Actin-related protein 2/3 complex subunit

Overview


Name	Actin-related protein 2/3 complex subunit
Smed ID	SMED30005741
Length (bp)	1387

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Actin-related protein 2/3 complex subunit (SMED30005741) t-SNE clustered cells

Violin plots show distribution of expression levels for Actin-related protein 2/3 complex subunit (SMED30005741) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Actin-related protein 2/3 complex subunit (SMED30005741) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Actin-related protein 2/3 complex subunit (SMED30005741) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30005741

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 17

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
gut	SMED30005741	h1SMcG0006729	Contig3501	GPL15192	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30005741	h1SMcG0006729	Contig3501	GPL15192	PMID:23079596 Forsthoefel et al., 2012
gut	SMED30005741	h1SMcG0006729	Contig1955	GPL15192	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30005741	h1SMcG0006729	Contig1955	GPL15192	PMID:23079596 Forsthoefel et al., 2012
gut	SMED30005741	h1SMcG0021289	Contig3501	GPL15192	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30005741	h1SMcG0021289	Contig3501	GPL15192	PMID:23079596 Forsthoefel et al., 2012
Smed sexual biotype	SMED30005741	h1SMcG0006729	Contig42310	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30005741	h1SMcG0006729	Contig42310	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30005741	h1SMcG0006729	Contig35088	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30005741	h1SMcG0006729	Contig35088	newmark_ests	PMID:29674431 Fincher et al., 2018
gut	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior side	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior muscle cell	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30005741	h1SMcG0006729	dd_Smed_v4_978_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Human
Match: ARPC1A (actin related protein 2/3 complex subunit 1A [Source:HGNC Symbol;Acc:HGNC:703])

HSP 1 Score: 313.538 bits (802), Expect = 3.495e-103
Identity = 163/374 (43.58%), Postives = 238/374 (63.64%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  L+ E    G  GWVH V+FS  G++L W +H S + +A    S Q   V T+  E LP+L++ + +  +V+ AGHDC P    + D   L F + LD  ++ +   ++SA  +F+N+D+ AT E  N+ + + H+N+I ++ I +    + +   T G DG + +WD KTL   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKK---NGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQ---VSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQ-SIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 369

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Human
Match: ARPC1B (actin related protein 2/3 complex subunit 1B [Source:HGNC Symbol;Acc:HGNC:704])

HSP 1 Score: 312.383 bits (799), Expect = 1.293e-102
Identity = 156/379 (41.16%), Postives = 236/379 (62.27%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CLA  D   +   V T+  E LP+L L + T+ +++ AGHDC P  +T       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAD---KKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQ-SSQRGLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 371

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Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CLA  D   +   V T+  E LP+L L + T+ +++ AGHDC P  +T       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAD---KKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQ-SSQRGLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 371

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Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CLA  D   +   V T+  E LP+L L + T+ +++ AGHDC P  +T       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAD---KKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQ-SSQRGLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 371

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Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CLA  D   +   V T+  E LP+L L + T+ +++ AGHDC P  +T       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAD---KKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQ-SSQRGLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 371

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Celegans
Match: arx-3 (Actin-related protein 2/3 complex subunit [Source:UniProtKB/TrEMBL;Acc:Q9U1R7])

HSP 1 Score: 289.271 bits (739), Expect = 3.966e-94
Identity = 159/358 (44.41%), Postives = 215/358 (60.06%), Query Frame = 1

Query:   52 FGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE-SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            FG   I CH++N + T++AVS +SND+ IF   E   G +  +H L EH   V  +DWG K +RIVSCS D+NA+VW     +WKP LV+++ NRAAT+V+WSPLENKFAVGS AKL+SVC ++  ND+W+SK +K+ I ST+TCLDWH +N ++A GS DF  RVF AY+K  D     + WG K+ F  L+ E S G  GWVH VAFS  G +L + +H S++    VD +     V+ +   +LP  T+ W T  +V+ AGHDC P       + LK    LD      ++T  SA   F+NIDR    E  N  + + H+N I +I    G VG     +T G DG + LWDLK
Sbjct:   12 FGIGPITCHAWNKDRTQIAVSASSNDIHIF---EWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWTFDKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKPSPNPWGQKMPFGQLMSEYSVG--GWVHRVAFSPSGCRLAFVSHDSSVSF--VDSTVDSQKVQNLLTIHLPFTTVEWITENSVVTAGHDCSPVLFVVSQDVLKEVCKLDVPSAAKSSTVNSALQLFKNIDRNNAAEKINVALKTLHQNRITQILPHSGTVGNVVKFTTCGTDGIVALWDLK 362

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Celegans
Match: arx-3 (Actin-related protein 2/3 complex subunit [Source:UniProtKB/TrEMBL;Acc:Q9U1R7])

HSP 1 Score: 288.886 bits (738), Expect = 6.894e-94
Identity = 159/358 (44.41%), Postives = 215/358 (60.06%), Query Frame = 1

Query:   52 FGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE-SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            FG   I CH++N + T++AVS +SND+ IF   E   G +  +H L EH   V  +DWG K +RIVSCS D+NA+VW     +WKP LV+++ NRAAT+V+WSPLENKFAVGS AKL+SVC ++  ND+W+SK +K+ I ST+TCLDWH +N ++A GS DF  RVF AY+K  D     + WG K+ F  L+ E S G  GWVH VAFS  G +L + +H S++    VD +     V+ +   +LP  T+ W T  +V+ AGHDC P       + LK    LD      ++T  SA   F+NIDR    E  N  + + H+N I +I    G VG     +T G DG + LWDLK
Sbjct:   12 FGIGPITCHAWNKDRTQIAVSASSNDIHIF---EWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWTFDKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKPSPNPWGQKMPFGQLMSEYSVG--GWVHRVAFSPSGCRLAFVSHDSSVSF--VDSTVDSQKVQNLLTIHLPFTTVEWITENSVVTAGHDCSPVLFVVSQDVLKEVCKLDVPSAAKSSTVNSALQLFKNIDRNNAAEKINVALKTLHQNRITQILPHSGTVGNVVKFTTCGTDGIVALWDLK 362

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Celegans
Match: pfs-2 (Polyadenylation Factor Subunit homolog [Source:UniProtKB/TrEMBL;Acc:U4PN22])

HSP 1 Score: 53.1434 bits (126), Expect = 3.320e-7
Identity = 50/182 (27.47%), Postives = 78/182 (42.86%), Query Frame = 1

Query:  169 FSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQL-----NRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLM 699
            F+F   LQ H + +R++ W   E  ++S   D+  YV     K W+P +    +     + A   + ++P + KFA  S      V  F      +  + + R   + + C+DWHP   +IA GS D    V     KS          GS LA    L E +     V +V F+K+GN L+
Sbjct:  176 FNFETILQAHDSAIRALKWASNEQWLLSA--DQGGYV-----KYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFAR----YTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKS----------GSCLA---TLQEHKSS---VMAVEFNKNGNWLL 330

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Fly
Match: Arpc1 (gene:FBgn0001961 transcript:FBtr0080570)

HSP 1 Score: 272.322 bits (695), Expect = 2.402e-87
Identity = 150/371 (40.43%), Postives = 228/371 (61.46%), Query Frame = 1

Query:   34 MAYIHKFGQ--VSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDK-IWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRL----GWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            MA  + FG    SI CH++N + T++A+S N++++ I+         +     L +H   V  IDW K  +RIVSC+ DRNAYVW + D   WKP LV+L++NRAAT V+WSP ENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+T LDWHP+N ++  GS+D+ VRVF A++K  + P   + WG++     L+ E         GW++SV+FS DGN++ W  H S  C++  D ++   V+R      LP L+  W +  +V+ AG+ C+P     T + +L     LD K +   ++ I+A   FQ++DR    E+ +++++S H+NAI  +R+  G    A  +ST G DGQLV+W+++
Sbjct:    1 MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSRE---GSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAADRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDS--CVSIADATNGNTVIR-CRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGKLVLSGKLD-KSQKKESSGITAMRIFQSMDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNVE 364

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Fly
Match: Arpc1 (gene:FBgn0001961 transcript:FBtr0080569)

HSP 1 Score: 272.322 bits (695), Expect = 2.402e-87
Identity = 150/371 (40.43%), Postives = 228/371 (61.46%), Query Frame = 1

Query:   34 MAYIHKFGQ--VSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDK-IWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRL----GWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            MA  + FG    SI CH++N + T++A+S N++++ I+         +     L +H   V  IDW K  +RIVSC+ DRNAYVW + D   WKP LV+L++NRAAT V+WSP ENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+T LDWHP+N ++  GS+D+ VRVF A++K  + P   + WG++     L+ E         GW++SV+FS DGN++ W  H S  C++  D ++   V+R      LP L+  W +  +V+ AG+ C+P     T + +L     LD K +   ++ I+A   FQ++DR    E+ +++++S H+NAI  +R+  G    A  +ST G DGQLV+W+++
Sbjct:    1 MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSRE---GSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAADRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDS--CVSIADATNGNTVIR-CRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGKLVLSGKLD-KSQKKESSGITAMRIFQSMDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNVE 364

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
Match: arpc1b (actin related protein 2/3 complex, subunit 1B [Source:ZFIN;Acc:ZDB-GENE-030131-7414])

HSP 1 Score: 317.39 bits (812), Expect = 8.460e-105
Identity = 161/376 (42.82%), Postives = 238/376 (63.30%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+         ++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW      WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LISVC F+ +ND+W+ KH+K+ I STI CLDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  +++ES G  GWVH V FS  GN++ W++H S + +A      +  V  ++  E LP+L + + T  +++ AGHDC P     D+N   L FG  LD  ++ +A   ++A+ +FQN+D+ AT ES  +++ S HKN+I++I +L G   +     T G DG + +WD+KTL   + +LKI
Sbjct:    1 MAY-HSFLLEPISCHAWNKDRTQIALCPNNHEVHIY---NKAGNNWNKIHVLKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKPAPTAWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAE---GGKTAVCTSLTSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQ-SAQKGMTARERFQNLDKKATTESKEAVLESLHKNSISQISLLDGGKAKCSKFCTTGMDGGMTIWDVKTLESAMKDLKI 368

[Close]

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+         ++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW      WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LISVC F+ +ND+W+ KH+K+ I STI CLDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  +++ES G  GWVH V FS  GN++ W++H S + +A      +  V  ++  E LP+L + + T  +++ AGHDC P     D+N   L FG  LD  ++ +A   ++A+ +FQN+D+ AT ES  +++ S HKN+I++I +L G   +     T G DG + +WD+KTL   + +LKI
Sbjct:    1 MAY-HSFLLEPISCHAWNKDRTQIALCPNNHEVHIY---NKAGNNWNKIHVLKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKPAPTAWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAE---GGKTAVCTSLTSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQ-SAQKGMTARERFQNLDKKATTESKEAVLESLHKNSISQISLLDGGKAKCSKFCTTGMDGGMTIWDVKTLESAMKDLKI 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
Match: arpc1a (actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1])

HSP 1 Score: 316.235 bits (809), Expect = 2.169e-104
Identity = 164/374 (43.85%), Postives = 237/374 (63.37%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++  +H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E    G  GWVHSV FS  GN+L W +H S + +     S  P  ++T   E L +L++ + +   ++ AGHDC P    F D   L F + LD  ++ +   +ISA  +F+N+D+ AT E  NS + + H+N+I ++ I +G   + +   T G DG + +WD KTL   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKK---SGNQWVKVHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPAPTPWGSKMPFGQVMTEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTISSTPSQLKT---EFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFTSKLDIPKQ-SIQRNISAMERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 369

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
Match: zgc:86896 (zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80])

HSP 1 Score: 310.842 bits (795), Expect = 2.519e-102
Identity = 155/364 (42.58%), Postives = 243/364 (66.76%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLT 1131
            ++ FG   + CH++N + T++A+S NS+DV I+++   GK  +  +H L EH+  +  IDW  + +RIV+C++DRNAYVW   D +WKPTLV++++NRAAT V+WSPLENKFA+GS AKLIS+C F+  ND+W+SKH+K+ INST+  LDWHP+N ++A GS+D H R+F AY+K  +     + WGSK+ F  LL E +   GWVHSV FS  G+ L W +H+SAI +A  D S Q   V  +   +LP+L++++ +   ++ AGHDC PY   +     L+F   +D  ++ ++  ++SA   F+N+D+ AT E  ++ + S H+N+I ++ IL+G+  + +  S++G DG +V+WD K  +
Sbjct:    3 LYSFGLEPLSCHAWNKDRTQIAISPNSSDVHIYQMN--GK-EWIKIHELTEHSGRITGIDWAPESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLISICYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAGSADLHCRIFSAYIKDIEDRPGPTPWGSKMPFGELLLEYKECGGWVHSVCFSPSGDSLAWVSHNSAINVA--DAS-QGKEVTQLTTRHLPLLSVLYVSETEIVAAGHDCCPYQFSYKGPGSLEFVKKVDIPKQ-SSKGNMSAMQHFRNLDKKATTEEEDTGLGSLHQNSITQLCILEGLKAKVEKFSSVGLDGAMVVWDFKVFS 359

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
Match: zgc:86896 (zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80])

HSP 1 Score: 309.686 bits (792), Expect = 5.679e-102
Identity = 155/361 (42.94%), Postives = 242/361 (67.04%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            ++ FG   + CH++N + T++A+S NS+DV I+++   GK  +  +H L EH+  +  IDW  + +RIV+C++DRNAYVW   D +WKPTLV++++NRAAT V+WSPLENKFA+GS AKLIS+C F+  ND+W+SKH+K+ INST+  LDWHP+N ++A GS+D H R+F AY+K  +     + WGSK+ F  LL E +   GWVHSV FS  G+ L W +H+SAI +A  D S Q   V  +   +LP+L++++ +   ++ AGHDC PY   +     L+F   +D  ++ ++  ++SA   F+N+D+ AT E  ++ + S H+N+I ++ IL+G+  + +  S++G DG +V+WD K
Sbjct:    3 LYSFGLEPLSCHAWNKDRTQIAISPNSSDVHIYQMN--GK-EWIKIHELTEHSGRITGIDWAPESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLISICYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAGSADLHCRIFSAYIKDIEDRPGPTPWGSKMPFGELLLEYKECGGWVHSVCFSPSGDSLAWVSHNSAINVA--DAS-QGKEVTQLTTRHLPLLSVLYVSETEIVAAGHDCCPYQFSYKGPGSLEFVKKVDIPKQ-SSKGNMSAMQHFRNLDKKATTEEEDTGLGSLHQNSITQLCILEGLKAKVEKFSSVGLDGAMVVWDFK 356

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Match: parp14.4 (poly (ADP-ribose) polymerase family, member 14, gene 4 [Source:Xenbase;Acc:XB-GENE-5998663])

HSP 1 Score: 317.39 bits (812), Expect = 1.142e-104
Identity = 162/376 (43.09%), Postives = 239/376 (63.56%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A   NS+DV I+K       +++ +H L+EH   V  IDW    +RIV+C TDRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GSSDF  R+F AY+K  +     + WGSK+ F  L++ES    GWVHSV FS  G+++ W +H S IC+A  D   +  V  +I  + LP+L L + T  +++ AGHDC P  Y+       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ ++NN  ++S HKN+I++I +L G   +     T G DG + +WD+K L   + +LKI
Sbjct:    1 MAY-HSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKK---DGDKWTKIHELKEHNGQVTGIDWAPDSNRIVTCGTDRNAYVWTLRNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICIA--DAPKKMRVTTSI-TDTLPLLCLTFITENSLVAAGHDCYPVLYSYVEAQGTLSFGGKLDIPKQ-SSQRGMTARERFQNLDKKASSDTNNVTLDSLHKNSISQISVLSGGKAKCSKFCTTGLDGGMCIWDVKILESAMKDLKI 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Match: slco4a1 (solute carrier organic anion transporter family member 4A1 [Source:Xenbase;Acc:XB-GENE-5905026])

HSP 1 Score: 310.842 bits (795), Expect = 4.064e-102
Identity = 163/372 (43.82%), Postives = 240/372 (64.52%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEG--RLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISEL 1149
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E  G    GWVHSV+FS  GN+L W +H S + +A  D S    V + +  E LP+L++I+ +  +++ AGHDC P    + ++  L F + LD  ++ T   +ISA  +F+N+D+ AT E  N+ + + H+N+I ++ I  G   + +   T G DG + +WD K   +R+S L
Sbjct:    3 LHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKK---SGNQWVKGHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKPASTPWGSKMPFGQMMSEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVA--DASKNMSVSQ-LKTEFLPLLSVIFVSENSLVAAGHDCCPMLFTYDEHGSLTFVSKLDIPKQSTQR-NISAMERFRNMDKRATAEDRNTTLETLHQNSITQVSIYDGDKTDCRKFCTTGIDGAMTIWDFK---ERLSHL 364

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Match: parp14.4 (poly (ADP-ribose) polymerase family, member 14, gene 4 [Source:Xenbase;Acc:XB-GENE-5998663])

HSP 1 Score: 310.842 bits (795), Expect = 6.159e-102
Identity = 159/367 (43.32%), Postives = 234/367 (63.76%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTL 1128
            MAY H F    I CH++N + T++A   NS+DV I+K       +++ +H L+EH   V  IDW    +RIV+C TDRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GSSDF  R+F AY+K  +     + WGSK+ F  L++ES    GWVHSV FS  G+++ W +H S IC+A  D   +  V  +I  + LP+L L + T  +++ AGHDC P  Y+       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ ++NN  ++S HKN+I++I +L G   +     T G DG + +WD+K L
Sbjct:    1 MAY-HSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKK---DGDKWTKIHELKEHNGQVTGIDWAPDSNRIVTCGTDRNAYVWTLRNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICIA--DAPKKMRVTTSI-TDTLPLLCLTFITENSLVAAGHDCYPVLYSYVEAQGTLSFGGKLDIPKQ-SSQRGMTARERFQNLDKKASSDTNNVTLDSLHKNSISQISVLSGGKAKCSKFCTTGLDGGMCIWDVKYL 359

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Match: slco4a1 (solute carrier organic anion transporter family member 4A1 [Source:Xenbase;Acc:XB-GENE-5905026])

HSP 1 Score: 309.686 bits (792), Expect = 1.242e-101
Identity = 160/365 (43.84%), Postives = 236/365 (64.66%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEG--RLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTL 1128
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E  G    GWVHSV+FS  GN+L W +H S + +A  D S    V + +  E LP+L++I+ +  +++ AGHDC P    + ++  L F + LD  ++ T   +ISA  +F+N+D+ AT E  N+ + + H+N+I ++ I  G   + +   T G DG + +WD K +
Sbjct:    3 LHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKK---SGNQWVKGHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKPASTPWGSKMPFGQMMSEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVA--DASKNMSVSQ-LKTEFLPLLSVIFVSENSLVAAGHDCCPMLFTYDEHGSLTFVSKLDIPKQSTQR-NISAMERFRNMDKRATAEDRNTTLETLHQNSITQVSIYDGDKTDCRKFCTTGIDGAMTIWDFKVI 360

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Match: slco4a1 (solute carrier organic anion transporter family member 4A1 [Source:Xenbase;Acc:XB-GENE-5905026])

HSP 1 Score: 309.686 bits (792), Expect = 1.449e-101
Identity = 160/365 (43.84%), Postives = 236/365 (64.66%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEG--RLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTL 1128
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E  G    GWVHSV+FS  GN+L W +H S + +A  D S    V + +  E LP+L++I+ +  +++ AGHDC P    + ++  L F + LD  ++ T   +ISA  +F+N+D+ AT E  N+ + + H+N+I ++ I  G   + +   T G DG + +WD K +
Sbjct:    3 LHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKK---SGNQWVKGHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKPASTPWGSKMPFGQMMSEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVA--DASKNMSVSQ-LKTEFLPLLSVIFVSENSLVAAGHDCCPMLFTYDEHGSLTFVSKLDIPKQSTQR-NISAMERFRNMDKRATAEDRNTTLETLHQNSITQVSIYDGDKTDCRKFCTTGIDGAMTIWDFKVI 360

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Match: Arpc1a (actin related protein 2/3 complex, subunit 1A [Source:MGI Symbol;Acc:MGI:1928896])

HSP 1 Score: 317.39 bits (812), Expect = 8.191e-105
Identity = 165/374 (44.12%), Postives = 239/374 (63.90%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       +++  H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D IWKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  L+ E    G  GWVH V+FS  GN+L W +H S + +A    S Q   +RT   E LP+L++ + +  +V+ AGHDC P    + D   L F + LD  ++ +   ++SA  +F+N+D+ AT E  N+ + + H+N+I ++ I +    + +   T G DG + +WD KTL   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKK---NGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGNRLAWVSHDSTVSVADASKSVQVSTLRT---EFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQ-SIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 369

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Match: Arpc1b (actin related protein 2/3 complex, subunit 1B [Source:MGI Symbol;Acc:MGI:1343142])

HSP 1 Score: 309.301 bits (791), Expect = 1.128e-101
Identity = 155/379 (40.90%), Postives = 234/379 (61.74%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CL   D   +   V T+  E LP+L + + T  +++ AGHDC P     DN    L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDAD---KKMAVATLASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAVTLSFGGRLDVPKQ-SSQRGMTARERFQNLDKKASSEGGAATGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 371

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Match: Arpc1b (actin related protein 2/3 complex, subunit 1B [Source:MGI Symbol;Acc:MGI:1343142])

HSP 1 Score: 307.375 bits (786), Expect = 9.476e-101
Identity = 155/380 (40.79%), Postives = 233/380 (61.32%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPV-VRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXX---XKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N+++V I+   E    +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW    + WKPTLVIL++NRAA  VRW+P ENKFAVGS +++IS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  L++ES    GWVH V FS  G+++ W +H S +CL   D        V T+  E LP+L + + T  +++ AGHDC P     DN    L FG  LD  ++ ++   ++A+ +FQN+D+ A+ E   +      S HKN++++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY---EKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDADKKMALSFSVATLASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAVTLSFGGRLDVPKQ-SSQRGMTARERFQNLDKKASSEGGAATGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKI 375

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Match: Arpc1a (actin related protein 2/3 complex, subunit 1A [Source:MGI Symbol;Acc:MGI:1928896])

HSP 1 Score: 249.98 bits (637), Expect = 5.508e-80
Identity = 122/239 (51.05%), Postives = 164/239 (68.62%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQ 753
            +H+F    I CH++N + T++A+S N+++V I+K       +++  H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D IWKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  L+ E    G  GWVH V+FS  GN+L W +H S + +A    S Q
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKK---NGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGNRLAWVSHDSTVSVADASKSVQ 238

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Match: Arpc1a (actin related protein 2/3 complex, subunit 1A [Source:MGI Symbol;Acc:MGI:1928896])

HSP 1 Score: 160.614 bits (405), Expect = 2.391e-47
Identity = 75/136 (55.15%), Postives = 102/136 (75.00%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISK 450
            +H+F    I CH++N + T++A+S N+++V I+K       +++  H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D IWKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SK
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKK---NGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSK 135

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BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Match: sp|Q8AVT9|AR1AA_XENLA (Actin-related protein 2/3 complex subunit 1A-A OS=Xenopus laevis OX=8355 GN=arpc1a-a PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 3.506e-105
Identity = 168/374 (44.92%), Postives = 241/374 (64.44%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEG--RLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E  G    GWVHSV+FS  GN+L W +H S + +A  D S    V + +  E LP+L++I+ +  ++I AGHDC P    + ++  L F + LD  ++ T   +ISA  +F+N+D+ AT E  N+ + + H+N+I ++ I  G   E +   T G DG + +WD KTL   I  LKI
Sbjct:    3 LHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKK---SGDQWVKGHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKPASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVA--DASKNMSVSQ-LKTEFLPLLSVIFVSENSLIAAGHDCCPMLFTYDEHGSLTFVSKLDIPKQSTQR-NISAMERFRNMDKRATTEDRNTTLETLHQNSITQVSIYDGDKTECRKFCTTGIDGAMTIWDFKTLESYIQGLKI 369

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Match: sp|A0A1L8EXB5|AR1AB_XENLA (Actin-related protein 2/3 complex subunit 1A-B OS=Xenopus laevis OX=8355 GN=arpc1a-b PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.248e-105
Identity = 169/375 (45.07%), Postives = 243/375 (64.80%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEG--RLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E  G    GWVHSV+FS  GN+L W +H S + +A  D S    V + +  E LP+L++I+ +  ++I AGHDC P  +FT + Q  L F + LD  ++ T   +ISA  +F+N+D+ AT E  N+ + + H+N+I ++ I  G   + +   T G DG + +WD KTL   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNKDLTQIAISPNNHEVHIYKN---SGNQWVKCHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKPASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVA--DASKNMSVSQ-LKTEFLPLLSVIFVSENSLIAAGHDCCPM-LFTYDEQGSLTFVSKLDIPKQSTQR-NISAMERFRNMDKRATTEDRNTTLETLHQNSITQVSIYDGDKTDCRKFCTTGIDGAMTIWDFKTLESYIQGLRI 369

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Match: sp|Q9R0Q6|ARC1A_MOUSE (Actin-related protein 2/3 complex subunit 1A OS=Mus musculus OX=10090 GN=Arpc1a PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.729e-104
Identity = 165/374 (44.12%), Postives = 239/374 (63.90%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       +++  H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D IWKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  L+ E    G  GWVH V+FS  GN+L W +H S + +A    S Q   +RT   E LP+L++ + +  +V+ AGHDC P    + D   L F + LD  ++ +   ++SA  +F+N+D+ AT E  N+ + + H+N+I ++ I +    + +   T G DG + +WD KTL   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKK---NGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGNRLAWVSHDSTVSVADASKSVQVSTLRT---EFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQ-SIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 369

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Match: sp|Q6GNU1|AR1BB_XENLA (Actin-related protein 2/3 complex subunit 1B-B OS=Xenopus laevis OX=8355 GN=arpc1b-b PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.291e-103
Identity = 161/376 (42.82%), Postives = 242/376 (64.36%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MA+ H F    I CH++N + T++A   NS+DV I+K   V   +++ +H L+EH   V  IDW  + +RIV+C TDRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GSSDF  R+F +Y+K  +     + WGSK+ F  L++ES    GWVHSV FS  G+++ W +H S IC+A  D + +  V   I  + LP+L + + T  +++ AGHDC P  YT       L FG  LD  ++ ++   ++A+ +FQN+D+ A+ ++NN  ++S HKN+I++I +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAF-HSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKKDGV---KWTKIHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLRNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSSYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHSVCFSNSGDRMAWVSHDSTICIA--DATKKMRVTSLI-TDTLPLLCVTFITENSLVAAGHDCYPVLYTYDEAQGTLSFGGKLDVPKQ-SSQRGMTARERFQNLDKKASSDTNNITLDSLHKNSISQISVLSGGKAKCSKFCTTGLDGGMCIWDVKSLESALKDLKI 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Match: sp|Q7ZXD5|AR1BA_XENLA (Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc1b-a PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.552e-103
Identity = 161/376 (42.82%), Postives = 241/376 (64.10%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A   NS+DV I+K       ++S +H L+EH   V  IDW  + +RIV+C TDRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I ST+  LDWHP+N ++A GSSDF  R+F AY+K  +     + WGSK+ F  L++ES    GWVHSV FS  G+++ W +H S IC++  D + +  V   I  + LP+L + + T  +++ AGHDC P     D  Q  L FG  LD  ++ ++   ++A+ +FQN+D+ A+ ++NN  ++S HKN+I+++ +L G   +     T G DG + +WD+K+L   + +LKI
Sbjct:    1 MAY-HSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKK---DGDKWSKIHELKEHNGHVTGIDWAPESNRIVTCGTDRNAYVWTLKNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICIS--DATKKMRVTSLI-TDTLPLLCVTFITENSLVAAGHDCFPVLYIYDEAQGTLSFGGKLDIPKQ-SSQRGMTARERFQNLDKKASSDTNNITLDSLHKNSISQLSVLSGGKAKCSKFCTTGLDGGMCIWDVKSLESAMKDLKI 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Match: A0A564Y9D0 (Actin-related protein 2/3 complex subunit OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS4312 PE=3 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.027e-118
Identity = 178/379 (46.97%), Postives = 260/379 (68.60%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARS-DKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWES-EGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ---LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MA  +  G  +++CH+FN + T MA+S+N+N+V+I  VP+    +F  +  L+EHTA V  +DW    ++IVSCS DRNAYVW ++ +  WKPTLV LQLNRAA  V+WSP  +KFAVGS +K++S+C F+   D+W+SKH+K+N+ STITC+DWHP+N +IACGS+D+ VRVF A +K  D+   +S WG K  F SLL+E+  G   W+HSV FS DGN+L W  H  ++ +A     + PPVV+TI ++ LP+L++IW    T++GAGHDC P  +F  N     +  G  +D K E    + +SA  KFQ+IDR+AT ++ ++ +++ H+N+INE+ ILKG   +A  +++IGRDGQLV+WDL +L  +I+ L I
Sbjct:    1 MAKSYWIGNDALVCHAFNKDATLMAISINTNNVYILSVPQTSGDKFKLVDTLKEHTALVMGLDWCSASNQIVSCSADRNAYVWKQTPEGKWKPTLVALQLNRAALCVQWSPKGDKFAVGSGSKVVSICFFEQEQDWWVSKHIKKNLKSTITCVDWHPNNTLIACGSTDYRVRVFSAVIKEIDSEGSDSVWGPKSPFQSLLFEAYAGHGTWIHSVRFSSDGNKLAWVGHDCSVSIADASAGN-PPVVQTIRIQCLPLLSVIWVAPNTILGAGHDCCPI-LFNYNGPTGGISAGTMIDLKNENQGESKLSAMRKFQHIDRMATTDTTDARLSTIHQNSINELAILKGNRSKAVQVTSIGRDGQLVIWDLVSLPSQIAGLSI 377

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Match: A0A0R3UKM4 (Actin-related protein 2/3 complex subunit OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS8155 PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.417e-117
Identity = 175/378 (46.30%), Postives = 258/378 (68.25%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARS-DKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWES-EGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MA  +  G  +++CH+FN + + MAVS+N+N+V+I  VP     RF  +  L+EH+A V  IDW    ++IVSCS DRNAYVW ++ +  WKPTLV LQLNRAA  VRWSPL NKFAVGS +K++SVC F+   D+W+SKH+K+ + ST+TC+DWHP+NN++ACGS+D+ VRVF A +K  D+   +S WG K  F +LL+E+  G   W+HS+ FS DGN+L W+ H  ++ +A       PPVV+TI  + LP+ + +W    +V+ AGHDC P     +  Q  +  G S+D K E  A +++SA  KFQ+IDR+AT ++  + +++ H+N+INE+ IL+G   +A  +S+IGRDGQLV+W++ +L+ +I+ L I
Sbjct:    1 MAKAYWIGNDALVCHAFNKDASLMAVSINTNNVYILSVPRSSGERFKLVDTLKEHSALVMGIDWSPTTNQIVSCSADRNAYVWKQTREGKWKPTLVALQLNRAAVCVRWSPLGNKFAVGSGSKVVSVCFFEQEQDWWVSKHIKKGLKSTVTCVDWHPNNNILACGSTDYRVRVFSAVIKEVDSEGADSIWGPKSPFQTLLFEAYNGHGSWIHSICFSADGNKLAWTGHDCSLSIADASNG-SPPVVQTIRHQFLPLTSCMWIAPSSVLAAGHDCCPILFKYNGPQGGISEGKSIDIKNESQAESTLSAMRKFQHIDRMATTDTTGARLSTIHQNSINELCILEGNRSKASQVSSIGRDGQLVVWNMVSLSSQIAGLTI 377

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Match: A0A0R3WHW9 (Actin-related protein 2/3 complex subunit OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS159 PE=3 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.695e-117
Identity = 171/378 (45.24%), Postives = 257/378 (67.99%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARS-DKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWES-EGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIP--YTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MA     G  +++CH+FN + + MA+S+N+++V+I  VP+    RF  +  L+EH+A V  IDW    ++IVSCS DRNAYVW +S D  WKPTLV LQ+NRAA  V+WSPL NKFAVGS ++++SVC F+   D+W+ K +K+ + STITC+DWHP+N ++ACGS+D+HVRVF A++K  D+  ++S WG+K  F +LL+E+  G   W+HSV FS DGN+L W+ H+ ++ +A   G+ +PPVVRTI  + LP+L+ +W    +V+GAGHDC P  +  +     +  G   + K E      +SA  +FQNIDR+AT ++ ++ + + H+N+INE+ I+KG   +   +++IGRDGQLV+WD+ +L   I+ L I
Sbjct:    1 MANPFWIGNDALVCHAFNKDASLMAISINTSNVYILSVPKSPSDRFKLVDTLKEHSALVMGIDWCASSNQIVSCSADRNAYVWKQSSDGKWKPTLVALQINRAALCVKWSPLGNKFAVGSGSRIVSVCFFEKEQDWWVPKQIKKVMKSTITCVDWHPNNTILACGSADYHVRVFSAFIKETDSEDRDSAWGAKSPFQTLLFEAYNGHGSWIHSVCFSADGNKLAWTGHNCSLSIADA-GAGKPPVVRTISTQYLPLLSCVWVGQNSVLGAGHDCCPILFNYYGSEKGISEGKMFNVKSESQDAPKVSALRRFQNIDRMATTDNTDTRLTTIHQNSINELCIMKGDRSKTIQVTSIGRDGQLVIWDMVSLPSLIAGLTI 377

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Match: A0A0R3SV99 (Actin-related protein 2/3 complex subunit OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS9486 PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 3.151e-114
Identity = 175/379 (46.17%), Postives = 257/379 (67.81%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARS-DKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWES-EGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ---LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MA  +  G  +++CH+FN + T MA+S+N+N+V+I  VP+    +F  +  L+EHTA V  +DW    ++IVSCS DRNAYVW ++ +  WKPTL    LNRAA  V+WSP  +KFAVGS +K++S+C F+   D+W+SKH+K+N+ STITC+DWHP+N +IACGS+D+ VRVF A +K  D+   +S WG K  F SLL+E+  G   W+HSV FS DGN+L W  H  ++ +A     + PPVV+TI ++ LP+L++IW    T++GAGHDC P  +F  N     +  G  +D K E    + +SA  KFQ+IDR+AT ++ ++ +++ H+N+INE+ ILKG   +A  +++IGRDGQLV+WDL +L  +I+ L I
Sbjct:    1 MAKSYWIGNDALVCHAFNKDATLMAISINTNNVYILSVPQTSGDKFKLVDTLKEHTALVMGLDWCSASNQIVSCSADRNAYVWKQTPEGKWKPTL----LNRAALCVQWSPKGDKFAVGSGSKVVSICFFEQEQDWWVSKHIKKNLKSTITCVDWHPNNTLIACGSTDYRVRVFSAVIKEIDSEGSDSVWGPKSPFQSLLFEAYAGHGTWIHSVRFSSDGNKLAWVGHDCSVSIADASAGN-PPVVQTIRIQCLPLLSVIWVAPNTILGAGHDCCPI-LFNYNGPTGGISAGTMIDLKNENQGESKLSAMRKFQHIDRMATTDTTDARLSTIHQNSINELAILKGNRSKAVQVTSIGRDGQLVIWDLVSLPSQIAGLSI 373

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Match: H2KSG4 (Actin-related protein 2/3 complex subunit OS=Clonorchis sinensis OX=79923 GN=CLF_109242 PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 3.841e-114
Identity = 179/385 (46.49%), Postives = 253/385 (65.71%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWAR-SDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLL---WESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQ-------PPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            M   H  G  S++ H+FNG+ + +AVSVN++DV++  VP+    ++  +  L+EHTA V  IDW  K +RIVSCS DRNAYVW + SD  WKPTLV+L ++RA+  VRWSPLE+ FAVGS  KL++VCSFD   D+W+SKH+K+N  ST+TCLDWHP+N V+ACGSSDFH+RV+ A LKS D+   +S WGS  +  SLL   +E EG  GWV   +FS DGN+L+W+ H+S + +A V  +         P VV     E LP ++ +W    T + AG+DC PY      + ++F   LD +++   +  ++A  KFQ+IDR+AT ++ +S + + H+N INE+RI  G    A  +S+IGRDG LV WDL +L ++IS+L I
Sbjct:    1 MTSAHAIGNDSLVSHAFNGDGSLLAVSVNTSDVYLLHVPKSPGNKWQIVDVLKEHTALVTGIDWAPKSNRIVSCSADRNAYVWTKQSDGKWKPTLVVLMIDRASICVRWSPLEDSFAVGSGCKLVAVCSFDQELDWWVSKHIKKNFKSTVTCLDWHPNNAVLACGSSDFHMRVYSARLKSGDS---QSAWGSHSSLGSLLFDHYECEG--GWVLGASFSADGNKLVWTKHNSLVFVADVSDTSSSRGAKCGPAVVTCYRSEFLPFISCLWVGPSTFLCAGYDCCPYAFRYSADGVQFVHQLDVRDQSRVSEKLTAMKKFQDIDRMATTDNTSSRLATVHQNCINELRIYSGDRKMASRVSSIGRDGYLVFWDLPSLCKQISQLSI 380

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Match: arpc1b (actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:103027911])

HSP 1 Score: 318.546 bits (815), Expect = 2.428e-105
Identity = 158/376 (42.02%), Postives = 238/376 (63.30%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N++DV I+K        ++  H L+EH   V  IDW  + +RIV+C TDRNAYVW     +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LISVC F+  ND+W+ KH+K+ I STI CLDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  +++ES G  GWVH V FS  GN++ W++H S + +A      +  VV ++  E LP+L + + T  +++ AGHDC P     D  +  + FG  LD  ++ +A   ++A+ +FQN+D+ AT ++  +++ S HKN+I++I +L G   +     T G DG + +WD+K++   + +LKI
Sbjct:    1 MAY-HSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKK---AGNSWTKTHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKPAPTPWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAE---GGKSAVVTSLTSETLPLLCVTFITENSLVAAGHDCYPALFVYDAGKGAITFGGKLDVPKQ-SAQKGMTARERFQNLDKKATSDTKEAVLESLHKNSISQISLLDGGKAKCTKFCTTGMDGGMAIWDVKSIESAMKDLKI 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Match: arpc1b (actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:103027911])

HSP 1 Score: 318.546 bits (815), Expect = 5.768e-105
Identity = 158/376 (42.02%), Postives = 237/376 (63.03%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            MAY H F    I CH++N + T++A+  N++DV I+K        ++  H L+EH   V  IDW  + +RIV+C TDRNAYVW     +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LISVC F+  ND+W+ KH+K+ I STI CLDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  +++ES G  GWVH V FS  GN++ W++H S + +A      +  VV ++  E LP+L + + T  +++ AGHDC P     D  +  + FG  LD  ++ +A   ++A+ +FQN+D+ AT ++  +++ S HKN+I++I +L G   +     T G DG + +WD+K L   + EL++
Sbjct:    1 MAY-HSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKK---AGNSWTKTHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKPAPTPWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAE---GGKSAVVTSLTSETLPLLCVTFITENSLVAAGHDCYPALFVYDAGKGAITFGGKLDVPKQ-SAQKGMTARERFQNLDKKATSDTKEAVLESLHKNSISQISLLDGGKAKCTKFCTTGMDGGMAIWDVKPLESSVGELRL 368

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Match: arpc1a (actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1])

HSP 1 Score: 317.005 bits (811), Expect = 1.461e-103
Identity = 164/374 (43.85%), Postives = 236/374 (63.10%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ D +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGSK+ F  ++ E    G  GWVHSV FS  GN+L W +H S + +     S  P  ++T   E L +L++ + +   ++ AGHDC P    F D   L F + LD  ++ +   +ISA  +F+N+D+ AT E  NS + + H+N+I ++ I +G   + +   T G DG + +WD KTL   I  L+I
Sbjct:   95 LHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKK---SGNQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPAPTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTKSSTPSPLKT---EFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFISKLDIPKQ-SIQRNISAMERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 461

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Match: zgc:86896 (actin-related protein 2/3 complex subunit 1A-like [Source:NCBI gene;Acc:103021341])

HSP 1 Score: 311.612 bits (797), Expect = 7.895e-103
Identity = 155/362 (42.82%), Postives = 241/362 (66.57%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGR-FSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            ++ FG   + CH++N + T++AVS NS+ V I++     KG+ +S +H L+EH+  +  IDW  + +RIV+C++DRNAYVW   D +WKPTLV++++NRAAT V+WSP ENKFA+GS AKLISVC F+  ND+W+SKH+K+ I ST+  LDWHP+N ++A GS+D H RVF AY+K  +     ++WG+K+ F  +L E +   GWVHSVAFS  G+ L W +H+SAI +A    + Q   V  +  E LP+L++++     ++ AGHDC PY   +    +L F   L   ++ T+  S+SA   F+N+D+ AT +  ++ +N+ H+N+I ++ +++G   + +  S++G DG LVLWD+K
Sbjct:    3 LYSFGLEPLSCHAWNKDRTQIAVSPNSSTVIIYQ----KKGKEWSKIHELKEHSGRITGIDWAPESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPQENKFALGSGAKLISVCYFEKENDWWLSKHIKKGICSTVLSLDWHPNNILLAAGSADLHCRVFSAYIKEIEDKPGPTSWGAKMPFGEVLLEQKDVGGWVHSVAFSPSGDSLAWVSHNSAISVAD---AAQGKEVTQLTTEYLPLLSVLYVNETEIVAAGHDCCPYQFSYMGPGKLDFVKKLGISKQ-TSKNSMSAMQHFRNLDKKATTDEEDNELNTLHQNSITQLCVVEGQKAKVEKFSSVGLDGALVLWDVK 356

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Match: arpc1b (actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:103027911])

HSP 1 Score: 310.842 bits (795), Expect = 8.068e-102
Identity = 156/365 (42.74%), Postives = 231/365 (63.29%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            MAY H F    I CH++N + T++A+  N++DV I+K        ++  H L+EH   V  IDW  + +RIV+C TDRNAYVW     +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LISVC F+  ND+W+ KH+K+ I STI CLDWHP+N ++A GS DF  R+F AY+K  +     + WGSK+ F  +++ES G  GWVH V FS  GN++ W++H S + +A    S    VV ++  E LP+L + + T  +++ AGHDC P     D  +  + FG  LD  ++ +A   ++A+ +FQN+D+ AT ++  +++ S HKN+I++I +L G   +     T G DG + +WD+K
Sbjct:    1 MAY-HSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKK---AGNSWTKTHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKPAPTPWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKS---AVVTSLTSETLPLLCVTFITENSLVAAGHDCYPALFVYDAGKGAITFGGKLDVPKQ-SAQKGMTARERFQNLDKKATSDTKEAVLESLHKNSISQISLLDGGKAKCTKFCTTGMDGGMAIWDVK 357

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005938.1 (pep scaffold:Pmarinus_7.0:GL476493:396482:410070:1 gene:ENSPMAG00000005330.1 transcript:ENSPMAT00000005938.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 296.59 bits (758), Expect = 2.320e-97
Identity = 149/373 (39.95%), Postives = 236/373 (63.27%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYT-IFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKIY 1158
            ++ F    I CH++N + T++A+S N+++V I+   +    ++S +H L+EH   +  IDW  + +RIV+C +DRNAYVW   + +WKPTLVIL++NRAAT V+WSP ENKFAVGS A+LISVC F+  ND+W+SKH+K+ I ST+  LDWHP+N ++  GS DF  RV+ +Y+K  +     + WG K+ F S++ E  G  GWVH V FS  GN++ W +H S I +A    + +   ++T   E LP+L++I+ T  +++ AGHDC P   +  D   L F + LD  ++ +   ++SA  +F+N+D+ A+ E  ++ +++ H+N+I ++ + +G         T G DG L +WDLK+L   +  L+IY
Sbjct:   10 LYNFLLEPITCHAWNSDRTQIAISPNNHEVHIY---QRNGSQWSKVHELKEHNGHITGIDWASRSNRIVTCGSDRNAYVWTLKEGVWKPTLVILRINRAATCVKWSPRENKFAVGSGARLISVCYFEQENDWWVSKHIKKPIRSTVLSLDWHPNNVLLVAGSCDFKCRVYSSYIKEVEEKPSPTPWGIKMPFGSMMAEFGGGGGWVHGVCFSGSGNKVAWVSHDSTISIADATRNMESSHLKT---EFLPLLSIIFVTENSIVSAGHDCCPLLFVHDDRGVLSFSSKLDIPKQ-SLQRNLSAMERFRNMDKRASAEHQDTTLHTLHQNSITQLSLYEGDKSSCTKFCTTGMDGALAIWDLKSLEASVQGLRIY 375

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009233.1 (pep scaffold:Pmarinus_7.0:GL478809:196683:231527:-1 gene:ENSPMAG00000008323.1 transcript:ENSPMAT00000009233.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 265.003 bits (676), Expect = 7.050e-85
Identity = 144/377 (38.20%), Postives = 221/377 (58.62%), Query Frame = 1

Query:   67 IICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKI---------------WKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGR---LGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTD-NNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHK---NAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLT 1131
            I C+++NG+ +++A+S N+  V I++    G G    +  L EH+  V  IDW    DRIV+C +DRNAYVW R                   W PTLV+L+ NRAAT VRWSP E+KFAVGS A+L+SVC F+ +N++W+SKH+K+ I+ST+  LDWHP+N ++A GS DF  RVF AY+K  D     + WGS++ F  L+ E  G     GWVH + FS+DGN+L W  H S +CLA        P V  +  + LP+LT+ + ++ +++ AGHDC P  + ++ +  L+    LD   +  A  ++SA+  F+   + A+ E  +S      K    ++ ++ +L+G   + +VL + G DG  V+W+L+ +T
Sbjct:   11 ITCYAWNGDRSQVALSPNNESVHIYQRSS-GSGWIK-VDELAEHSGRVTGIDWAPGTDRIVTCGSDRNAYVWTRRGAQQQQQGSAPAAGVTSGWGPTLVLLRFNRAATCVRWSPREDKFAVGSGARLVSVCYFEKDNNWWVSKHIKKPISSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYVKEVDEKPAPTPWGSRMPFGELMAELTGSHSAGGWVHGLCFSQDGNRLAWVAHDSTVCLADPRLDKDAP-VGVLKTDFLPLLTITFISDNSLVAAGHDCYPVLLTSEASGALRVAGKLDRGRQ-GATKNLSARDMFRTKGKKASAEEGDSAWTVTDKLNEESLKQLSVLEGDKAKCRVLCSSGMDGSFVIWNLEVMT 383

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Sea Lamprey
Match: ciao1 (cytosolic iron-sulfur assembly component 1 [Source:NCBI gene;Acc:795104])

HSP 1 Score: 49.2914 bits (116), Expect = 9.395e-7
Identity = 38/132 (28.79%), Postives = 54/132 (40.91%), Query Frame = 1

Query:  160 KGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLN-RAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVF 552
            KG    LHRL  H     S+ W      I SC  D+   VW R    W    V+   + R    V WSP   + A  S      V S   + DF ++  L+ + N  +  + W P  N++A  S D  V ++
Sbjct:    2 KGSLQVLHRLAGHQDRAWSVAWSPSGALIASCGGDKTVRVWGREGDGWVCRSVLADAHQRTVRNVAWSPCGTRLASASFDATTCVWSR-RDGDFEVTATLEGHENE-VKGVAWAPSGNLLATCSRDKSVWIW 131

HSP 2 Score: 49.2914 bits (116), Expect = 9.734e-7
Identity = 32/119 (26.89%), Postives = 53/119 (44.54%), Query Frame = 1

Query:  196 HTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVF 552
            H  TVR++ W     R+ S S D    VW+R D  ++ T  +         V W+P  N  A  S  K + +   D   D+  +  L  +    +  + WHP++ V+A  S D  +R++
Sbjct:   59 HQRTVRNVAWSPCGTRLASASFDATTCVWSRRDGDFEVTATLEGHENEVKGVAWAPSGNLLATCSRDKSVWIWEVDEEEDYECASVLNSHTQD-VKHVVWHPNSEVLASASYDNSIRLY 176

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Yeast
Match: ARC40 (Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches [Source:SGD;Acc:S000000438])

HSP 1 Score: 186.808 bits (473), Expect = 3.093e-55
Identity = 124/390 (31.79%), Postives = 202/390 (51.79%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKV----PEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWAR-SDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDA--PFKESNWGSKLAFNSLLWE-SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKE--------------------EPTANTSISAKHKFQNID---RVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDL 1119
            ++K  +  I  H F+ + + +AV+  + D  +++V    P V          L++H  T+ ++D      RIV+CS DRNAYVW   SD  +KPTLV+L++NRAAT V W+P   KFAVGSSA++I+VC ++  N++W+SKH+K+ I STI CL WH +  ++A G +D  +RVF  ++K  D+      S WG K  F  L+ E  +G   ++H V +     ++ +  H     L  VD  +Q PV      E LP  +L+W  +  ++  G+ C P      +   KF  +LD  +                    + ++   ISA  KF+ +D   +V+T    ++     H+NAI E+R      G+   +S+ G DG++V++ +
Sbjct:   14 VYKLVKAPIYSHCFSQDKSILAVTCET-DCLVYRVSNNTPPV------LFATLKDHDKTITAVDI-SIHGRIVTCSQDRNAYVWEPLSDGTYKPTLVLLRINRAATSVTWAPNGYKFAVGSSARIIAVCYYEHENNWWVSKHIKKPIKSTINCLSWHANGVLLAAGGTDGFMRVFSGFIKGLDSKESVAGSPWGQKFPFGCLIREWYQG--SYIHDVEWRSQMERIAYVAHDGT--LNVVD--YQSPVQSVNAPEGLPYRSLVWINDHEIVCGGYSCHPVLFSEASEGWKFAKNLDKSDNNKSSALTASGNTDELSGNNDESSTFGISALRKFKELDLKGKVSTDVQESA-----HENAIVELRPFAESNGQITQVSSCGLDGKIVIYTI 384

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Nematostella
Match: EDO30959 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZA7])

HSP 1 Score: 286.96 bits (733), Expect = 2.426e-93
Identity = 156/376 (41.49%), Postives = 236/376 (62.77%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPF-KESNWGSKLAFNSLLWE-SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFT--DNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVA-TXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+     I C +FN    ++A S N + V I+K       +++    L EH   V  +DW ++ +R+V+C+ DRNAYVW   +  WKP LVIL++NRAAT VRWSP E+KFAVGS A+LISVC F+ +ND+W+SKH+K+ I ST+  +DWHP+N ++A GSSDF  RVF  ++K  D    +++ WG K +F + L E + GR GWVHSV+FS  G +L W  H S+I +  V+  H+  VV TI  + LP++  IW T  +++ AGH+ +PY +FT  DN++L     LD+ ++   + +ISA  KF+++D+   + E   S  N+ H+N+I+++ I  G         T G DG++V+WD+K+L   I+ LKI
Sbjct:    6 VHELAITPITCFTFNKARNQLAFSPNDHTVHIYKKS---GNKWTADVVLSEHGQRVTDMDWAQESNRLVTCAADRNAYVWTLQEGTWKPMLVILRINRAATCVRWSPKEDKFAVGSGARLISVCYFEKDNDWWVSKHIKKPIRSTVLGIDWHPNNLLLAAGSSDFKARVFSGFIKDVDGKTNRDTEWGKKASFGNCLAEFTNGRGGWVHSVSFSASGTKLAWVGHDSSISV--VNSGHEMKVV-TIQTDLLPLMQCIWITENSIVAAGHNNMPY-LFTHDDNDKLTLIGKLDAPKKKEDSGAISAMAKFRSLDKQGQSAEEGVSSSNTTHENSISKLDIYAGDKSNVSKFVTSGNDGRVVIWDVKSLESSIAGLKI 374

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
Match: arpc1b (actin-related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:101167426])

HSP 1 Score: 312.383 bits (799), Expect = 5.349e-103
Identity = 161/377 (42.71%), Postives = 233/377 (61.80%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXK-HKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            M+Y H F    I CH++N + T++A+  N+++V I+K       +++ +H L+EH   V  IDW  + +RIV+C  DRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I STI  LDWHP+N ++A GS DF  RVF AY+K  +     + WGSK+ F  +L+ES G  GWVHSV FS  GN+L W +H S + +A      +   V ++  E LP+L + + T  ++I AGHDC P     D  +  L FG  LD  ++  A   ISA+ +FQN+DR A+         +  HKN+I++I +L+G   +     T G DG + +WD+KTL   + +LKI
Sbjct:    1 MSY-HSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKD---GAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGADRNAYVWTLKEGVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKPSPTPWGSKMPFGEVLFESGGGGGWVHSVCFSHSGNRLAWVSHDSTVSVAE---GGKTGTVSSLSSETLPLLCVTFITENSLIAAGHDCYPMLFVYDGAKVSLTFGGKLDVPKQ-AAQKGISARERFQNLDRRASETQGTDKDLNTLHKNSISQISLLEGGRSQCTKFCTTGMDGGMSIWDVKTLESAMKDLKI 369

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
Match: arpc1a (actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:101163876])

HSP 1 Score: 308.531 bits (789), Expect = 1.865e-101
Identity = 164/374 (43.85%), Postives = 243/374 (64.97%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWE--SEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDN-NQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            +H+F    I CH++N + T++A+S N+++V I+K       ++   H L+EH   +  IDW  K DRIV+C  DRNAYVW++ + +WKPTLVIL++NRAATFV+WSPLENKFAVGS A+LISVC F+S ND+W+SKH+K+ I STI  LDWHP+N ++A GS DF  RVF AY+K  +     + WGSK+ F ++L E    G  GWVHSV+FS  GN+L W +H S + +  VD S      +T+  E LP+L++I+ +  +++ AGHDC P     D+   L F + LD  ++ +   +ISA  +F+N+D+ AT E  N+ +++ H+N+I ++ I +G   + +   T G DG + +WD K+L   I  L+I
Sbjct:    3 LHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKK---SGNQWVKTHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKPGPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTV--VDSS------KTLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDMGTLSFVSKLDLPKQ-SIQRNISAMERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSLEASIQGLRI 364

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BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
Match: arpc1b (actin-related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:101167426])

HSP 1 Score: 302.368 bits (773), Expect = 7.852e-99
Identity = 161/388 (41.49%), Postives = 233/388 (60.05%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGR-----------LGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQ--LKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXK-HKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKI 1155
            M+Y H F    I CH++N + T++A+  N+++V I+K       +++ +H L+EH   V  IDW  + +RIV+C  DRNAYVW   + +WKPTLVIL++NRAA  V+WSP ENKFAVGS ++LIS+C F+  ND+W+ KH+K+ I STI  LDWHP+N ++A GS DF  RVF AY+K  +     + WGSK+ F  +L+ES G             GWVHSV FS  GN+L W +H S + +A      +   V ++  E LP+L + + T  ++I AGHDC P     D  +  L FG  LD  ++  A   ISA+ +FQN+DR A+         +  HKN+I++I +L+G   +     T G DG + +WD+KTL   + +LKI
Sbjct:    1 MSY-HSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKK---DGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGADRNAYVWTLKEGVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKPSPTPWGSKMPFGEVLFESGGSGAQVQTSGGGGGGWVHSVCFSHSGNRLAWVSHDSTVSVAE---GGKTGTVSSLSSETLPLLCVTFITENSLIAAGHDCYPMLFVYDGAKVSLTFGGKLDVPKQ-AAQKGISARERFQNLDRRASETQGTDKDLNTLHKNSISQISLLEGGRSQCTKFCTTGMDGGMSIWDVKTLESAMKDLKI 380

[Close]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
Match: zgc:86896 (actin-related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:101158771])

HSP 1 Score: 293.508 bits (750), Expect = 1.070e-95
Identity = 150/361 (41.55%), Postives = 227/361 (62.88%), Query Frame = 1

Query:   43 IHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTI-FTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLK 1122
            +H FG   + CH++N + T++A+S N+N V I+   E     +     L EH+  +  IDW  + +RIV+C++DRNAYVW R D +WKPTLV+L++NRAAT V+WSP ENKFA+GS A+LISVC FD  ND+W+SKH+K+ I ST+  L WHP+N ++A GS+D H RVF AY+K  +     + WG+K+ F  +L E +   GWVHSV+FS  G+QL W  H+S+I +A      Q   V  +   +LP++++++A+   ++ AGHDC PY   F     L+F   LD  ++ T+  S+SA   F+N+D+ AT E    +    H+N+I ++ ++ G   +    S++G DG +V+W  K
Sbjct:    3 LHSFGLEPLSCHAWNKDRTQIALSPNNNVVNIY---EKKANDWVKTEELTEHSGRITGIDWAPESNRIVTCASDRNAYVWTRKDGVWKPTLVLLRINRAATCVKWSPQENKFALGSGARLISVCYFDKENDWWLSKHIKKPICSTVLSLSWHPNNILLAAGSADLHCRVFSAYIKDIEDKPGPTAWGAKMPFGEVLMEHKDCGGWVHSVSFSPAGDQLAWVAHNSSISVADATQGKQ---VTQLNTRHLPLVSVLFASASEIVAAGHDCCPYQFTFKSPGSLEFVKKLDMTKQ-TSKGSMSAMQHFRNLDKKATEEDEKDLNTL-HQNSITQLCVVSGDKSKVDKYSSVGLDGAMVIWTFK 355

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BLAST of Actin-related protein 2/3 complex subunit vs. Planmine SMEST
Match: SMESG000015778.1 (SMESG000015778.1)

HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0
Identity = 370/375 (98.67%), Postives = 371/375 (98.93%), Query Frame = 1

Query:   34 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKEEPTANTSISAKHKFQNIDRVATXXXXXXXXXXKHKNAINEIRILKGVVGEAQVLSTIGRDGQLVLWDLKTLTQRISELKIY 1158
            MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTV+GAGHDCIPYTIFTDNNQLK GASLDSKEE TANTSISAKHKFQNIDRVATIESNNSIINSKHKNAINEIRILKG VGEAQVLSTIGRDGQLVLWDLKTLTQRI ELKIY
Sbjct:    1 MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPMENLPILTLIWATNKTVVGAGHDCIPYTIFTDNNQLKLGASLDSKEESTANTSISAKHKFQNIDRVATIESNNSIINSKHKNAINEIRILKGAVGEAQVLSTIGRDGQLVLWDLKTLTQRICELKIY 375

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BLAST of Actin-related protein 2/3 complex subunit vs. Planmine SMEST
Match: SMESG000005136.1 (SMESG000005136.1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.060e-8
Identity = 54/228 (23.68%), Postives = 92/228 (40.35%), Query Frame = 1

Query:   70 ICHSFNGNCTEMAVSVNSNDVFI---------FKVPEVGKGRFSFLHRLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLNRAATF--------VRWSPL-ENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTITCLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLWESEGRLGWVHSVAFSKDGNQLM 699
            IC +F+ +C  +AV   + D+++         +        +F  +     H+  V  + W K +  ++S S+D     W  + K           +  ATF        V  SPL EN    G++ + I+V + D  N     +   R+I+  +TC+ +H ++N IA G  D  VR+F                   +   +L+    G  G V S+ FS DG  L+
Sbjct:  266 ICAAFSKDCDFLAVGTVTGDIYVNWHRTSCRDYPPDNADNAQFDLI---SGHSGAVYEMSWSKNQQLLISASSDGTVKCWRTATK-----------DCIATFSAPGPIWSVDLSPLSENLLVCGTNKESINVYALDHPNPI---RQFSRDIHGAVTCVRFHGNDNYIASGGVDRTVRLF------------------DIRSGTLVRSFTGHKGIVSSLRFSLDGKYLI 458

The following BLAST results are available for this feature:

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Human
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Celegans
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Fly
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Sea Lamprey
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Yeast
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Nematostella
BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
BLAST of Actin-related protein 2/3 complex subunit vs. Planmine SMEST

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ARPC1A	3.495e-103	43.58	actin related protein 2/3 complex subunit 1A [Sour...	[more]
ARPC1B	1.293e-102	41.16	actin related protein 2/3 complex subunit 1B [Sour...	[more]
ARPC1B	1.293e-102	41.16	actin related protein 2/3 complex subunit 1B [Sour...	[more]
ARPC1B	1.293e-102	41.16	actin related protein 2/3 complex subunit 1B [Sour...	[more]
ARPC1B	1.293e-102	41.16	actin related protein 2/3 complex subunit 1B [Sour...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
arx-3	3.966e-94	44.41	Actin-related protein 2/3 complex subunit [Source...	[more]
arx-3	6.894e-94	44.41	Actin-related protein 2/3 complex subunit [Source...	[more]
pfs-2	3.320e-7	27.47	Polyadenylation Factor Subunit homolog [Source:Un...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2


Match Name	E-value	Identity	Description
Arpc1	2.402e-87	40.43	gene:FBgn0001961 transcript:FBtr0080570	[more]
Arpc1	2.402e-87	40.43	gene:FBgn0001961 transcript:FBtr0080569	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
arpc1b	8.460e-105	42.82	actin related protein 2/3 complex, subunit 1B [Sou...	[more]
arpc1b	8.460e-105	42.82	actin related protein 2/3 complex, subunit 1B [Sou...	[more]
arpc1a	2.169e-104	43.85	actin related protein 2/3 complex, subunit 1A [Sou...	[more]
zgc:86896	2.519e-102	42.58	zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]	[more]
zgc:86896	5.679e-102	42.94	zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
parp14.4	1.142e-104	43.09	poly (ADP-ribose) polymerase family, member 14, ge...	[more]
slco4a1	4.064e-102	43.82	solute carrier organic anion transporter family me...	[more]
parp14.4	6.159e-102	43.32	poly (ADP-ribose) polymerase family, member 14, ge...	[more]
slco4a1	1.242e-101	43.84	solute carrier organic anion transporter family me...	[more]
slco4a1	1.449e-101	43.84	solute carrier organic anion transporter family me...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Arpc1a	8.191e-105	44.12	actin related protein 2/3 complex, subunit 1A [Sou...	[more]
Arpc1b	1.128e-101	40.90	actin related protein 2/3 complex, subunit 1B [Sou...	[more]
Arpc1b	9.476e-101	40.79	actin related protein 2/3 complex, subunit 1B [Sou...	[more]
Arpc1a	5.508e-80	51.05	actin related protein 2/3 complex, subunit 1A [Sou...	[more]
Arpc1a	2.391e-47	55.15	actin related protein 2/3 complex, subunit 1A [Sou...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q8AVT9\|AR1AA_XENLA	3.506e-105	44.92	Actin-related protein 2/3 complex subunit 1A-A OS=...	[more]
sp\|A0A1L8EXB5\|AR1AB_XENLA	8.248e-105	45.07	Actin-related protein 2/3 complex subunit 1A-B OS=...	[more]
sp\|Q9R0Q6\|ARC1A_MOUSE	5.729e-104	44.12	Actin-related protein 2/3 complex subunit 1A OS=Mu...	[more]
sp\|Q6GNU1\|AR1BB_XENLA	1.291e-103	42.82	Actin-related protein 2/3 complex subunit 1B-B OS=...	[more]
sp\|Q7ZXD5\|AR1BA_XENLA	1.552e-103	42.82	Actin-related protein 2/3 complex subunit 1B-A OS=...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A564Y9D0	2.027e-118	46.97	Actin-related protein 2/3 complex subunit OS=Hymen...	[more]
A0A0R3UKM4	1.417e-117	46.30	Actin-related protein 2/3 complex subunit OS=Mesoc...	[more]
A0A0R3WHW9	6.695e-117	45.24	Actin-related protein 2/3 complex subunit OS=Hydat...	[more]
A0A0R3SV99	3.151e-114	46.17	Actin-related protein 2/3 complex subunit OS=Hymen...	[more]
H2KSG4	3.841e-114	46.49	Actin-related protein 2/3 complex subunit OS=Clono...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
arpc1b	2.428e-105	42.02	actin related protein 2/3 complex subunit 1B [Sour...	[more]
arpc1b	5.768e-105	42.02	actin related protein 2/3 complex subunit 1B [Sour...	[more]
arpc1a	1.461e-103	43.85	actin related protein 2/3 complex, subunit 1A [Sou...	[more]
zgc:86896	7.895e-103	42.82	actin-related protein 2/3 complex subunit 1A-like ...	[more]
arpc1b	8.068e-102	42.74	actin related protein 2/3 complex subunit 1B [Sour...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3


Match Name	E-value	Identity	Description
ENSPMAT00000005938.1	2.320e-97	39.95	pep scaffold:Pmarinus_7.0:GL476493:396482:410070:1...	[more]
ENSPMAT00000009233.1	7.050e-85	38.20	pep scaffold:Pmarinus_7.0:GL478809:196683:231527:-...	[more]
ciao1	9.395e-7	28.79	cytosolic iron-sulfur assembly component 1 [Source...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
ARC40	3.093e-55	31.79	Subunit of the ARP2/3 complex; ARP2/3 is required ...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO30959	2.426e-93	41.49	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4


Match Name	E-value	Identity	Description
arpc1b	5.349e-103	42.71	actin-related protein 2/3 complex subunit 1B [Sour...	[more]
arpc1a	1.865e-101	43.85	actin related protein 2/3 complex subunit 1A [Sour...	[more]
arpc1b	7.852e-99	41.49	actin-related protein 2/3 complex subunit 1B [Sour...	[more]
zgc:86896	1.070e-95	41.55	actin-related protein 2/3 complex subunit 1A [Sour...	[more]

BLAST of Actin-related protein 2/3 complex subunit vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000015778.1	0.000e+0	98.67	SMESG000015778.1	[more]
SMESG000005136.1	1.060e-8	23.68	SMESG000005136.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30005741 ID=SMED30005741|Name=Actin-related protein 2/3 complex subunit|organism=Schmidtea mediterranea sexual|type=transcript|length=1387bp
GGAAATAGATTTAGGAACTATTTATAAGTTCAAATGGCATATATTCATAA
ATTTGGACAAGTTTCTATTATATGCCATTCATTTAATGGCAATTGCACAG
AAATGGCAGTGTCCGTTAATTCAAATGACGTGTTTATTTTCAAAGTTCCA
GAAGTAGGGAAAGGAAGATTTTCTTTTTTGCACAGACTACAAGAGCATAC
GGCCACTGTTCGTTCAATTGATTGGGGTAAAAAAGAAGATAGAATCGTCA
GTTGTTCCACTGATCGAAATGCATATGTCTGGGCACGGTCTGATAAGATA
TGGAAACCAACATTAGTGATTTTACAGTTAAATCGAGCGGCTACATTTGT
GAGATGGTCTCCTCTAGAAAACAAATTTGCAGTTGGCAGTAGCGCAAAGC
TAATATCTGTTTGTTCTTTTGATTCCAATAACGACTTTTGGATTAGTAAA
CATCTGAAACGAAATATAAATTCAACAATAACCTGTTTGGATTGGCATCC
AGACAATAATGTCATTGCTTGTGGTTCATCAGATTTCCATGTCCGAGTCT
TTTGTGCTTATCTTAAGTCTCATGACGCACCATTTAAAGAAAGCAATTGG
GGTAGTAAATTAGCTTTCAATTCTCTTTTATGGGAAAGTGAAGGGCGTCT
TGGTTGGGTTCATTCTGTCGCATTTTCGAAAGATGGCAATCAATTGATGT
GGAGTACTCATTCGAGTGCGATTTGCTTGGCAACAGTGGATGGATCTCAT
CAGCCTCCTGTCGTGAGAACCATTCCTATGGAGAACCTACCTATCTTGAC
ATTAATTTGGGCAACCAATAAAACTGTAATTGGGGCCGGTCATGACTGTA
TTCCATACACAATCTTCACGGACAACAATCAATTGAAATTTGGCGCTAGT
CTAGACAGCAAGGAAGAACCAACGGCTAATACAAGTATTTCGGCTAAACA
TAAATTTCAAAATATAGATCGAGTCGCAACTATCGAATCCAATAATTCCA
TTATTAATTCCAAACACAAAAATGCTATAAATGAGATTCGAATTCTTAAA
GGAGTTGTTGGAGAGGCTCAAGTGCTTTCGACAATTGGTCGGGATGGACA
GCTTGTTTTATGGGACCTGAAAACTTTAACCCAAAGAATAAGTGAACTAA
AAATTTACTGATTTGCTATTTTCCCAATGCTGTTCTGAAATTATGAGAAA
ACGAGCCACTTTTTCTAGTGTTAATTTCAATAGTGCTAATTATAACGAAC
TTTTCTATTGATTTTTCTCGGCTAAATTGTTTTTGCTGTGTGACGGTGTG
TGTGTGCGTGTGATTGCGTATACATGCTGTGTTTATCCAATGAATGACTA
ATTTCGTTTCATTTTCGATTAATATATTTTCCAACTA

protein sequence of SMED30005741-orf-1

>SMED30005741-orf-1 ID=SMED30005741-orf-1|Name=SMED30005741-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=376bp
MAYIHKFGQVSIICHSFNGNCTEMAVSVNSNDVFIFKVPEVGKGRFSFLH
RLQEHTATVRSIDWGKKEDRIVSCSTDRNAYVWARSDKIWKPTLVILQLN
RAATFVRWSPLENKFAVGSSAKLISVCSFDSNNDFWISKHLKRNINSTIT
CLDWHPDNNVIACGSSDFHVRVFCAYLKSHDAPFKESNWGSKLAFNSLLW
ESEGRLGWVHSVAFSKDGNQLMWSTHSSAICLATVDGSHQPPVVRTIPME
NLPILTLIWATNKTVIGAGHDCIPYTIFTDNNQLKFGASLDSKEEPTANT
SISAKHKFQNIDRVATIESNNSIINSKHKNAINEIRILKGVVGEAQVLST
IGRDGQLVLWDLKTLTQRISELKIY*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003779	actin binding
GO:0005515	protein binding

Vocabulary: **cellular component**
Term	Definition
GO:0005737	cytoplasm
GO:0005856	cytoskeleton
GO:0015629	actin cytoskeleton
GO:0005885	Arp2/3 protein complex

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000034	epidermis
PLANA:0000070	intestinal phagocyte
PLANA:0000101	muscle cell
PLANA:0000142	posterior region of the whole animal
PLANA:0002032	epidermal cell
PLANA:0002056	medial muscle cell
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR001680	WD40_repeat
IPR017383	ARPC1
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom

Vocabulary: **biological process**
Term	Definition
GO:0030833	regulation of actin filament polymerization
GO:0034314	Arp2/3 complex-mediated actin nucleation

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 138..174 e-value: 4.4E-4 score: 29.6 coord: 89..128 e-value: 98.0 score: 4.4 coord: 195..234 e-value: 79.0 score: 5.0 coord: 45..84 e-value: 1.0E-4 score: 31.7 coord: 319..361 e-value: 250.0 score: 1.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 48..83 e-value: 0.094 score: 13.6 coord: 139..173 e-value: 2.2E-5 score: 25.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 52..83 score: 10.709
IPR017383	Actin-related protein 2/3 complex subunit 1	PIRSF	PIRSF038093	ARPC1	coord: 1..368 e-value: 4.9E-121 score: 401.8
IPR017383	Actin-related protein 2/3 complex subunit 1	PANTHER	PTHR10709	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1	coord: 4..363
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 1..362 e-value: 1.2E-117 score: 394.9
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 348..362
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 52..173 score: 9.573
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 12..368