Ribosome biogenesis protein BOP1

Overview
NameRibosome biogenesis protein BOP1
Smed IDSMED30005828
Length (bp)2359
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ribosome biogenesis protein BOP1 (SMED30005828) t-SNE clustered cells

Violin plots show distribution of expression levels for Ribosome biogenesis protein BOP1 (SMED30005828) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ribosome biogenesis protein BOP1 (SMED30005828) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ribosome biogenesis protein BOP1 (SMED30005828) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30005828

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30005828h1SMcG0011001 SmedASXL_013955SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30005828h1SMcG0011001 SmedASXL_013955SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
zeta neoblastSMED30005828h1SMcG0011001 dd_Smed_v4_11041_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Human
Match: BOP1 (BOP1 ribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:15519])

HSP 1 Score: 286.189 bits (731), Expect = 1.229e-84
Identity = 218/727 (29.99%), Postives = 363/727 (49.93%), Query Frame = 2 
Query:   41 TENFNMIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLK-HVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPL--IPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRN-------PSLAWHPQ--CNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEK--LDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            TE  +    +EY  DSSDEEDI+NT+GNVP+EWY + PH+GYD+ GR + K    +  +D F+D +++ D    ++DP+TG+++ L+D+ + L++ L S + F  +  +  E   ++F+ DVM  PV+ RP  K+SFIPS+ ++++VS+M++AIKMG +    P D      S YD           +PN      K HV A  L                            LPGH ESYNPP EYLL+E+E+  L     +P        GER L  +P  +P+LR+VP     I E+ +R  DL    R  K +V+   E ++ + +P   DL+PFP           D++  L+VS  G+++             ++G D  S +RL+ ++          +R         S+AW+P     L+A AV   V+++NP L           ++    ++ +  + +  EEP  +  +    W+    E  +RQ  L  L I   + +  ++WH  GDY   +     +T    +V IH+LS+  S +PF  +        FH  +  P L +A  +  ++++Y L +++L K L       S + +HP  +++I G+++ K+ WFDLD+   P++ L  ++ ++R++     YPL A G+ +GSV+  +  VY+   +NPL+VPV + +   L + + +  V F P    ++S G D T+R F
Sbjct:  111 TEMASARIGDEYAEDSSDEEDIRNTVGNVPLEWYDDFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDDPDYWRTVQDPMTGRDLRLTDEQVALVRRLQSGQ-FGDVGFNPYEPAVDFFSGDVMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIQPRRPRDPTP---SFYDLWAQE------DPNAVLGRHKMHVPAPKL---------------------------ALPGHAESYNPPPEYLLSEEER--LAWEQQEP--------GERKLSFLPRKFPSLRAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPK-LPRPRDLQPFPTCQALVYRGHSDLVRCLSVSPGGQWL-------------VSGSDDGS-LRLWEVATAR------CVRTVPVGGVVKSVAWNPSPAVCLVAAAVEDSVLLLNPALGD---------RLVAGSTDQLLSAFVPPEEPPLQPAR----WLEASEE--ERQVGL-RLRICHGKPVTQVTWHGRGDYLAVV----LATQGHTQVLIHQLSRRRSQSPFRRSHGQVQRVAFHPAR--PFLLVA--SQRSVRLYHLLRQELTKKLMPNCKWVSSLAVHPAGDNVICGSYDSKLVWFDLDLSTKPYRMLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHVLTRDLGVLDVIFHPTQPWVFSSGADGTVRLF 745
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Human
Match: BOP1 (BOP1 ribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:15519])

HSP 1 Score: 286.189 bits (731), Expect = 1.229e-84
Identity = 218/727 (29.99%), Postives = 363/727 (49.93%), Query Frame = 2 
Query:   41 TENFNMIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLK-HVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPL--IPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRN-------PSLAWHPQ--CNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEK--LDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            TE  +    +EY  DSSDEEDI+NT+GNVP+EWY + PH+GYD+ GR + K    +  +D F+D +++ D    ++DP+TG+++ L+D+ + L++ L S + F  +  +  E   ++F+ DVM  PV+ RP  K+SFIPS+ ++++VS+M++AIKMG +    P D      S YD           +PN      K HV A  L                            LPGH ESYNPP EYLL+E+E+  L     +P        GER L  +P  +P+LR+VP     I E+ +R  DL    R  K +V+   E ++ + +P   DL+PFP           D++  L+VS  G+++             ++G D  S +RL+ ++          +R         S+AW+P     L+A AV   V+++NP L           ++    ++ +  + +  EEP  +  +    W+    E  +RQ  L  L I   + +  ++WH  GDY   +     +T    +V IH+LS+  S +PF  +        FH  +  P L +A  +  ++++Y L +++L K L       S + +HP  +++I G+++ K+ WFDLD+   P++ L  ++ ++R++     YPL A G+ +GSV+  +  VY+   +NPL+VPV + +   L + + +  V F P    ++S G D T+R F
Sbjct:  111 TEMASARIGDEYAEDSSDEEDIRNTVGNVPLEWYDDFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDDPDYWRTVQDPMTGRDLRLTDEQVALVRRLQSGQ-FGDVGFNPYEPAVDFFSGDVMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIQPRRPRDPTP---SFYDLWAQE------DPNAVLGRHKMHVPAPKL---------------------------ALPGHAESYNPPPEYLLSEEER--LAWEQQEP--------GERKLSFLPRKFPSLRAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPK-LPRPRDLQPFPTCQALVYRGHSDLVRCLSVSPGGQWL-------------VSGSDDGS-LRLWEVATAR------CVRTVPVGGVVKSVAWNPSPAVCLVAAAVEDSVLLLNPALGD---------RLVAGSTDQLLSAFVPPEEPPLQPAR----WLEASEE--ERQVGL-RLRICHGKPVTQVTWHGRGDYLAVV----LATQGHTQVLIHQLSRRRSQSPFRRSHGQVQRVAFHPAR--PFLLVA--SQRSVRLYHLLRQELTKKLMPNCKWVSSLAVHPAGDNVICGSYDSKLVWFDLDLSTKPYRMLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHVLTRDLGVLDVIFHPTQPWVFSSGADGTVRLF 745
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Human
Match: BOP1 (BOP1 ribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:15519])

HSP 1 Score: 136.346 bits (342), Expect = 9.863e-36
Identity = 66/157 (42.04%), Postives = 108/157 (68.79%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPED 538
            +EY  DSSDEEDI+NT+GNVP+EWY + PH+GYD+ GR + K    +  +D F+D +++ D    ++DP+TG+++ L+D+ + L++ L S + F  +  +  E   ++F+ DVM  PV+ RP  K+SFIPS+ ++++VS+M++AIKMG +    P D
Sbjct:   50 DEYAEDSSDEEDIRNTVGNVPLEWYDDFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDDPDYWRTVQDPMTGRDLRLTDEQVALVRRLQSGQ-FGDVGFNPYEPAVDFFSGDVMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIQPRRPRD 205
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Human
Match: BOP1 (BOP1 ribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:15519])

HSP 1 Score: 136.346 bits (342), Expect = 9.863e-36
Identity = 66/157 (42.04%), Postives = 108/157 (68.79%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPED 538
            +EY  DSSDEEDI+NT+GNVP+EWY + PH+GYD+ GR + K    +  +D F+D +++ D    ++DP+TG+++ L+D+ + L++ L S + F  +  +  E   ++F+ DVM  PV+ RP  K+SFIPS+ ++++VS+M++AIKMG +    P D
Sbjct:   50 DEYAEDSSDEEDIRNTVGNVPLEWYDDFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDDPDYWRTVQDPMTGRDLRLTDEQVALVRRLQSGQ-FGDVGFNPYEPAVDFFSGDVMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIQPRRPRD 205
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Celegans
Match: Y48B6A.1 (Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A9])

HSP 1 Score: 236.884 bits (603), Expect = 1.470e-67
Identity = 202/711 (28.41%), Postives = 329/711 (46.27%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEK--LPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCNLLALAVASK-VVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTPSVMEMHPTEN--HLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVD---MYSVCFDPKSLRLYSGGKDKTIRGF 2173
            +EYD+DSSDEED++NTIGN+P++WY +  HIGYD  G  + K    KG +++F++ +E+ D    + D  TG +V L+D+ I  I  + + + + ++  +  E   + F+      P+  RP  K  FIPS  + + VS+M++AIKMG    P  + ++             +  D+W            S + L         D  TK Q  R  +  P  K  LP H ESYNPPEEY+ +++E+K      ++ +    R +     +P+ Y  LR VP     I E+ +R  DL  A R  K ++H+    +L  ++P+ NDL+PFP  + F        + ++ V      +   G E  T+   +       I     I  F  D E  ++    +A      LLA+A   K V I+N G       D L ++  E         +L  E P    T    +  ++    +K +     L++++   +  ++WHS GDYF ++            V +H+LSK  S  PF   K       FH  +    LF+A     +++ YDLA+  LVK L +TG   +  M    N  +L +G  + + CW DL MG  P+K L  +  +VRS+   + YPL+A  + +G+ + +Y+++Y+ F K+  + PV      +K  +   M    + P    L + G D TI  F
Sbjct:   47 DEYDYDSSDEEDLRNTIGNIPIKWYDDEDHIGYDKFGEKIAK-PAKKGEIETFLEKMEDPDYWRKVFDKQTGTDVKLTDEQIEKIHNIATGK-YPTIGYNPYEPFLDIFSSQKEIHPIDNRPEPKSRFIPSKDEMRMVSRMVHAIKMGWAKGPRAKKEEH------------KSYDLW-----------ASEDAL---------DNVTKSQLSRMRVHMPAPKVALPTHAESYNPPEEYIFDDEERKK-----WEEAEKEDRVLN---FMPSKYDALRKVPQYDKFITERFERCLDLYLAPRQRKMRIHADPTDLL-PDLPNPNDLRPFPTTLAFYMRGHTGQVRAITVEPERGELLASGGEDGTVRIWM-------IATGRCIKTFQMDGEVTSVSFSPVA---DRTLLAVAYEGKYVAILNTGCG-----DRLHVQQTE---------ALLAETP----TDAQEDGAVVTWRKSKEK-----LMLKMPNEVRQVTWHSKGDYFASV----AIDDIAKSVYVHQLSKAKSQCPFQKRKGHVQAVTFHPTQ--ARLFVA--TKIHVREYDLARCVLVKKL-ITGCKHISTMATDANGENLFLGGLDRRFCWMDLQMGNKPWKKLKHHTAAVRSVAYHKKYPLLATVSDDGTAMVYYARIYTDFVKDNELYPVKRLRAHEKTPNDLCMLHTTWHPTQPWLITAGADGTIALF 672
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Fly
Match: CG5033 (gene:FBgn0028744 transcript:FBtr0089550)

HSP 1 Score: 305.064 bits (780), Expect = 1.508e-91
Identity = 217/706 (30.74%), Postives = 356/706 (50.42%), Query Frame = 2 
Query:   77 DFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAW--HPQCNLLALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDK--AVDMYSVCFDPKSLRLYSGGKDKTIR 2167
            D D+SDEEDI+NT+GN+PM WY    HIGYD   + ++K       +D F+  +E+ D    +KDPLTGQ+V L+D+DI LIK + S R     H + E ++  WFT +V   P+   P  K+SF+PS+S++KRVS+M++A+KMG M   E  +++K       F M      +W  +  ++ ++                        I   +  P   LPGH ESYNPP EYL + KE K  +    +P             +P  + +LR VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+Y+ V G +  T+           I  + +       + D  +R   +AW  +P+ +++A+A  ++++++NP +      K +DDL   + E  S  V           S++ K +  W   + +    QE+   ++I   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++LVK L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+     YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K     +  V + P    ++S G D TIR
Sbjct:  150 DSDTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDAKKIIKPPQG-DQIDEFLRKIEDPDFWRTVKDPLTGQDVRLTDEDIALIKRIVSGRIPNKDHEEYEPWIE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQAKRGPKFYM------LWETDTSREHMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDAKETKEWLKLKDEPHKRKLH------FMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTVESMVYRGHTDLVRSVSVEPKGEYL-VSGSDDKTV----------KIWEIATGRCIRTIETDEVVR--CVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVKKTDDL---LAEAPSQDVI---------ESERIKTAVQWSNAEAD---EQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQFVLFHPVK--PCFFVA--TQHNIRIYDLVKQELVKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVNWHPVQPWVFSTGADSTIR 781
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Zebrafish
Match: bop1 (BOP1 ribosomal biogenesis factor [Source:NCBI gene;Acc:777627])

HSP 1 Score: 291.967 bits (746), Expect = 1.412e-86
Identity = 209/709 (29.48%), Postives = 362/709 (51.06%), Query Frame = 2 
Query:   62 QENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKE-DLTIRNPSLAWHPQCNLLALAVA--SKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIR 2167
            Q +EYD D+SDEEDI+NT+GN+PMEWYK+ PHIGYD+ G+ + K    K  +D F+D +EN D    ++D +TG ++ LSD+ + L+  L   + F  ++ +  E   ++F+ +VM  PV+ RP  K+SFIPS+ ++++V K+++AIKMG +    P                                K  + +Y +   KE   D  +     +  +  P  KLPGHEESYNPP EYLL+E+E+    ++  DP     R++     +P  +  LR+VP  +  I E+ +R  DL    R  K +V+ + E ++ + +P   DL+PFP            ++ S++VS  G+++             ++G D  + +R + +S     K   +      +AW+P  ++  +AV+    V+++NP L      D L     +   +S        E+P          W++ + EG ++  R   L+++  + +  ++WH+ GDY   +      +SS  +V IH++SK  +  PF  +K       FH  +  P  F+A      ++VY+L +++L K L       S M +HP  +++I G+++ ++ WFDLD+   P+K L  ++ ++RS++   +YPL+A G+ +GSV+  +  VY+   +NPL+VPV + +   +   + +  V F P    ++S G D TIR
Sbjct:  156 QVDEYDHDTSDEEDIRNTVGNIPMEWYKDYPHIGYDLDGKKIFKPIRNKDELDEFLDKMENPDYWRTVQDKMTGADIRLSDEQVDLVHRLQQGK-FGDVNFNEYEPAVDFFSNEVMIHPVTNRPQDKRSFIPSLIEKEKVGKLVHAIKMGWIKPRRP--------------------------------KETTPQYYDLWAKE---DPNSILGRHKMHVPAPKMKLPGHEESYNPPPEYLLSEEERLAWAAQ--DPED---RKLS---FLPQKFSCLRAVPAFSRFIHERFERCLDLYLCPRQRKMRVNVNPEDLIPK-LPKPKDLQPFPTTQSLVYRGHSSLVRSISVSPSGQWL-------------VSGSDDCT-VRFWEVSTARCLKTVQVGGAVKGVAWNPNPSICLVAVSYEDSVLLLNPALG-----DRLLCTATDQLISSYAEPEEVKEQPV--------QWLVSEGEGHEQGHR---LVLKHPKAVRQVTWHAKGDYLACV---LPDSSSSVQVLIHQVSKRRTQNPFRKSKGLVQCVSFHPVR--PYFFVA--TQRYVRVYNLIKQELTKKLMANCKWISSMAIHPGGDNVICGSYDCRLAWFDLDLSTKPYKVLRHHKKALRSVSFHSHYPLLASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLKGHSITHDLGVLDVTFHPTQPWVFSSGADATIR 782
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Mouse
Match: Bop1 (block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460])

HSP 1 Score: 258.07 bits (658), Expect = 1.436e-74
Identity = 210/727 (28.89%), Postives = 358/727 (49.24%), Query Frame = 2 
Query:   41 TENFNMIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLI----KGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLK-HVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPL--IPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKE---DLTIRNPSLAWHPQCN--LLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEK--LDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            TE    + ++EY+ DSSDEEDI+NT+GNVP+ WY   PH+GYD+ G+ + K    +  +D F+D +++ D    ++D +TG+++ L+D+ + L+    +G     GF     +  E   ++F+ D+M  PV+ RP  K+SFIPS+ ++++VS+M++AIKMG +    P D      S YD           +PN      K HV A                           P   LPGH ESYNPP EYL  E+E+   +           ++  ER L  +P  +P+LR+VP  +  I E+ +R  DL    R  K +V+   E ++ + +P   DL+PFP           D++  L+VS  G+++A             +G D    ++L+ ++     K       +R  S+AW+P     L+A A+   V+++NP L           ++    ++ +  +    EEP+ +  +    W+ +  E  +R  RL    I   + +  ++WH  GDY   +     S+    +V +H++S+  S +PF  +        FH  +  P L +A  +  +I++Y L +++L K L       S M +HP  +++I G+++ K+ WFDLD+   P+K L  ++ ++R++     YPL A G+ +GSV+  +  VY+   +NPL+VPV + +   L + + +  V F P    ++S G D TIR F
Sbjct:   97 TEEAGALAQDEYEEDSSDEEDIRNTVGNVPLAWYDEFPHVGYDLDGKRIYKPLRTRDELDQFLDKMDDPDFWRTVQDKMTGRDLRLTDEQVALVHRLQRGQFGDSGF-----NPYEPAVDFFSGDIMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIKPRRPHDPTP---SFYDLWAQE------DPNAVLGRHKMHVPA---------------------------PKLALPGHAESYNPPPEYLPTEEERSAWMQ----------QEPVERKLNFLPQKFPSLRTVPAYSRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPK-LPRPRDLQPFPVCQALVYRGHSDLVRCLSVSPGGQWLA-------------SGSDD-GTLKLWEVATARCMKTVHVGGVVR--SIAWNPNPTICLVAAAMDDAVLLLNPALGD---------RLLVGSTDQLLEAFTPPEEPALQPAR----WLEVSEEEHQRGLRLR---ICHSKPVTQVTWHGRGDYLAVV----LSSQEHTQVLLHQVSRRRSQSPFRRSHGQVQCVAFHPSR--PFLLVA--SQRSIRIYHLLRQELTKKLMPNCKWVSSMAVHPAGDNIICGSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHTLTRDLGVLDVAFHPTQPWVFSSGADGTIRLF 731
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Mouse
Match: Nedd1 (neural precursor cell expressed, developmentally down-regulated gene 1 [Source:MGI Symbol;Acc:MGI:97293])

HSP 1 Score: 51.6026 bits (122), Expect = 3.393e-6
Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 2 
Query: 1718 LLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP-SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGS 2002
            LLF+       I +YD + KKLVKTL V  TP + ++  P    L +G+  GKI  +DL M  SP KT++ ++ SV+ I    +  L     + GS
Sbjct:  220 LLFVTIGLDKRIILYDTSSKKLVKTL-VADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTSLTKASLSKGS 314
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Match: sp|B4MYI5|BOP1_DROWI (Ribosome biogenesis protein BOP1 homolog OS=Drosophila willistoni OX=7260 GN=GK22227 PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.803e-94
Identity = 230/716 (32.12%), Postives = 368/716 (51.40%), Query Frame = 2 
Query:   62 QENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMK-ISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSIS----VFNPDKEDLTIRNPSLAWHPQCNL--LALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVD--MYSVCFDPKSLRLYSGGKDKTIR 2167
            QE E D D+SDEEDI+NT+GN+PM WY    HIGYD  G  ++K I G +  +D F+  +E+ D    +KDP TGQ VVLSD DI LIK + S+R   + H + E ++  WFT +V   P+   P  K+SF+PS+S++KRVS+M++A+KMG M   E  +++K       F M      +W  +  ++ ++                        I   +  P   LPGH ESYNPP EYL +EKE K  +    +P             +P  + +LR VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+Y+             ++G D    ++++ I+    +   + ED+ +R   +AW P   L  +A+A  S+++++NP +      K +DDL   + E  SN      +D+E     + K +  W   +      QE+   +II   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++L+K L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+     YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K  D  +  VC+ P    ++S G D TIR
Sbjct:  139 QEYE-DSDTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDGNKIIKPIKGDQ--IDDFLRKIEDPDFWRTVKDPQTGQEVVLSDADIALIKRINSARIPNAEHEEYEPWIE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQQKRGPKFYM------LWETDTGREQMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDEKETKQWLKLKDEPHKRKLH------FMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTVESLVYRGHTDLVRSVSVEPKGEYM-------------VSGSDD-KTVKIWEIATGRCIRTIETEDV-VR--CVAWCPNAKLSIIAVATGSRLLLVNPKVGDKLLIKKTDDL---LAEEPSNQ---DIIDNE-----RIKTAVQWSTAE---AAEQEKGVRVIINHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQCVLFHPVK--PCFFVA--TQHNIRIYDLVKQELIKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDDFGVLDVCWHPVQPWVFSTGADCTIR 775
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Match: sp|B3MHX6|BOP1_DROAN (Ribosome biogenesis protein BOP1 homolog OS=Drosophila ananassae OX=7217 GN=GF11675 PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 2.314e-91
Identity = 220/716 (30.73%), Postives = 360/716 (50.28%), Query Frame = 2 
Query:   74 YDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSIS----VFNPDKEDLTIRNPSLAWHPQCNL--LALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSS-----KKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVD--MYSVCFDPKSLRLYSGGKDKTIR 2167
            +D D+SDEEDI+NT+GN+PM WY    HIGYD   + ++K       +D F+  +E+ +    +KDP TGQ V+++D+DI LIK + S R     H + E +V  WFT +V   P+   P  K+SF+PS+S++KRV +M++A+KMG M   E  +++K       F M      +W  +  ++ ++                        I   +  P   LPGH ESYNPP EYL +E+E K  +    +P             +P  + +LR+VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+YI             ++G D    ++++ I+    +   + ED+ +R   +AW P   L  +A+A  +++++INP +      K +DDL                   EEPSS     ++ K +  W   +P     QE+   ++I   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++LVK L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+     YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K  D  +  V + P    ++S G D TIR
Sbjct:  158 HDSDTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDAKKIVKPPQG-DQIDEFLRKIEDPNFWRTVKDPQTGQEVLITDEDIALIKRIISGRIPNKDHNEYEPWVE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKRVGRMVHALKMGWMKTTEEVEREKQAKRGPKFYM------LWETDTSREHMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDERETKEWLKLKDEPHKRKLH------FMPQKFTSLRAVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTIESLVYRGHTDLVRSVSVEPKGEYI-------------VSGSDD-KTVKIWEIATGRCIRTIETEDV-VR--CVAWCPNAKLSIIAVATGNRLLLINPKVGDKVLVKKTDDLLA-----------------EEPSSDVIESERIKAAVQWATAEP---AEQEKGVRVVINHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQCVLFHPVK--PCFFVA--TQHNIRIYDLVKQELVKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKREDFGVLDVNWHPIQPWIFSTGADCTIR 790
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Match: sp|B4LKS9|BOP1_DROVI (Ribosome biogenesis protein BOP1 homolog OS=Drosophila virilis OX=7244 GN=GJ22246 PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 2.892e-91
Identity = 219/712 (30.76%), Postives = 363/712 (50.98%), Query Frame = 2 
Query:   77 DFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKG-AVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISV---FNPDKEDLTIRNPSLAWHPQCNL--LALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDK--AVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            D D+SDEEDI+NT+GN+PM WY    HIGYD   + ++K    KG  +D F+  +E+ +    +KDP TGQ V+L+D+DI LIK + S R   + H +   ++  WFT +V   P+   P  K+SF+PS+S++K+VS+M++A+KMG M   E  +++K       F M      +W  +  +++++                        I   +  P   LPGH ESYNPP EYL +EKE K  + +  +P             +P  + +LR VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+Y+A             +G D    ++++ I+        + +  +R   +AW P   L  +A+A  S++++INP +      K +DDL        + S +L  +D+E     + K +  W   +PE    QE+   ++I   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++L+K L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+     YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K     +  V + P    ++S G D TIR +
Sbjct:  146 DSDTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDAKKIVK--PPKGDQIDDFLRKIEDPNFWRTVKDPQTGQEVLLTDEDIALIKRVNSGRIPNAEHDEYAPWIE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKKVSRMVHALKMGWMKTTEEVEREKQKKRGPKFYM------LWETDTGRESMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDEKETKEWLKQKDEPHKRKLH------FMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTVESLVYRGHTDLVRSVSVEPKGEYMA-------------SGSDD-KTVKIWEIATGRCIRTIETNDVVR--CVAWCPNAKLSIIAVATGSRLLLINPKVGDKLLIKKTDDL-------LAASPSLDVIDNE-----RIKTAVQWSNAEPE---EQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQCVLFHPVK--PCFFVA--TQHNIRIYDLVKQELIKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVSWHPVQPWVFSTGADCTIRLY 779
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Match: sp|B4HN85|BOP1_DROSE (Ribosome biogenesis protein BOP1 homolog OS=Drosophila sechellia OX=7238 GN=GM21825 PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 3.212e-91
Identity = 217/706 (30.74%), Postives = 357/706 (50.57%), Query Frame = 2 
Query:   77 DFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAW--HPQCNLLALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDK--AVDMYSVCFDPKSLRLYSGGKDKTIR 2167
            D D+SDEEDI+NT+GN+PM WY    HIGYD   + ++K       +D F+  +E+ D    +KDPLTGQ+V L+D+DI LIK + S R     H + E ++  WFT +V   P+   P  K+SF+PS+S++KRVS+M++A+KMG M   E  +++K       F M      +W  +  ++ ++                        I   +  P   LPGH ESYNPP EYL + KE K  +    +P             +P  + +LR VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+Y+ V G +  T+           I  + +       + D  +R   +AW  +P+ +++A+A  ++++++NP +      + +DDL   + E  S  V           S++ K +  W   + +    QE+   ++I   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++LVK L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+   R YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K     +  V + P    ++S G D TIR
Sbjct:  150 DSDTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDAKKIIKPPQG-DQIDEFLRKIEDPDFWRTVKDPLTGQDVRLTDEDIALIKRIVSGRIPNKDHEEYEPWIE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQAKRGPKFYM------LWETDTSREHMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDAKETKEWLKLKDEPHKRKLH------FMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTVESMVYRGHTDLVRSVSVEPKGEYL-VSGSDDKTV----------KIWEIATGRCIRTIETDEVVR--CVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVQKTDDL---LAEAPSQDVI---------ESERIKTAVQWSNAEAD---EQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQFVLFHPVK--PCFFVA--TQHNIRIYDLVKQELVKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHRRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVNWHPVQPWVFSTGADSTIR 781
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Match: sp|B4KQU8|BOP1_DROMO (Ribosome biogenesis protein BOP1 homolog OS=Drosophila mojavensis OX=7230 GN=GI19116 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 7.899e-91
Identity = 219/707 (30.98%), Postives = 360/707 (50.92%), Query Frame = 2 
Query:   83 DSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKG-AVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCNL--LALAVASKVVIINPGLNSS---KDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDK--AVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            D+SDEEDI+NT+GN+PM WY    HIGYD   + ++K    KG  +D F+  +E+ +    +KDP+TGQ V+L+D+DI LIK + SSR     H +   ++  WFT +V   P+   P  K+SF+PS+S++K+VS+M++A+KMG M   E  +++K       F M      +W  +  ++ ++                        I   +  P   LPGH ESYNPP EYL +EKE K  +    +P             +P  Y +LR+VP  +  + E+  R  DL    R  + K++   E ++ + +PS  DL+PFP +         D++ S++V   G+Y+ V G +  T+           I  + +       + +  +R   +AW P   L  +A+A  S++++INP +      K +DDL        + S NL  ++     S++ K +  W   +P+    QE+   ++I   + I  ++WH  GDY  T+  +G + S+     IH+LSK  S  PFS +K       FH  K  P  F+A     NI++YDL +++L+K L       S M +HP  ++L+V T++ K+ WFDLD+   P++T+ ++RN+VRS+     YPL A G+ + +V+  +  VY+   +NPL+VP+   +  +K     +  V + P    ++S G D TIR +
Sbjct:  160 DTSDEEDIRNTVGNIPMHWYDEYKHIGYDWDAKKIIK--PPKGDQIDDFLRKIEDPNFWRTVKDPMTGQEVLLTDEDIALIKRVNSSRIPNPEHDEYAPWIE-WFTSEVEKMPIKNVPDHKRSFLPSVSEKKKVSRMVHALKMGWMKTTEEVEREKQQKRGPKFYM------LWETDTGREHMRR-----------------------IHDPVSAPKRDLPGHAESYNPPPEYLFDEKETKEWLKLKDEPHKRKLH------FMPQKYKSLRAVPAYSRYLRERFLRCLDLYLCPRAKRVKLNIDAEYLIPK-LPSPRDLQPFPTVESLVYRGHTDLVRSVSVEPKGEYL-VSGSDDKTV----------KIWEIATGRCIRTIETNDVVR--CVAWCPNAKLSIIAVATGSRLLLINPKVGDKLLIKKTDDL-------LAESPNLDIIE-----SERIKTAVQWSNAEPD---EQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSAL----IHQLSKRRSQIPFSKSKGLIQCVLFHPVK--PCFFVA--TQHNIRIYDLVKQELIKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVTWHPVQPWVFSTGADCTIRLY 791
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BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Match: A0A4S2LPQ0 (BOP1NT domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005752 PE=3 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 1.638e-106
Identity = 257/834 (30.82%), Postives = 415/834 (49.76%), Query Frame = 2 
Query:   56 MIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVD--------KTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNE-EYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMG-------RMAFPEPEDKDKV--------------LDSDYD---------FIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRP---------PPEKLPGHEESYNPPEEYLLNEKEKKILI----SRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFT-TISQDVILSLNVSCCGKYIAVV--GYEYLTIYHN-------------------------LNGVDPLSIIRLYSISVFNPDK-------EDLTIRNPS--LAWH--PQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSL------------DDEEPS-SKKTKLSN------NW-------ILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLT----IXXXXXXXXXXXXVQIHRLSKC--ASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP---SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            M Q +EYDFDSSDEED++NTIGN+P++WY +  HIGYD SGRP+++ + A G  DS  + ++ VD        +   ++DP TGQ VVLSD D+ ++  + S RG LS       E  N+WFT+DV++ PV+A PPQK+SFIPS+ DR+RV +M++AIKMG         A  +P D D +              LDSD +         F+ +   PDVW        +K          P E +  ++T++  + Q  RP         P E LPGH  SYNPP E++L++ E+K L+     R YD   +        P +P  +  LR VP+S   + E+++R++DL  A RV K ++ ++ E +L Q IPS + L+P+P+    T    +  + SL++S CG+++A +     YL I+                           ++G    S  +  S S    ++       E+ +   P+  + W+  P+ +LLA A+   + +INPGL      +     +++W++N     S             DDE+   SKK +  +      +W       +++K   +K  ER S + + +D+ +  + WH  GDY L+    I      + S  ++ +HRLSK    S    +     W  A FH     P LF+A   T  +++YDL Q++ ++ L++  T    S M +H +  HLIVGTF+G+  WFD+D+G  PFK L +N  ++R +   RN PL++    +G+++  ++ V       P+++PV L    +   A  ++S  F  +   +Y+GG D ++R F
Sbjct:    1 MTQVDEYDFDSSDEEDVRNTIGNIPVQWYDSFAHIGYDTSGRPIIRPNFADGKSDSIDEFLQRVDTGMGESNLEWRTVQDPQTGQFVVLSDNDLDMVTKMASHRGVLSAGDSGPYEPWNDWFTKDVLEMPVTAHPPQKRSFIPSLLDRRRVGRMVHAIKMGWFKPRLPAWALSDPNDPDALRRYAAYMTSGNLGALDSDEEEDNLGIPSAFVSSYVFPDVWADQDSGPGVK----------PDESENSWRTRFPMLSQDYRPPRPRPYQKAPEEPLPGHIASYNPPPEFILSKDEQKKLMKAWRERLYDGHVSRV-----PPQMPQKFDCLRHVPFSERYLREREERVKDLVMATRVEKQRLATTPEAILPQ-IPSLSQLRPYPSQPGLTYGGHRGRVTSLSISPCGQWLASISPADGYLRIWETSTNYCFRCYSLASPIESRPPPATMKISGSQKKSHQQQESKSDGEQEEQQPCDSDEEWSCERPTAVVVWNPKPELHLLAAAIGQSIFLINPGLCDRVRVEQTNSGLEQWWTNRETEKSQKTAVVEAEGPQNDDEDARPSKKPRTEHIAEEPAHWDLKRQHALVVKSARSKTIER-SRITLTVDQPVCSLDWHPKGDYLLSLSRPILSNELQSRSVRRLLLHRLSKMSSQSPFSSTSKAAEWRQAAFH-PAGKPQLFVASSRT--VRIYDLVQQRELRCLRLDSTGDFLSSMALHISGEHLIVGTFDGRFNWFDIDLGNVPFKKLKLNHGAIRQLDSHRNRPLVSAAMDDGTLLILHATVSDDLLSKPVIIPVQLIRTGQPSGASTIFSTAFHTRQPHVYTGGADGSVRQF 814
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BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Match: A0A183AI76 (BOP1NT domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS6661 PE=3 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 2.633e-106
Identity = 246/801 (30.71%), Postives = 406/801 (50.69%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLM--KISGA--KGAVDSFIDNV-----ENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRM-------AFPEPEDKDKV--------------LDSD---------YDFIMNTRVPDVWNPNYD-KKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNP-CRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDV-ILSLNVSCCGKYIAVVGY--EYLTIYHNLNGVDPLSIIRLYSI---------------SVFNPDKEDLTIRNPSLAWHPQCN--LLALAVASKVVIINPGLNSSKDSDDLELKMKEWY------------------SNSVNLSSLDDEEPSSKKTKLSNNW---------ILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLT----IXXXXXXXXXXXXVQIHRLSKCASLTPFS--GNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTG---TPSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            +EYDFDSSDEEDI+NT+GN+P++WY +  HIGYD SGRP+M  K+ GA     +D ++  V     E+  +   ++DPLT Q VVL D+D+  +  + S +G +      E + N WF++DV++ P++A PPQK+SFIPS+ DR+RV +M++AIKMG M       A  +PED D V              LDSD            I N   PD+W+   D K T    +A  L  L       +  +    R   R P E LPGH  SYNPP E+LL ++E+K +++ + D  ++    +I   PL+P  +  LR VP+S   + E+++R++DL  AARV K+++ ++ E +L   IPS  DL+P+P+            + ++++S CG+++A +     YL ++            R Y +               +    D E+  I    ++W+P+    L+A A+   V +INP L            + +W+                  S++   S L+D      +T  + +W          L+ P  +K  E  + + I +++ I  ++WH  GDY LT    +      + S  ++ +HRLSK +S  PFS     + W   +FH     P +F+A  +   ++VYDL Q+K ++ L++ G   T S M +HP+ +H++ GTF+G+  WFD+D+G  P+K L +   +VR + + R+ PL++    +G+V+  ++ V       P ++PV+L    +   A  + +  F P+   +Y+GG D ++R F
Sbjct:    8 DEYDFDSSDEEDIRNTVGNIPVQWYADFGHIGYDTSGRPIMKSKLGGADLSDKIDEYLSGVSAGLGESGVEWRSVRDPLTDQLVVLGDRDLETVIKIASGKGVMESSEPFEPW-NEWFSKDVLEMPLTAHPPQKRSFIPSLLDRRRVGRMVHAIKMGWMKPNLPSWALQDPEDPDNVRRYAAYLTGGNLGALDSDDEEDTLGIPASAIPNYVFPDMWSDVTDGKATDTTTTAPSLSTLL------HNYRPPRPRPYQRAPEEPLPGHIASYNPPPEFLLTKEEQKRVMNTWRDRVHDGHVSRI--PPLMPQQFACLRHVPFSERYLREREERVKDLIMAARVEKERLATTPEALLPP-IPSLADLRPYPSRAGLVYRGHSGRVTAVSISNCGQWLASISPVDGYLRVWETATNY----CFRTYQLRPPLVDSNNSRQPDHTNAEDDDENQPIETACVSWNPRSEMCLIAAAIGDTVFLINPALGDRVRVQQTNSGLSQWWTSRTVSDHAPEAPSNEDTSSTAKRSRLEDSLSDGAQTSTTPHWSFQSTQPSKTLLSPASSKTTEG-NRVTICINQPICSLNWHPKGDYLLTLSRPVLASAVCSKSTERIYLHRLSKMSSQAPFSVPSRAVEWRQVQFH-PGGKPHVFVA--SPREVRVYDLVQQKELRCLRLDGSADTLSCMTVHPSGDHMVSGTFDGRFLWFDIDLGNVPYKKLGLGHGAVRQLDIHRSRPLVSVALDDGTVLIVHATVSDDLLSKPAIIPVNLIRTGQPSTASSVLATAFHPRQPHVYTGGADGSVRQF 790
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BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Match: C1LGL8 (WD_REPEATS_REGION domain-containing protein OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 7.665e-106
Identity = 247/835 (29.58%), Postives = 407/835 (48.74%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMK---ISGAKGAVDSFIDNVENVDKTT-----IIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNE-EYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRM-------AFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWL-------------PKELQPDYQTKYQSIRQ---------IIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYE--YLTIYHNLNGVDPLSIIRLYSIS-----------------------------------VFNPDKEDLTIRNPSL-----AWHP--QCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYS----NSVNLSSLDDEEPS----------SKKTKLSNN-----------------WILIKPEGTKRQERLSS--------LIIELDETILDMSWHSCGDYFLT----IXXXXXXXXXXXXVQIHRLSKCASLTPFS--GNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP---SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            +EYDFDSSDEED++NT+GN+P++WY +  HIGYD SGRP+MK    +G   A+D F+ N    D  +      I+DP TGQ ++LSD D+ ++       G      +   E    WFT+DVMD P++A PPQK+SFIPS+ DR+RV +M++AIK G +       A  +P + D++    Y   M +  PD+  P+Y+++ L   S +   ++               +  P ++ K   +             R P E LPGH  SYNPP E+LL++ E+K ++ + +             P +P  +  LR VP+S   + E+++R++DL  AAR  K +V ++ E ML   IPS + L+P+P+ +          + SL++S CG+++A +     YL I+            R Y +S                                   V N   +D    +PSL     +W+P  + +LLA A+ +++ IINP L         E  + +W+S    N  N+S L D +            SK+ +L NN                 W +  P  T+   + +         +II + + I+ + WH  GDY LT    I      + S  ++ +HRLSK +S TPFS  G  + W  A FH     P LF+A      +++YDL +++ ++ L++  +    S M +HP+ +HL+VG+++ +  WFD+++G  PFK L +N  ++R + +    PL++   ++G+++  + KV       P+V+PV L    +     +++S  F P+   +YSGG+D +I+ F
Sbjct:    9 DEYDFDSSDEEDVRNTVGNIPLQWYDSLAHIGYDTSGRPIMKPDVYNGKPDAIDEFLRNTNIEDNGSGMDWRCIRDPQTGQLILLSDADLEIVAKSTKGEGITVDSKEGPFETWEEWFTKDVMDMPLTAHPPQKRSFIPSLLDRRRVGRMVHAIKSGWLVPKLPSWALSDPNNVDEL--RRYGAYMASGNPDLLEPDYEEEPLSFSSFDVSTYIFPDVWNNQDNENDQMDATPSWKLKLPMLASDYRPPRPRPYQRAPEEPLPGHIASYNPPPEFLLSKDEEKKVM-KVWRERVRDGHVSRVPPQMPRKFSCLRHVPFSERYLYEREERVKDLIMAARFEKQRVSTTPEAMLPP-IPSLSQLRPYPSHIGLQYGGHTGRVTSLSISPCGQWLASISPSDGYLRIWETSTNY----CFRAYRLSNPCVREKIKMKQQEQVKVIKEPNHNGLQMNDDDEEVMNQPSDDEENWSPSLPTACISWNPNSELHLLAAAIGTQLFIINPALGDRVRVSHTETSLLKWWSEMNENVANISVLTDNKTEDIEETDANIPSKQLRLDNNEMDFDDQLEIEMKTMAKWTIKMPPSTQSMNKAAKSKTFERHRIIITVLDPIISLDWHPKGDYLLTLSRPILSSRVRSRSAKRLLLHRLSKMSSQTPFSDTGKPVEWKQAGFHPTGK-PHLFIASPRA--VRIYDLVEQRELRCLRLESSSNFISSMALHPSGDHLVVGSYDSRFNWFDIELGNVPFKKLQLNHGAIRQLAIHNRRPLVSVALSDGTILIIHGKVIDDLLSKPVVIPVQLIRTGQPSSQSNVFSTVFHPRQPHVYSGGEDGSIKQF 832
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Match: A0A4Z2DHA4 (Ribosome biogenesis protein BOP1 isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_000980 PE=3 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 8.076e-106
Identity = 250/836 (29.90%), Postives = 410/836 (49.04%), Query Frame = 2 
Query:   68 NEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMK---ISGAKGAVDSFIDNVENVDKTT-----IIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNE-EYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRM-------AFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWL-------------PKELQPDYQTKYQSIRQ---------IIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLV--QFTTISQDVILSLNVSCCGKYIAVVGYE--YLTIYHNLNGVDPLSIIRLYSIS-----------------------------------VFNPDKEDLTIRNPSL-----AWHP--QCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYS----NSVNLSSLDDEEPS----------SKKTKLSNN-----------------WILIKPEGTKRQERLSS--------LIIELDETILDMSWHSCGDYFLT----IXXXXXXXXXXXXVQIHRLSKCASLTPFS--GNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP---SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            +EYDFDSSDEED++NT+GN+P++WY +  HIGYD SGRP+MK    +G   A+D F+ N    D  +      I+DP TGQ V+LSD D+ ++       G      +   E    WFT+DVMD P++A PPQK+SFIPS+ DR+RV +M++AIK G +       A  +P + D++    Y   M +  PD+  P+Y++  L   S +   ++               +  P ++ K   +             R P E LPGH  SYNPP E+LL++ E+K ++ + +             P +P  +  LR VP+S   + E+++R++DL  AAR  K +V ++ E ML   IPS + L+P+P+ +  Q++  +  V  SL++S CG+++A +     YL I+            R Y +S                                   V N   +D    +PSL     +W+P  + +LLA A+ +++ IINP L         E  + +W+S    N  N+S L D +            SK+ +L NN                 W +  P  T+   + +         +II + + I+ + WH  GDY LT    I      + S  ++ +HRLSK +S TPFS  G  + W  A FH     P LF+A      +++YDL +++ ++ L++  +    S M +HP+ +HL+VG+++ +  WFD+++G  PFK L +N  ++R + +    PL++   ++G+++  + KV       P+V+PV L    +     +++S  F P+   +YSGG+D +I+ F
Sbjct:    9 DEYDFDSSDEEDVRNTVGNIPLQWYDSLAHIGYDTSGRPIMKPDVYNGKPDAIDEFLRNTNIEDNGSGVDWRCIRDPQTGQLVLLSDADLEIVDKSTKGEGITVDSKEGPFETWEEWFTKDVMDMPLTAHPPQKRSFIPSLLDRRRVGRMVHAIKSGWLVPKLPSWALSDPNNVDEL--RRYGAYMASGNPDLLEPDYEEGPLSFSSFDVSTYIFPDVWSNQDNENDQMDATPSWKLKLPMLASDYRPPRPRPYQRAPEEPLPGHIASYNPPPEFLLSKDEEKKVM-KVWRERVRDGHVSRVPPQMPRKFSCLRHVPFSERYLYEREERVKDLIMAARFEKQRVSTTPEAMLPP-IPSLSQLRPYPSHIGLQYSGHTGRVT-SLSISPCGQWLASISPSDGYLRIWETSTNY----CFRAYRLSNPCVREKIKMKQQEQVKVIKEPNHNGLQMNDDDEEVMNQPSDDEENWSPSLPTACISWNPNSELHLLAAAIGTQLFIINPALGDRVRVSHTETSLLKWWSEMNENVANISVLTDNKTEDIEETDANIPSKQLRLDNNEMDFDDQLEIEMKTMAKWTIKMPPSTQSMNKAAKSKTFERHRIIITVLDPIISLDWHPKGDYLLTLSRPILSSRVRSRSAKRLLLHRLSKMSSQTPFSDTGKPVEWKQAGFHPTGK-PHLFIASPRA--VRIYDLVEQRELRCLRLESSSNFISSMALHPSGDHLVVGSYDSRFNWFDIELGNVPFKKLQLNHGAIRQLAIHNRRPLVSVALSDGTILIIHGKVIDDLLSKPVVIPVQLIRTGQPSSQSNVFSTVFHPRQPHVYSGGEDGSIKQF 832
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Match: A0A504YCK9 (Ribosome biogenesis protein bop1 OS=Fasciola gigantica OX=46835 GN=FGIG_06432 PE=3 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 2.731e-105
Identity = 249/809 (30.78%), Postives = 403/809 (49.81%), Query Frame = 2 
Query:   35 VFTENFNMIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKI----SGAKGAVDSFIDNV-----ENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRM-------AFPEPEDKDKV--------------LDSD---------YDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNP-CRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGY--EYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIR-----------------NPSLAWH--PQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSL-----DDEEPSSKKTKLSNN-----------WILIKPEGTKRQERLSSLIIE-------LDETILDMSWHSCGDYFLT----IXXXXXXXXXXXXVQIHRLSKCASLTPFS--GNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP---SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
              T N      +EYDFDSSDEED++NT+GN+PM+WY N  HIGYD SGRP+MK     S     +D ++ NV     E+  +   ++DPLT Q V+L D+D+  +  + + +G +S  T+  E  N WF++DV+  PV+A PPQK+SFIPS+ DR+RV +M++AIKMG +       A  + ED D V              LDSD            I N   PD+W+ + +  T    + +    L   L  +Y+       Q    P E LPGH  SYNPP E+LL ++E+K ++S + D  ++    +I   PL+P  +  LR VP+S   + E+++R++DL  AARV K ++ ++ E +L   IPS  DL+P+P+            +  + VS CG+++A +     +L I+            R Y +      K D + R                    ++W+  P+  L+A ++   + +INP L            + +W+ NS +L+ L     +D  P  K+++L  N           W        K +    S I E       L++ I  + WH+ GDY LT    +      + S  ++ +HRLSK +S  PF+     + W   +FH     P +F+A  +   I+VYDL Q+K ++ L++ G+    S M +HP+ +HL+ GTF+G+  WFD+D+G  PFK + +   +VR++ +    PL++    +G+V+  ++ V       PL++PV+L    +   A  + +  F P+   +Y+GG D ++R F
Sbjct:    2 AITPNTIAATPDEYDFDSSDEEDVRNTVGNIPMQWYANLGHIGYDTSGRPIMKSRLGDSDVGDKIDEYLSNVSVGVGESGMEWRTVRDPLTDQLVILGDQDLETVIRIAAGKG-VSQGTEPFEPWNEWFSKDVLQMPVTAHPPQKRSFIPSLLDRRRVGRMVHAIKMGWLKPNLPAWALSDTEDPDSVRRYAAYLTGGNLGALDSDDEEDTLGIPASSIPNYVFPDIWS-DLNDGTPDATTTKGPPSLSDLLHNNYRPPRPRPYQRA--PEEPLPGHIASYNPPPEFLLTKEERKRVMSMWRDRVHDGHVSRIP--PLMPEQFACLRHVPFSERYLREREERVKDLLMAARVEKRRLTTTPEALLPP-IPSLADLRPYPSRAGLVYRGHVGRVTDVAVSSCGQWVASISPVDGFLRIWETATNY----CFRAYQLRASASTKADKSKRPKVAGDDDEEEEGGTTDTACVSWNPKPELCLIAASIGDIIYLINPALGDRVRVQQTNSGLLQWW-NSRSLTELMQVSDEDTSPEVKRSRLDENIGDTTAQATPQWSFSSASSDKTRNSRPSKITEGHRVTICLNQPICSLDWHAKGDYLLTLSRPVLSSEILSKSIERIYLHRLSKMSSQAPFAMPSRSVEWRQVQFHPAGK-PHVFVA--SPREIRVYDLLQQKELRCLRLDGSSDALSRMAVHPSGDHLVAGTFDGRFQWFDIDLGNVPFKKMGLGHGAVRNLAVHHTRPLVSVAMDDGTVLVVHATVSDDLLSKPLIIPVTLIRTGQPSTAASVLATTFHPRQPHMYTGGADGSVRQF 795
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Cavefish
Match: bop1 (BOP1 ribosomal biogenesis factor [Source:NCBI gene;Acc:777627])

HSP 1 Score: 192.2 bits (487), Expect = 7.553e-52
Identity = 190/676 (28.11%), Postives = 314/676 (46.45%), Query Frame = 2 
Query:  167 DISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLK-HVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKE-DLTIRNPSLAW--HPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEK--LDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            D  G   +K  G +G V  F   V+         D +TG +V LSD+ + L+  L   + F  ++ +  E   ++F+ +VM  PV+ RP  K+SFIPS+ ++++V K+++AIKMG +    P+D   +    YD           +PN      K HV A                           P  +LPGHEESYNPP EYLL E+E+  L     DP     R++    L+P  +P+LR+VP  T  I E+ +R  DL    R  K +V+ + E ++ + +P   DL P       T     ++ S++V+  G+++             ++G D    +R + ++     K  ++     S+AW  +P   L+A++  + VV++NPGL      D L L   +   +S        EEP+  K +    W L   EGT+ Q+    LI+     +  ++WH  GDY   +       SS  +V IH++SK  +  PF  NK       FH  +  P  F+A     +++VY+L +++L K L       S M +HP  +++I G+++   C    +    P      ++ ++R +   R YPL A G+ +GSV+  +  VY+   +NPL+VPV + +   +   + +  V F P    ++S G D T+R F
Sbjct:   62 DRIGEKSIKRKGTQGFVCIFRRTVQ---------DKMTGSDVRLSDEQVDLVHRLQHGK-FGDINFNEYEPAIDFFSNEVMIHPVTNRPEDKRSFIPSLIEKEKVGKLVHAIKMGWIKPRRPKDSAPLY---YDLWAKE------DPNSILGRHKMHVPA---------------------------PKIRLPGHEESYNPPPEYLLTEEER--LAWEQQDPEE---RKLS---LLPQKFPSLRAVPAFTRFIHERFERCLDLYLCPRQRKMRVNVNPEDLIPK-LPKPKDLHP------CTAGHSSLVRSISVAPGGQWL-------------VSGSDD-GTVRFWEVATARCLKTVEVGGAVKSVAWSPNPAVCLVAISHGNTVVLMNPGLG-----DRLILSATDQLISSY-------EEPTEVKDQ-PVEWSLA--EGTEHQQG-QRLILTHPRAVKQVTWHGKGDYLACV---MPDVSSNVQVVIHQVSKRRTQNPFRKNKGMVQCVSFHPIR--PYFFVA--TQRHVRVYNLIKQELTKKLMTNCKWVSSMAIHPGGDNVICGSYD---CRVLTNSSTDP----EHHKKALRGVAYHRQYPLFASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLKGHTITHDLGVLDVAFHPTQPWVFSSGADGTVRLF 632
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Cavefish
Match: ENSAMXT00000013312.2 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001195.1:160861:216304:1 gene:ENSAMXG00000012949.2 transcript:ENSAMXT00000013312.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 76.6406 bits (187), Expect = 1.532e-15
Identity = 34/63 (53.97%), Postives = 49/63 (77.78%), Query Frame = 2 
Query:   62 QENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVD 250
            Q +EY+ D+SDEEDI+NT+GN+PMEWYK+ PHIGYD+ G+ + K   +K  +D F++ +EN D
Sbjct:  131 QVDEYEQDTSDEEDIRNTVGNIPMEWYKDFPHIGYDLDGKKIFKPIRSKDELDEFLEKMENPD 193
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Sea Lamprey
Match: bop1 (BOP1 ribosomal biogenesis factor [Source:NCBI gene;Acc:777627])

HSP 1 Score: 278.1 bits (710), Expect = 7.381e-84
Identity = 199/698 (28.51%), Postives = 350/698 (50.14%), Query Frame = 2 
Query:   98 EDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLS-LHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQ-DVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDK-EDLTIRNPSLAWHPQCN--LLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFE--KLDKAVDMYSVCFDPKSLRLYSGGKDKTIR 2167
            +DI+NT+GN+P+EWY++ PHIGYD+ G+ ++K   +K  +D F+D ++N D    ++D +TG +V+L+D+ + LI  L   RG L+ ++ D  E   ++FT + M  PV+ RP  K+SFIPS+ ++++VSK+++AIKMG +    P ++  V              D+W        L   S                         +  P  +LPGH ESYNPP EYLL E+EK  L     +P         + P +P  YPNLR+VP     I E+ +R  DL    R  + +V+   ++++ + +P   DL+PFP +         +++  ++    G+++             ++G D  S +R + +      K  ++     S+AW+P  +  L+A  V + V I+NP L      D L      + +  + LS  +  E + K+  +   W+    E     E    L+I+  +++  +SWH  GDY +++       +   +V +H++++  S +PF  +K     A FH  +  P L +A      ++VY+LA + L K L       S + +HP  +++I G+++ ++ WFDLD+   P+K L  ++ +VR++   + YPL A  + +G V+  +  VY+   +NPL+VPV + +  ++ + + +  V F P    ++S G D TIR
Sbjct:    1 QDIRNTVGNIPLEWYEDYPHIGYDLDGQKIIKPIRSKDELDEFLDKMDNPDYWRTVRDKMTGTDVILTDEQVQLIHRL--QRGQLADVNYDPYEPAVDFFTHEKMIHPVTNRPADKRSFIPSLIEKEKVSKLVHAIKMGWIKPRRPRERGPVFF------------DLWATEDPNAVLGRHSMH-----------------------VPAPKMRLPGHAESYNPPPEYLLTEEEK--LAWEQQEPEER------KLPFLPGSYPNLRTVPAYPRFIQERFERCLDLYLCPRQRRLRVNVDPDELIPK-LPKPKDLQPFPTVQSLIYKGHTNLVRCISTDPTGQWL-------------VSGSDDCS-VRFWEVCTARCVKVMEVEGAVKSIAWNPNPSLCLVAFTVNNVVKIVNPMLG-----DKL-----VYGATDLLLSGFESPEEARKQPTV---WVAATAE---EHEHGVRLLIQHPKSVRQLSWHGRGDYLVSV----VPDNGSQQVMLHQVTRRRSQSPFRRSKGLVQAAVFHPLR--PFLLVA--TQRYVRVYNLASQTLAKKLMTNCKWVSSVAVHPGGDNVICGSYDRRLAWFDLDLSTKPYKVLRHHKKAVRAVCFHKRYPLFASASDDGGVIVCHGMVYNDLLQNPLIVPVKVLKGHQVMRDLGVLDVIFHPSQPWVFSAGSDATIR 614
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Yeast
Match: ERB1 (Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1 [Source:SGD;Acc:S000004652])

HSP 1 Score: 258.84 bits (660), Expect = 2.953e-75
Identity = 216/746 (28.95%), Postives = 374/746 (50.13%), Query Frame = 2 
Query:   26 IFSVFTENFNMIQENE----YDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKG-AVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNE----EYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTI---SQDVILSLNVSCCGKYIAVVGYE-YLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCN--LLALAVASKVVIINPGLNSSKDSDDLELKMKEWYS----NSVNLSSLD---------DEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTP--SVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLF--EKLDKAVDMYSVCFDPKSLRLYSGGKDKTIR 2167
            I+S + +  + I + E    YD D SD E  QNTIGN+P+  Y   PHIGYDI+G+ +M+   AKG A+D  +D++E  +  T + D  +G ++ L+ +++ LI  +  +       TD+     E + +WFTR     P++A P  K+ F+PS ++ KRV K++ AI+ GR+  P+   + K  +   ++       D+W  + +  T  HV                      +R    PPP     +EESYNPPEEYLL+ +EK+   +  Y           ER  IP  Y  LR VP     I E+ +R  DL  A RV K+K++     ++ + +PS  DL+PFP  ++ +TI    +  + +L++   G ++A    +  + ++  L G +      +Y  ++ + D+E+       + W+P  N  +LA+AV   + +I P +      ++ + K+++ +      +V  S+L+         D E  S K  +            K+ E+   + I   +T+  +SWH  GDYF+T+     +TS    V IH++SK  + +PF  +K   + A+FH  K  P LF+  C+   +++YDL+Q+ LVK L + G    S +++HP  ++LI  +F+ ++ W DLD+  +P+KTL  +  +VRS+   +  PL +    +G++  F++ VY    KNP++VP+      K+  ++ +    + P+   L+S G D T R
Sbjct:  124 IYSKYADGSDRIIKPEINPVYDSDDSDAE-TQNTIGNIPLSAYDEMPHIGYDINGKRIMR--PAKGSALDQLLDSIELPEGWTGLLDKNSGSSLNLTKEELELISKIQRNE-----QTDDSINPYEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQY-----DLWGDSTE--TNDHV--------------------MHLRAPKLPPPT----NEESYNPPEEYLLSPEEKEAWENTEYSER--------ERNFIPQKYSALRKVPGYGESIRERFERSLDLYLAPRVRKNKLNIDPNSLIPE-LPSPKDLRPFP--IRCSTIYAGHKGKVRTLSIDPSGLWLATGSDDGTVRVWEILTGRE------VYRTTLID-DEENPDYHIECIEWNPDANNGILAVAVGENIHLIVPPIFGYDIENNGKTKIEDGFGYDTFGTVKKSNLEVNENGDGDEDGENESAKNAVKKQVAQWNKPSQKQLEKDICITISCKKTVKKLSWHRKGDYFVTVQPDSGNTS----VLIHQVSKHLTQSPFKKSKGIIMDAKFHPFK--PQLFV--CSQRYVRIYDLSQQILVKKL-LPGARWLSKIDIHPRGDNLIASSFDKRVLWHDLDLASTPYKTLRYHEKAVRSVNFHKKLPLFSSAADDGTIHVFHATVYDDMMKNPMIVPLKKLTGHKVINSLGVLDAIWHPREAWLFSAGADNTAR 803
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Nematostella
Match: EDO39231 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAP6])

HSP 1 Score: 202.601 bits (514), Expect = 4.389e-56
Identity = 190/703 (27.03%), Postives = 317/703 (45.09%), Query Frame = 2 
Query:  101 DIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYD---KKTLKHVSAEYLEWLPKELQPDYQTK-YQSIRQIIRPPPEKLPGHEESYNPPE-EYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQD-VILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKE---DLTIRNPSLAWHPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTL-QVTGTPSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLF--EKLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            D +NT+GN+P+EWY   PHIGYD++G+ +MK       +D F+  ++N D    ++D  T + VVL+D+++ +I  + +++   S     E YV+ +FT   M  PVS  P  K  FIPS  + KRV K++ AI+ G +  P+  + DK            R   +W+   D   ++   H+ A      PK   PD Q + +QS  Q            +    PP  E+ L +                 CR +  +          RS   S    L        L    R     V  + E++L + +P   DL+PFP            ++  + V   G+++A              G D  S+ + + ++     K    D +I++     +PQC+L+A+A+    +++NP L      D L          S     LD         + +  W     E  K+  RL   I++  + I  ++WH+ GDYF T+  +G + S    V IH+LSK  S  PF   K       FH  K  P LF+A      ++VY+L +++L K L       S M +HP  ++LIVG+++ ++CWFD+D+   P+KTL  ++ ++R +   + YPL A  + +G+V+  +  VY+   +NPL+VPV +    K+   + +    F P    +++ G D+ +R F
Sbjct:    1 DARNTVGNIPVEWYNEYPHIGYDLTGKKIMK-PATGDELDDFLSKMDNPDYWRTVRDKATMREVVLTDEELAIIDRIQNAQFPESGFDPYEPYVD-FFTNKKMIHPVSEPPEPKSRFIPSKWEHKRVMKIVRAIRNGWIK-PKKTEGDK-----------PRYYMLWDKADDAPKQRHTMHIPA------PKMKLPDQQRRCWQSACQKFELNQNFANTRQHQPAPPNTEFKLRQH----------------CRAMSRQ---------HRSCWRSLQGAL-------GLRLLFRSHSRNVQINPEELLPK-LPKPKDLQPFPTTEALVYEGHSGMVRCVTVDPTGQWLAT-------------GSDDKSV-KFWEVATGRCTKTVTLDRSIQSIDWNPNPQCSLVAVAMGDSALVVNPCLG-----DKLIC--------SATDEMLDSFSTQGDSRESAVEWGASDAEEYKQGIRL---ILKHIKAISKITWHAKGDYFATLLPQGGNKS----VFIHQLSKRRSQCPFKKAKGLVQQVLFHPSK--PFLFVA--TQKYVRVYNLMKQELTKKLISNVKWISSMAIHPKGDNLIVGSYDRRLCWFDMDLSSKPYKTLRSHKKALRQVAFHKRYPLFASASDDGTVIISHGMVYNDLMQNPLLVPVKILRGHKVTNDLGVLDCVFHPSQPWIFTAGSDQCVRLF 612
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Medaka
Match: bop1 (BOP1 ribosomal biogenesis factor [Source:NCBI gene;Acc:101173075])

HSP 1 Score: 300.056 bits (767), Expect = 5.402e-90
Identity = 228/719 (31.71%), Postives = 365/719 (50.76%), Query Frame = 2 
Query:   41 TENFNMIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRG-FLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDK-EDLTIRNPSLAWHPQ---CNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGT-PSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEK--LDKAVDMYSVCFDPKSLRLYSGGKDKTIRGF 2173
            TE     + +EY+ D+SDEEDI+NT+GN+PMEWYK+ PHIGYD+ G+ + K    K  +D F+D +EN D    + D  TG+++VLSD+ + L+  L   RG F  ++ +  +    +F+ DVM  PV+ RP  K+SFIPS+ ++++VSK+++AIKMG +     +D  K            R  D+W  N D   L    A++   LP                    P  +LPGHEESYNPP EYL  E+EK +   +  DP     R++   P IP  + +LR VP  +  I EK +R  DL    R  K +V+ + E ++ + +P   DL+PFP        +Q ++   + S           ++L      +G D  S +R + +      K   +     S+AW+P    C LLA+AV S V+I++P L      D L +   E       L+   +E PS     +    +  + EG + +E +  L I+  + +  ++WH+ GDY  ++       SS  +V IH+LS+  S  PF  NK       FH  +  P  F+A      +++Y+L ++++ K LQ      S + +HP  +H+I G+++ K+ WFDLD+   P+K L  ++ +VRS+   + YPL A  + +G+V+  +  VY+   +NPL+VPV +     +   + +  V F P    ++S G D T+R F
Sbjct:  108 TEGKQEKKGDEYEHDTSDEEDIRNTVGNIPMEWYKDFPHIGYDLDGKKIFKPIRNKDELDEFLDKMENPDYWRTVHDKQTGRDIVLSDEQVDLVNRL--QRGQFGDINFNEYQPTVEFFSSDVMIHPVTNRPADKRSFIPSLIEKEKVSKLVHAIKMGWIKPRRVQDDSK-----------ERYYDLW-ANEDSSIL----AKHRMHLPA-------------------PKLRLPGHEESYNPPPEYLFTEEEKALWEQQ--DPE---DRKL---PFIPKKFSSLRQVPAYSRFIHEKFERCLDLYLCPRQRKMRVNVNPEDLIPK-LPKPKDLQPFPT-------TQSLVYRGHSSLVRSVSVSPSGQWLA-----SGSDDGS-VRFWEVCSSRCMKIVQVGGAVKSVAWNPNPALC-LLAVAVDSTVLILSPSL-----GDKLVISSSERL-----LAGSQEENPSEGPQPV----VWSETEGEELKEGI-HLKIQHPKAVHQVTWHAKGDYLASV---MPDHSSHLQVFIHQLSRRRSQNPFRKNKGLVQCVAFHPIR--PFFFVA--TQRYVRIYNLVKQEMAKKLQANSKWISNIAVHPGGDHVICGSYDCKLSWFDLDLSTKPYKVLRHHKKAVRSVAFHKGYPLFASASDDGTVIVCHGTVYNDLLQNPLIVPVKVLRGHVITHDLGVLDVTFHPTQPWIFSSGADATVRLF 744
[Close]
BLAST of Ribosome biogenesis protein BOP1 vs. Planmine SMEST
Match: SMESG000057062.1 (SMESG000057062.1)

HSP 1 Score: 1440.25 bits (3727), Expect = 0.000e+0
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 2 
Query:   56 MIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTIXXXXXXXXXXXXVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTPSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGFESNH 2185
            MIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTISGKGKSTSSGGKVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTPSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGFESNH
Sbjct:    1 MIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGAKGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLSLHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIKMGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLEWLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKILISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLAFAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNVSCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNPSLAWHPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLSSLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHSCGDYFLTISGKGKSTSSGGKVQIHRLSKCASLTPFSGNKLTWLTARFHCQKNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTPSVMEMHPTENHLIVGTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSVVCFYSKVYSTFDKNPLVVPVSLFEKLDKAVDMYSVCFDPKSLRLYSGGKDKTIRGFESNH 710
The following BLAST results are available for this feature:
BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
BOP11.229e-8429.99BOP1 ribosomal biogenesis factor [Source:HGNC Symb... [more]
BOP11.229e-8429.99BOP1 ribosomal biogenesis factor [Source:HGNC Symb... [more]
BOP19.863e-3642.04BOP1 ribosomal biogenesis factor [Source:HGNC Symb... [more]
BOP19.863e-3642.04BOP1 ribosomal biogenesis factor [Source:HGNC Symb... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Y48B6A.11.470e-6728.41Ribosome biogenesis protein BOP1 homolog [Source:... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG50331.508e-9130.74gene:FBgn0028744 transcript:FBtr0089550[more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
bop11.412e-8629.48BOP1 ribosomal biogenesis factor [Source:NCBI gene... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Bop11.436e-7428.89block of proliferation 1 [Source:MGI Symbol;Acc:MG... [more]
Nedd13.393e-636.46neural precursor cell expressed, developmentally d... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|B4MYI5|BOP1_DROWI1.803e-9432.12Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
sp|B3MHX6|BOP1_DROAN2.314e-9130.73Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
sp|B4LKS9|BOP1_DROVI2.892e-9130.76Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
sp|B4HN85|BOP1_DROSE3.212e-9130.74Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
sp|B4KQU8|BOP1_DROMO7.899e-9130.98Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2LPQ01.638e-10630.82BOP1NT domain-containing protein OS=Opisthorchis f... [more]
A0A183AI762.633e-10630.71BOP1NT domain-containing protein OS=Echinostoma ca... [more]
C1LGL87.665e-10629.58WD_REPEATS_REGION domain-containing protein OS=Sch... [more]
A0A4Z2DHA48.076e-10629.90Ribosome biogenesis protein BOP1 isoform 2 OS=Schi... [more]
A0A504YCK92.731e-10530.78Ribosome biogenesis protein bop1 OS=Fasciola gigan... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
bop17.553e-5228.11BOP1 ribosomal biogenesis factor [Source:NCBI gene... [more]
ENSAMXT00000013312.21.532e-1553.97pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
bop17.381e-8428.51BOP1 ribosomal biogenesis factor [Source:NCBI gene... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
ERB12.953e-7528.95Constituent of 66S pre-ribosomal particles; forms ... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO392314.389e-5627.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
bop15.402e-9031.71BOP1 ribosomal biogenesis factor [Source:NCBI gene... [more]
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BLAST of Ribosome biogenesis protein BOP1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000057062.10.000e+0100.00SMESG000057062.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30005828 ID=SMED30005828|Name=Ribosome biogenesis protein BOP1|organism=Schmidtea mediterranea sexual|type=transcript|length=2359bp
TTTATTGAAAATTGTTTAAATATTAATATTTTCAGTTTTCACCGAAAATT
TTAACATGATTCAAGAAAATGAGTATGATTTTGATTCATCTGACGAAGAA
GACATTCAAAATACTATTGGTAATGTTCCGATGGAATGGTATAAAAATAC
CCCTCATATTGGATATGATATAAGTGGTAGACCACTCATGAAAATATCTG
GAGCGAAAGGTGCTGTTGATTCATTTATCGACAATGTTGAAAATGTGGAT
AAGACTACAATAATCAAAGATCCATTAACTGGTCAAAACGTTGTTCTGAG
CGACAAAGACATTATGTTAATTAAAGGACTATGTTCGAGCAGAGGATTTT
TATCACTACATACTGATAATGAAGAATATGTTAATAATTGGTTTACTAGA
GATGTTATGGATACACCTGTTTCTGCTCGTCCTCCTCAGAAAAAAAGCTT
TATCCCTTCAATATCTGATAGAAAAAGAGTGAGTAAGATGATTTACGCTA
TTAAAATGGGAAGAATGGCTTTTCCGGAGCCAGAAGATAAGGACAAAGTA
TTAGATAGTGATTATGATTTCATTATGAATACCAGAGTTCCTGACGTTTG
GAATCCTAATTATGATAAAAAAACTCTTAAGCATGTGTCGGCGGAATATT
TGGAGTGGTTACCCAAAGAACTACAGCCTGATTATCAAACAAAATATCAA
AGTATTCGTCAAATCATCAGACCACCACCTGAAAAATTACCGGGTCACGA
GGAATCTTATAACCCTCCAGAAGAATATTTATTAAACGAAAAAGAAAAGA
AGATTTTAATTTCTCGATTTTACGATCCATCATACAATCCATGTCGACAG
ATCGGTGAACGTCCTCTTATTCCGACTGTTTATCCTAATTTACGTTCTGT
TCCATACAGCACAGCTCCGATATTAGAGAAACAGAAACGATTGAGAGATC
TGGCATTTGCAGCCCGTGTAGTGAAGGATAAGGTACACAGTAGTACCGAG
CAGATGCTGAAACAAAACATTCCATCGTATAACGATTTGAAACCGTTCCC
AAATCTCGTACAATTCACAACGATTTCACAGGATGTCATATTGAGCCTCA
ATGTATCCTGCTGTGGCAAGTACATCGCAGTGGTAGGATATGAATATCTC
ACTATTTATCATAACCTAAACGGAGTGGATCCTCTAAGCATCATCAGATT
ATATTCGATTTCAGTGTTTAATCCTGATAAAGAAGATCTTACAATTCGTA
ACCCGTCTTTGGCATGGCATCCTCAATGCAACTTACTAGCTCTCGCAGTG
GCTAGTAAAGTTGTGATAATCAACCCAGGTCTGAATTCATCCAAGGACTC
TGATGATTTGGAGTTGAAAATGAAAGAATGGTATTCAAATTCAGTGAACT
TATCGTCGTTGGATGATGAAGAGCCATCTTCAAAGAAAACTAAATTGTCG
AACAATTGGATATTGATTAAACCCGAAGGAACTAAGCGCCAAGAAAGACT
ATCCAGTTTGATTATTGAATTAGACGAGACAATCCTTGATATGAGTTGGC
ATTCTTGTGGGGATTATTTTTTGACCATTTCTGGCAAAGGAAAATCTACA
TCTAGCGGAGGAAAAGTTCAAATCCATCGTTTAAGTAAATGTGCATCTCT
CACTCCATTTTCTGGCAACAAACTAACCTGGTTAACGGCAAGATTCCATT
GCCAAAAGAATGTGCCATTATTGTTTTTGGCAGAATGCAATACGTCCAAT
ATTCAGGTTTATGATTTGGCACAGAAGAAACTGGTCAAAACTCTTCAAGT
AACCGGCACGCCGAGTGTTATGGAAATGCATCCCACGGAGAATCATCTGA
TTGTCGGAACTTTTGAAGGGAAAATCTGCTGGTTTGATCTCGACATGGGA
ATTTCACCATTCAAAACACTGAACGTTAATCGCAATTCCGTGAGATCAAT
AACGTTGGATAGGAACTATCCATTAATGGCCTGTGGAACAGCAAATGGAT
CCGTTGTCTGCTTCTACTCAAAGGTCTACAGCACATTCGACAAAAACCCA
CTAGTGGTGCCGGTGTCTCTGTTTGAGAAATTAGATAAAGCCGTTGATAT
GTATTCTGTCTGCTTTGACCCAAAAAGCCTCCGGTTGTACAGTGGAGGAA
AAGACAAAACTATTAGAGGCTTCGAATCAAATCACTAAAAATATATTATT
TGTGTTTCCATTTTATAATTTTAAAGTGCAAGAGTAAAATAAACTTATTA
CAAACACAAAATTGTATTTTTAAGATTTGTTTCGAAATTTTGTGATCGAA
ATTTTGTCTTTGAAATCAATTTAGGGTATGTTTCTTGTACATATTTCCTT
AAATTCTAT
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protein sequence of SMED30005828-orf-1

>SMED30005828-orf-1 ID=SMED30005828-orf-1|Name=SMED30005828-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=711bp
MIQENEYDFDSSDEEDIQNTIGNVPMEWYKNTPHIGYDISGRPLMKISGA
KGAVDSFIDNVENVDKTTIIKDPLTGQNVVLSDKDIMLIKGLCSSRGFLS
LHTDNEEYVNNWFTRDVMDTPVSARPPQKKSFIPSISDRKRVSKMIYAIK
MGRMAFPEPEDKDKVLDSDYDFIMNTRVPDVWNPNYDKKTLKHVSAEYLE
WLPKELQPDYQTKYQSIRQIIRPPPEKLPGHEESYNPPEEYLLNEKEKKI
LISRFYDPSYNPCRQIGERPLIPTVYPNLRSVPYSTAPILEKQKRLRDLA
FAARVVKDKVHSSTEQMLKQNIPSYNDLKPFPNLVQFTTISQDVILSLNV
SCCGKYIAVVGYEYLTIYHNLNGVDPLSIIRLYSISVFNPDKEDLTIRNP
SLAWHPQCNLLALAVASKVVIINPGLNSSKDSDDLELKMKEWYSNSVNLS
SLDDEEPSSKKTKLSNNWILIKPEGTKRQERLSSLIIELDETILDMSWHS
CGDYFLTISGKGKSTSSGGKVQIHRLSKCASLTPFSGNKLTWLTARFHCQ
KNVPLLFLAECNTSNIQVYDLAQKKLVKTLQVTGTPSVMEMHPTENHLIV
GTFEGKICWFDLDMGISPFKTLNVNRNSVRSITLDRNYPLMACGTANGSV
VCFYSKVYSTFDKNPLVVPVSLFEKLDKAVDMYSVCFDPKSLRLYSGGKD
KTIRGFESNH*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000014zeta neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR028598BOP1/Erb1
IPR036322WD40_repeat_dom_sf
IPR012953BOP1_N_dom
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
Vocabulary: biological process
TermDefinition
GO:0006364rRNA processing
GO:0022008neurogenesis
GO:0035206regulation of hemocyte proliferation
GO:0040018positive regulation of multicellular organism growth
GO:0042254ribosome biogenesis
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005654nucleoplasm
GO:0005730nucleolus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 669..707
e-value: 5.7
score: 12.2
coord: 573..611
e-value: 3.7
score: 13.4
coord: 615..654
e-value: 6.7
score: 11.8
coord: 333..369
e-value: 400.0
score: 0.6
coord: 482..525
e-value: 220.0
score: 2.2
IPR012953BOP1, N-terminal domainSMARTSM01035BOP1NT_2coord: 29..332
e-value: 1.4E-39
score: 147.5
IPR012953BOP1, N-terminal domainPFAMPF08145BOP1NTcoord: 29..332
e-value: 2.2E-49
score: 168.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 322..708
e-value: 4.0E-61
score: 208.9
IPR028598WD repeat BOP1/Erb1PANTHERPTHR17605RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEINcoord: 5..706
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 338..704