SMED30005820
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005820 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of SMED30005820 vs. TrEMBL
Match: A0A1I8JC43 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.921e-13 Identity = 64/261 (24.52%), Postives = 115/261 (44.06%), Query Frame = 3 Query: 339 GKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQ---CVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNN------------RIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIP---------NCLYLYQLCTQSSACLQRYMEIEKHCS------ICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPI-INCLILMQACLNNTSC 1028 G+ SC+ER C C+ +F+ C F K Q C+ SYE LR++G+ C C+ + + + + +C I+ N CL F N+ + Q + S D+ RK+ P ++ + K + S P NC +YQ C + CLQR++ + + C C++ CL +FY+ D + ++ C C + + C + +F+P C + ++C+ L+++C + SC Sbjct: 397 GRGGSCLERRSRCFDNPTCAADARAFQDRCGFDDISKCPGQRAACLQSYEALRNHGLIPCTCLNYTRAERL---QCDRIRRVYPGNVCLRFFNDAYNIGLLHPKSSKDPQQRIGASSPDDDRKS-PDSEAVVKSSEGASVIHPSAFQLIKSANCFEVYQSCVRHFDCLQRFIALAQACEWMSGAGSCRDRALCLGQLEAFYAYADRFANDAATCGC--PADDSDCQQMSDIFRPRCAYEPPSGTPVDCVQLVESCRASRSC 651
BLAST of SMED30005820 vs. TrEMBL
Match: A0A267FPV5 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008712g2 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.133e-12 Identity = 64/261 (24.52%), Postives = 114/261 (43.68%), Query Frame = 3 Query: 339 GKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQ---CVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNN------------RIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIP---------NCLYLYQLCTQSSACLQRYMEIEKHCSI------CQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCI-KKGQRPIINCLILMQACLNNTSC 1028 G+ SC+ER C C+ +F+ C F K Q C+ SYE LR++G+ C C+ + + + + +C I+ N CL F N+ + Q + S D+ RK+ P ++ + K + S P NC +YQ C + CLQR++ + + C C++ CL +FY+ D + ++ C C + C + +F+P C + ++C+ L+++C + SC Sbjct: 206 GRGGSCLERRSRCFDNPTCAADARAFQDRCGFDDISKCPGQRAACLQSYEALRNHGLIPCTCLNYTRAERL---QCDRIRRVYPGNVCLRFFNDAYNIGLLHPKSSKDPQQRIGASSPDDDRKS-PDSEAVVKSSEGASVIHPSAFQLIKSANCFEVYQSCVRHFDCLQRFIALAQACEWMSGAGSCRDRALCLGQLEAFYAYADRFANDAATCGCPADDSD--CQQMSDIFRPRCAYEPPSGTPVDCVQLVESCRASRSC 460
BLAST of SMED30005820 vs. TrEMBL
Match: A0A267ERK2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008712g1 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 9.101e-12 Identity = 64/261 (24.52%), Postives = 113/261 (43.30%), Query Frame = 3 Query: 339 GKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQ---CVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNN------------RIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIP---------NCLYLYQLCTQSSACLQRYMEIEKHCSI------CQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCI-KKGQRPIINCLILMQACLNNTSC 1028 G+ SC+ER C C+ +F+ C F K Q C+ SYE LR++G+ C C+ + + + + +C I+ N CL F N+ + Q + GS D+ RK+ P ++ + K S P NC +YQ C + CLQR++ + + C C++ CL +FY+ D + ++ C C + C + +F+P C + ++C+ L+++C + C Sbjct: 206 GRGGSCLERRSRCFDNPTCAADARAFQDRCGFDDISKCPGQRAACLQSYEALRNHGLIPCTCLNYTRAERL---QCDRIRRVYPGNVCLRFFNDAYNIGLLHPKSSKDPQQQIGAGSPDDDRKS-PDSEAVVKSSVGASVIHPSAFQLIKSANCFEVYQSCVRHFDCLQRFIALAQACEWMSGAGSCRDRALCLGQLEAFYAYADRFANDAATCGCPADDSD--CQQMSDIFRPRCAYEPPSGTPVDCVQLVESCRASRGC 460
BLAST of SMED30005820 vs. TrEMBL
Match: A0A267H9B6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig031393g1 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.585e-10 Identity = 68/274 (24.82%), Postives = 108/274 (39.42%), Query Frame = 3 Query: 339 GKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGD------QCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTD----------------PGTDNMPKQLQSLSK----------EIPNCLYLYQLCTQSSACLQRYMEIEKHC----SICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRP-IINCLILMQACLNNTSCL*TYGEY 1049 G+ C+ R +C C SF++ C T D D C+ +YE LRH G+ C C+ ++ C ++T N CL + N+ + D PG+ Q + NC +Y+ C + CLQR+ + + C + C NY+ CL +FYS D+ + ++ CQC HS D C +Q + F+P C RP +C+ L + C N+ +CL Y + Sbjct: 183 GRGGDCLGRRATCLESAACRGHAESFRANC-VPTADPARDCQLSRVACLAAYEGLRHSGLIPCTCLNRSDGAAERLQ-CDTVRTFYQGNACLRYFNDAYNNGLVPLRPRQELEGEDTEEPLAPPPPPPPSRAPGSRAPVPQPPPPLSPPLSPAYEPIKPANCFDVYRGCARHYNCLQRFTALREACEWRSNACVNYSFCLTQLEAFYSYADSFAKDAATCQC-HSDDTD-CLQQLEAFRPRCAYDVTRPGGRSCIQLYETCQNSHNCLAKYAHH 452
BLAST of SMED30005820 vs. TrEMBL
Match: A0A059F592 (DDE_Tnp_IS1595 domain-containing protein OS=Anncaliia algerae PRA339 OX=1288291 GN=H312_00426 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.146e-6 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = -2 Query: 1052 CHCEVQLKLCSYGWIGFEWRCLNHKWSHYQTSVLLRQGSFFENIAVSS*KI*KILFYWTSQLNQSEILRFRRI 1270 C+ + LK G EWRC+N++ YQT+ +R+GS+ EN +S+ I KIL YW++ L Q ILRF I Sbjct: 37 CNVVMCLKPTGNKIDGIEWRCMNYRCPKYQTTYSIRKGSWLENFKISAKTIYKILLYWSNGLIQKNILRFVDI 109
BLAST of SMED30005820 vs. Planmine SMEST
Match: SMESG000080577.1 (SMESG000080577.1) HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0 Identity = 254/260 (97.69%), Postives = 257/260 (98.85%), Query Frame = 3 Query: 270 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL*TYGEY 1049 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL ++ + Sbjct: 162 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCLDSFTVF 421 HSP 2 Score: 85.5001 bits (210), Expect = 1.265e-17 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3 Query: 150 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDDDIL 278 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDD + Sbjct: 15 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDDTVF 57
BLAST of SMED30005820 vs. Planmine SMEST
Match: SMESG000080577.1 (SMESG000080577.1) HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0 Identity = 254/260 (97.69%), Postives = 257/260 (98.85%), Query Frame = 3 Query: 270 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL*TYGEY 1049 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL ++ + Sbjct: 138 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCLDSFTVF 397 HSP 2 Score: 66.6254 bits (161), Expect = 1.414e-11 Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 3 Query: 180 MYESCDISQNNCQLDIIIMKKMCGDFLIDDDIL 278 MYESCDISQNNCQLDIIIMKKMCGDFLIDD + Sbjct: 1 MYESCDISQNNCQLDIIIMKKMCGDFLIDDTVF 33
BLAST of SMED30005820 vs. Planmine SMEST
Match: SMESG000080577.1 (SMESG000080577.1) HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 3 Query: 270 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL 1031 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL Sbjct: 162 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL 415 HSP 2 Score: 85.1149 bits (209), Expect = 7.713e-18 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3 Query: 150 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDDDIL 278 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDD + Sbjct: 15 AQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFLIDDTVF 57
BLAST of SMED30005820 vs. Planmine SMEST
Match: SMESG000080577.1 (SMESG000080577.1) HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 3 Query: 270 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL 1031 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL Sbjct: 138 DILIKNSLRVCLGSLGLFAETSFGKNISCIEREKSCHLGQKCSTFWNSFKSFCQFHTCDKTGDQCVVSYEQLRHYGMFDCVCVPFYQHQPMLMKKCLIIQTSLLDNQCLAFLNNRIMYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL 391 HSP 2 Score: 66.6254 bits (161), Expect = 1.020e-11 Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 3 Query: 180 MYESCDISQNNCQLDIIIMKKMCGDFLIDDDIL 278 MYESCDISQNNCQLDIIIMKKMCGDFLIDD + Sbjct: 1 MYESCDISQNNCQLDIIIMKKMCGDFLIDDTVF 33
BLAST of SMED30005820 vs. Planmine SMEST
Match: SMESG000080577.1 (SMESG000080577.1) HSP 1 Score: 287.345 bits (734), Expect = 3.028e-92 Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 3 Query: 618 MYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL*TYGEY 1049 MYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCL ++ + Sbjct: 1 MYQTLTFGSNDNSRKTDPGTDNMPKQLQSLSKEIPNCLYLYQLCTQSSACLQRYMEIEKHCSICQNYTACLEATRSFYSKPDTISLNSIRCQCNHSSFNDPCHRQQQMFQPFCIKKGQRPIINCLILMQACLNNTSCLDSFTVF 144 The following BLAST results are available for this feature:
BLAST of SMED30005820 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30005820 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30005820 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30005820 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30005820 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30005820 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005820 ID=SMED30005820|Name=SMED30005820|organism=Schmidtea mediterranea sexual|type=transcript|length=1271bpback to top protein sequence of SMED30005820-orf-1 >SMED30005820-orf-1 ID=SMED30005820-orf-1|Name=SMED30005820-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=309bp MIVRVILIIIFHQIAQLTSKNCFQMYESCDISQNNCQLDIIIMKKMCGDFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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