinc finger-containing protein 1 [Source:NCBI gene;Acc:101166217]) HSP 1 Score: 177.563 bits (449), Expect = 2.044e-49 Identity = 88/232 (37.93%), Postives = 133/232 (57.33%), Query Frame = 2
Query: 665 ILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLS---KGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCK 1351
++ N C IC + G GV LR C H FCR CL +I+ S V C ++C +K+ DREI E+L E + + E L++A+S+ + FHC+TP+C+ + I + ++ F C +C +NC++C IH C++YQ + + + +E+ +Q G M C C +++K GC+W+ C CK E+CW+ K RWGP G GD SGGCRC VN +PCHP C+
Sbjct: 286 LIVNATVADCPICFNALQPGEGVVLRECLHTFCRECLIGTIRNSNNAEVSC-PDDCESKLLDREIKELLTEEEHQRFLELRLSIAESRSEHSFHCQTPNCRGWCIYEDEVNEFHCDLCLEVNCLLCRAIHK-DMNCKDYQDDLRIRAQNDKAAQQTKQMLESMLQNGEAMNCPRCAIIVQKKDGCDWICCLMCKTEICWVTKQARWGPNGPGDTSGGCRCRVNNQPCHPNCQ 515 HSP 2 Score: 58.151 bits (139), Expect = 1.262e-8 Identity = 53/195 (27.18%), Postives = 79/195 (40.51%), Query Frame = 2
Query: 161 LERNEVETLR-CRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLS----KLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSG 730
L+ E LR C H C CL I ++ +++ CP +DC + D I++ L + + + LS + E + C P C Y D+ +F C +C NC+ C A H +NC+ YQ + L I +N+K Q LES +L N E C C I+ K G
Sbjct: 302 LQPGEGVVLRECLHTFCRECLIGTIRNSNNAEVSCP-DDCESKLLDREIKELLTEEEHQRFLELRLSIAESRSEHSFHCQTPNCRGWCIYEDEVNEFHCDLCLEVNCLLCRAIHKDMNCKDYQ-------------DDLRIRAQNDKA-------------AQQTKQMLES--MLQNGEAMNCPRCAIIVQKKDG 467
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Match: zmp:0000000524 (ring finger protein 14 [Source:NCBI gene;Acc:101167638]) HSP 1 Score: 60.4622 bits (145), Expect = 2.036e-9 Identity = 48/198 (24.24%), Postives = 79/198 (39.90%), Query Frame = 2
Query: 737 LRNCHHMFCRNCLNESIKTSATIP-VQCLN---NECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTC----EEYQLSKGNYSAVDDMSIKYIENE-----IQAG------------NCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
+ C H++C C+ E + VQCLN +C + ++ ++++E + L +A++ +C C + +PD IC C C +C + ++G C EE + + Y + K++E IQ NC C CG I+K GCN M C CK CW+
Sbjct: 239 FKECQHVYCNACMTEYFQIQIRDGNVQCLNCPEPKCTSLATPLQVKQLVDEELFARYDRLLLQSTLDLMADVVYCPRQFCGTAVMVEPDTTMGICSACQHAFCTMCKLAYHGVSHCKFPAEELRNLRDEYLSATSEGKKFMEKRFGKRVIQKAVEESFSRDWLTENCKCCPKCGTNIQKVDGCNKMTCTSCKQYFCWL 436
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Match: arih2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101159099]) HSP 1 Score: 52.7582 bits (125), Expect = 5.483e-7 Identity = 47/210 (22.38%), Postives = 93/210 (44.29%), Query Frame = 2
Query: 656 SCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNES----IKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFH---CKTPDCK-YFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQ--LSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWI 1255
S ++ ++ C +C +++ + + L C H FC C + +K + + C+ +C ++ + + +L + E+ ++ L + + + F C DC + +P + C C + C C +++ C + L+K A D + YI + +C KC C I+K+GGCN M+C +CK + CW+
Sbjct: 129 SSRLVTAPQSLQCGVCLQVVRRDYLLTL-PCQHYFCTACWEQHCTVLVKDGTGVGISCMAQDCPLRMPEDFVLPLL--QGEELKDKYRRYLFRDYIESHFRLQLCPGADCPIVIKVQEPRARRVQCSRCGEVFCFKCRQMYHAPTDCATIRKWLTK---CADDSETANYISAHTK--DCPKCNIC---IEKNGGCNHMQCSKCKHDFCWM 327
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Match: si:ch211-278j3.3 (E3 ubiquitin-protein ligase RNF19A [Source:NCBI gene;Acc:101162972]) HSP 1 Score: 52.7582 bits (125), Expect = 6.505e-7 Identity = 49/209 (23.44%), Postives = 89/209 (42.58%), Query Frame = 2
Query: 692 CLICCKIIPKGSGVKLRNCHHMFCRNCLNESIK---TSATIPVQCLNNECNAKIQDREIHEILNERDSEILN---EKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNC----------IICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMK---CVACGCLIKKS--GGCNWMKCPQCKLELCWI 1255
C +C P+ +L +C H C +CL + ++ + + + + C +C + ++ IL+ DS +L E L + + C PDC Y I ++ C C L+C C + + +QTC++ + + +++ + Y+ NE G+ + C CG I K+ G CN M C C + CW+
Sbjct: 122 CPLCLLSQPRCHFPRLSSCSHRACSDCLRQYLRIEISESRVGIAC--PQCPETLAPLDVRAILD--DSALLERFEEYQLRRFLAADPDTRWCPAPDCSYAVI------AYGCAECPKLSCGREGCDTEFCYHCRQLWHPNQTCDQARRQRARHTSGSNDPTLYVFNEEAGGDAEEIKACPRCGAYIMKTNDGSCNRMNCTVCACQFCWL 320
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Match: SMESG000061945.1 (SMESG000061945.1) HSP 1 Score: 717.998 bits (1852), Expect = 0.000e+0 Identity = 363/418 (86.84%), Postives = 371/418 (88.76%), Query Frame = 2
Query: 116 MSDNNFKCQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKTGCIPE 1369
MSDNNFKCQKCESSDLERNEVETLRC HIICWSCLATYIESNLESKICCP+NDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMC VF +C + Y + ++ + DKEYLE MDKNEK+RATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECN KIQDREIHEILNERDSEI NEKCLTLAKSKL NIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKK GGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVN KPCHPTCKTGCIPE
Sbjct: 1 MSDNNFKCQKCESSDLERNEVETLRCGHIICWSCLATYIESNLESKICCPINDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMC---VFA-------QCLI-------------------AYHVKQLIHFLTVNDKEYLETMDKNEKQRATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNVKIQDREIHEILNERDSEIFNEKCLTLAKSKLENIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKWGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNNKPCHPTCKTGCIPE 389
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Match: SMESG000061950.1 (SMESG000061950.1) HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0 Identity = 265/417 (63.55%), Postives = 312/417 (74.82%), Query Frame = 2
Query: 116 MSDNNFKCQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKTGCIP 1366
MS+NN KCQ CESSDLER EVE L+C HIICW+CLATYIESNLESKICCP+NDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMC + +C + Y + + + DKEYLEIMDKNEKERA LL+V+ ++ +S+++ELES G LPNDE FTCL C KIIPKGSGVKL NC+HMFCR+CL SI +S IPV+CL+ ECN +IQDREI +ILNERD EI +EKC+ LA SK+ N FHCKTP+CKYF I D LK+F CPICHSLNCI CNV+H S+TC++YQ G + +D ++KYIE++I+ G MKC AC CL++K GCNW++C CKLELCWILKIPRWGPKG+ DNSGGC+CGVN KPC P C C P
Sbjct: 1 MSNNNVKCQYCESSDLERIEVEILKCGHIICWNCLATYIESNLESKICCPINDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMC----------VFAQCLI-------------------AYHVKLLIHFLTVNDKEYLEIMDKNEKERAKVKLLEVKRQNILSISEELESYGSLPNDEVFTCLTCLKIIPKGSGVKLMNCYHMFCRDCLKGSINSSQIIPVKCLSAECNWEIQDREIRKILNERDYEIYHEKCMNLAISKMKNNFHCKTPNCKYFCIYDEGLKNFTCPICHSLNCINCNVVHKNSETCKQYQ--DGYPNTIDKHTVKYIEDQIKKGKYMKCPACNCLLEKISGCNWVQCSNCKLELCWILKIPRWGPKGRDDNSGGCKCGVNGKPCDPACTKTCQP 386
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Match: SMESG000069302.1 (SMESG000069302.1) HSP 1 Score: 308.145 bits (788), Expect = 1.000e-100 Identity = 161/405 (39.75%), Postives = 229/405 (56.54%), Query Frame = 2
Query: 164 ERNEVETLRCRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHK-HTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKTGCIPE*R 1375
E+NE+ L+C H CW C+ Y+ NL+ KI CP+ +C++ I D IR+ L D I YE + + +++ +KCLLP C + YTD +Q++C C ++NCI C+A H F C +YQ + T I +E R L +HK T + + E+ +L N F C +C II KG GVKLRNC H+ CR CL I T+ +PV C + C I DREI IL+ D KC L+K + + + C+TP+C+ F + LK F+C C + NC C IH +++C+EY+ D+++K IE+ I G M+C+ C L++K GCNW+KC C LELCW+LK+ RWGPKG+GD SGGC+CGVN CH +C + C P R
Sbjct: 16 EQNELSNLKCNHSFCWKCINCYLNQNLQPKIKCPIKNCNVFIRDSQIRRVLQDELIEKYENLCIGNIDKVHKCLLPECPESIIYTDPEVQYQCHTCKLYNCIKCKAPHNFFTCSQYQAKNNTEKTLICQQEL----------RFALQSLNDKHKLDTRNSLEAFENVDLLSNQVVFECKLCSMIICKGDGVKLRNCSHLLCRPCLTGHINTANVVPVLCPMSYCKNIITDREIQSILSRVDLNSYQTKCANLSKKAINSFYQCQTPNCQAFYEFESKLKEFVCRKCQNKNCTECKTIHT-NESCQEYR-----NKMQKDVTLKSIESRILNGQVMRCLDCKVLLEKVSGCNWVKCHNCSLELCWVLKMRRWGPKGQGDTSGGCKCGVNGVRCHKSCFSSCTPHNR 404
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Match: SMESG000069298.1 (SMESG000069298.1) HSP 1 Score: 302.753 bits (774), Expect = 1.728e-98 Identity = 168/418 (40.19%), Postives = 238/418 (56.94%), Query Frame = 2
Query: 116 MSDNNFKCQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVRHKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDCKYF-GICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKTGCIP 1366
MS + C C+ E +E+ L HI+C CL YI NL I CP+ DC ++ D IR A D+ IT E +S++ LE Y C+LP CG + Y + IQ+EC C++FNCI+C+++HP L+C+ ++ + + I + E RA +L H + E+ +L N+E F C C I KG GVKLRNC+H+ C+ CL +KT + IP +C + C I+DREI IL+ + EI N+K + KSKL N + C+TPDC Y I D +K+ CP C +NC++C+ +H ++TC +++ K S + + IE I+ G CM C C LI+K GCNW++C C +ELCWIL++ RWGP G+GD SGGCRC VN PCH C GCIP
Sbjct: 1 MSSEDLYCFICQDEK-ELSEIIKLHGEHIVCLVCLKNYIHENLGINIKCPVPDCDFNLTDSEIRCASNDDDITHLELLSINVLESTYTCILPECGCRIAYESENIQYECVKCTLFNCIACKSSHPHLSCKEFRKLDEAQANKICEPEL---------SRARKILQNKIHCENRKIILEMSKIDLLMNNEIFECFSCYTCIAKGQGVKLRNCYHLVCKTCLENYLKTISKIPPKCPHAYCKLTIEDREIKAILSGNEYEIYNQKLINSIKSKLENRYQCQTPDCTYICEIIDVKMKTLKCPNCKMVNCLLCHAVHK-NETCAKFR--KRIDSTAFGATQRAIEERIKKGECMMCPDCNSLIQKVRGCNWIQCSSCGVELCWILQMHRWGPGGRGDTSGGCRCMVNDIPCHKDC-GGCIP 404
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Match: SMESG000069303.1 (SMESG000069303.1) HSP 1 Score: 260.381 bits (664), Expect = 3.338e-82 Identity = 161/422 (38.15%), Postives = 225/422 (53.32%), Query Frame = 2
Query: 137 CQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPMNDCHISINDGIIRKALPDNRITDYEFMSLSKLEQCYKCLLPMCGNLVFYTDKAIQFECSVCSMFNCISCEATHPFLNCQRYQIMKISALTNIKDKEYLEIMDKNEKERATAVLLQVR--HKHTVSVAQELESCGILPNDETFTCLICCKIIPKGSGVKLRNCHHMFCRNCLNESIKTSATIPVQCLNNECNAKIQDREIHEILNERDSEILNEKCLTLAKSKLANIFHCKTPDC-KYFGICDPDLKSFICPICHSLNCIICNVIHNGSQTCEEYQLSKGNYSAVDDMSIKYIENEIQAGNCMKCVACGCLIKKSGGCNWMKCPQCKLELCWILKIPRWGPKGKGDNSGGCRCGVNKKPCHPTCKTG-CIPE*R*IYHF 1390
C KC LE +E L+C H+ CW C Y++SN+ SKI CP C I DG+IR+ + + I YE L K + C L C N V YTD +IQ+EC CS+ NCISC+A H + C ++ S I + E+++ ++L+ R +K+ S+ E E +L NDE F+C IC G G+KL+NC H C CL I IP+ C + CN I DREI +L+ D ++ + +C A + +F CK PDC Y I + ++K F C C +NC+ C+ IH G TC+ +Q K + +NEI M+C C + K+ GCNW++CP C +ELCWI K+ RWGP G+GD SGGCRC V++KPCH CK C PE R ++
Sbjct: 6 CLKCLDGKLE-SEFVKLKCGHLYCWVCANEYVKSNISSKIKCPHQSCPTLIRDGVIRQVIFGDDIEKYENAVLCKTNM-FFCSLKDCRNPVSYTDPSIQYECMKCSLINCISCKAPHELIKCLDFKSKSKSEQEAISEAEFVK----------AGIILETRMANKNRESLL-EFEEINLLKNDEIFSC-ICDIQFGIGKGIKLQNCFHNICEPCLKNYIMRCDRIPISCPH--CNLLINDREIKSVLSSSDFQMYHRRCKNSAIQHIGRVFQCKQPDCDNYCEITNDEIKEFKCTQCKKVNCLACSAIHTGD-TCKSFQSRKSKIVS---------KNEI-----MECPKCHMSLYKTRGCNWIQCPTCHVELCWIRKMLRWGPNGRGDTSGGCRCMVDEKPCHENCKQPYCTPENRPLFQL 396 The following BLAST results are available for this feature:
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of RanBP-type and C3HC4-type zinc finger containing 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005885 ID=SMED30005885|Name=RanBP-type and C3HC4-type zinc finger containing 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1443bpback to top protein sequence of SMED30005885-orf-1 >SMED30005885-orf-1 ID=SMED30005885-orf-1|Name=SMED30005885-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=419bp MSDNNFKCQKCESSDLERNEVETLRCRHIICWSCLATYIESNLESKICCPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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