Intraflagellar transport protein 27-like

Overview
NameIntraflagellar transport protein 27-like
Smed IDSMED30005722
Length (bp)623
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Intraflagellar transport protein 27-like (SMED30005722) t-SNE clustered cells

Violin plots show distribution of expression levels for Intraflagellar transport protein 27-like (SMED30005722) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Intraflagellar transport protein 27-like (SMED30005722) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Intraflagellar transport protein 27-like (SMED30005722) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30005722

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30005722SMESG000053198.1 SmedASXL_009130SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30005722SMESG000053198.1 SmedASXL_009131SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30005722SMESG000053198.1 dd_Smed_v6_11026_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
epidermisSMED30005722SMESG000053198.1 dd_Smed_v4_11026_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Match: IFT27 (intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626])

HSP 1 Score: 149.058 bits (375), Expect = 5.450e-45
Identity = 72/181 (39.78%), Postives = 113/181 (62.43%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQ 571
            +  KC++ GD  VGK+ + Q+F SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P VL+GNK DL+ RR V   +   +        FE S KE +   EA  H L KQ++ LY++ +  F+
Sbjct:    4 LAAKCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETSVKEMENF-EAPFHCLAKQFHQLYREKVEVFR 183
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Match: IFT27 (intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626])

HSP 1 Score: 143.665 bits (361), Expect = 7.607e-43
Identity = 72/181 (39.78%), Postives = 112/181 (61.88%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQ 571
            +  KC I+ D  VGK+ + Q+F SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P VL+GNK DL+ RR V   +   +        FE S KE +   EA  H L KQ++ LY++ +  F+
Sbjct:    4 LAAKC-ILADPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETSVKEMENF-EAPFHCLAKQFHQLYREKVEVFR 182
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Match: IFT27 (intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626])

HSP 1 Score: 125.561 bits (314), Expect = 9.766e-36
Identity = 56/124 (45.16%), Postives = 86/124 (69.35%), Query Frame = 2 
Query:   50 IIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNV 421
            + GD  VGK+ + Q+F SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P VL+GNK DL+ RR V
Sbjct:   49 VRGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAV 172
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Match: IFT27 (intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626])

HSP 1 Score: 111.694 bits (278), Expect = 4.681e-31
Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 2 
Query:  101 SDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECS 481
            SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P VL+GNK DL+ RR V   +   +        FE S
Sbjct:    2 SDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETS 128
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Match: IFT27 (intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626])

HSP 1 Score: 108.227 bits (269), Expect = 6.628e-30
Identity = 48/114 (42.11%), Postives = 77/114 (67.54%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIP 373
            +  KC I+ D  VGK+ + Q+F SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P
Sbjct:    4 LAAKC-ILADPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLP 116
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Match: unc-108 (pep chromosome:WBcel235:I:3824947:3826514:1 gene:WBGene00006833.1 transcript:F53F10.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:unc-108)

HSP 1 Score: 88.1965 bits (217), Expect = 1.617e-21
Identity = 53/166 (31.93%), Postives = 87/166 (52.41%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYY 538
            K +IIGD+ VGKS +   F    +     + +T GV+   ++V +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I   K+ Y
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMVTIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQ-HSNSNMVIMLIGNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIY 168
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Match: unc-108 (pep chromosome:WBcel235:I:3822883:3826514:1 gene:WBGene00006833.1 transcript:F53F10.4b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:unc-108)

HSP 1 Score: 87.8113 bits (216), Expect = 2.629e-21
Identity = 53/166 (31.93%), Postives = 87/166 (52.41%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYY 538
            K +IIGD+ VGKS +   F    +     + +T GV+   ++V +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I   K+ Y
Sbjct:   17 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMVTIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQ-HSNSNMVIMLIGNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIY 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Match: rab-14 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q93874])

HSP 1 Score: 84.7297 bits (208), Expect = 3.331e-20
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            K +IIGD  VGKS +   F    +    +   T GV+  T+++ V  S   +++  +D AG+E F  + +  +      ++V+D+T   +++    WL   +SL ++    + LIGNK DL  +R+V  E+   F  +N   + ECSAK    V +A +   KQ Y   +D
Sbjct:   13 KYIIIGDMGVGKSCLLHQFTE--KKFMADCPHTIGVEFGTRIIEV--SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSL-TNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQD 178
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Match: rab-14 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q93874])

HSP 1 Score: 84.7297 bits (208), Expect = 3.331e-20
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            K +IIGD  VGKS +   F    +    +   T GV+  T+++ V  S   +++  +D AG+E F  + +  +      ++V+D+T   +++    WL   +SL ++    + LIGNK DL  +R+V  E+   F  +N   + ECSAK    V +A +   KQ Y   +D
Sbjct:   13 KYIIIGDMGVGKSCLLHQFTE--KKFMADCPHTIGVEFGTRIIEV--SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSL-TNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQD 178
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Match: rab-7 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q23146])

HSP 1 Score: 83.5741 bits (205), Expect = 9.404e-20
Identity = 57/193 (29.53%), Postives = 92/193 (47.67%), Query Frame = 2 
Query:   11 MMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRV---RSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCR-KNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            M  T K    K +I+GDS VGK+++   + +  +     Y  T G D LT+ V + +   +++I  +D AG+E F ++    +      ++ FD+TN  SF +   W D      S R     P VL+GNK+DL  +R V  +    +C+ K +  Y+E SAKE   V  A + + +          N+F  F
Sbjct:    1 MSGTRKKALLKVIILGDSGVGKTSLMNQYVN--RRFSNQYKATIGADFLTRDVNIDDRTVTLQI--WDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQETNDFPEF 189
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Match: Rab2 (gene:FBgn0014009 transcript:FBtr0336658)

HSP 1 Score: 88.5817 bits (218), Expect = 1.451e-21
Identity = 52/178 (29.21%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SA+    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Match: Rab2 (gene:FBgn0014009 transcript:FBtr0086124)

HSP 1 Score: 88.5817 bits (218), Expect = 1.451e-21
Identity = 52/178 (29.21%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SA+    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0333549)

HSP 1 Score: 86.6557 bits (213), Expect = 7.335e-21
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYD 541
            K LIIGDS VGKS++   F  D      +Y  T GVD   + V +      V++  +D AG+E F  I    +     VIVV+D+TN  SF+   +WL+ +++   D+ +  VL+GNK D   R+ V  ED   F ++ D   FE SAK+N  V    + + +Q  D
Sbjct:   10 KLLIIGDSGVGKSSLLIRFSDD--TFSGSYITTIGVDFKIRTVDI--EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDV-VKKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0303258)

HSP 1 Score: 86.6557 bits (213), Expect = 7.335e-21
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYD 541
            K LIIGDS VGKS++   F  D      +Y  T GVD   + V +      V++  +D AG+E F  I    +     VIVV+D+TN  SF+   +WL+ +++   D+ +  VL+GNK D   R+ V  ED   F ++ D   FE SAK+N  V    + + +Q  D
Sbjct:   10 KLLIIGDSGVGKSSLLIRFSDD--TFSGSYITTIGVDFKIRTVDI--EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDV-VKKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0070028)

HSP 1 Score: 86.6557 bits (213), Expect = 7.335e-21
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYD 541
            K LIIGDS VGKS++   F  D      +Y  T GVD   + V +      V++  +D AG+E F  I    +     VIVV+D+TN  SF+   +WL+ +++   D+ +  VL+GNK D   R+ V  ED   F ++ D   FE SAK+N  V    + + +Q  D
Sbjct:   10 KLLIIGDSGVGKSSLLIRFSDD--TFSGSYITTIGVDFKIRTVDI--EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDV-VKKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Match: ift27 (intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9])

HSP 1 Score: 151.754 bits (382), Expect = 3.706e-46
Identity = 70/174 (40.23%), Postives = 108/174 (62.07%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            +R +C+++GD+ VGKST+ Q+FCSDG    KNY+M  GV++L K VP+P+++ SVE+  YD AG+E F +  +  W  P +V VVFD+T++ SF+   +W+DRV++    +  P VL+GNK DL+ RR V       F + +   Y E SAKE        + L   ++ LY++
Sbjct:    4 LRARCVVVGDAAVGKSTLCQMFCSDGAVYQKNYTMNVGVELLEKTVPIPDTSDSVELFIYDSAGRELFSDACENVWSQPSVVCVVFDVTSEASFNNCSRWIDRVQTHSHGLHTPGVLVGNKCDLTSRREVDAAAAQAFAQTHTLQYHETSAKEIGHYEAPFLSLAAAFHSLYQE 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Match: rab39ba (RAB39B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-070620-7])

HSP 1 Score: 88.9669 bits (219), Expect = 1.698e-21
Identity = 54/180 (30.00%), Postives = 93/180 (51.67%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK 550
            M  + + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF    +WL+  RS      I  +L+G+K DL  +R V Q++           Y E SA++   V +A   L +  ++L K
Sbjct:    1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFILVGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVEKAFTELTRDIFELVK 176
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Match: rab2a (RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2])

HSP 1 Score: 88.5817 bits (218), Expect = 1.753e-21
Identity = 53/178 (29.78%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Match: cracr2ab (calcium release activated channel regulator 2Ab [Source:ZFIN;Acc:ZDB-GENE-041210-94])

HSP 1 Score: 92.4337 bits (228), Expect = 2.100e-21
Identity = 51/163 (31.29%), Postives = 95/163 (58.28%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVK 529
            K +++G+S+VGK+ + + FC DGQ      S T G+D   + + + +S+ ++++  +D AG+E + +I ++ +     V+V++D+T + SFS+   WL  ++    D  IPV+L+GNK D    R V+ ++      + +  ++ECSA     V EA+IHL +
Sbjct:  588 KVILVGNSSVGKTALLRRFC-DGQ-FHSATSATVGIDYSVRTLNLGDSHVALQL--WDTAGQERYRSITKQFFRKADGVVVIYDITMEDSFSSVRPWLSSIQEAVGD-PIPVMLLGNKSDKENEREVQTKEADLLAEEANLMFYECSAYTGANVLEAMIHLAR 745
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Match: rab39bb (RAB39B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-061215-104])

HSP 1 Score: 88.1965 bits (217), Expect = 2.783e-21
Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            M  + + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF    +WL+  RS      I  +L+G+K DL  +R V Q++           Y E SA++   V  A   L +  ++L K+
Sbjct:    1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLLVGHKCDLEPQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKN 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Match: ift27 (intraflagellar transport 27 [Source:NCBI gene;Acc:100216008])

HSP 1 Score: 164.466 bits (415), Expect = 8.011e-51
Identity = 76/182 (41.76%), Postives = 115/182 (63.19%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            +  KC++ GD+TVGKST+ QLF SDG +  KNYSMTT +++  K V +P++  SVE+   D  GK  FY + +K WD PG + +VFD+TN+ SFS+  KWL RVR+     ++P VL+GNK D++ RR V++    ++   N   YFE SAKE +   +    L K ++ LY++ +  F++ 
Sbjct:   23 LSAKCIVAGDTTVGKSTLVQLFRSDGSHFPKNYSMTTSMEVSVKNVQIPDTGDSVELFLCDSPGKAIFYEVTEKLWDQPGALCLVFDVTNESSFSSCAKWLQRVRAKTFSPQLPGVLVGNKTDMAGRRAVERGQAEEWAASNGLEYFETSAKELENFEQPFQALAKAFHHLYQERVENFRSL 204
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Match: ift27 (intraflagellar transport 27 [Source:NCBI gene;Acc:100216008])

HSP 1 Score: 164.466 bits (415), Expect = 9.204e-51
Identity = 76/182 (41.76%), Postives = 115/182 (63.19%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            +  KC++ GD+TVGKST+ QLF SDG +  KNYSMTT +++  K V +P++  SVE+   D  GK  FY + +K WD PG + +VFD+TN+ SFS+  KWL RVR+     ++P VL+GNK D++ RR V++    ++   N   YFE SAKE +   +    L K ++ LY++ +  F++ 
Sbjct:   28 LSAKCIVAGDTTVGKSTLVQLFRSDGSHFPKNYSMTTSMEVSVKNVQIPDTGDSVELFLCDSPGKAIFYEVTEKLWDQPGALCLVFDVTNESSFSSCAKWLQRVRAKTFSPQLPGVLVGNKTDMAGRRAVERGQAEEWAASNGLEYFETSAKELENFEQPFQALAKAFHHLYQERVENFRSL 209
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Match: hus1 (HUS1 checkpoint clamp component [Source:Xenbase;Acc:XB-GENE-983295])

HSP 1 Score: 87.0409 bits (214), Expect = 1.245e-20
Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +FS    WL+  R   S   + ++LIGNK DL  RR+V +E+   F R++   + E SAK    V EA I   K+ Y   +  L +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMINIDGKPIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQ-HSSSNMVIILIGNKSDLESRRDVSREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYKKIQQGLFDVNN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Match: RAB2A (RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:100038062])

HSP 1 Score: 86.6557 bits (213), Expect = 1.372e-20
Identity = 52/178 (29.21%), Postives = 93/178 (52.25%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LI NK DL  RR VK+E+   F R++   + E SAK    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSNSNMVIMLIANKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Match: nr6a1 (nuclear receptor subfamily 6 group A member 1 [Source:Xenbase;Acc:XB-GENE-487592])

HSP 1 Score: 85.5001 bits (210), Expect = 4.079e-20
Identity = 52/180 (28.89%), Postives = 93/180 (51.67%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK 550
            M  + + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF    +WL+  ++     +I  VL+G+K DL  +R V + +           Y E SA++   V +A   L +  Y+L +
Sbjct:    1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKAHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLASSFGMRYIETSARDAINVEKAFTELTRDIYELVR 176
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Match: Ift27 (intraflagellar transport 27 [Source:MGI Symbol;Acc:MGI:1914292])

HSP 1 Score: 151.369 bits (381), Expect = 5.912e-46
Identity = 75/183 (40.98%), Postives = 114/183 (62.30%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQNF 577
            +  KC++ GD  VGK+ + Q+F SDG +  KNY++TTGVD++ K VPV ++N SVE+  +D AGKE F  ++ K W++P ++ +V+D+TN+ SF +  KWL++VRS  S I +P VL+G K DL+ R+ V       +       +FE S KE     EA  H L KQ+Y LY++ ++ F   
Sbjct:    4 LAAKCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRSQTSGISLPGVLVGTKTDLAGRQTVDSAQAQVWALSQGLEFFETSVKEMDNY-EAPFHCLAKQFYQLYREKVDIFHTL 185
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Match: Ift27 (intraflagellar transport 27 [Source:MGI Symbol;Acc:MGI:1914292])

HSP 1 Score: 130.183 bits (326), Expect = 5.346e-38
Identity = 67/163 (41.10%), Postives = 101/163 (61.96%), Query Frame = 2 
Query:   92 LFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQNF 577
            +F SDG +  KNY++TTGVD++ K VPV ++N SVE+  +D AGKE F  ++ K W++P ++ +V+D+TN+ SF +  KWL++VRS  S I +P VL+G K DL+ R+ V       +       +FE S KE     EA  H L KQ+Y LY++ ++ F   
Sbjct:    1 MFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRSQTSGISLPGVLVGTKTDLAGRQTVDSAQAQVWALSQGLEFFETSVKEMDNY-EAPFHCLAKQFYQLYREKVDIFHTL 162
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Match: Ift27 (intraflagellar transport 27 [Source:MGI Symbol;Acc:MGI:1914292])

HSP 1 Score: 105.916 bits (263), Expect = 2.611e-29
Identity = 47/99 (47.47%), Postives = 73/99 (73.74%), Query Frame = 2 
Query:   53 IGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRS 349
            +GD  VGK+ + Q+F SDG +  KNY++TTGVD++ K VPV ++N SVE+  +D AGKE F  ++ K W++P ++ +V+D+TN+ SF +  KWL++VRS
Sbjct:    1 MGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRS 99
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Match: Rab29 (RAB29, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2385107])

HSP 1 Score: 88.5817 bits (218), Expect = 1.737e-21
Identity = 55/168 (32.74%), Postives = 95/168 (56.55%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKW---LDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKND-TAYFECSAKENQGVTEAVIHLVKQ 532
            K L++GD+ VGK+++ Q +  D  +  K+Y  T GVD   K++   +S   V +  +D AG+E F ++ +  +      +++FD+TN  +FS + +W   LD   +L S   +P +L+ NK DLS    V ++ I  F ++N  T + E S KEN+ + EA+  LV++
Sbjct:    9 KVLVVGDAAVGKTSLVQRYSQD--SFSKHYKSTVGVDFALKVLQWSDSEM-VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDLS-PWAVSRDQIDQFSKENGFTGWTETSVKENKNINEAMRVLVEK 172
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Match: Rab29 (RAB29, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2385107])

HSP 1 Score: 88.5817 bits (218), Expect = 1.737e-21
Identity = 55/168 (32.74%), Postives = 95/168 (56.55%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKW---LDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKND-TAYFECSAKENQGVTEAVIHLVKQ 532
            K L++GD+ VGK+++ Q +  D  +  K+Y  T GVD   K++   +S   V +  +D AG+E F ++ +  +      +++FD+TN  +FS + +W   LD   +L S   +P +L+ NK DLS    V ++ I  F ++N  T + E S KEN+ + EA+  LV++
Sbjct:    9 KVLVVGDAAVGKTSLVQRYSQD--SFSKHYKSTVGVDFALKVLQWSDSEM-VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDLS-PWAVSRDQIDQFSKENGFTGWTETSVKENKNINEAMRVLVEK 172
[Close]
BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Match: sp|Q0VCN3|IFT27_BOVIN (Intraflagellar transport protein 27 homolog OS=Bos taurus OX=9913 GN=IFT27 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.622e-46
Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQ 571
            +  KC++ GD TVGK+ + QLF SDG +  KNY++TTGVD++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS      +P VL+GNK DL+ RR V       +        FE S KE +       +L KQ++ LY++ L  FQ
Sbjct:    4 LAAKCILAGDPTVGKTALAQLFRSDGAHFQKNYTLTTGVDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEQSFTNCSKWLEKARSQIPGTTLPGVLVGNKTDLAGRRVVDVAQAQAWALGQGLECFETSVKEMENYEAPFHYLAKQFHHLYREKLEVFQ 183
[Close]
BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Match: sp|Q9D0P8|IFT27_MOUSE (Intraflagellar transport protein 27 homolog OS=Mus musculus OX=10090 GN=Ift27 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.135e-45
Identity = 75/183 (40.98%), Postives = 114/183 (62.30%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQNF 577
            +  KC++ GD  VGK+ + Q+F SDG +  KNY++TTGVD++ K VPV ++N SVE+  +D AGKE F  ++ K W++P ++ +V+D+TN+ SF +  KWL++VRS  S I +P VL+G K DL+ R+ V       +       +FE S KE     EA  H L KQ+Y LY++ ++ F   
Sbjct:    4 LAAKCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRSQTSGISLPGVLVGTKTDLAGRQTVDSAQAQVWALSQGLEFFETSVKEMDNY-EAPFHCLAKQFYQLYREKVDIFHTL 185
[Close]
BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Match: sp|Q9BW83|IFT27_HUMAN (Intraflagellar transport protein 27 homolog OS=Homo sapiens OX=9606 GN=IFT27 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.617e-44
Identity = 72/181 (39.78%), Postives = 113/181 (62.43%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIH-LVKQYYDLYKDCLNEFQ 571
            +  KC++ GD  VGK+ + Q+F SDG +  K+Y++TTG+D++ K VPVP++  SVE+  +D AGKE F  ++ K W+ P ++ +V+D+TN+ SF+   KWL++ RS    I +P VL+GNK DL+ RR V   +   +        FE S KE +   EA  H L KQ++ LY++ +  F+
Sbjct:    4 LAAKCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETSVKEMENF-EAPFHCLAKQFHQLYREKVEVFR 183
[Close]
BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Match: sp|A8HN58|IFT27_CHLRE (Intraflagellar transport protein 27 OS=Chlamydomonas reinhardtii OX=3055 GN=IFT27 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.295e-28
Identity = 57/202 (28.22%), Postives = 110/202 (54.46%), Query Frame = 2 
Query:    5 IQMMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPV--VLIGNKLDLSMRRNVKQEDIS-DFCRKNDTAYFECSA-KENQGVTEAVIHLVKQYYDLYKDCLNEFQNF*KHSCKN 598
            ++ +     +R K  ++G++TVGKS +  +F S G    K+Y+MT+GV+++   V +P++  SVE+   D AG + +   + + W+     I+VFD+++  SF +   W + ++S R D + P+  VL+ NK DL  +R+  + D++ D+   N   +F+ SA    +      + +   +Y  Y+D +  FQ+    +C+N
Sbjct:    6 VKPIDITATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYRNYEDKVAAFQD----ACRN 203
[Close]
BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Match: sp|Q580S0|IFT27_TRYB2 (Intraflagellar transport protein 27 homolog OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb927.3.5550 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.228e-25
Identity = 54/180 (30.00%), Postives = 96/180 (53.33%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPV-VLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEF 568
            +R +  ++G  TVGK+   Q+  S+G    KNY MT G D + K VPV + N +VE++ +D +G+  +  +V     +  + IV++D++N V+F    +W+++V   R++ K  V +LI NK DLS +  V      D    N   +++ S     G+TE +  + + Y D Y+  + + 
Sbjct:    4 LRLQVAVVGAPTVGKTAFVQMLHSNGTTFPKNYLMTLGCDFIVKEVPVDDDN-TVEMIIFDVSGQREYEPMVSSYLQNTAVFIVMYDVSNKVTFEACARWVNQV---RTNSKESVGILIANKSDLSDKAEVTDRQGKDLANANKMKFYKISTLRGVGITEPIDEIARHYVDAYQKRIEQL 179
[Close]
BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Match: A0A210PN19 (Intraflagellar transport protein 27-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT05558 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.597e-60
Identity = 87/180 (48.33%), Postives = 127/180 (70.56%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQ 571
            +R KC+I+GD+TVGKS+I+Q+F SDG +  KNY+MT GV++L K V +PE+  SVE+  YD AGKE F + V+K WDHP ++I+VFD+T++ SFS+  KWL+RVRS + D+ +P VLIGNK+DL  R+ +  +  + F   N   YFECS+KE Q V     +L  ++Y LY++ +  F+
Sbjct:    5 LRAKCVIVGDTTVGKSSISQMFHSDGSHFAKNYTMTAGVELLVKSVNIPETRDSVELFLYDSAGKEIFSDYVKKFWDHPSVIIIVFDVTSETSFSSCAKWLERVRSEKPDVHMPGVLIGNKIDLEQRQVISPKAATHFAESNGLKYFECSSKEFQNVEAPFYYLANEFYKLYQERVEHFK 184
[Close]
BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Match: A0A1S3HED6 (intraflagellar transport protein 27 homolog OS=Lingula unguis OX=7574 GN=LOC106154539 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.040e-59
Identity = 87/183 (47.54%), Postives = 126/183 (68.85%), Query Frame = 2 
Query:   29 IIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            I+R KC+++GDSTVGKS +TQ+F SDG +  KNY++T GV++L K V +P+SN  VE+  YD AGKE FY IVQK WDHP +V++V+D+T++ SF +  KWL+RVRS + +++ P VL+ NK+DL  RR +  +   DF + N   YFE SAKE Q V      L  +++ +YK+ L +F+  
Sbjct:    4 ILRAKCIVVGDSTVGKSALTQVFHSDGTHYPKNYTLTAGVELLVKAVNIPDSNDCVELYIYDSAGKEIFYEIVQKHWDHPSVVMLVYDVTSETSFDSCAKWLERVRSQKPEMQFPGVLVANKIDLDQRRVISPKAGKDFAQSNGLEYFEVSAKEMQQVEAPFYFLANEFHKMYKERLEQFKTL 186
[Close]
BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Match: R7TKS8 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_6071 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.211e-57
Identity = 88/182 (48.35%), Postives = 126/182 (69.23%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            +R KC+I+GDS  GKS ITQ+F SDG +  KNY+MTTGV+++TK V V +++ +VE+  YD AGKE F ++VQ  W +P MV+VV+D+TN+ SF++  KWL+RVRS +  + +P VLI NK+DL  RR V  ++  DF   N   YFECSAKE Q V +  ++L K ++ LY+D +  F + 
Sbjct:    5 LRAKCIIVGDSCSGKSAITQVFHSDGSHFPKNYAMTTGVELVTKPVHVQDTHDAVELFIYDSAGKELFSDMVQNHWANPSMVVVVYDVTNETSFNSCAKWLERVRSQKPSVTMPSVLIANKIDLDERRVVSMKEGQDFADSNGLEYFECSAKEMQNVEQPFLYLAKTFHKLYQDRIEYFMSM 186
[Close]
BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Match: R7T6X3 (Uncharacterized protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_80634 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.052e-57
Identity = 87/174 (50.00%), Postives = 123/174 (70.69%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            +R KC+I+GDS  GKS ITQ+F SDG +  KNY+MTTGV+++TK V V +++ +VE+  YD AGKE F ++VQ  W +P MV+VV+D+TN+ SF++  KWL+RVRS +  + +P VLI NK+DL  RR V  ++  DF   N   YFECSAKE Q V +  ++L K ++ LY+D
Sbjct:    5 LRAKCIIVGDSCSGKSAITQVFHSDGSHFPKNYAMTTGVELVTKPVHVQDTHDAVELFIYDSAGKELFSDMVQNHWANPSMVVVVYDVTNETSFNSCAKWLERVRSQKPSVTMPSVLIANKIDLDERRVVSMKEGQDFADSNGLEYFECSAKEMQNVEQPFLYLAKTFHKLYQD 178
[Close]
BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Match: A0A2C9LP30 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106060744 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.874e-57
Identity = 89/180 (49.44%), Postives = 123/180 (68.33%), Query Frame = 2 
Query:   29 IIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEF 568
            I+R KCLI+GDSTVGKS+ITQ+F SD  +  KNY+MT GV++L K V +PES+ SVE   YDCAG++ F +IVQK WDHP +V+VV+D TN+ SFS   KWL+++RS  S +KIP  L+ NK+DL  RR +  +   +  + +   YFECSAKE Q V      L  +++ LY++ +  F
Sbjct:    4 ILRCKCLIVGDSTVGKSSITQVFHSDSSHFPKNYTMTQGVELLVKPVNIPESSDSVEFYLYDCAGRDTFIDIVQKFWDHPSVVMVVYDCTNENSFSNCTKWLEKIRSQNSHLKIPGALVANKIDLEQRRMISPKQGRELAQSHKLEYFECSAKEMQHVDVPFFFLANEFHKLYQERVELF 183
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Match: ift27 (intraflagellar transport 27 [Source:NCBI gene;Acc:103038893])

HSP 1 Score: 163.31 bits (412), Expect = 8.956e-51
Identity = 73/174 (41.95%), Postives = 114/174 (65.52%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            +R +C+++GD+ VGKS ++Q+F SDG +  KNYSMT GV++L K V +PE++ SVE+  YD AG+E F    +K W  P +V VVFD+++  SF++  +WL RVR+  + +++P VL+GNK DLS RR V++    D+ +     Y E SAKE +      + L + +Y LY++
Sbjct:    4 LRARCILVGDAAVGKSALSQMFRSDGAHFQKNYSMTAGVELLVKPVNIPETSDSVELYIYDSAGRETFAEACEKMWGQPSVVCVVFDISSLASFNSCSRWLQRVRAHCNGLQVPGVLVGNKSDLSSRREVEETTAQDWAQSQGLQYHETSAKEMENCDAPFLSLAQAFYTLYQE 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Match: rab2a (RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:103041250])

HSP 1 Score: 88.9669 bits (219), Expect = 1.366e-21
Identity = 53/178 (29.78%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Match: rab39ba (ras-related protein Rab-39B [Source:NCBI gene;Acc:103034714])

HSP 1 Score: 87.8113 bits (216), Expect = 3.630e-21
Identity = 54/180 (30.00%), Postives = 92/180 (51.11%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK 550
            M  + + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF    +WL+  RS      I  +L+G+K DL  +R V Q++           Y E SA++   V  A   L +  ++L K
Sbjct:    1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLLVGHKCDLDAQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVK 176
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Match: ENSAMXT00000003791.2 (ras-related protein Rab-39B-like [Source:NCBI gene;Acc:103045353])

HSP 1 Score: 86.2705 bits (212), Expect = 1.406e-20
Identity = 53/180 (29.44%), Postives = 92/180 (51.11%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK 550
            M  + + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF    +WL+  RS      I  +L+G+K DL  +R V +++           Y E SA++   V  A   L +  ++L K
Sbjct:    1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLLVGHKCDLEAQRQVTRQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVK 176
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Match: rab14 (ras-related protein Rab-14 [Source:NCBI gene;Acc:103026976])

HSP 1 Score: 83.1889 bits (204), Expect = 2.004e-19
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            K +IIGD  VGKS +   F    +    +   T GV+  T+++ V  S   V++  +D AG+E F  + +  +      ++V+D+T   +++    WL   R+L ++    ++LIGNK DL  +R+V  E+   F  +N   + E SAK  + V +A +   K+ Y   +D
Sbjct:   13 KYIIIGDMGVGKSCLLHQFTE--KKFMADCPHTIGVEFGTRIIEV--SGQKVKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL-TNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQD 178
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Match: ift27 (intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9])

HSP 1 Score: 163.696 bits (413), Expect = 1.225e-51
Identity = 80/170 (47.06%), Postives = 106/170 (62.35%), Query Frame = 2 
Query:   44 CLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            CL+ GDSTVGKS + Q F SD     KNY+MT GV++L K V VP++  SVEI  YD  GK+ F ++VQK WDHP M+ +VFD+TN+ S     KWL+RVR+    +  P VL+GNK+DL  RR V      +F   N   YFE SAKE + +    ++L K ++ LY D
Sbjct:    4 CLLTGDSTVGKSALVQAFHSDATLFPKNYNMTVGVELLVKSVGVPDTTDSVEIYLYDSGGKDIFNDLVQKNWDHPSMLCLVFDVTNEQSLGGCGKWLERVRAQSPGVPFPGVLVGNKVDLGPRRVVSAAQGQEFAIANGLEYFETSAKEMENIDTPFLYLAKAFHRLYVD 173
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Match: rab2a (RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2])

HSP 1 Score: 88.9669 bits (219), Expect = 2.712e-22
Identity = 53/178 (29.78%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQVKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLESRREVKREEGEAFAREHGLVFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Match: RAB2B (RAB2B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:20246])

HSP 1 Score: 87.4261 bits (215), Expect = 5.799e-22
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYY 538
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S   + ++LIGNK DL  RR+VK+E+   F R++   + E SAK    V EA I+  K+ Y
Sbjct:   13 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMINIDGKQVKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSSSNMIIMLIGNKSDLESRRDVKREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 173
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Match: RAB2B (RAB2B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:20246])

HSP 1 Score: 86.2705 bits (212), Expect = 3.116e-21
Identity = 52/178 (29.21%), Postives = 93/178 (52.25%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK E+   F R++   + E SAK    V EA I+  ++ Y+  ++ + +  N
Sbjct:   13 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMIAIGGKQVKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTAWLEDARQ-HSNSNMVIMLIGNKSDLESRREVKCEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKIQEGVFDVNN 185
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Match: rab30 (RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250])

HSP 1 Score: 85.8853 bits (211), Expect = 3.521e-21
Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFK-NYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQ 532
            K ++IG++ VGK+ + + F    Q LF      T GVD + K V V  +   ++I  +D AG+E F +I Q  +     +++ +D++++ +F+    WL R     +   +P VL+GNKLDL+  R V +E    F R +   Y E SAKE + V    + L ++
Sbjct:   11 KIVLIGNAGVGKTCLVRRFT---QGLFPPGQGATIGVDFMIKTVEVDGTKIKLQI--WDTAGQERFRSITQSYYRSAHALVLTYDVSSEETFACLPAWL-REMEQHASAHVPRVLVGNKLDLADVRQVTREQAEAFARLHGLRYLETSAKEAENVERLFVELARR 169
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Match: YPT53 (Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037])

HSP 1 Score: 75.0998 bits (183), Expect = 2.635e-17
Identity = 49/160 (30.63%), Postives = 81/160 (50.62%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDL------SMRRNVKQEDISDFCRKNDTAYFECSAKENQGV 502
            K +++G+S VGKS+I   F SD  +  ++   T G   LTK +         EI  +D AG+E F  +    + +    +VVFD+TN+ SF  A  W++ +   +    I + L+GNK+DL      +  R +K   + + C + +  YFE SAK  + +
Sbjct:   14 KVVLLGESAVGKSSIVLRFVSD--DFKESKEPTIGAAFLTKRITRDGKVIKFEI--WDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHE-KVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENI 168
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Match: YPT32 (Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178])

HSP 1 Score: 73.1738 bits (178), Expect = 1.865e-16
Identity = 48/162 (29.63%), Postives = 79/162 (48.77%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLV 526
            K ++IGDS VGKS +   F +D  N+      T GV+  T+ + V       +I  +D AG+E +  I    +      ++V+D++   S+     WL  +R   +D  + V LIGNK DL+  R V  ++  +F  +N   + E SA  +  V +A   L+
Sbjct:   15 KIVLIGDSGVGKSNLLSRFTTDEFNI--ESKSTIGVEFATRTIEVENKKIKAQI--WDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRE-NADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELI 171
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Match: YPT31 (Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833])

HSP 1 Score: 72.7886 bits (177), Expect = 2.326e-16
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYY 538
            K ++IGDS VGKS +   F  +  N+  +   T GV+  T+ + +       +I  +D AG+E +  I    +      ++V+D++   S+     WL  +R   +D  + V LIGNK DL+  R V  E+   F ++N   + E SA  ++ V +A   L+   Y
Sbjct:   15 KIVLIGDSGVGKSNLLSRFTKNEFNM--DSKSTIGVEFATRTLEIDGKRIKAQI--WDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRE-NADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIY 175
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Match: VPS21 (Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615])

HSP 1 Score: 72.0182 bits (175), Expect = 3.787e-16
Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDL---SMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTE 508
            K +++G++ VGKS+I   F S+  +  +N   T G   LT+ V + E     EI  +D AG+E F ++    + +    +VV+D+T   SF  A  W+  +    S   I + L+GNK+D+      R V +E+      +    +FE SAK  + V +
Sbjct:    9 KLVLLGEAAVGKSSIVLRFVSN--DFAENKEPTIGAAFLTQRVTINEHTVKFEI--WDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASK-DIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVND 162
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Match: YPT1 (Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856])

HSP 1 Score: 71.633 bits (174), Expect = 4.393e-16
Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQ 532
            K L+IG+S VGKS +   F  D      +Y  T GVD   K V +     +V++  +D AG+E F  I    +     +I+V+D+T+  SF+    WL  +    +   +  +L+GNK DL  +R V+ +   +F   N   + E SA ++  V +A + + +Q
Sbjct:   10 KLLLIGNSGVGKSCLLLRFSDD--TYTNDYISTIGVDFKIKTVELDGK--TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLK-LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Match: EDO36989 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SH53])

HSP 1 Score: 171.014 bits (432), Expect = 3.293e-54
Identity = 81/178 (45.51%), Postives = 115/178 (64.61%), Query Frame = 2 
Query:   29 IIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSL-RSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCL 559
            ++R K L+ GDS VGKS + Q+F SDG +  KNY+ T G ++L KLV +PE+  SVE+  YD AGKE F + VQ+ W+HP +VIV +D++N+ SF+   KWL+R RSL +SD  +P  LI  K DL  RR +  +   D+    +  YFECSAKE++ V      L K+++ LYK+ L
Sbjct:    3 VLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETTDSVELFLYDSAGKEMFSDTVQQYWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQRRVISTKQGKDYANSKNLEYFECSAKEHENVEAPFYFLAKEFHRLYKEKL 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Match: EDO48072 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK04])

HSP 1 Score: 87.4261 bits (215), Expect = 5.577e-22
Identity = 55/162 (33.95%), Postives = 89/162 (54.94%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKW---LDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKND-TAYFECSAKENQGVTEAV 514
            K LI+GD+TVGK++  Q +     N  + Y  T GVD   K++P  + + +V +  +D AG+E F ++ +  +      +++FDLT+  +F++ +KW   LD    L +   IP +L+GNK DLS  R V +E I   CR +    + E S KE   V+E +
Sbjct:    7 KVLIVGDATVGKTSFVQRYVHG--NTRREYKPTIGVDFALKVIPWAQ-DATVRLQLWDIAGQERFTSMTRVYYKGAAACVIMFDLTSQQTFNSTIKWKNDLDSKCKLPNGKPIPCILVGNKSDLSA-RPVPKETIDKLCRDHSFLGWTEMSVKEEVNVSETM 164
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Match: EDO36687 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHU3])

HSP 1 Score: 87.8113 bits (216), Expect = 1.412e-21
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S   + ++LIGNK DL  RR+VK+E+   F R++   + E SAK    V EA I+  K+ Y   ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSSSNMVIMLIGNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Match: EDO43129 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZN1])

HSP 1 Score: 82.0333 bits (201), Expect = 1.463e-19
Identity = 53/163 (32.52%), Postives = 85/163 (52.15%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVK 529
            K L+IGDS VGKS +   F  D     ++Y  T GVD   K + V      ++I  +D AG+E F  I    +     V++V+D+T   S++   KWL  V +  S+  + ++L+GNK+DL   R V+ +   ++   +D  + E SAK  + V EA + L +
Sbjct:   18 KILLIGDSGVGKSCLLLRFVDDSHR--ESYQTTIGVDFKIKTMRVDGKVVKLQI--WDTAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASE-GVHMILVGNKIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSR 175
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Match: EDO36757 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHS5])

HSP 1 Score: 81.6481 bits (200), Expect = 3.747e-19
Identity = 57/176 (32.39%), Postives = 93/176 (52.84%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRS---LRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTA-YFECSAKENQGVTEAVIHLVK 529
            M  VK    K L+IG+  VGK++I + + ++G     NY +T GVD   K++   E    + +  +D AG E F ++ +  + +    I+VFDL+   +F   LKW   V     L ++  IPV+++ NK DL     V +E +  FC+ N  A +F  SAKE+  + +A+  LV+
Sbjct:    9 MGEVKEHLYKVLVIGEYGVGKTSIIRRY-TEGY-FSPNYKLTIGVDFALKIIHWDEKT-KINLQLWDVAGHERFGHMTRVYYKYAIAAIIVFDLSRSATFDAILKWYRDVNQKVMLTNENPIPVIILANKCDLE-DYPVDEEKLDQFCQNNGFAGWFATSAKEDYNIDDAMRFLVQ 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Match: ift27 (intraflagellar transport 27 [Source:NCBI gene;Acc:101174002])

HSP 1 Score: 149.443 bits (376), Expect = 1.792e-45
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK-DCL 559
            +R KCL++GD+ VGKS+   L CSDG    KNYSMTTGV+++ K + +PE+  SVE   +D AGKE   +  +K W  P +  +VFDLTN+ SF    +WL+R+R      ++P VL+GNK DLS RR V+     ++ +     Y E SAKE       ++ L + YY LY+ DC+
Sbjct:    3 LRAKCLLVGDAAVGKSS---LICSDGT--LKNYSMTTGVELVVKCINIPETPHSVEFYIFDSAGKEALVDACEKLWGEPSLFCLVFDLTNEQSFVNCGRWLERIRRHCRGFRVPGVLLGNKSDLSGRREVQASVAKEWAQSQGLEYHETSAKEMDSSDAPLLSLARAYYSLYQEDCV 174
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Match: ift27 (intraflagellar transport 27 [Source:NCBI gene;Acc:101174002])

HSP 1 Score: 149.443 bits (376), Expect = 1.792e-45
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = 2 
Query:   32 IRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYK-DCL 559
            +R KCL++GD+ VGKS+   L CSDG    KNYSMTTGV+++ K + +PE+  SVE   +D AGKE   +  +K W  P +  +VFDLTN+ SF    +WL+R+R      ++P VL+GNK DLS RR V+     ++ +     Y E SAKE       ++ L + YY LY+ DC+
Sbjct:    3 LRAKCLLVGDAAVGKSS---LICSDGT--LKNYSMTTGVELVVKCINIPETPHSVEFYIFDSAGKEALVDACEKLWGEPSLFCLVFDLTNEQSFVNCGRWLERIRRHCRGFRVPGVLLGNKSDLSGRREVQASVAKEWAQSQGLEYHETSAKEMDSSDAPLLSLARAYYSLYQEDCV 174
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Match: rab2a (RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:101175108])

HSP 1 Score: 88.9669 bits (219), Expect = 1.288e-21
Identity = 53/178 (29.78%), Postives = 94/178 (52.81%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S+  + ++LIGNK DL  RR VK+E+   F R++   + E SAK    V EA I+  K+ Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQIKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ-HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Match: RAB39B (ras-related protein Rab-39B [Source:NCBI gene;Acc:101174040])

HSP 1 Score: 88.5817 bits (218), Expect = 2.002e-21
Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            M T+ + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF     WL+  RS      I  +L+G+K DL  +R V Q +           Y E SA++   V +A + L +  ++L ++
Sbjct:    1 METIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEARSHVQPHSIVFLLVGHKCDLEAQRQVTQHEAEKLAGAYGMRYVETSARDAINVEKAFVDLTRDIFELVRN 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Match: RAB39B (ras-related protein Rab-39B [Source:NCBI gene;Acc:101174040])

HSP 1 Score: 88.5817 bits (218), Expect = 2.002e-21
Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYS-MTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKD 553
            M T+ + + + ++IGDSTVGKS + + F    +  F   S  T GVD  ++LV + E    +++  +D AG+E F +I +  + +    +++FD+TN  SF     WL+  RS      I  +L+G+K DL  +R V Q +           Y E SA++   V +A + L +  ++L ++
Sbjct:    1 METIWLYQFRLIVIGDSTVGKSCLIRRFT---EGRFAQVSDPTVGVDFFSRLVEI-EPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEARSHVQPHSIVFLLVGHKCDLEAQRQVTQHEAEKLAGAYGMRYVETSARDAINVEKAFVDLTRDIFELVRN 177
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Match: SMESG000053198.1 (SMESG000053198.1)

HSP 1 Score: 390.193 bits (1001), Expect = 1.587e-140
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 2 
Query:   11 MMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            MMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAV+HLVKQYYDLYKDCLNEFQNF
Sbjct:    1 MMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVMHLVKQYYDLYKDCLNEFQNF 189
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Match: SMESG000053198.1 (SMESG000053198.1)

HSP 1 Score: 387.882 bits (995), Expect = 1.712e-139
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 2 
Query:   14 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF 577
            MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAV+HLVKQYYDLYKDCLNEFQNF
Sbjct:    1 MSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVMHLVKQYYDLYKDCLNEFQNF 188
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Match: SMESG000076159.1 (SMESG000076159.1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.079e-21
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQN 574
            K +IIGD+ VGKS +   F    +     + +T GV+   +++ +      ++I  +D AG+E F +I +  +      ++V+D+T   +F+    WL+  R   S   + ++LIGNK DL  RR+VK+E+   F R++   + E SAK    V EA I+  K  Y+  ++ + +  N
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTD--KRFQPVHDLTIGVEFGARMITIDGKQVKLQI--WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ-HSSSNMVIMLIGNKSDLEARRDVKREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKAIYEKIQEGVLDINN 180
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Match: SMESG000076068.1 (SMESG000076068.1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.556e-21
Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQ 571
            K +I+GD  VGKS++   F  D  N  ++Y  T GVD   + + + ES   ++I  +D AG E + ++    +     +I+V++L +  +F     W+  V +  + ++   +L+GNKLDLS +R V  E   +F  +N+  + E SAK ++ V EA   LV     L  +  +++Q
Sbjct:   12 KIIIVGDPGVGKSSLLARFADDTFN--ESYIQTLGVDFKLRTIKINESKVKIQI--WDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV-NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQ 183
[Close]
BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Match: SMESG000024495.1 (SMESG000024495.1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.058e-21
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 2 
Query:   41 KCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILTKLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVSFSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKNDTAYFECSAKENQGVTEAVIHLVKQYY 538
            K +IIGD  VGKS +   F         +   T GV+  TK++ V  S   V++  +D AG+E F  + +  +      I+V+D+T   +F+    WL   RSL S   +  +LIGNK DL+  R V  ED  +   +N   + ECSA+  + V +A I   ++ Y
Sbjct:   11 KYIIIGDMGVGKSCLLHQFTES--KFLPDCPHTIGVEFGTKIIEV--SGEKVKLQIWDTAGQERFRAVTRSYYRGAAGAILVYDITRKATFNRVHSWLSDARSLTSPQTV-FILIGNKGDLNENREVSFEDGKELAEENGMFFLECSARTGEHVEDAFIETARKIY 171
The following BLAST results are available for this feature:
BLAST of Intraflagellar transport protein 27-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
IFT275.450e-4539.78intraflagellar transport 27 [Source:HGNC Symbol;Ac... [more]
IFT277.607e-4339.78intraflagellar transport 27 [Source:HGNC Symbol;Ac... [more]
IFT279.766e-3645.16intraflagellar transport 27 [Source:HGNC Symbol;Ac... [more]
IFT274.681e-3140.94intraflagellar transport 27 [Source:HGNC Symbol;Ac... [more]
IFT276.628e-3042.11intraflagellar transport 27 [Source:HGNC Symbol;Ac... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
unc-1081.617e-2131.93pep chromosome:WBcel235:I:3824947:3826514:1 gene:W... [more]
unc-1082.629e-2131.93pep chromosome:WBcel235:I:3822883:3826514:1 gene:W... [more]
rab-143.331e-2029.82RAB family [Source:UniProtKB/TrEMBL;Acc:Q93874][more]
rab-143.331e-2029.82RAB family [Source:UniProtKB/TrEMBL;Acc:Q93874][more]
rab-79.404e-2029.53RAB family [Source:UniProtKB/TrEMBL;Acc:Q23146][more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rab21.451e-2129.21gene:FBgn0014009 transcript:FBtr0336658[more]
Rab21.451e-2129.21gene:FBgn0014009 transcript:FBtr0086124[more]
Rab357.335e-2135.33gene:FBgn0031090 transcript:FBtr0333549[more]
Rab357.335e-2135.33gene:FBgn0031090 transcript:FBtr0303258[more]
Rab357.335e-2135.33gene:FBgn0031090 transcript:FBtr0070028[more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ift273.706e-4640.23intraflagellar transport 27 homolog (Chlamydomonas... [more]
rab39ba1.698e-2130.00RAB39B, member RAS oncogene family a [Source:ZFIN;... [more]
rab2a1.753e-2129.78RAB2A, member RAS oncogene family [Source:ZFIN;Acc... [more]
cracr2ab2.100e-2131.29calcium release activated channel regulator 2Ab [S... [more]
rab39bb2.783e-2129.83RAB39B, member RAS oncogene family b [Source:ZFIN;... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ift278.011e-5141.76intraflagellar transport 27 [Source:NCBI gene;Acc:... [more]
ift279.204e-5141.76intraflagellar transport 27 [Source:NCBI gene;Acc:... [more]
hus11.245e-2030.34HUS1 checkpoint clamp component [Source:Xenbase;Ac... [more]
RAB2A1.372e-2029.21RAB2A, member RAS oncogene family [Source:NCBI gen... [more]
nr6a14.079e-2028.89nuclear receptor subfamily 6 group A member 1 [Sou... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ift275.912e-4640.98intraflagellar transport 27 [Source:MGI Symbol;Acc... [more]
Ift275.346e-3841.10intraflagellar transport 27 [Source:MGI Symbol;Acc... [more]
Ift272.611e-2947.47intraflagellar transport 27 [Source:MGI Symbol;Acc... [more]
Rab291.737e-2132.74RAB29, member RAS oncogene family [Source:MGI Symb... [more]
Rab291.737e-2132.74RAB29, member RAS oncogene family [Source:MGI Symb... [more]
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BLAST of Intraflagellar transport protein 27-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q0VCN3|IFT27_BOVIN2.622e-4641.11Intraflagellar transport protein 27 homolog OS=Bos... [more]
sp|Q9D0P8|IFT27_MOUSE4.135e-4540.98Intraflagellar transport protein 27 homolog OS=Mus... [more]
sp|Q9BW83|IFT27_HUMAN2.617e-4439.78Intraflagellar transport protein 27 homolog OS=Hom... [more]
sp|A8HN58|IFT27_CHLRE9.295e-2828.22Intraflagellar transport protein 27 OS=Chlamydomon... [more]
sp|Q580S0|IFT27_TRYB27.228e-2530.00Intraflagellar transport protein 27 homolog OS=Try... [more]
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BLAST of Intraflagellar transport protein 27-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PN191.597e-6048.33Intraflagellar transport protein 27-like OS=Mizuho... [more]
A0A1S3HED63.040e-5947.54intraflagellar transport protein 27 homolog OS=Lin... [more]
R7TKS82.211e-5748.35Uncharacterized protein OS=Capitella teleta OX=283... [more]
R7T6X34.052e-5750.00Uncharacterized protein (Fragment) OS=Capitella te... [more]
A0A2C9LP306.874e-5749.44Uncharacterized protein OS=Biomphalaria glabrata O... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ift278.956e-5141.95intraflagellar transport 27 [Source:NCBI gene;Acc:... [more]
rab2a1.366e-2129.78RAB2A, member RAS oncogene family [Source:NCBI gen... [more]
rab39ba3.630e-2130.00ras-related protein Rab-39B [Source:NCBI gene;Acc:... [more]
ENSAMXT00000003791.21.406e-2029.44ras-related protein Rab-39B-like [Source:NCBI gene... [more]
rab142.004e-1929.24ras-related protein Rab-14 [Source:NCBI gene;Acc:1... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ift271.225e-5147.06intraflagellar transport 27 homolog (Chlamydomonas... [more]
rab2a2.712e-2229.78RAB2A, member RAS oncogene family [Source:ZFIN;Acc... [more]
RAB2B5.799e-2231.33RAB2B, member RAS oncogene family [Source:HGNC Sym... [more]
RAB2B3.116e-2129.21RAB2B, member RAS oncogene family [Source:HGNC Sym... [more]
rab303.521e-2131.52RAB30, member RAS oncogene family [Source:ZFIN;Acc... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
YPT532.635e-1730.63Stress-induced Rab family GTPase; required for vac... [more]
YPT321.865e-1629.63Rab family GTPase involved in the exocytic pathway... [more]
YPT312.326e-1628.92Rab family GTPase; involved in the exocytic pathwa... [more]
VPS213.787e-1629.56Endosomal Rab family GTPase; required for endocyti... [more]
YPT14.393e-1629.88Rab family GTPase; involved in the ER-to-Golgi ste... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO369893.293e-5445.51Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO480725.577e-2233.95Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO366871.412e-2129.78Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO431291.463e-1932.52Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO367573.747e-1932.39Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ift271.792e-4542.37intraflagellar transport 27 [Source:NCBI gene;Acc:... [more]
ift271.792e-4542.37intraflagellar transport 27 [Source:NCBI gene;Acc:... [more]
rab2a1.288e-2129.78RAB2A, member RAS oncogene family [Source:NCBI gen... [more]
RAB39B2.002e-2129.83ras-related protein Rab-39B [Source:NCBI gene;Acc:... [more]
RAB39B2.002e-2129.83ras-related protein Rab-39B [Source:NCBI gene;Acc:... [more]
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BLAST of Intraflagellar transport protein 27-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000053198.11.587e-14099.47SMESG000053198.1[more]
SMESG000053198.11.712e-13999.47SMESG000053198.1[more]
SMESG000076159.11.079e-2129.78SMESG000076159.1[more]
SMESG000076068.12.556e-2129.94SMESG000076068.1[more]
SMESG000024495.16.058e-2132.53SMESG000024495.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30005722 ID=SMED30005722|Name=Intraflagellar transport protein 27-like|organism=Schmidtea mediterranea sexual|type=transcript|length=623bp
TTAAATTCAAATGATGTCAACTGTCAAAATAATTAGAGGAAAATGTTTAA
TAATTGGAGATTCAACGGTTGGTAAAAGCACGATAACTCAGTTGTTTTGT
AGTGATGGACAGAATTTGTTTAAGAATTATTCTATGACAACCGGCGTAGA
TATTTTAACAAAATTAGTGCCAGTTCCTGAATCAAATTTCTCTGTGGAAA
TAGTATTTTATGATTGTGCTGGCAAAGAATGTTTTTACAACATTGTACAG
AAAACTTGGGATCATCCTGGAATGGTAATTGTCGTGTTCGATCTGACGAA
TGATGTTTCATTTTCGACCGCTTTGAAGTGGCTGGATAGAGTGAGAAGTT
TAAGGTCGGATATTAAAATTCCAGTCGTTTTGATTGGCAACAAATTGGAT
TTGTCTATGAGACGAAATGTAAAACAAGAAGATATTTCAGATTTCTGTCG
AAAAAATGATACCGCATATTTTGAATGCTCTGCTAAAGAAAATCAGGGAG
TCACAGAGGCTGTCATACACCTAGTGAAGCAATATTATGATTTATATAAG
GATTGTTTAAATGAATTTCAAAATTTCTGAAAGCATTCATGTAAAAATCT
TTGTGGATTAATTTTGATTATCT
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protein sequence of SMED30005722-orf-1

>SMED30005722-orf-1 ID=SMED30005722-orf-1|Name=SMED30005722-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=190bp
MMSTVKIIRGKCLIIGDSTVGKSTITQLFCSDGQNLFKNYSMTTGVDILT
KLVPVPESNFSVEIVFYDCAGKECFYNIVQKTWDHPGMVIVVFDLTNDVS
FSTALKWLDRVRSLRSDIKIPVVLIGNKLDLSMRRNVKQEDISDFCRKND
TAYFECSAKENQGVTEAVIHLVKQYYDLYKDCLNEFQNF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: biological process
TermDefinition
GO:0007165signal transduction
GO:0007264small GTPase mediated signal transduction
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0005622intracellular
GO:0031514motile cilium
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras-type
IPR001806Small_GTPase
IPR027417P-loop_NTPase
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 35..51
score: 21.02
coord: 55..77
score: 23.38
coord: 118..131
score: 48.15
coord: 153..175
score: 32.87
coord: 10..31
score: 38.98
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..178
e-value: 9.3E-10
score: 23.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 12..174
e-value: 2.0E-5
score: -48.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 11..178
e-value: 1.1E-12
score: 48.7
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 3..188
e-value: 1.2E-45
score: 157.1
NoneNo IPR availablePANTHERPTHR24070:SF414GTP-BINDING PROTEIN RAY-LIKE ISOFORM 2-RELATEDcoord: 8..188
NoneNo IPR availablePROSITEPS51419RABcoord: 4..189
score: 18.673
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 3.8E-16
score: 57.3
IPR001806Small GTPasePFAMPF00071Rascoord: 11..175
e-value: 1.4E-34
score: 119.1
IPR020849Small GTPase superfamily, Ras-typePANTHERPTHR24070FAMILY NOT NAMEDcoord: 8..188
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..180