Basigin

Overview
NameBasigin
Smed IDSMED30005807
Length (bp)1470
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Basigin (SMED30005807) t-SNE clustered cells

Violin plots show distribution of expression levels for Basigin (SMED30005807) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Basigin (SMED30005807) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Basigin (SMED30005807) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30005807

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30005807SMESG000039120.1 dd_Smed_v4_3356_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30005807SMESG000039120.1 dd_Smed_v4_3356_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30005807SMESG000039120.1 dd_Smed_v4_3356_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30005807SMESG000039120.1 Contig9915uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30005807SMESG000039120.1 Contig9915newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Basigin vs. Ensembl Human
Match: NPTN (neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867])

HSP 1 Score: 57.3806 bits (137), Expect = 1.498e-8
Identity = 52/174 (29.89%), Postives = 81/174 (46.55%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKNQQ 1149
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D      +S N  
Sbjct:   98 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPD--WIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTNNH 267
[Close]
BLAST of Basigin vs. Ensembl Human
Match: NPTN (neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867])

HSP 1 Score: 57.3806 bits (137), Expect = 1.892e-8
Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D+ +
Sbjct:   98 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPD--WIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDE 258
[Close]
BLAST of Basigin vs. Ensembl Human
Match: NPTN (neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867])

HSP 1 Score: 56.6102 bits (135), Expect = 5.790e-8
Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D+ +
Sbjct:  214 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPD--WIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDE 374
[Close]
BLAST of Basigin vs. Ensembl Human
Match: NPTN (neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867])

HSP 1 Score: 56.6102 bits (135), Expect = 5.879e-8
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKN 1143
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D      +S N
Sbjct:  214 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPD--WIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTN 381
[Close]
BLAST of Basigin vs. Ensembl Human
Match: NPTN (neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867])

HSP 1 Score: 55.0694 bits (131), Expect = 1.112e-7
Identity = 36/134 (26.87%), Postives = 59/134 (44.03%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPF 1029
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF
Sbjct:  177 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPH--PDWIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPF 306
[Close]
BLAST of Basigin vs. Ensembl Fly
Match: Bsg (gene:FBgn0261822 transcript:FBtr0079569)

HSP 1 Score: 50.447 bits (119), Expect = 1.250e-6
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1 
Query:  577 ERNGSATTSTLFLT---KLLNDKRYY----------GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGY-PEITEPIVWRFQN---SSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAG----------TMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDN 1116
            ++NG+A T    L    KL+ D+  +          G+Y+C+     G  KE++V   V+     +   V   E + +++ C   G  PE+T    W F N   ++   + I    +  +P  + L +   T  DRG Y C   NA  +NV G          T VRVKG++AALWPF+GI  +V+IL +II++YE R++    E++
Sbjct:   65 KKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE---FDGVSKEIEVIARVVVRVPSNTAVV---EGEKMSVTCSVVGTKPELT----WTFANVTLTNATDRFILKPDDNGVPN-AILTLDNVTLDDRGEYKCIGRNA--ANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEES 258
[Close]
BLAST of Basigin vs. Ensembl Fly
Match: Bsg (gene:FBgn0261822 transcript:FBtr0079573)

HSP 1 Score: 50.447 bits (119), Expect = 1.250e-6
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1 
Query:  577 ERNGSATTSTLFLT---KLLNDKRYY----------GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGY-PEITEPIVWRFQN---SSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAG----------TMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDN 1116
            ++NG+A T    L    KL+ D+  +          G+Y+C+     G  KE++V   V+     +   V   E + +++ C   G  PE+T    W F N   ++   + I    +  +P  + L +   T  DRG Y C   NA  +NV G          T VRVKG++AALWPF+GI  +V+IL +II++YE R++    E++
Sbjct:   65 KKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE---FDGVSKEIEVIARVVVRVPSNTAVV---EGEKMSVTCSVVGTKPELT----WTFANVTLTNATDRFILKPDDNGVPN-AILTLDNVTLDDRGEYKCIGRNA--ANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEES 258
[Close]
BLAST of Basigin vs. Ensembl Fly
Match: Bsg (gene:FBgn0261822 transcript:FBtr0079572)

HSP 1 Score: 50.447 bits (119), Expect = 1.250e-6
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1 
Query:  577 ERNGSATTSTLFLT---KLLNDKRYY----------GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGY-PEITEPIVWRFQN---SSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAG----------TMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDN 1116
            ++NG+A T    L    KL+ D+  +          G+Y+C+     G  KE++V   V+     +   V   E + +++ C   G  PE+T    W F N   ++   + I    +  +P  + L +   T  DRG Y C   NA  +NV G          T VRVKG++AALWPF+GI  +V+IL +II++YE R++    E++
Sbjct:   65 KKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE---FDGVSKEIEVIARVVVRVPSNTAVV---EGEKMSVTCSVVGTKPELT----WTFANVTLTNATDRFILKPDDNGVPN-AILTLDNVTLDDRGEYKCIGRNA--ANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEES 258
[Close]
BLAST of Basigin vs. Ensembl Fly
Match: Bsg (gene:FBgn0261822 transcript:FBtr0079566)

HSP 1 Score: 50.447 bits (119), Expect = 1.250e-6
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1 
Query:  577 ERNGSATTSTLFLT---KLLNDKRYY----------GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGY-PEITEPIVWRFQN---SSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAG----------TMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDN 1116
            ++NG+A T    L    KL+ D+  +          G+Y+C+     G  KE++V   V+     +   V   E + +++ C   G  PE+T    W F N   ++   + I    +  +P  + L +   T  DRG Y C   NA  +NV G          T VRVKG++AALWPF+GI  +V+IL +II++YE R++    E++
Sbjct:   65 KKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE---FDGVSKEIEVIARVVVRVPSNTAVV---EGEKMSVTCSVVGTKPELT----WTFANVTLTNATDRFILKPDDNGVPN-AILTLDNVTLDDRGEYKCIGRNA--ANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEES 258
[Close]
BLAST of Basigin vs. Ensembl Fly
Match: Bsg (gene:FBgn0261822 transcript:FBtr0079567)

HSP 1 Score: 50.447 bits (119), Expect = 1.250e-6
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1 
Query:  577 ERNGSATTSTLFLT---KLLNDKRYY----------GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGY-PEITEPIVWRFQN---SSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAG----------TMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDN 1116
            ++NG+A T    L    KL+ D+  +          G+Y+C+     G  KE++V   V+     +   V   E + +++ C   G  PE+T    W F N   ++   + I    +  +P  + L +   T  DRG Y C   NA  +NV G          T VRVKG++AALWPF+GI  +V+IL +II++YE R++    E++
Sbjct:   65 KKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE---FDGVSKEIEVIARVVVRVPSNTAVV---EGEKMSVTCSVVGTKPELT----WTFANVTLTNATDRFILKPDDNGVPN-AILTLDNVTLDDRGEYKCIGRNA--ANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEES 258
[Close]
BLAST of Basigin vs. Ensembl Zebrafish
Match: nptnb (neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821])

HSP 1 Score: 54.299 bits (129), Expect = 1.978e-7
Identity = 81/292 (27.74%), Postives = 125/292 (42.81%), Query Frame = 1 
Query:  271 ILEIKNISFEDALVYYCDKGGAAYRFFLHV-YAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTK----LLNDKRY--YGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQ---------NSSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            +L I  ++ EDA +Y C       R  +    AIT  R  +  T   +  IN      L+   KSS       +  V   N+T         N  S +   F  +NG   +S+    K     LN  R    GEY C     +       + +   P    H  S    E +  TL C++ GYP    P+  WR +         ++ST R  I  + N     +++L ++ +  + D G Y C+  N +G   + T++RV+   A LWPF+G++ ++IIL VII+VYE RK
Sbjct:   97 VLAISRLTLEDAGIYECRASNDPRRNDMRQNPAITWIRTQATITVLQRPRINASDQEILQ--PKSSKTSQDPPEPIVLKCNLT---------NSHSTHQETFWMKNGQEISSSRTQRKHTEFRLNKPRTDDSGEYMCVYTFKSAPNANASIEVKACPEIIGHKRSENKKEGENATLYCKSAGYPH---PVWTWRKKVGRDSYMDIDNSTGRFFIVNREN-----FTELSILDLDIRTDPGEYFCNASNIIGFTNSSTILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRK 369
[Close]
BLAST of Basigin vs. Ensembl Zebrafish
Match: nptnb (neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821])

HSP 1 Score: 51.6026 bits (122), Expect = 3.428e-7
Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQ---------NSSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            GEY C     +       + +   P    H  S    E +  TL C++ GYP    P+  WR +         ++ST R  I  + N     +++L ++ +  + D G Y C+  N +G   + T++RV+   A LWPF+G++ ++IIL VII+VYE RK
Sbjct:   11 GEYMCVYTFKSAPNANASIEVKACPEIIGHKRSENKKEGENATLYCKSAGYPH---PVWTWRKKVGRDSYMDIDNSTGRFFIVNREN-----FTELSILDLDIRTDPGEYFCNASNIIGFTNSSTILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRK 162
[Close]
BLAST of Basigin vs. Ensembl Zebrafish
Match: ncam2 (neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1])

HSP 1 Score: 51.6026 bits (122), Expect = 1.872e-6
Identity = 66/291 (22.68%), Postives = 117/291 (40.21%), Query Frame = 1 
Query:  151 NESITIHC----SHEGNIAWERRDLSNTNIEKLKTNEK--IKITGNILEIKNISFEDALVYYC----DKGGAAYRFFLHVYA---ITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDER---NGSATTSTLFLTKL-LNDKRYYGEYNCQC-NVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVG 969
             ES+T  C    S E ++ W R+ +      +L+ +E+  ++  G  L ++NI  +D   Y C      G   +  FL V+    ITK RN +A                    + S+A ISC  +         ++W+     +  S+     D R    G    S L +  + L+D   +G ++C+  + + G  K + + I   P F+ + T   + E   + ++C     P  T  ++WR +  +   +G       + PG S L +   +  D G Y C   N +G
Sbjct:  223 GESVTFTCRAYGSPEPDVTWHRKGV------QLQESERYVMRARGTTLTVRNIQQDDGGSYTCRASNKAGEVEHELFLKVFVQPHITKLRNVTA-------------------VEGSAAMISCKAEG---EPLPEISWRRASDGHSFSDGDKSPDGRVEVRGRYGESMLTIVVVKLSD---WGRFDCEALSRIGGHQKSMFLDIEYAPKFQANHTIFFSWEGNPVNISCDVMSNPPAT--MLWRREKLTIPSEGAGNMRVYTAPGRSLLEVTPMSDRDFGRYNCTARNNIG 480
[Close]
BLAST of Basigin vs. Ensembl Zebrafish
Match: ncam2 (neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1])

HSP 1 Score: 51.6026 bits (122), Expect = 1.972e-6
Identity = 66/291 (22.68%), Postives = 117/291 (40.21%), Query Frame = 1 
Query:  151 NESITIHC----SHEGNIAWERRDLSNTNIEKLKTNEK--IKITGNILEIKNISFEDALVYYC----DKGGAAYRFFLHVYA---ITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDER---NGSATTSTLFLTKL-LNDKRYYGEYNCQC-NVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVG 969
             ES+T  C    S E ++ W R+ +      +L+ +E+  ++  G  L ++NI  +D   Y C      G   +  FL V+    ITK RN +A                    + S+A ISC  +         ++W+     +  S+     D R    G    S L +  + L+D   +G ++C+  + + G  K + + I   P F+ + T   + E   + ++C     P  T  ++WR +  +   +G       + PG S L +   +  D G Y C   N +G
Sbjct:  223 GESVTFTCRAYGSPEPDVTWHRKGV------QLQESERYVMRARGTTLTVRNIQQDDGGSYTCRASNKAGEVEHELFLKVFVQPHITKLRNVTA-------------------VEGSAAMISCKAEG---EPLPEISWRRASDGHSFSDGDKSPDGRVEVRGRYGESMLTIVVVKLSD---WGRFDCEALSRIGGHQKSMFLDIEYAPKFQANHTIFFSWEGNPVNISCDVMSNPPAT--MLWRREKLTIPSEGAGNMRVYTAPGRSLLEVTPMSDRDFGRYNCTARNNIG 480
[Close]
BLAST of Basigin vs. Ensembl Zebrafish
Match: ttn.2 (titin, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030113-2])

HSP 1 Score: 51.6026 bits (122), Expect = 2.461e-6
Identity = 64/254 (25.20%), Postives = 105/254 (41.34%), Query Frame = 1 
Query:  250 KIKITGN--ILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTG-AVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVK 1002
            +I + G+  ILE+ NI    A  Y C     A +    V    K         E  H +  +K  ++++    S  + CT     K   + V W      +K  + I+   + N + T S+  L  L +DK   G+Y C+ +   G  + E  V I   P F + +  +  T    + L C+  G PEI   I W F+    +R     K  +   G + L +    ++D G YTC  EN++GS  +   + V+
Sbjct: 6496 EIALRGDTAILELHNIDKSHAGEYTCQIINDAGKENCPVNLFVK---------EAAHFVKKLKNLSVEMG--KSLILECTYAGSPK---ILVKW------HKDGQEIYSSYKYNITTTESSCILECLNSDKEAAGKYTCEVSNDAGHDICEAAVSILEPPFFIESLEPMEVTAGDAVCLKCQIGGTPEIK--ISW-FKADGKVRSSPTCKM-EFFKGIACLKLAKVAKSDIGEYTCKAENSIGSATSSCHLTVQ 6725
[Close]
BLAST of Basigin vs. Ensembl Xenopus
Match: nptn (neuroplastin [Source:NCBI gene;Acc:733721])

HSP 1 Score: 53.1434 bits (126), Expect = 5.365e-7
Identity = 86/302 (28.48%), Postives = 129/302 (42.72%), Query Frame = 1 
Query:  271 ILEIKNISFEDALVYYCDKGGAAYRFFLHV-YAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTW-QGKMFPNKVSEN-IHVFDER-NGSATTSTLFLTKLLNDKRYYGEYNCQCNVLT----GAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQ----------NSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            +L I  ++ ED+  Y C       R  L    A+T  R  +  +  +K  I+  +  T+K  D +   I   C       N+TVT  QG++     ++N + V D R N       L + K   D    GEY C   V T           + +  +P    H  S    E Q   L C+  GYP    P  W +           N+++ R  I  K N +       +I +    D G Y C+  N VGS+   T++RV+   A LWPF+GIV +++ILAV+I+VYE RK      D+ +
Sbjct:  103 VLRITRLTLEDSGTYECRASNDPRRNDLRQNPAMTWIRAQATVSVLLKPKISATEEITIK-KDTTPTPIFLQC-------NLTVTSSQGELESVYWTKNGLEVQDTRKNSPEFVMELKIAKPKADDS--GEYMC---VFTFKNNSPPANATIEVKAVPEISGHKKSENKNEGQEAILYCKCVGYP----PPDWTWYKITDGGLTEVNNASGRIFITNKDNNT----ELRIINLDINNDPGTYLCNASNTVGSDNTTTILRVRSNLAPLWPFLGIVAEIVILAVVIVVYEKRKRPDEVPDDDE 383
[Close]
BLAST of Basigin vs. Ensembl Xenopus
Match: phyh (phytanoyl-CoA 2-hydroxylase [Source:Xenbase;Acc:XB-GENE-943669])

HSP 1 Score: 53.9138 bits (128), Expect = 5.960e-7
Identity = 30/100 (30.00%), Postives = 50/100 (50.00%), Query Frame = 1 
Query:  700 VPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRV 999
            +P    P+F   +  +   E + +TL+C   G P  +  I+W+ ++  +L +G +V       G  QL+IP A Q + G+Y C   NA+GS  +   V V
Sbjct: 1801 IPANFPPVFHIKLKDIVVLEGEPVTLSCLPAGSP--SPQILWK-KDKMSLERGEKVHIKSCPDGRQQLIIPAAGQREAGLYECVAANALGSVASSCTVSV 1897
[Close]
BLAST of Basigin vs. Ensembl Xenopus
Match: ccdc14 (coiled-coil domain containing 14 [Source:Xenbase;Acc:XB-GENE-6449725])

HSP 1 Score: 53.1434 bits (126), Expect = 1.204e-6
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 1 
Query:  433 FTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK--GIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            F + + S      I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F    T       + + LNC A GYP  T  IVW++   + + +   I +     +     L+I    + D G Y C V N VG++V+ +M
Sbjct:  611 FESQRFSIGQRVFIPCVVVSG--DLPITITWQKDGRPIPASLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPTDQDGIYGKAVILNCSAEGYPVPT--IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM 789
[Close]
BLAST of Basigin vs. Ensembl Xenopus
Match: ccdc14 (coiled-coil domain containing 14 [Source:Xenbase;Acc:XB-GENE-6449725])

HSP 1 Score: 52.7582 bits (125), Expect = 1.264e-6
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 1 
Query:  433 FTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK--GIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            F + + S      I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F    T       + + LNC A GYP  T  IVW++   + + +   I +     +     L+I    + D G Y C V N VG++V+ +M
Sbjct:  568 FESQRFSIGQRVFIPCVVVSG--DLPITITWQKDGRPIPASLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPTDQDGIYGKAVILNCSAEGYPVPT--IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM 746
[Close]
BLAST of Basigin vs. Ensembl Xenopus
Match: ccdc14 (coiled-coil domain containing 14 [Source:Xenbase;Acc:XB-GENE-6449725])

HSP 1 Score: 52.7582 bits (125), Expect = 1.311e-6
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 1 
Query:  433 FTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK--GIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            F + + S      I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F    T       + + LNC A GYP  T  IVW++   + + +   I +     +     L+I    + D G Y C V N VG++V+ +M
Sbjct:  603 FESQRFSIGQRVFIPCVVVSG--DLPITITWQKDGRPIPASLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPTDQDGIYGKAVILNCSAEGYPVPT--IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM 781
[Close]
BLAST of Basigin vs. Ensembl Mouse
Match: Nptn (neuroplastin [Source:MGI Symbol;Acc:MGI:108077])

HSP 1 Score: 57.3806 bits (137), Expect = 1.078e-8
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK-----GIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    +     G    +NK    Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK
Sbjct:   97 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WIWRKKENGVFEEISNSSGRFFITNKE--NYTELSIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK 247
[Close]
BLAST of Basigin vs. Ensembl Mouse
Match: Nptn (neuroplastin [Source:MGI Symbol;Acc:MGI:108077])

HSP 1 Score: 57.3806 bits (137), Expect = 1.103e-8
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK-----GIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    +     G    +NK    Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK
Sbjct:   97 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WIWRKKENGVFEEISNSSGRFFITNKE--NYTELSIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK 247
[Close]
BLAST of Basigin vs. Ensembl Mouse
Match: Nptn (neuroplastin [Source:MGI Symbol;Acc:MGI:108077])

HSP 1 Score: 57.3806 bits (137), Expect = 1.128e-8
Identity = 51/174 (29.31%), Postives = 82/174 (47.13%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK-----GIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKNQQ 1149
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    +     G    +NK    Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D      +S N  
Sbjct:   97 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WIWRKKENGVFEEISNSSGRFFITNKE--NYTELSIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTNNH 266
[Close]
BLAST of Basigin vs. Ensembl Mouse
Match: Nptn (neuroplastin [Source:MGI Symbol;Acc:MGI:108077])

HSP 1 Score: 56.6102 bits (135), Expect = 4.035e-8
Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK-----GIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    +     G    +NK    Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D+ +
Sbjct:  213 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WIWRKKENGVFEEISNSSGRFFITNKE--NYTELSIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDE 373
[Close]
BLAST of Basigin vs. Ensembl Mouse
Match: Dscam (DS cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1196281])

HSP 1 Score: 54.6842 bits (130), Expect = 2.786e-7
Identity = 58/209 (27.75%), Postives = 86/209 (41.15%), Query Frame = 1 
Query:  397 TTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSS--------TLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            T +V   I   +F    +  +    I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F            + + LNC A GYP  T  IVW+F   +         L   I+V SN S      L+I    + D G Y C V N VG++V+ +M
Sbjct:  592 TVKVPPFIQPFEFPRFSIGQR--VFIPCVVVSG--DLPITITWQKDGRPIPASLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT--IVWKFSKGAGVPQFQPIALNGRIQVLSNGS------LLIKHVVEEDSGYYLCKVSNDVGADVSKSM 780
[Close]
BLAST of Basigin vs. UniProt/SwissProt
Match: sp|Q9Y639|NPTN_HUMAN (Neuroplastin OS=Homo sapiens OX=9606 GN=NPTN PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 2.781e-7
Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKS-----NKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY+C  + ++       + +   P    H  S    E Q  T+ C++ GYP      +WR + +      +         NK    Y++L ++ +    D G Y C+  NA+GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D+ +
Sbjct:  214 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPD--WIWRKKENGMPMDIVNTSGRFFIINKE--NYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDE 374
[Close]
BLAST of Basigin vs. UniProt/SwissProt
Match: sp|P97300|NPTN_MOUSE (Neuroplastin OS=Mus musculus OX=10090 GN=Nptn PE=1 SV=3)

HSP 1 Score: 56.6102 bits (135), Expect = 2.822e-7
Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRK-----GIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    +     G    +NK    Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D+ +
Sbjct:  213 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WIWRKKENGVFEEISNSSGRFFITNKE--NYTELSIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDE 373
[Close]
BLAST of Basigin vs. UniProt/SwissProt
Match: sp|P97546|NPTN_RAT (Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 6.752e-7
Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNK----SMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKN 1143
            GEY+C  + ++       + +   P    H  S    E Q   + C++ GYP      +WR + +    + I   S +    +   Y++L ++ +    D G Y C+  N++GS    T++RV+   A LWPF+GI+ ++IIL VII+VYE RK      D      +S N
Sbjct:  213 GEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE--WMWRKKENGVFEE-ISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTN 380
[Close]
BLAST of Basigin vs. UniProt/SwissProt
Match: sp|O60469|DSCAM_HUMAN (Down syndrome cell adhesion molecule OS=Homo sapiens OX=9606 GN=DSCAM PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.268e-6
Identity = 58/209 (27.75%), Postives = 86/209 (41.15%), Query Frame = 1 
Query:  397 TTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSS--------TLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            T +V   I   +F    +  +    I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F            + + LNC A GYP  T  IVW+F   +         L   I+V SN S      L+I    + D G Y C V N VG++V+ +M
Sbjct:  592 TVKVPPFIQPFEFPRFSIGQR--VFIPCVVVSG--DLPITITWQKDGRPIPGSLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT--IVWKFSKGAGVPQFQPIALNGRIQVLSNGS------LLIKHVVEEDSGYYLCKVSNDVGADVSKSM 780
[Close]
BLAST of Basigin vs. UniProt/SwissProt
Match: sp|Q9ERC8|DSCAM_MOUSE (Down syndrome cell adhesion molecule homolog OS=Mus musculus OX=10090 GN=Dscam PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.949e-6
Identity = 58/209 (27.75%), Postives = 86/209 (41.15%), Query Frame = 1 
Query:  397 TTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQ--GKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVK-ELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSS--------TLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTM 990
            T +V   I   +F    +  +    I C   SG     +T+TWQ  G+  P  +   I   D       TS+L ++ L     + G Y C       AV+ + ++ + V P F            + + LNC A GYP  T  IVW+F   +         L   I+V SN S      L+I    + D G Y C V N VG++V+ +M
Sbjct:  592 TVKVPPFIQPFEFPRFSIGQR--VFIPCVVVSG--DLPITITWQKDGRPIPASLGVTIDNID------FTSSLRISNL--SLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT--IVWKFSKGAGVPQFQPIALNGRIQVLSNGS------LLIKHVVEEDSGYYLCKVSNDVGADVSKSM 780
[Close]
BLAST of Basigin vs. TrEMBL
Match: A0A4E0R866 (Stromal interaction molecule protein OS=Fasciola hepatica OX=6192 GN=D915_004355 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.849e-19
Identity = 91/332 (27.41%), Postives = 151/332 (45.48%), Query Frame = 1 
Query:  274 LEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISC---TCDSGVKTTNVTVTWQGKMFPNK--VSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFE--DHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIE------------VKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEW-RKSHKTQED--NSKFIYDSKNQQDVVVATKSSDVTDVRQRL 1203
            L I  + F  A  Y C    A+ +  +HVY I K+ + +A  T  +  +  ++F    L+      ++C       G+K T  ++ W+G +F     + E  +  DE NG    S L + +   D   YG+Y CQ NV++G+++  +V I++ P+ +  DHV  V           C    YP IT P+ W       L   ++            V+         ++V       DR VYTC V N +G+      +RVK R++  WP IGIV++VI++ V+I +YE  R++ K +E   N+ F   +K+         + D   +RQR+
Sbjct:  103 LRITKVRFSMAGTYQCSNKLASRQINIHVYGILKAISSAAQLTLKREAVGHLQFNASVLNTTVHPTVACQFRVGRYGIKYT--SIRWKGGLFETHRNLYELTYSADEVNGY-IWSNLTIIRPSADPDLYGKYTCQFNVVSGSIESAEVEISIPPLIKRPDHV--VGHYSGSEFVHTCEVVAYPPITAPVSWTRDEEPILTNAVDEPYVSRIDWSGRVRFETVRVPNDRIVFDPVMPEDRAVYTCFVRNTIGNATGAIFLRVKDRWSVFWPLIGIVLEVIVMIVVIFLYEMKRRAQKKRESEHNADFDATAKSSGIRYDGDAAGDDMLLRQRI 429
[Close]
BLAST of Basigin vs. TrEMBL
Match: A0A504YER7 (Queuosine salvage protein OS=Fasciola gigantica OX=46835 GN=FGIG_02089 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.114e-18
Identity = 89/323 (27.55%), Postives = 147/323 (45.51%), Query Frame = 1 
Query:  274 LEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISC---TCDSGVKTTNVTVTWQGKMFPNK--VSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFE--DHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIE------------VKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEW-RKSHKTQEDNSKFIYDSKNQQDVVVATKSSDV 1182
            L I  + F  A  Y C    A+ +  +HVY I K+ + +A  T  +  +  ++F    L+      ++C       G+K T  ++ W+G +F     + E  +  DE NG    S L + +   D   YG+Y CQ NV++G+++  +V I++ P+ +  DHV  V           C    YP IT P+ W       L   ++            V+         ++V       DR VYTC V N +G+      +RVK R++  WP IGIV++VI++ V+I +YE  R++ K +E        S++  D+    KSS +
Sbjct:   70 LRITKVRFSMAGTYQCSNKLASRQINIHVYGILKAISSAAQLTLKREAVGHLQFNASVLNTTVHPTVACQFRVGRYGIKYT--SIRWKGGLFETHRNLYELTYSADEVNGY-IWSNLTIIRPSADPDLYGKYTCQFNVVSGSIESAEVEISIPPLIKRPDHV--VGHYSGSEFVHTCEVVAYPPITTPVSWTRDEEPILTNAVDEPYVSRIDWSGRVRFESVRVPNDRIVFDPVMPEDRAVYTCFVRNTIGNATGAIFLRVKDRWSVFWPLIGIVLEVIVMIVVIFLYEMKRRAQKKRE--------SEHNADLDATAKSSGI 379
[Close]
BLAST of Basigin vs. TrEMBL
Match: A0A5K4F2R6 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.518e-18
Identity = 116/424 (27.36%), Postives = 190/424 (44.81%), Query Frame = 1 
Query:   43 VTLAFLFIISINASSELMKAT------DSKG--KVFDGLGVVSPNESITIHC---SHEGNIAWERRDLSNTNIEKLKTNEKIKITGN-----ILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNV---TVTWQGKMF---PN--KVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTL------RKGIEVKSNKSMPGYS------QLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEW--RKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQR 1200
            + +  +F + I  SS++   T      D+ G  K  DG+ +V  N  +T+ C   S E  + W      +     L   + I I+        L + N+ F  + VY C  G A+ +  +HVY +    + +    + KH + G  ++    +  SS +    C+  V +  +   TV W+G  +   PN  KV+E+    DE++G    S L L     D+  YG+Y C  N++ G ++  ++ I++ P+   +  SV        T  C    YP ITEPI W  +N   L      R  +   S   +   S      Q+V       DR VY+C V  A G++ A   +RVK R A LWP IGI+++V++L +II++YE   R+  K +E     +  SK         ++S+   +RQR
Sbjct:   10 LVVFLVFTLLIYKSSQIGSVTPEVIVLDTNGNQKELDGVAIVY-NSYVTLICRTVSDEHLLRWLYAPSQDETFTPLNNTDHITISSQKNEEVSLLLINVQFNMSGVYQCTNGLASRQIDVHVYGVLNKISSTVHLMK-KHEVVG-AYSLHINTINSSYHPVIACEFRVGSNGIRYTTVRWRGGKYHVKPNLYKVTES---RDEKSG-IIWSNLTLLHPSYDQELYGKYYCMFNIVPGTMETAELQISIPPLIHKNERSVNLYSGVKYTYFCDIIAYPPITEPISW-MRNDVPLVIQHNGRISVHENSENRIHFESKNVLNDQIVFDTIQSDDRAVYSCFVRGAFGNDTAAFFLRVKDRRAPLWPLIGIILEVVVLFIIILIYEIKRRERAKREEAGENLVTSSKTPNAAYGIDEASENMLLRQR 425
[Close]
BLAST of Basigin vs. TrEMBL
Match: A0A4S2KW24 (Ig-like domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010629 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.328e-17
Identity = 78/302 (25.83%), Postives = 140/302 (46.36%), Query Frame = 1 
Query:  274 LEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVT-VTWQGKMFPN--KVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVW-RFQNSSTL---------------RKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            LE + + F  A +Y C    A+ +  +HVY I  + + S      +  +  + F T  +   +   ++C    G      T V W+G       ++   +   D  NG    S L + +L  D+  YG+Y CQ N+++G+++  +V I V PI +     +     +  +  C+   YP IT P+ W R +   TL               R  +E + N +     +++       DR VY+C V + +G+      +RVK R+A LWP IGIV++V++L ++I++YE R+    ++ N++
Sbjct:  101 LEFRRVQFSMAGIYQCSNNVASRQINVHVYGILNAVSSSVRLISKRELVGQLHFETYVMDTSNPPMVACQFQVGRHGVRYTSVRWKGGKLATHPQLYRIVDTLDNVNGY-VWSNLSIKELTFDQALYGKYICQFNIVSGSMESAEVEIVVPPIIKRPEHGMGYFSERKFSYTCQLVAYPTITGPVTWSRDEQHITLDNQGFARVAGYDWEDRVRLETEENMN----DRIIFNPLRPDDRAVYSCSVRSPLGNATGAFFLRVKDRWAVLWPLIGIVLEVVVLFIVILLYEIRRRALAKQRNTE 397
[Close]
BLAST of Basigin vs. TrEMBL
Match: G7YPW9 (Uncharacterized protein OS=Clonorchis sinensis OX=79923 GN=CLF_106334 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.733e-17
Identity = 77/302 (25.50%), Postives = 139/302 (46.03%), Query Frame = 1 
Query:  274 LEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVT-VTWQGKMFPN--KVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVW-RFQNSSTL---------------RKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            LE + + F  A +Y C    A+ +  +HVY I  + + S      +  +  + F T  +   +   ++C    G      T V W+G       ++   +   D  NG    S L + +L  D+  YG+Y CQ N+++G+++  +V I V PI +     +    ++  +  C    YP IT P+ W R +   TL               R  +E + N +     +++       DR VY+C V + +G+      +RVK R+A  WP IGIV++V++L ++I++YE R+    ++ N++
Sbjct:  101 LEFRRVQFSMAGIYQCSNNVASRQISVHVYGILNAVSSSVRLISKRELVGQLHFETHVMDTSNPPMVACQFQVGRHGVRYTSVRWKGGKLATHPQLYRIVDTLDNVNG-YVWSNLSIRELTFDQALYGKYICQFNIVSGSMESAEVEIVVPPIIKRPEHGMGYFSDRKFSYTCHLVAYPTITGPVSWSRDEQPITLDSQGFARVVGYDWEDRVRLETEENAN----DRIIFNPLRPDDRAVYSCSVRSPLGNATGAFFLRVKDRWAVFWPLIGIVLEVVVLFIVILLYEIRRRALAKQRNTE 397
[Close]
BLAST of Basigin vs. Ensembl Cavefish
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:103043178])

HSP 1 Score: 52.7582 bits (125), Expect = 3.083e-7
Identity = 52/160 (32.50%), Postives = 76/160 (47.50%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQN---------SSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            GEY C             + +   P    H  S    E +   L C++ GYP    PI  WR +N         +ST R  I  K N     YS+L ++ +    D G Y C+  N +G   + +++RV+   A LWPF+G++ ++IIL VII+VYE RK
Sbjct:   97 GEYMCVYTFDMAPNANASIEVKAAPEITGHKRSENKKEGENALLYCKSVGYPH---PIWTWRKKNGQASYIDVDNSTGRIFITNKDN-----YSELNILNLDISTDPGEYVCNATNIIGFKESTSILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRK 248
[Close]
BLAST of Basigin vs. Ensembl Cavefish
Match: cntn3a.2 (contactin-3 [Source:NCBI gene;Acc:103045683])

HSP 1 Score: 53.5286 bits (127), Expect = 4.742e-7
Identity = 74/312 (23.72%), Postives = 120/312 (38.46%), Query Frame = 1 
Query:  148 PNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNIS-FEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKM--------FPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQC--NVLTGAVKELKVPITVL---------PIFEDHVT-SVRTTENQTITLNCRAWG--YPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYA 1014
            P E  T+ C  +G  A + R   N  +  L+ + + +++G  L I+++   +DA +Y C         F  + AI   R               ++F  L    ++ + +S     GV     T T+ G +        +P  V ++    + R  S  T  L++ K+  +    G Y C     +  G V     P+ +          P  E H   +V   +   +TL C A G   PEIT    WR  N       +++K++  +     L IP   Q D G Y C  EN +G N       VKGR +
Sbjct:   45 PEEEATLTCDAKGLPAPQYRWSLNGTLIDLRADPRRRLSGGNLVIRSLDRAQDAGIYQCTA-------FNPLGAILSRRAS-------------LQFAYLNFKTQTRSAVSVREGQGVVLLCGTPTYAGDLSFAWVFNEYPYFVQQD----NRRFVSQETGNLYIAKV--EPSDVGNYTCVVVNRITKGKVLSSPTPLVLRTDGAMGEYEPKIEVHFPDTVPAAKGSVVTLECFALGNPVPEIT----WRRANGVPFPSKVKMKNSNVV-----LEIPSFQQEDAGGYECVAENKMGKNT------VKGRLS 315
[Close]
BLAST of Basigin vs. Ensembl Cavefish
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:103043178])

HSP 1 Score: 51.9878 bits (123), Expect = 8.013e-7
Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQN---------SSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY C             + +   P    H  S    E +   L C++ GYP    PI  WR +N         +ST R  I  K N     YS+L ++ +    D G Y C+  N +G   + +++RV+   A LWPF+G++ ++IIL VII+VYE RK      D+ +
Sbjct:  213 GEYMCVYTFDMAPNANASIEVKAAPEITGHKRSENKKEGENALLYCKSVGYPH---PIWTWRKKNGQASYIDVDNSTGRIFITNKDN-----YSELNILNLDISTDPGEYVCNATNIIGFKESTSILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRKRPDEVPDDDE 374
[Close]
BLAST of Basigin vs. Ensembl Cavefish
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:103043178])

HSP 1 Score: 51.9878 bits (123), Expect = 8.013e-7
Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQN---------SSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY C             + +   P    H  S    E +   L C++ GYP    PI  WR +N         +ST R  I  K N     YS+L ++ +    D G Y C+  N +G   + +++RV+   A LWPF+G++ ++IIL VII+VYE RK      D+ +
Sbjct:  213 GEYMCVYTFDMAPNANASIEVKAAPEITGHKRSENKKEGENALLYCKSVGYPH---PIWTWRKKNGQASYIDVDNSTGRIFITNKDN-----YSELNILNLDISTDPGEYVCNATNIIGFKESTSILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRKRPDEVPDDDE 374
[Close]
BLAST of Basigin vs. Ensembl Cavefish
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:103043178])

HSP 1 Score: 51.9878 bits (123), Expect = 8.800e-7
Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPI-VWRFQN---------SSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSK 1122
            GEY C             + +   P    H  S    E +   L C++ GYP    PI  WR +N         +ST R  I  K N     YS+L ++ +    D G Y C+  N +G   + +++RV+   A LWPF+G++ ++IIL VII+VYE RK      D+ +
Sbjct:  213 GEYMCVYTFDMAPNANASIEVKAAPEITGHKRSENKKEGENALLYCKSVGYPH---PIWTWRKKNGQASYIDVDNSTGRIFITNKDN-----YSELNILNLDISTDPGEYVCNATNIIGFKESTSILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRKRPDEVPDDDE 374
[Close]
BLAST of Basigin vs. Ensembl Medaka
Match: nptna (neuroplastin [Source:NCBI gene;Acc:101170837])

HSP 1 Score: 58.5362 bits (140), Expect = 3.367e-9
Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQ----------NSSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            G Y C             + I  +P+   H  S    E Q   L+C++ GYP      +W +           ++ST R  I  + N     Y++L ++ +   AD GVY C+  N +GSN   +++RV+   A LWP +G++ ++IIL VII+VYE RK
Sbjct:   77 GVYVCVYTFDNAPPANATIEIKSVPVITGHKRSENKNEGQRAVLHCKSLGYPHP----IWTWHKVDNGGFKDIDNSTGRFFINSRDN-----YTELHIVNLDINADPGVYACNATNVIGSNKETSVLRVRSHLAPLWPLLGVLAEIIILIVIIVVYEKRK 227
[Close]
BLAST of Basigin vs. Ensembl Medaka
Match: nptna (neuroplastin [Source:NCBI gene;Acc:101170837])

HSP 1 Score: 58.151 bits (139), Expect = 5.538e-9
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQ----------NSSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            G Y C             + I  +P+   H  S    E Q   L+C++ GYP    PI W +           ++ST R  I  + N     Y++L ++ +   AD GVY C+  N +GSN   +++RV+   A LWP +G++ ++IIL VII+VYE RK
Sbjct:  100 GVYVCVYTFDNAPPANATIEIKSVPVITGHKRSENKNEGQRAVLHCKSLGYPH---PI-WTWHKVDNGGFKDIDNSTGRFFINSRDN-----YTELHIVNLDINADPGVYACNATNVIGSNKETSVLRVRSHLAPLWPLLGVLAEIIILIVIIVVYEKRK 250
[Close]
BLAST of Basigin vs. Ensembl Medaka
Match: nptna (neuroplastin [Source:NCBI gene;Acc:101170837])

HSP 1 Score: 57.3806 bits (137), Expect = 7.573e-9
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQ----------NSSTLRKGIEVKSNKSMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            G Y C             + I  +P+   H  S    E Q   L+C++ GYP    PI W +           ++ST R  I  + N     Y++L ++ +   AD GVY C+  N +GSN   +++RV+   A LWP +G++ ++IIL VII+VYE RK
Sbjct:  100 GVYVCVYTFDNAPPANATIEIKSVPVITGHKRSENKNEGQRAVLHCKSLGYPH---PI-WTWHKVDNGGFKDIDNSTGRFFINSRDN-----YTELHIVNLDINADPGVYACNATNVIGSNKETSVLRVRSHLAPLWPLLGVLAEIIILIVIIVVYEKRK 250
[Close]
BLAST of Basigin vs. Ensembl Medaka
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:101160640])

HSP 1 Score: 57.7658 bits (138), Expect = 1.180e-8
Identity = 80/284 (28.17%), Postives = 122/284 (42.96%), Query Frame = 1 
Query:  271 ILEIKNISFEDALVYYCDKGGAAYRFFLHV-YAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTW---QGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQN-SSTLRKGIEVKSNK----SMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            +L +  ++ ED+  Y C       R  L    AIT  R  +  T   K NIN  +   L L D  S  +   C+        T ++    G+  PN  +E           ATT ++  TK   D    G Y C             + +   P    H  S    E +  TL C++ GYP  T    W +Q     L K I+  + +    +   Y++L ++ +    D G+Y C+  N VG+    T++RV+   A LWPF+G++ ++IIL VII+VYE RK
Sbjct:   95 VLSMTRLTLEDSGTYECRASNDPNRNDLRQNPAITWIRAQATITVLQKPNINASEHIILPL-DSPSKPVVLRCNLTTAHWPHTYSFWMKNGQEIPNTRTEQ---------RATTHSI--TKPRADDS--GMYMCVYTFDMAPNGNATIEVKARPEVISHKRSENKNEGENATLYCKSVGYPHPT----WLWQKVDGALYKDIDNTTGRFFITTRDNYTELNILNLDITTDPGLYQCNATNRVGNTTKETILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRK 360
[Close]
BLAST of Basigin vs. Ensembl Medaka
Match: nptnb (neuroplastin [Source:NCBI gene;Acc:101160640])

HSP 1 Score: 57.7658 bits (138), Expect = 1.180e-8
Identity = 80/284 (28.17%), Postives = 122/284 (42.96%), Query Frame = 1 
Query:  271 ILEIKNISFEDALVYYCDKGGAAYRFFLHV-YAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTW---QGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQN-SSTLRKGIEVKSNK----SMPGYSQL-VIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRK 1092
            +L +  ++ ED+  Y C       R  L    AIT  R  +  T   K NIN  +   L L D  S  +   C+        T ++    G+  PN  +E           ATT ++  TK   D    G Y C             + +   P    H  S    E +  TL C++ GYP  T    W +Q     L K I+  + +    +   Y++L ++ +    D G+Y C+  N VG+    T++RV+   A LWPF+G++ ++IIL VII+VYE RK
Sbjct:   95 VLSMTRLTLEDSGTYECRASNDPNRNDLRQNPAITWIRAQATITVLQKPNINASEHIILPL-DSPSKPVVLRCNLTTAHWPHTYSFWMKNGQEIPNTRTEQ---------RATTHSI--TKPRADDS--GMYMCVYTFDMAPNGNATIEVKARPEVISHKRSENKNEGENATLYCKSVGYPHPT----WLWQKVDGALYKDIDNTTGRFFITTRDNYTELNILNLDITTDPGLYQCNATNRVGNTTKETILRVRSHLAPLWPFLGVLAEIIILVVIIVVYEKRK 360
[Close]
BLAST of Basigin vs. Planmine SMEST
Match: SMESG000039120.1 (SMESG000039120.1)

HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1 
Query:   16 MAYSMFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE 1212
            MAYSMFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFIGIVVQVIILAVIIIVYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE
Sbjct:    1 MAYSMFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFIGIVVQVIILAVIIIVYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE 399
[Close]
BLAST of Basigin vs. Planmine SMEST
Match: SMESG000039120.1 (SMESG000039120.1)

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1 
Query:   28 MFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE 1212
            MFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFIGIVVQVIILAVIIIVYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE
Sbjct:    1 MFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESITIHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVYYCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSSANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFLTKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFIGIVVQVIILAVIIIVYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE 395
[Close]
BLAST of Basigin vs. Planmine SMEST
Match: SMESG000010356.1 (SMESG000010356.1)

HSP 1 Score: 51.2174 bits (121), Expect = 8.275e-7
Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1 
Query:  718 PIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKS-HKTQEDNSKFIYDSKNQQDVVVATKSSDVTD--VRQR 1200
            P  ++   S R+ E   I + C  + +P     +VW    +  +      +SN        +V    ++AD G Y C  +N  G++     +RVK + A LWPFIGIV++VIIL  +II YE +K  +K  E     + ++  +Q ++  TK+S++ +  +R R
Sbjct:  138 PFLQEFQESKRSVEGGRIEVLCTGFSHPFELHDLVWNEFPTRKVNNYRRARSNNVTKFDDVIVWDKLSKADAGYYKCEAKNKYGNDSVIMQLRVKDKLAPLWPFIGIVIEVIILLAVIIFYERKKFINKAAE-----MEENPTRQSLLADTKNSEIDEGGLRHR 296
[Close]
BLAST of Basigin vs. Planmine SMEST
Match: SMESG000010356.1 (SMESG000010356.1)

HSP 1 Score: 50.8322 bits (120), Expect = 8.846e-7
Identity = 53/188 (28.19%), Postives = 89/188 (47.34%), Query Frame = 1 
Query:  646 GEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQTITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPMATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFXXXXXXXXXXXXXXXXYEWRKS-HKTQEDNSKFIYDSKNQQDVVVATKSSDVTD--VRQR 1200
            GEY  +     G+       I   P  ++   S R+ E   I + C  + +P     +VW    +  +      +SN        +V    ++AD G Y C  +N  G++     +RVK + A LWPFIGIV++VIIL  +II YE +K  +K  E     + ++  +Q ++  TK+S++ +  +R R
Sbjct:   74 GEYTLKIIADDGSSINATGNIFSPPFLQEFQESKRSVEGGRIEVLCTGFSHPFELHDLVWNEFPTRKVNNYRRARSNNVTKFDDVIVWDKLSKADAGYYKCEAKNKYGNDSVIMQLRVKDKLAPLWPFIGIVIEVIILLAVIIFYERKKFINKAAE-----MEENPTRQSLLADTKNSEIDEGGLRHR 256
The following BLAST results are available for this feature:
BLAST of Basigin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NPTN1.498e-829.89neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867][more]
NPTN1.892e-830.30neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867][more]
NPTN5.790e-830.30neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867][more]
NPTN5.879e-830.23neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867][more]
NPTN1.112e-726.87neuroplastin [Source:HGNC Symbol;Acc:HGNC:17867][more]
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BLAST of Basigin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Basigin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Bsg1.250e-630.43gene:FBgn0261822 transcript:FBtr0079569[more]
Bsg1.250e-630.43gene:FBgn0261822 transcript:FBtr0079573[more]
Bsg1.250e-630.43gene:FBgn0261822 transcript:FBtr0079572[more]
Bsg1.250e-630.43gene:FBgn0261822 transcript:FBtr0079566[more]
Bsg1.250e-630.43gene:FBgn0261822 transcript:FBtr0079567[more]
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BLAST of Basigin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nptnb1.978e-727.74neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-18... [more]
nptnb3.428e-730.63neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-18... [more]
ncam21.872e-622.68neural cell adhesion molecule 2 [Source:ZFIN;Acc:Z... [more]
ncam21.972e-622.68neural cell adhesion molecule 2 [Source:ZFIN;Acc:Z... [more]
ttn.22.461e-625.20titin, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GEN... [more]
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BLAST of Basigin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nptn5.365e-728.48neuroplastin [Source:NCBI gene;Acc:733721][more]
phyh5.960e-730.00phytanoyl-CoA 2-hydroxylase [Source:Xenbase;Acc:XB... [more]
ccdc141.204e-626.70coiled-coil domain containing 14 [Source:Xenbase;A... [more]
ccdc141.264e-626.70coiled-coil domain containing 14 [Source:Xenbase;A... [more]
ccdc141.311e-626.70coiled-coil domain containing 14 [Source:Xenbase;A... [more]
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BLAST of Basigin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Nptn1.078e-830.97neuroplastin [Source:MGI Symbol;Acc:MGI:108077][more]
Nptn1.103e-830.97neuroplastin [Source:MGI Symbol;Acc:MGI:108077][more]
Nptn1.128e-829.31neuroplastin [Source:MGI Symbol;Acc:MGI:108077][more]
Nptn4.035e-829.70neuroplastin [Source:MGI Symbol;Acc:MGI:108077][more]
Dscam2.786e-727.75DS cell adhesion molecule [Source:MGI Symbol;Acc:M... [more]
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BLAST of Basigin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9Y639|NPTN_HUMAN2.781e-730.30Neuroplastin OS=Homo sapiens OX=9606 GN=NPTN PE=1 ... [more]
sp|P97300|NPTN_MOUSE2.822e-729.70Neuroplastin OS=Mus musculus OX=10090 GN=Nptn PE=1... [more]
sp|P97546|NPTN_RAT6.752e-729.24Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn... [more]
sp|O60469|DSCAM_HUMAN1.268e-627.75Down syndrome cell adhesion molecule OS=Homo sapie... [more]
sp|Q9ERC8|DSCAM_MOUSE1.949e-627.75Down syndrome cell adhesion molecule homolog OS=Mu... [more]
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BLAST of Basigin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0R8661.849e-1927.41Stromal interaction molecule protein OS=Fasciola h... [more]
A0A504YER71.114e-1827.55Queuosine salvage protein OS=Fasciola gigantica OX... [more]
A0A5K4F2R61.518e-1827.36Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
A0A4S2KW241.328e-1725.83Ig-like domain-containing protein OS=Opisthorchis ... [more]
G7YPW96.733e-1725.50Uncharacterized protein OS=Clonorchis sinensis OX=... [more]
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BLAST of Basigin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nptnb3.083e-732.50neuroplastin [Source:NCBI gene;Acc:103043178][more]
cntn3a.24.742e-723.72contactin-3 [Source:NCBI gene;Acc:103045683][more]
nptnb8.013e-731.18neuroplastin [Source:NCBI gene;Acc:103043178][more]
nptnb8.013e-731.18neuroplastin [Source:NCBI gene;Acc:103043178][more]
nptnb8.800e-731.18neuroplastin [Source:NCBI gene;Acc:103043178][more]
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BLAST of Basigin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Basigin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Basigin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Basigin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nptna3.367e-931.25neuroplastin [Source:NCBI gene;Acc:101170837][more]
nptna5.538e-932.50neuroplastin [Source:NCBI gene;Acc:101170837][more]
nptna7.573e-932.50neuroplastin [Source:NCBI gene;Acc:101170837][more]
nptnb1.180e-828.17neuroplastin [Source:NCBI gene;Acc:101160640][more]
nptnb1.180e-828.17neuroplastin [Source:NCBI gene;Acc:101160640][more]
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BLAST of Basigin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000039120.10.000e+0100.00SMESG000039120.1[more]
SMESG000039120.10.000e+0100.00SMESG000039120.1[more]
SMESG000010356.18.275e-729.27SMESG000010356.1[more]
SMESG000010356.18.846e-728.19SMESG000010356.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30005807 ID=SMED30005807|Name=Basigin|organism=Schmidtea mediterranea sexual|type=transcript|length=1470bp
CGGTAGAATTTTAAAATGGCGTATTCGATGTTTATTTTTTCAGTTACTTT
GGCTTTCCTATTTATAATATCAATAAATGCATCATCAGAATTAATGAAGG
CTACTGATTCAAAAGGGAAGGTTTTTGACGGATTAGGAGTAGTTTCACCC
AATGAATCCATAACCATTCATTGTAGCCATGAAGGGAATATAGCTTGGGA
ACGTAGGGATTTAAGTAATACGAACATAGAAAAATTGAAAACAAATGAAA
AAATTAAAATTACTGGCAACATATTGGAAATCAAAAACATAAGTTTTGAA
GATGCGCTAGTCTACTATTGTGATAAGGGTGGTGCTGCTTATAGATTCTT
TCTACATGTTTACGCAATAACAAAATCTAGAAATTGTTCTGCTCCTACGA
CCGAAGTAAAACACAATATAAATGGAATTAAATTTACCACTCTCAAATTA
TCCGATAAATCAAGTGCCAATATCTCTTGCACGTGTGATTCAGGTGTAAA
AACCACAAACGTTACTGTTACGTGGCAAGGAAAAATGTTTCCGAATAAAG
TATCGGAAAATATCCATGTTTTTGACGAACGGAATGGGTCAGCGACAACA
AGCACACTTTTTCTAACGAAATTACTCAACGACAAGCGGTATTATGGTGA
ATATAATTGTCAATGCAATGTTCTTACTGGAGCTGTGAAAGAACTCAAAG
TTCCCATTACAGTGCTTCCTATTTTCGAAGATCACGTCACATCAGTACGC
ACTACTGAAAATCAAACGATAACCTTGAATTGCAGAGCCTGGGGCTATCC
GGAAATCACCGAGCCTATCGTATGGAGATTTCAGAATTCCTCTACATTAA
GAAAGGGAATAGAAGTTAAAAGCAACAAATCAATGCCCGGATACAGCCAA
TTAGTGATTCCCATGGCCACACAGGCTGACAGGGGTGTTTATACGTGCCA
CGTGGAAAACGCTGTCGGATCGAACGTAGCTGGAACTATGGTTCGAGTTA
AAGGTCGTTACGCTGCTCTGTGGCCATTTATAGGCATTGTGGTACAAGTA
ATTATTTTAGCGGTAATTATTATCGTATACGAATGGCGAAAATCTCACAA
AACTCAAGAAGACAATTCAAAATTCATTTATGATTCGAAAAATCAACAAG
ATGTAGTCGTTGCAACAAAAAGCAGTGATGTAACAGATGTTAGACAGAGA
CTGATGAAGGAATAATTGATCTCTTAATGAATCTACTGACATTATTTTTG
AATATTTATCCTCTAGAAGTGCATGATTCTTTTTCACTTATTTACCACTC
TTTTACTCAGTGGTGATTATAATCGTCCTTTTTTAATTAACTTTTATATT
ATTGATCGCATGTATGCTTTGAATATCTTTGAATATTGTAAAAATAATAA
TAATTATTATTATTATATGGTGATATTATTGTCAGATTTCACCTTTCTCT
AGTCATGACAATGAGTTATT
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protein sequence of SMED30005807-orf-1

>SMED30005807-orf-1 ID=SMED30005807-orf-1|Name=SMED30005807-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=400bp
MAYSMFIFSVTLAFLFIISINASSELMKATDSKGKVFDGLGVVSPNESIT
IHCSHEGNIAWERRDLSNTNIEKLKTNEKIKITGNILEIKNISFEDALVY
YCDKGGAAYRFFLHVYAITKSRNCSAPTTEVKHNINGIKFTTLKLSDKSS
ANISCTCDSGVKTTNVTVTWQGKMFPNKVSENIHVFDERNGSATTSTLFL
TKLLNDKRYYGEYNCQCNVLTGAVKELKVPITVLPIFEDHVTSVRTTENQ
TITLNCRAWGYPEITEPIVWRFQNSSTLRKGIEVKSNKSMPGYSQLVIPM
ATQADRGVYTCHVENAVGSNVAGTMVRVKGRYAALWPFIGIVVQVIILAV
IIIVYEWRKSHKTQEDNSKFIYDSKNQQDVVVATKSSDVTDVRQRLMKE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0007411axon guidance
GO:0001934positive regulation of protein phosphorylation
GO:0007155cell adhesion
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007169transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007204positive regulation of cytosolic calcium ion concentration
GO:0007399nervous system development
GO:0008542visual learning
GO:0010976positive regulation of neuron projection development
GO:0018108peptidyl-tyrosine phosphorylation
GO:0045743positive regulation of fibroblast growth factor receptor signaling pathway
GO:0048170positive regulation of long-term neuronal synaptic plasticity
GO:0050804modulation of synaptic transmission
GO:0050808synapse organization
GO:0060291long-term synaptic potentiation
GO:0070374positive regulation of ERK1 and ERK2 cascade
GO:1900273positive regulation of long-term synaptic potentiation
GO:1902683regulation of receptor localization to synapse
GO:1903829positive regulation of cellular protein localization
GO:1904861excitatory synapse assembly
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
Vocabulary: INTERPRO
TermDefinition
IPR043204Basigin-like
IPR036179Ig-like_dom_sf
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0004714transmembrane receptor protein tyrosine kinase activity
GO:0005104fibroblast growth factor receptor binding
GO:0005105type 1 fibroblast growth factor receptor binding
GO:0044325ion channel binding
GO:0050839cell adhesion molecule binding
Vocabulary: cellular component
TermDefinition
GO:0005886plasma membrane
GO:0009986cell surface
GO:0014069postsynaptic density
GO:0016020membrane
GO:0016021integral component of membrane
GO:0030425dendrite
GO:0042734presynaptic membrane
GO:0060077inhibitory synapse
GO:0097060synaptic membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 247..318
e-value: 1.8E-6
score: 37.5
coord: 44..109
e-value: 0.18
score: 14.2
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 140..234
e-value: 65.0
score: 4.4
coord: 38..116
e-value: 0.026
score: 23.7
coord: 241..329
e-value: 6.8E-8
score: 42.2
IPR013783Immunoglobulin-like foldGENE3DG3DSA:2.60.40.10coord: 40..111
e-value: 4.1E-7
score: 31.9
IPR013783Immunoglobulin-like foldGENE3DG3DSA:2.60.40.10coord: 231..332
e-value: 6.5E-15
score: 57.2
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 236..325
e-value: 3.2E-11
score: 43.2
NoneNo IPR availablePANTHERPTHR10075:SF71NEUROPLASTIN Bcoord: 85..381
NoneNo IPR availableCDDcd00096Igcoord: 252..319
e-value: 1.00838E-8
score: 49.548
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.831
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 332..354
IPR043204Basigin-likePANTHERPTHR10075BASIGIN RELATEDcoord: 85..381
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 127..232
score: 8.23
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 235..329
score: 11.243
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILYSSF48726Immunoglobulincoord: 235..330
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILYSSF48726Immunoglobulincoord: 40..116