Chromobox homolog 3a (HP1 gamma homolog, Drosophila)

Overview


Name	Chromobox homolog 3a (HP1 gamma homolog, Drosophila)
Smed ID	SMED30005626
Length (bp)	3578

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) (SMED30005626) t-SNE clustered cells

Violin plots show distribution of expression levels for Chromobox homolog 3a (HP1 gamma homolog, Drosophila) (SMED30005626) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) (SMED30005626) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30005626

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
epidermis	SMED30005626	SMESG000039690.1	dd_Smed_v4_8960_0_1	dd_Smed_v4	PMID:27063937 Scimone et al., 2016
neoblast	SMED30005626	SMESG000039690.1	dd_Smed_v4_12608_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30005626	SMESG000039690.1	dd_Smed_v4_8960_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30005626	SMESG000039690.1	dd_Smed_v4_8960_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30005626	SMESG000039690.1	dd_Smed_v4_8960_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
Match: CBX3 (chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553])

HSP 1 Score: 132.109 bits (331), Expect = 1.571e-34
Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 1.340e-11
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 1.340e-11
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 118.242 bits (295), Expect = 9.443e-30
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 7.689e-7
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 118.242 bits (295), Expect = 1.097e-29
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 9.320e-7
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 118.242 bits (295), Expect = 1.097e-29
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 9.320e-7
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Match: hpl-1 (HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog [Source:UniProtKB/TrEMBL;Acc:G5EET5])

HSP 1 Score: 73.9442 bits (180), Expect = 1.062e-14
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP-VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHL 2093
            +F+VEK+L  ++  G  ++++KW+GFP+SE +WEP ENL+C  +I+E+  E  +    ++R     + S + E  P    +     +K            I+       +L FL K+ + D  +L+  R AN+  P  VI FYE+ L
Sbjct:   36 VFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKRTTRKRRYSPQPSTSSSAELQPSTSDEWAGKTLK-----------TIIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKFYETRL 170

HSP 2 Score: 60.077 bits (144), Expect = 5.936e-10
Identity = 28/82 (34.15%), Postives = 51/82 (62.20%), Query Frame = 3

Query:  501 SEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEK--MRDVEISPEKITLVSTTAESDIQ 740
            S  +F VEK+L+ ++  G   +++KW+GFP+SE SWEP +N++ + M+ E+ +   K   R    SP+     ST++ +++Q
Sbjct:   33 SSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKRTTRKRRYSPQP----STSSSAELQ 110

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Match: hpl-2 (Chromo-domain protein; HP1 Like (Heterochromatin protein) [Source:UniProtKB/TrEMBL;Acc:G5EFS9])

HSP 1 Score: 73.1738 bits (178), Expect = 1.480e-14
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVR-KFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVE--VQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLN 2096
            +FMVEK+L  +     R +F ++W+GFP+S+++WEP ENL+C E++ EF  E  + +   +++     +    +  P E   + KE     K     ++  CI+       +L FL K+ + D A L+ A+  N   P  VI +YES L 
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQKPEPSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGPGELHFLCKFSD-DTARLLPAKEVNSRYPSQVIRYYESKLT 166

HSP 2 Score: 53.1434 bits (126), Expect = 1.368e-7
Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 3

Query:  510 IFYVEKILDMKI-ENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEK 671
            +F VEK+LD +  + G+  F ++W+GFP+S++SWEP +N++   M+ EF +   K
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSK 72

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Match: hpl-2 (Chromo-domain protein; HP1 Like (Heterochromatin protein) [Source:UniProtKB/TrEMBL;Acc:G5EFS9])

HSP 1 Score: 60.4622 bits (145), Expect = 2.100e-9
Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVR-KFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVE--VQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRAN 2048
            +FMVEK+L  +     R +F ++W+GFP+S+++WEP ENL+C E++ EF  E  + +   +++     +    +  P E   + KE     K     ++  CI+       +L FL K+ + D A L+ A+  N
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQKPEPSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGPGELHFLCKFSD-DTARLLPAKEVN 150

HSP 2 Score: 53.5286 bits (127), Expect = 4.567e-7
Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 3

Query:  510 IFYVEKILDMKI-ENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEK 671
            +F VEK+LD +  + G+  F ++W+GFP+S++SWEP +N++   M+ EF +   K
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSK 72

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Match: hpl-2 (Chromo-domain protein; HP1 Like (Heterochromatin protein) [Source:UniProtKB/TrEMBL;Acc:G5EFS9])

HSP 1 Score: 60.4622 bits (145), Expect = 2.175e-9
Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVR-KFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVE--VQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRAN 2048
            +FMVEK+L  +     R +F ++W+GFP+S+++WEP ENL+C E++ EF  E  + +   +++     +    +  P E   + KE     K     ++  CI+       +L FL K+ + D A L+ A+  N
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQKPEPSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGPGELHFLCKFSD-DTARLLPAKEVN 150

HSP 2 Score: 53.1434 bits (126), Expect = 4.924e-7
Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 3

Query:  510 IFYVEKILDMKI-ENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEK 671
            +F VEK+LD +  + G+  F ++W+GFP+S++SWEP +N++   M+ EF +   K
Sbjct:   18 VFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSK 72

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Match: cec-1 (Chromo domain-containing protein cec-1 [Source:UniProtKB/Swiss-Prot;Acc:P34618])

HSP 1 Score: 51.9878 bits (123), Expect = 1.347e-6
Identity = 20/53 (37.74%), Postives = 34/53 (64.15%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQ 1811
            E++ VE IL+ +   G  +F++KW G+  + N+WEP+EN+  P LI+ F   +
Sbjct:    6 ELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTRE 58

HSP 2 Score: 51.6026 bits (122), Expect = 1.873e-6
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEK 701
            E++ VE IL+ + + GK  F++KW G+  + NSWEP++NI    ++  F    E  R  EI  +K
Sbjct:    6 ELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTR-EAARKAEIKAKK 69

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Match: HP1b (gene:FBgn0030082 transcript:FBtr0071284)

HSP 1 Score: 110.923 bits (276), Expect = 8.772e-27
Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF---LAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            F VE++   + +NG  +++LKW+G+P SENTWEP ENL+CP+LI  F   L   ++    R     +     +  +  +E   +E   K  GF R  E   IL A   +  LMFL+KWK  D A+LV A+ AN  CPQ VI FYE  L W
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQK-KLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERLTW 152

HSP 2 Score: 51.9878 bits (123), Expect = 9.569e-7
Identity = 19/51 (37.25%), Postives = 36/51 (70.59%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            F VE++ D +  NG+  ++LKW+G+P SEN+WEP +N++   ++  F +++
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Match: HP1b (gene:FBgn0030082 transcript:FBtr0309871)

HSP 1 Score: 110.923 bits (276), Expect = 8.772e-27
Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF---LAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            F VE++   + +NG  +++LKW+G+P SENTWEP ENL+CP+LI  F   L   ++    R     +     +  +  +E   +E   K  GF R  E   IL A   +  LMFL+KWK  D A+LV A+ AN  CPQ VI FYE  L W
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQK-KLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERLTW 152

HSP 2 Score: 51.9878 bits (123), Expect = 9.569e-7
Identity = 19/51 (37.25%), Postives = 36/51 (70.59%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            F VE++ D +  NG+  ++LKW+G+P SEN+WEP +N++   ++  F +++
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Match: HP1b (gene:FBgn0030082 transcript:FBtr0301805)

HSP 1 Score: 110.923 bits (276), Expect = 8.772e-27
Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF---LAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            F VE++   + +NG  +++LKW+G+P SENTWEP ENL+CP+LI  F   L   ++    R     +     +  +  +E   +E   K  GF R  E   IL A   +  LMFL+KWK  D A+LV A+ AN  CPQ VI FYE  L W
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQK-KLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERLTW 152

HSP 2 Score: 51.9878 bits (123), Expect = 9.569e-7
Identity = 19/51 (37.25%), Postives = 36/51 (70.59%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            F VE++ D +  NG+  ++LKW+G+P SEN+WEP +N++   ++  F +++
Sbjct:    4 FSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Match: Su(var)205 (gene:FBgn0003607 transcript:FBtr0079635)

HSP 1 Score: 92.4337 bits (228), Expect = 1.064e-20
Identity = 55/180 (30.56%), Postives = 93/180 (51.67%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXX----------PVEVQIKEPVIKPKG---------------------FPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            + VEKI+  ++  G  +++LKW+G+P++ENTWEPE NL+C +LI+++ A ++  + +   K+   + S   +E             + + +EP   P G                     F R  E + IL A   N +L FL+++K VD A +V +  AN + P+ VI FYE  L+W++
Sbjct:   24 YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTA-PSGNKSKRTTDAEQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYS 202

HSP 2 Score: 58.9214 bits (141), Expect = 2.916e-9
Identity = 19/47 (40.43%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEF 653
            + VEKI+D ++  GK  ++LKW+G+P++EN+WEPE N++   ++ ++
Sbjct:   24 YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQY 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Match: Su(var)205 (gene:FBgn0003607 transcript:FBtr0079636)

HSP 1 Score: 92.4337 bits (228), Expect = 1.064e-20
Identity = 55/180 (30.56%), Postives = 93/180 (51.67%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXX----------PVEVQIKEPVIKPKG---------------------FPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            + VEKI+  ++  G  +++LKW+G+P++ENTWEPE NL+C +LI+++ A ++  + +   K+   + S   +E             + + +EP   P G                     F R  E + IL A   N +L FL+++K VD A +V +  AN + P+ VI FYE  L+W++
Sbjct:   24 YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTA-PSGNKSKRTTDAEQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYS 202

HSP 2 Score: 58.9214 bits (141), Expect = 2.916e-9
Identity = 19/47 (40.43%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEF 653
            + VEKI+D ++  GK  ++LKW+G+P++EN+WEPE N++   ++ ++
Sbjct:   24 YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQY 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
Match: cbx3a (chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158])

HSP 1 Score: 142.51 bits (358), Expect = 2.042e-38
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 3

Query: 1629 GNLPQTVQEI--FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            G   + VQEI  F+VEK++  +++NG  +FFLKW+GF D++NTWEPEENL+CPELI  FL  Q+      +  +  S+      E     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W + 
Sbjct:    7 GKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFLESQKGVVEKPEAVKRKSSTDEPETEESKAKRKKEMSDKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQIVIAFYEERLTWHSC 168

HSP 2 Score: 70.0922 bits (170), Expect = 3.409e-13
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            K   K KK V   E F VEK++D ++ NGK  FFLKW+GF D++N+WEPE+N++   ++  FL   E  + V   PE +   S+T E + +
Sbjct:    4 KQAGKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFL---ESQKGVVEKPEAVKRKSSTDEPETE 91

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
Match: cbx3a (chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158])

HSP 1 Score: 142.51 bits (358), Expect = 2.512e-38
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 3

Query: 1629 GNLPQTVQEI--FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            G   + VQEI  F+VEK++  +++NG  +FFLKW+GF D++NTWEPEENL+CPELI  FL  Q+      +  +  S+      E     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W + 
Sbjct:   10 GKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFLESQKGVVEKPEAVKRKSSTDEPETEESKAKRKKEMSDKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQIVIAFYEERLTWHSC 171

HSP 2 Score: 70.0922 bits (170), Expect = 3.509e-13
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            K   K KK V   E F VEK++D ++ NGK  FFLKW+GF D++N+WEPE+N++   ++  FL   E  + V   PE +   S+T E + +
Sbjct:    7 KQAGKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFL---ESQKGVVEKPEAVKRKSSTDEPETE 94

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
Match: cbx1b (chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68])

HSP 1 Score: 122.094 bits (305), Expect = 6.050e-31
Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            L  +++ G  ++ LKW+GF D +NTWEP+ENL+CP+LI EFL  Q+  ++  KR+  +  D    ++   E +      K +GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W +
Sbjct:   54 LDRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQSQKTAESGGKRRAETDGDGKETKKRKDEPE------KLRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 190

HSP 2 Score: 51.6026 bits (122), Expect = 1.031e-6
Identity = 19/44 (43.18%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEP++N++   ++ EFLQ+
Sbjct:   54 LDRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQS 97

[Close]

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            L  +++ G  ++ LKW+GF D +NTWEP+ENL+CP+LI EFL  Q+  ++  KR+  +  D    ++   E +      K +GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W +
Sbjct:   54 LDRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQSQKTAESGGKRRAETDGDGKETKKRKDEPE------KLRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 190

HSP 2 Score: 51.6026 bits (122), Expect = 1.031e-6
Identity = 19/44 (43.18%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEP++N++   ++ EFLQ+
Sbjct:   54 LDRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQS 97

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
Match: cbx1a (chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945])

HSP 1 Score: 120.553 bits (301), Expect = 2.871e-30
Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVE-VQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            L  +++ G  ++ LKW+GF + +NTWEPE+NL+CP+LI E++ + + N + ++                    + K+   KP+GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W +
Sbjct:   56 LDRRVVKGRVEYLLKWKGFSEEDNTWEPEDNLDCPDLIAEYMTKHKINDDKKESSAKRKESDTDGGGEDSRPKKRKDEQDKPRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 199

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Match: stab2 (stabilin 2 [Source:Xenbase;Acc:XB-GENE-491156])

HSP 1 Score: 135.576 bits (340), Expect = 1.159e-35
Identity = 69/152 (45.39%), Postives = 100/152 (65.79%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            E F+VEK+L  +++NG  +++LKW+GF DS+NTWEPEENL+CPELI+ FL  Q+  K      +  S      E+     + +E V KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W + 
Sbjct:   32 EEFVVEKVLDRRVVNGKVEYYLKWKGFTDSDNTWEPEENLDCPELIEAFLNSQKAGKEKPDSNKRKSVSDSESEDS-KSKKKRETVDKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVPAKEANVKCPQVVIAFYEERLTWHSC 182

HSP 2 Score: 61.2326 bits (147), Expect = 6.725e-10
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            E F VEK+LD ++ NGK  ++LKW+GF DS+N+WEPE+N++   ++  FL
Sbjct:   32 EEFVVEKVLDRRVVNGKVEYYLKWKGFTDSDNTWEPEENLDCPELIEAFL 81

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Match: zbtb11 (zinc finger and BTB domain containing 11 [Source:Xenbase;Acc:XB-GENE-988913])

HSP 1 Score: 128.257 bits (321), Expect = 3.388e-33
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEV--QIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+    + K +          E        + K+ V KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDDDNTWEPEENLDCPDLIAEFLQSQKSAYESEKTEAGKRKADSDTEVGEESKPKKKKDEVEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 169

HSP 2 Score: 53.1434 bits (126), Expect = 3.232e-7
Identity = 27/76 (35.53%), Postives = 42/76 (55.26%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQFLNNSK 758
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+ +         EK       A+SD +    SK
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDDDNTWEPEENLDCPDLIAEFLQSQKSA----YESEKTEAGKRKADSDTEVGEESK 98

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Match: tnfaip6 (TNF alpha induced protein 6 [Source:Xenbase;Acc:XB-GENE-988687])

HSP 1 Score: 120.553 bits (301), Expect = 2.697e-30
Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            ++VEK+L  +++ G  +F LKW+GF +  NTWEP+ NL+CPELI EF+ + ++ K    + +  S    A  +     + +E     +GF R  EP+ I+ A     +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   37 YVVEKVLDRRVVKGQVEFLLKWKGFSEEHNTWEPDRNLDCPELISEFMKKYKKVKETDPKAKTESTKRKAGSDDIKAKKRRESNDIARGFERGLEPEKIIGATDSCGELMFLMKWKDSDEADLVLAKEANVKCPQIVIAFYEERLTW 183

HSP 2 Score: 56.6102 bits (135), Expect = 2.995e-8
Identity = 20/58 (34.48%), Postives = 41/58 (70.69%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVE 686
            + VEK+LD ++  G+  F LKW+GF +  N+WEP++N++   ++ EF++  +K+++ +
Sbjct:   37 YVVEKVLDRRVVKGQVEFLLKWKGFSEEHNTWEPDRNLDCPELISEFMKKYKKVKETD 94

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Match: suv39h2 (suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:549262])

HSP 1 Score: 65.0846 bits (157), Expect = 3.423e-10
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAE 1808
            + VE +   +I  GV KFF+KW+G+P+S NTWEP  NL+CP L+K+F ++
Sbjct:   43 YEVEYLCDYRIEKGVEKFFVKWKGWPESCNTWEPTRNLKCPTLLKQFYSD 92

HSP 2 Score: 52.373 bits (124), Expect = 3.145e-6
Identity = 19/49 (38.78%), Postives = 34/49 (69.39%), Query Frame = 3

Query:  519 VEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            VE + D +IE G   FF+KW+G+P+S N+WEP +N++   ++ +F  ++
Sbjct:   45 VEYLCDYRIEKGVEKFFVKWKGWPESCNTWEPTRNLKCPTLLKQFYSDL 93

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Match: suv39h2 (suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:549262])

HSP 1 Score: 64.6994 bits (156), Expect = 5.346e-10
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAE 1808
            + VE +   +I  GV KFF+KW+G+P+S NTWEP  NL+CP L+K+F ++
Sbjct:   43 YEVEYLCDYRIEKGVEKFFVKWKGWPESCNTWEPTRNLKCPTLLKQFYSD 92

HSP 2 Score: 51.9878 bits (123), Expect = 4.700e-6
Identity = 19/49 (38.78%), Postives = 34/49 (69.39%), Query Frame = 3

Query:  519 VEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            VE + D +IE G   FF+KW+G+P+S N+WEP +N++   ++ +F  ++
Sbjct:   45 VEYLCDYRIEKGVEKFFVKWKGWPESCNTWEPTRNLKCPTLLKQFYSDL 93

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Mouse
Match: Cbx3 (chromobox 3 [Source:MGI Symbol;Acc:MGI:108515])

HSP 1 Score: 132.109 bits (331), Expect = 1.079e-34
Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 9.196e-12
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 9.196e-12
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 9.196e-12
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Mouse
Match: Cbx1 (chromobox 1 [Source:MGI Symbol;Acc:MGI:105369])

HSP 1 Score: 118.242 bits (295), Expect = 7.534e-30
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 6.398e-7
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Mouse
Match: Cbx5 (chromobox 5 [Source:MGI Symbol;Acc:MGI:109372])

HSP 1 Score: 114.005 bits (284), Expect = 2.818e-28
Identity = 59/155 (38.06%), Postives = 93/155 (60.00%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXX----XXXXXXXXXXXXXXXXPVEVQIKEPVIK----PKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            ++VEK+L  +++ G  ++ LKW+GF +  NTWEPE+NL+CPELI EF+ + ++ K       + K   +    +      +++ K+   +     +GF R  EP+ I+ A      LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   20 YVVEKVLDRRMVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPREKSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTW 174

HSP 2 Score: 57.7658 bits (138), Expect = 7.370e-9
Identity = 22/58 (37.93%), Postives = 41/58 (70.69%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVE 686
            + VEK+LD ++  G+  + LKW+GF +  N+WEPE+N++   ++ EF++  +KM++ E
Sbjct:   20 YVVEKVLDRRMVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGE 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Match: sp|P23198|CBX3_MOUSE (Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.656e-34
Identity = 70/149 (46.98%), Postives = 103/149 (69.13%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI++FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEDFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++ +FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEDFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Match: sp|Q5R6X7|CBX3_PONAB (Chromobox protein homolog 3 OS=Pongo abelii OX=9601 GN=CBX3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 7.547e-34
Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 6.433e-11
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Match: sp|Q13185|CBX3_HUMAN (Chromobox protein homolog 3 OS=Homo sapiens OX=9606 GN=CBX3 PE=1 SV=4)

HSP 1 Score: 132.109 bits (331), Expect = 7.547e-34
Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  ++FLKW+GF D++NTWEPEENL+CPELI+ FL  Q+  K     KR S +DS + +      + ++   KP+GF R  +P+ I+ A   + +LMFL+KWK+ D A+LV A+ AN++CPQ VI+FYE  L W
Sbjct:   28 EEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDS--KSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTW 174

HSP 2 Score: 66.2402 bits (160), Expect = 6.433e-11
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +NG+ KK      E F VEK+LD ++ NGK  +FLKW+GF D++N+WEPE+N++   ++  FL
Sbjct:   15 QNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Match: sp|P83917|CBX1_MOUSE (Chromobox protein homolog 1 OS=Mus musculus OX=10090 GN=Cbx1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.270e-29
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 4.476e-6
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Match: sp|P83916|CBX1_HUMAN (Chromobox protein homolog 1 OS=Homo sapiens OX=9606 GN=CBX1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.270e-29
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP---VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEPEENL+CP+LI EFL  Q+      K +          E+        + KE   KP+GF R  EP+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 170

HSP 2 Score: 51.9878 bits (123), Expect = 4.476e-6
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEPE+N++   ++ EFLQ+
Sbjct:   27 LDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQS 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Match: A0A5J6BTI0 (Polycomb group heterochromatin-associated protein HP1-like protein OS=Dugesia japonica OX=6161 GN=hp1 PE=2 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 1.168e-133
Identity = 267/428 (62.38%), Postives = 314/428 (73.36%), Query Frame = 3

Query: 1638 PQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNTDHLNFSSVPKENLADEIEEE-PKQTKSNVKKSSGNLKNSMDGLISLLDDVHDNKIIQKPVNVPRIHPKPMKTIRNPNMQTPRRGRPLTKLF----NHSLTPKKSATGSSSHSMMNLIRNFKNPR--FPSQAPKPSVSDLQSRPLPPPTPLENLSRVYDSRXXXXXXXXXXXXXXXXXXXQTTMLRPINSYRPDFNPRRFGLLSRPQTTNVPQMSQ-NIPQKISMPSITPSLSMPALKPCPNVTILPK-----NYQ--ISNYNP-ALVNNYI 2873
            P   +EIF VEKIL+MK  NG R FFLKWEGFPDSENTWEPEENLECPELIKEFL EQR+ K A+KRKRL SADSL LEELP EV IKEP +KP+GFPRSREP+ ILAAGMMNDQ+MFL+KWKNVDMANLVSARRANIECPQ VI FYE+HLNW NT HLN +SVPKENLA+ IE+E  K  K+  KK + +  ++M+ LISLLD+  +N  ++KP N  +I PKP+    N     P RGRPLTKLF    N    PK S  GSSS+SMM+LI NFK PR   P + P   V++  SRPLPPPTPLENLSRVY+SR+IPK+ +PPP         QT +LRPINSYRPDFNPRRFG+ SRP   N  Q SQ N  QKI MPS+TPS++MP LK  P + ++ +     N+Q   SNY+  + +NNYI
Sbjct:  172 PTITEEIFYVEKILEMKYENGKRLFFLKWEGFPDSENTWEPEENLECPELIKEFLKEQRKLKCAKKRKRLLSADSLNLEELPEEVIIKEPAVKPRGFPRSREPESILAAGMMNDQMMFLIKWKNVDMANLVSARRANIECPQVVIRFYENHLNWENTSHLNLTSVPKENLANPIEDEFTKINKTISKKLNADPASTMNTLISLLDNDDENIPVRKPTNFLKIKPKPV----NRKTTLPYRGRPLTKLFERKTNTETLPKTSVIGSSSNSMMDLINNFKGPRALLPHKLP---VTNTVSRPLPPPTPLENLSRVYESRDIPKEQTPPPPKFELPKPNQTQLLRPINSYRPDFNPRRFGISSRP-LLNASQHSQINSSQKIQMPSLTPSMTMPTLKAAPTLALIHQPNSLINFQSPSSNYDASSSINNYI 591

HSP 2 Score: 192.971 bits (489), Expect = 7.309e-47
Identity = 117/233 (50.21%), Postives = 159/233 (68.24%), Query Frame = 3

Query:   18 MPKRRKCKLKALPERHCKKSKLTINLRENRKSINYDEAXXXXXXXXXXKRENKQID-IDNSSNSDVVILDQLK------PSLFESMKLTFQDEPLGDINSSSVTNDTPDSNACNIIDDKISLGTELLNSSQLNRRKSKTPSLQG--SAISLSSYGSTPT----KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMR 677
            MPK+RKC+LKALPER CKK +++I+LRENRKSINY+E IEISSEDS  K E++QID ++NSSNS VVILD +K      PS FES+ ++F DE   + N+       P+    ++I+ +  +    +  ++++      P+ +G  S ISLSS  S  T    K    KK+  I+EEIFYVEKIL+MK ENGKR+FFLKWEGFPDSEN+WEPE+N+E   ++ EFL+   K++
Sbjct:    1 MPKKRKCRLKALPERQCKKPRISISLRENRKSINYNETIEISSEDSKGKHEDEQIDDVENSSNSSVVILDNVKQGENGKPSFFESINISFHDERFPEGNTDGEELQKPEEFTASVINQETPVENGEITQNKVDIEDLNIPAEKGCGSTISLSSCDSKSTTSKRKKRNSKKQPTITEEIFYVEKILEMKYENGKRLFFLKWEGFPDSENTWEPEENLECPELIKEFLKEQRKLK 233

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Match: A0A3Q1HAA8 (Chromobox homolog 3a (HP1 gamma homolog, Drosophila) OS=Acanthochromis polyacanthus OX=80966 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.660e-35
Identity = 78/184 (42.39%), Postives = 109/184 (59.24%), Query Frame = 3

Query: 1548 SDSSELSNKSNKNTNSIASKDPNLFFPGNLPQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            S + +++ K  K  N+   KD          Q   E F+VEK+L  +++NG  +FFLKW+GF D++NTWEPEENL+CPELI  FL  Q+  K      +  ++          E + K+  +KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VISFYE  L W
Sbjct:    2 STNKQMNKKMGKKQNTKTKKD------AQETQEEPEEFVVEKVLDQRLVNGKVEFFLKWKGFTDADNTWEPEENLDCPELISAFLEAQKNVKEKPAPVKRKASTDEP------ETESKKKEVKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVISFYEERLTW 173

HSP 2 Score: 64.6994 bits (156), Expect = 5.872e-8
Identity = 31/78 (39.74%), Postives = 51/78 (65.38%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            E F VEK+LD ++ NGK  FFLKW+GF D++N+WEPE+N++   ++  FL   E  ++V+  P  +   ++T E + +
Sbjct:   31 EEFVVEKVLDQRLVNGKVEFFLKWKGFTDADNTWEPEENLDCPELISAFL---EAQKNVKEKPAPVKRKASTDEPETE 105

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Match: A0A2R8PXB7 (Chromobox homolog 3a (HP1 gamma homolog, Drosophila) OS=Danio rerio OX=7955 GN=cbx3a PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.569e-35
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 3

Query: 1629 GNLPQTVQEI--FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            G   + VQEI  F+VEK++  +++NG  +FFLKW+GF D++NTWEPEENL+CPELI  FL  Q+      +  +  S+      E     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W + 
Sbjct:    7 GKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFLESQKGVVEKPEAVKRKSSTDEPETEESKAKRKKEMSDKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQIVIAFYEERLTWHSC 168

HSP 2 Score: 70.0922 bits (170), Expect = 7.628e-10
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            K   K KK V   E F VEK++D ++ NGK  FFLKW+GF D++N+WEPE+N++   ++  FL   E  + V   PE +   S+T E + +
Sbjct:    4 KQAGKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFL---ESQKGVVEKPEAVKRKSSTDEPETE 91

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Match: A0A3B5AY88 (Chromobox homolog 3a (HP1 gamma homolog, Drosophila) OS=Stegastes partitus OX=144197 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.717e-35
Identity = 78/184 (42.39%), Postives = 108/184 (58.70%), Query Frame = 3

Query: 1557 SELSNKSNKNTNSIASKDPNLFFPGNLPQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            S L +K  K  N+   KD          Q   E F+VEK+L  +++NG  +F+LKW+GF D++NTWEPEENL+CPELI  FL  Q+  K      +  ++          E + K+  +KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VISFYE  L W + 
Sbjct:    7 SYLCHKMGKKQNTKGKKD------AQETQEEPEEFVVEKVLDQRLVNGKVEFYLKWKGFTDADNTWEPEENLDCPELISAFLEAQKNVKEKPAPVKRKASTDEP------ETESKKKDVKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVISFYEERLTWHSC 178

HSP 2 Score: 64.3142 bits (155), Expect = 1.004e-7
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 3

Query:  453 GSTPTKNGRKKKKSVISE-EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            G      G+K  +    E E F VEK+LD ++ NGK  F+LKW+GF D++N+WEPE+N++   ++  FL   E  ++V+  P  +   ++T E + +
Sbjct:   14 GKKQNTKGKKDAQETQEEPEEFVVEKVLDQRLVNGKVEFYLKWKGFTDADNTWEPEENLDCPELISAFL---EAQKNVKEKPAPVKRKASTDEPETE 107

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Match: Q0P455 (Chromobox homolog 3a (HP1 gamma homolog, Drosophila) OS=Danio rerio OX=7955 GN=cbx3a PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.795e-35
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 3

Query: 1629 GNLPQTVQEI--FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNT 2108
            G   + VQEI  F+VEK++  +++NG  +FFLKW+GF D++NTWEPEENL+CPELI  FL  Q+      +  +  S+      E     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W + 
Sbjct:    7 GKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFLESQKGVVEKPEAVKRKSSTDEPGTEESKAKRKKEMSDKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQIVIAFYEERLTWHSC 168

HSP 2 Score: 70.0922 bits (170), Expect = 6.997e-10
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3

Query:  468 KNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAE 728
            K   K KK V   E F VEK++D ++ NGK  FFLKW+GF D++N+WEPE+N++   ++  FL   E  + V   PE +   S+T E
Sbjct:    4 KQAGKSKKEVQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAAFL---ESQKGVVEKPEAVKRKSSTDE 87

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
Match: cbx3a (chromobox protein homolog 3-like [Source:NCBI gene;Acc:103046426])

HSP 1 Score: 132.88 bits (333), Expect = 5.652e-35
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            +  +++NG  +FFLKW+GFPD++NTWEPEENL+CPELI  FL  Q+         +  S+      +     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W
Sbjct:   36 IDQRVVNGKVEFFLKWKGFPDTDNTWEPEENLDCPELISAFLTSQKGVVENPDSNKRKSSTDEPETDENSAKRKKELSEKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVIAFYEERLTW 176

HSP 2 Score: 56.9954 bits (136), Expect = 1.059e-8
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +D ++ NGK  FFLKW+GFPD++N+WEPE+N++   ++  FL
Sbjct:   36 IDQRVVNGKVEFFLKWKGFPDTDNTWEPEENLDCPELISAFL 77

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
Match: cbx3a (chromobox protein homolog 3-like [Source:NCBI gene;Acc:103046426])

HSP 1 Score: 132.494 bits (332), Expect = 6.699e-35
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            +  +++NG  +FFLKW+GFPD++NTWEPEENL+CPELI  FL  Q+         +  S+      +     + KE   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VI+FYE  L W
Sbjct:   29 IDQRVVNGKVEFFLKWKGFPDTDNTWEPEENLDCPELISAFLTSQKGVVENPDSNKRKSSTDEPETDENSAKRKKELSEKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVIAFYEERLTW 169

HSP 2 Score: 56.6102 bits (135), Expect = 1.205e-8
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +D ++ NGK  FFLKW+GFPD++N+WEPE+N++   ++  FL
Sbjct:   29 IDQRVVNGKVEFFLKWKGFPDTDNTWEPEENLDCPELISAFL 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
Match: cbx5 (chromobox 5 [Source:NCBI gene;Acc:103047453])

HSP 1 Score: 130.183 bits (326), Expect = 7.821e-34
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 3

Query: 1650 QEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            +E ++VEK+L  +++ G  ++FLKW+GF D  NTWEPE+NL+CP+LI EF+   +  K         S+ + +       V+ K+ ++  +GF R  EP+ I+ A      LMFL+KWK+ D A+LV A+ AN +CPQ VI+FYE  L W
Sbjct:   38 EEEYVVEKVLDRRVVKGRVEYFLKWKGFTDKHNTWEPEKNLDCPDLISEFM---KTYKKGGSSTGTPSSGAKSSSTASTAVRSKDKILVARGFERGLEPEKIIGATDSCGDLMFLMKWKDSDEADLVLAKEANHKCPQIVIAFYEERLTW 184

HSP 2 Score: 64.6994 bits (156), Expect = 3.106e-11
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 3

Query:  504 EEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            EE + VEK+LD ++  G+  +FLKW+GF D  N+WEPE+N++   ++ EF++  +K      +P      S+TA + ++
Sbjct:   38 EEEYVVEKVLDRRVVKGRVEYFLKWKGFTDKHNTWEPEKNLDCPDLISEFMKTYKKGGSSTGTPSSGAKSSSTASTAVR 116

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
Match: cbx1a (chromobox protein homolog 1-like [Source:NCBI gene;Acc:103037352])

HSP 1 Score: 122.479 bits (306), Expect = 5.369e-31
Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIK---EPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  +F LKW+GF D +NTWEPE+NL+CP+LI EF+  Q   K     K+       +  +   E + K   E   KP+GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   56 LDRRVVKGRTEFLLKWKGFTDEDNTWEPEDNLDCPDLIAEFM--QNYKKPREGEKKDGKRKGESDNDTGAEDRPKKRREEQEKPRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 197

HSP 2 Score: 56.9954 bits (136), Expect = 1.698e-8
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVE 686
            LD ++  G+  F LKW+GF D +N+WEPE N++   ++ EF+QN +K R+ E
Sbjct:   56 LDRRVVKGRTEFLLKWKGFTDEDNTWEPEDNLDCPDLIAEFMQNYKKPREGE 107

[Close]

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIK---EPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  +F LKW+GF D +NTWEPE+NL+CP+LI EF+  Q   K     K+       +  +   E + K   E   KP+GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   56 LDRRVVKGRTEFLLKWKGFTDEDNTWEPEDNLDCPDLIAEFM--QNYKKPREGEKKDGKRKGESDNDTGAEDRPKKRREEQEKPRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 197

HSP 2 Score: 56.9954 bits (136), Expect = 1.698e-8
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVE 686
            LD ++  G+  F LKW+GF D +N+WEPE N++   ++ EF+QN +K R+ E
Sbjct:   56 LDRRVVKGRTEFLLKWKGFTDEDNTWEPEDNLDCPDLIAEFMQNYKKPREGE 107

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009664.1 (pep scaffold:Pmarinus_7.0:GL477881:602658:605312:-1 gene:ENSPMAG00000008728.1 transcript:ENSPMAT00000009664.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 125.946 bits (315), Expect = 6.383e-33
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 3

Query: 1671 KILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVI---KPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            K+L  ++M G  ++ LKW+GF D ENTWEPE+NL+CPELI +FL  QR+              + + E+   +VQ K+      K KGF R  EP+ I+ A   + +LMFL+KWK  + A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   52 KVLDRRVMKGKVEYLLKWKGFTDEENTWEPEDNLDCPELINQFLERQRQACEVSAEGNNGKRKAASREDDG-DVQAKKHQADDNKTKGFVRGLEPEKIIGATDSSGELMFLMKWKGCEEADLVPAKEANLKCPQVVISFYEERLTW 196

HSP 2 Score: 53.9138 bits (128), Expect = 3.935e-8
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 3

Query:  525 KILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPE----KITLVSTTAESDIQ 740
            K+LD ++  GK  + LKW+GF D EN+WEPE N++   ++ +FL+   + +  E+S E    K    S   + D+Q
Sbjct:   52 KVLDRRVMKGKVEYLLKWKGFTDEENTWEPEDNLDCPELINQFLER--QRQACEVSAEGNNGKRKAASREDDGDVQ 125

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 121.709 bits (304), Expect = 8.033e-32
Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = 3

Query: 1647 VQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLA-----EQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
             +E ++VEK++  +++ G  ++FLKW+GF + +NTWEPEENL+CP+LI E+L      +Q     A   KR S++ +   +    + +    V +  GF R  EP+ I+ A   + +LMFL+KW   D A+LV A+ AN  CPQ VISFYE  L W
Sbjct:   17 AEEEYVVEKVMDRRVVKGKVEYFLKWKGFTEEDNTWEPEENLDCPDLISEYLGTSKGKQQVSEDKAEGTKRKSASLNGTGDNKAKKKKEAGKVGQEIGFSRGLEPERIIGATDSSGELMFLMKWYGSDEADLVPAKEANTSCPQIVISFYEERLTW 172

HSP 2 Score: 58.5362 bits (140), Expect = 7.064e-10
Identity = 22/52 (42.31%), Postives = 39/52 (75.00%), Query Frame = 3

Query:  501 SEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFL 656
            +EE + VEK++D ++  GK  +FLKW+GF + +N+WEPE+N++   ++ E+L
Sbjct:   17 AEEEYVVEKVMDRRVVKGKVEYFLKWKGFTEEDNTWEPEENLDCPDLISEYL 68

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 113.235 bits (282), Expect = 1.258e-28
Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF---------LAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF D +NTWEP+ENL+CP+LI EF         LAE++     RK   L+  +  A  +   E    E +   +GF R  +P+ I+ A   + +LMFL+KWK  D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   48 LDRRVVKGKVEYLLKWKGFGDEDNTWEPDENLDCPDLISEFLENYKNKGRLAEEKSESGKRKGSSLNGTEEAARTKKKKEETKAEQL---RGFARGLDPERIIGATDSSGELMFLMKWKGSDEADLVPAKEANVKCPQIVISFYEERLTW 194

HSP 2 Score: 51.2174 bits (121), Expect = 2.886e-7
Identity = 19/44 (43.18%), Postives = 32/44 (72.73%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQN 662
            LD ++  GK  + LKW+GF D +N+WEP++N++   ++ EFL+N
Sbjct:   48 LDRRVVKGKVEYLLKWKGFGDEDNTWEPDENLDCPDLISEFLEN 91

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 108.227 bits (269), Expect = 5.809e-27
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 3

Query: 1686 KIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXX---------PVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFN 2105
            +++ G  ++ LKW+GF   +NTWEPEENL+CPELI ++L  Q+                                 + + ++   + +GF R  EP+ I+ A   + +LMFL+KW++ D A+LV A+ AN++CPQ VISFYE  L W +
Sbjct:   31 RVVKGKVEYLLKWKGFSHDDNTWEPEENLDCPELITQYLDSQKSTPKHSGASEERGEGQKRKASSLNGSDDGRSKKKKEERKADDRIRGFTRGLEPERIIGATDSSGELMFLMKWRDSDEADLVPAKEANLKCPQVVISFYEERLTWHS 179

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Match: CBX1 (chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551])

HSP 1 Score: 98.9821 bits (245), Expect = 1.166e-23
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVI--------------------KPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E ++VEK+L  +++ G  ++ LKW+GF   +NTWEPE++L+CPELI  +L      K   +       +     E  VE   ++P +                    + +GF    E + I+ A   + +LMFL+KWK +D  +LV A+ AN++CPQ VI FYE  + W
Sbjct:   27 EEYVVEKVLDRRVVKGKVEYLLKWKGFSHGDNTWEPEDHLDCPELINHYL---DSLKLKPRDGGGFGGEVAGGSEERVEAYKRKPAVAFNGSEDGRAKKKKDDKADERIRGFAGGLEAERIVGATDCSGELMFLMKWKGLDETDLVPAKEANVKCPQVVIKFYEERVTW 192

HSP 2 Score: 49.6766 bits (117), Expect = 9.559e-7
Identity = 22/59 (37.29%), Postives = 39/59 (66.10%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVE-KMRD 680
            E + VEK+LD ++  GK  + LKW+GF   +N+WEPE +++   ++  +L +++ K RD
Sbjct:   27 EEYVVEKVLDRRVVKGKVEYLLKWKGFSHGDNTWEPEDHLDCPELINHYLDSLKLKPRD 85

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Nematostella
Match: EDO48908 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHT1])

HSP 1 Score: 62.7734 bits (151), Expect = 6.500e-11
Identity = 23/38 (60.53%), Postives = 33/38 (86.84%), Query Frame = 3

Query: 1686 KIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF 1799
            +++NG  ++ LKW+G+PDSENTWE EE L+CPELI+E+
Sbjct:   37 RVINGGIEYLLKWKGYPDSENTWESEEGLQCPELIEEY 74

HSP 2 Score: 58.9214 bits (141), Expect = 1.198e-9
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 3

Query: 1941 EPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E D IL A  ++ Q+ FL++WK+ D A+L+ ++ AN++ PQ VI FYE  + W
Sbjct:  143 EADTILGATEVDGQIHFLIQWKSTDRADLIPSKVANLKWPQIVIKFYEERVTW 195

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Nematostella
Match: EDO27150 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TA22])

HSP 1 Score: 52.7582 bits (125), Expect = 7.106e-9
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF 1799
            I+  E ILK ++ +G   +F+KW+G+    NTWEPEEN+  P L+K +
Sbjct:   10 IYAAETILKERVRDGKVWYFIKWKGYSQRYNTWEPEENVLDPRLLKAY 57

HSP 2 Score: 46.595 bits (109), Expect = 1.138e-6
Identity = 16/39 (41.03%), Postives = 27/39 (69.23%), Query Frame = 3

Query:  510 IFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNI 626
            I+  E IL  ++ +GK  +F+KW+G+    N+WEPE+N+
Sbjct:   10 IYAAETILKERVRDGKVWYFIKWKGYSQRYNTWEPEENV 48

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Nematostella
Match: EDO40283 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7R4])

HSP 1 Score: 53.5286 bits (127), Expect = 2.505e-7
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 3

Query: 1656 IFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEF 1799
            I+  E ILK ++ +G   +F+KW+G+    NTWEPEEN+  P L+K +
Sbjct:   10 IYAAETILKERVRDGKVWYFIKWKGYSQRYNTWEPEENVLDPRLLKAY 57

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Match: cbx3a (chromobox protein homolog 3 [Source:NCBI gene;Acc:100049459])

HSP 1 Score: 139.043 bits (349), Expect = 2.530e-37
Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            E F+VEK+L  +++NG  +F+LKW+GF D++NTWEPEENL+CPELI  FL  Q+  K      +  ++          E + K+   KP+GF R+ EP+ I+ A   + +LMFL+KWK+ D A+LV AR AN  CPQ VISFYE  L W
Sbjct:   21 EEFVVEKVLDQRLVNGKVEFYLKWKGFTDADNTWEPEENLDCPELISAFLESQKNIKEKPAAVKRKASTDEPE----TEPKKKDMAEKPRGFARNLEPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVISFYEERLTW 165

HSP 2 Score: 63.1586 bits (152), Expect = 5.894e-11
Identity = 29/78 (37.18%), Postives = 51/78 (65.38%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQ 740
            E F VEK+LD ++ NGK  F+LKW+GF D++N+WEPE+N++   ++  FL   E  ++++  P  +   ++T E + +
Sbjct:   21 EEFVVEKVLDQRLVNGKVEFYLKWKGFTDADNTWEPEENLDCPELISAFL---ESQKNIKEKPAAVKRKASTDEPETE 95

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Match: cbx3b (chromobox protein homolog 3 [Source:NCBI gene;Acc:101159942])

HSP 1 Score: 117.472 bits (293), Expect = 1.339e-29
Identity = 67/173 (38.73%), Postives = 90/173 (52.02%), Query Frame = 3

Query: 1647 VQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQI------------------KEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNTD 2111
            VQE F+VEKI++ ++ NG  ++FLKW+GF D+ENTWEPE+NL+CPELI+EFL          + ++         E    E +I                   E    P       EP+CI+ +     +LMFLVKWKN +   L+ AR A+  CPQ VI FYE  L W   D
Sbjct:   19 VQE-FVVEKIIRRRVFNGRVEYFLKWKGFTDAENTWEPEDNLDCPELIEEFLRNAPAFPEENEEEQSEQTLVPKEEMTEQETEIFSELASASHGDGYVLQSDDEQSDAPTDLSNYLEPECIIGSTDRKGELMFLVKWKNSEDVALLPAREASTRCPQVVIDFYEQKLTWHCGD 190

HSP 2 Score: 64.3142 bits (155), Expect = 3.912e-11
Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 3

Query:  465 TKNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNV 665
            T   RK +++    + F VEKI+  ++ NG+  +FLKW+GF D+EN+WEPE N++   ++ EFL+N 
Sbjct:    6 TAKQRKTEETTAVVQEFVVEKIIRRRVFNGRVEYFLKWKGFTDAENTWEPEDNLDCPELIEEFLRNA 72

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Match: CBX1 (chromobox protein homolog 1 [Source:NCBI gene;Acc:101170765])

HSP 1 Score: 114.005 bits (284), Expect = 1.568e-28
Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXP-VEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  +F LKW+GF + +NTWEPEENL+CP+LI E++ + +  +  +K  +  +A   + E       + KE   K +GF R  +P+ I+ A   + +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:   24 LDRRVVKGKVEFLLKWKGFSEEDNTWEPEENLDCPDLIAEYMQKHKEKEEKKKEGKRKAASEGSGEAEERGSKRKKEEGEKARGFGRGLQPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 165

HSP 2 Score: 48.9062 bits (115), Expect = 6.668e-6
Identity = 18/43 (41.86%), Postives = 31/43 (72.09%), Query Frame = 3

Query:  531 LDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQ 659
            LD ++  GK  F LKW+GF + +N+WEPE+N++   ++ E++Q
Sbjct:   24 LDRRVVKGKVEFLLKWKGFSEEDNTWEPEENLDCPDLIAEYMQ 66

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Match: CBX1 (chromobox 1 [Source:NCBI gene;Acc:101155967])

HSP 1 Score: 111.309 bits (277), Expect = 1.243e-26
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 3

Query: 1677 LKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            L  +++ G  ++ LKW+GF + +NTWEPE+NL+CP+LI EFL  Q+   + +++    +    +        + K+   K +GF R  EP+ I+ A     +LMFL+KWKN D A+LV A+ AN++CPQ VISFYE  L W
Sbjct:  115 LNRRVVKGRVEYLLKWKGFSEEDNTWEPEDNLDCPDLIAEFLQSQKAAHDGKRKAAGDAEGDDSK-----SKKKKDDTEKLRGFARGLEPERIIGATDSTGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTW 250

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Match: cbx5 (chromobox 5 [Source:NCBI gene;Acc:101174667])

HSP 1 Score: 103.219 bits (256), Expect = 1.936e-24
Identity = 59/172 (34.30%), Postives = 92/172 (53.49%), Query Frame = 3

Query: 1659 FMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFL-------------------------AEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            ++VEK+L  +++ G  +FFLKW+G+ +  NTWEPE+NL+CPELI EF+                            + + + +K+      +         + + +E ++  +GF R  EP+ I+ A      LMFL+KWK+ D A+LV A+ AN +CPQ VI+FYE  L W
Sbjct:   18 YVVEKVLDRRVVKGRVEFFLKWKGYSEKHNTWEPEKNLDCPELIAEFMKTYKKPGSGSATPSTGSSKVNTGSSGRSKESGSLKKKGSDDEEEEDEEGGSKPKKKKEEEILVARGFERGLEPEKIIGATDSCGDLMFLMKWKDSDEADLVLAKEANHKCPQIVIAFYEERLTW 189

HSP 2 Score: 56.6102 bits (135), Expect = 1.772e-8
Identity = 21/53 (39.62%), Postives = 38/53 (71.70%), Query Frame = 3

Query:  513 FYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVEK 671
            + VEK+LD ++  G+  FFLKW+G+ +  N+WEPE+N++   ++ EF++  +K
Sbjct:   18 YVVEKVLDRRVVKGRVEFFLKWKGYSEKHNTWEPEKNLDCPELIAEFMKTYKK 70

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Match: SMESG000039690.1 (SMESG000039690.1)

HSP 1 Score: 1310.05 bits (3389), Expect = 0.000e+0
Identity = 782/786 (99.49%), Postives = 785/786 (99.87%), Query Frame = 3

Query: 1170 MNEENMTNEESKINDENKANEENKSELTSQVSEIPLIVLRNXXXXXXXXXXXXXXXXXXXVNNKPAINSENKEQELIPVKPDEIFPVVSQRTRKNMKSLKEILDSSDVSDAGGHENVEFNKSDGRESDSSELSNKSNKNTNSIASKDPNLFFPGNLPQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNTDHLNFSSVPKENLADEIEEEPKQTKSNVKKSSGNLKNSMDGLISLLDDVHDNKIIQKPVNVPRIHPKPMKTIRNPNMQTPRRGRPLTKLFNHSLTPKKSATGSSSHSMMNLIRNFKNPRFPSQAPKPSVSDLQSRPLPPPTPLENLSRVYDSRXXXXXXXXXXXXXXXXXXXQTTMLRPINSYRPDFNPRRFGLLSRPQTTNVPQMSQNIPQKISMPSITPSLSMPALKPCPNVTILPKNYQISNYNPALVNNYISVDDNITLINGTIPQQSNSNPLSHYLKVVDSITSEFPVTQSPVQQIINPDQKPQLSYQNVPDSLISNFIQXXXXXXXXXXXXXXXXXXGFLNPINQMRSMAVSIDQQLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTRMQLASALQSRYQLNSAITNHHNILPSSNQVNIYPSAGVGGNNQMSLPQYQFVIQQAQNYPNQTSLI 3527
            MNEENMTNEESKINDENKANEENKSELTSQVSEIPLIVLRNKGNKKKKRKRSWKKIEKVKVNNKPAINSENKEQELIPVKPDEIFPVVSQRTRKNMKSLKEILDSSDVSDAGGHENVEFNKSDGRESDSSELSNKSNKNTNSIASKDPNLFFPGNLPQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQRRNKNARKRKRLSSADSLALEELPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNTDHLNFSSVPKENLADEIEEEPKQTKSNVKKSSGNLKNSMDGLISLLDDVHDNKIIQKPVNVPRIHPKPMKTIRNPNMQTPRRGRPLTKLFNHSLTPKKSATGSSSHSMMNLIRNFKNPRFPSQAPKPSVSDLQSRPLPPPTPLENLSRVYDSREIPKDPSPPPIFEPPKPIIQTTMLRPINSYRPDFNPRRFGLLSRPQTTNVPQMSQNIPQKISMPSITPSLSMPALKPCPNVTILPKNYQISNYNPALVNNYISVDDNITLINGTIPQQSNSNPLSHYLKVVDSITSEFPVTQSPVQQIINPDQKPQLSYQNVPDSLISNFIQSN+SNNNTNNNNNSNTNNGFLNPINQMRSMAVSIDQQLRTNQLDNANNYQQNYNNIQTANSNNNNRCNNNNNTNMSNINKTRMQLASALQSRYQLNSAITNH NILPSSNQVNIYPSAGVGGNNQ+SLPQYQFVIQQAQNYPNQT+LI
Sbjct:  432 MNEENMTNEESKINDENKANEENKSELTSQVSEIPLIVLRNKGNKKKKRKRSWKKIEKVKVNNKPAINSENKEQELIPVKPDEIFPVVSQRTRKNMKSLKEILDSSDVSDAGGHENVEFNKSDGRESDSSELSNKSNKNTNSIASKDPNLFFPGNLPQTVQEIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQRRNKNARKRKRLSSADSLALEELPVEVQIKEPVIKPKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWFNTDHLNFSSVPKENLADEIEEEPKQTKSNVKKSSGNLKNSMDGLISLLDDVHDNKIIQKPVNVPRIHPKPMKTIRNPNMQTPRRGRPLTKLFNHSLTPKKSATGSSSHSMMNLIRNFKNPRFPSQAPKPSVSDLQSRPLPPPTPLENLSRVYDSREIPKDPSPPPIFEPPKPIIQTTMLRPINSYRPDFNPRRFGLLSRPQTTNVPQMSQNIPQKISMPSITPSLSMPALKPCPNVTILPKNYQISNYNPALVNNYISVDDNITLINGTIPQQSNSNPLSHYLKVVDSITSEFPVTQSPVQQIINPDQKPQLSYQNVPDSLISNFIQSNSSNNNTNNNNNSNTNNGFLNPINQMRSMAVSIDQQLRTNQLDNANNYQQNYNNIQTANSNNNNRCNNNNNTNMSNINKTRMQLASALQSRYQLNSAITNHPNILPSSNQVNIYPSAGVGGNNQLSLPQYQFVIQQAQNYPNQTNLI 1217

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Match: SMESG000004606.1 (SMESG000004606.1)

HSP 1 Score: 128.257 bits (321), Expect = 4.381e-33
Identity = 72/173 (41.62%), Postives = 97/173 (56.07%), Query Frame = 3

Query: 1671 KILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXX------------------------XXXXXXXXXXXXPVEVQIKE--PVIKP---KGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWF 2102
            KI+K+++  G +++FLKW+G+P SENTWEPEENL+CPELIK+F   ++        KR                          S  S  L+  PV  + +E   V++P   KGF R  E D I+ A   N +LMFL+KWKN + A+LV AR AN++CPQ VI FYE  L W 
Sbjct:   32 KIIKVRVRGGKKEYFLKWKGYPHSENTWEPEENLDCPELIKQFEDSRKLETRKSTGKRSIDEGDKSPTRASDVSSENGSKKLTGSPQSKKLKSAPVTKKTEEKGKVVQPNRSKGFSRGLEADKIIGATDSNGELMFLIKWKNSEEADLVPAREANVKCPQVVIKFYEERLTWH 204

HSP 2 Score: 56.6102 bits (135), Expect = 1.753e-8
Identity = 19/43 (44.19%), Postives = 34/43 (79.07%), Query Frame = 3

Query:  525 KILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEF 653
            KI+ +++  GK+ +FLKW+G+P SEN+WEPE+N++   ++ +F
Sbjct:   32 KIIKVRVRGGKKEYFLKWKGYPHSENTWEPEENLDCPELIKQF 74

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Match: SMESG000055314.1 (SMESG000055314.1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.572e-21
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIK--PKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHL 2093
            E+  VEKI+ +   NG R + LKW+ +  S N+WEPEE+L C  LIK F                +       +   + + IK P+IK    GF R  +P  I      ND + F++KW   D  ++V A +AN++CPQ VI FYE++ 
Sbjct:    3 EVIEVEKIIAVSNRNGKRCYLLKWKNYDSSLNSWEPEEHLNCGALIKNF--------------HKNLKLKEFTQNFQLPMTIKVPIIKDHAYGFDRGLKPQIICGVTKKNDAIYFMIKWDGCDEIDVVPAVQANVKCPQLVIRFYENNF 137

HSP 2 Score: 51.2174 bits (121), Expect = 3.368e-7
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVE 668
            E+  VEKI+ +   NGKR + LKW+ +  S NSWEPE+++   A++  F +N++
Sbjct:    3 EVIEVEKIIAVSNRNGKRCYLLKWKNYDSSLNSWEPEEHLNCGALIKNFHKNLK 56

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Match: SMESG000054375.1 (SMESG000054375.1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.572e-21
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 3

Query: 1653 EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIK--PKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHL 2093
            E+  VEKI+ +   NG R + LKW+ +  S N+WEPEE+L C  LIK F                +       +   + + IK P+IK    GF R  +P  I      ND + F++KW   D  ++V A +AN++CPQ VI FYE++ 
Sbjct:    3 EVIEVEKIIAVSNRNGKRCYLLKWKNYDSSLNSWEPEEHLNCGALIKNF--------------HKNLKLKEFTQNFQLPMTIKVPIIKDHAYGFDRGLKPQIICGVTKKNDAIYFMIKWDGCDEIDVVPAVQANVKCPQLVIRFYENNF 137

HSP 2 Score: 51.2174 bits (121), Expect = 3.368e-7
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 3

Query:  507 EIFYVEKILDMKIENGKRIFFLKWEGFPDSENSWEPEQNIESNAMVLEFLQNVE 668
            E+  VEKI+ +   NGKR + LKW+ +  S NSWEPE+++   A++  F +N++
Sbjct:    3 EVIEVEKIIAVSNRNGKRCYLLKWKNYDSSLNSWEPEEHLNCGALIKNFHKNLK 56

[Close]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Match: SMESG000055314.1 (SMESG000055314.1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.299e-14
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 3

Query: 1740 SENTWEPEENLECPELIKEFLAEQXXXXXXXXXXXXXXXXXXXXXXXPVEVQIKEPVIK--PKGFPRSREPDCILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNW 2099
            S N+WEPEE+L C  LIK F                +       +   + + IK P+IK    GF R  +P  I      ND + F++KW   D  ++V A +AN++CPQ VI FYE++ ++
Sbjct:   11 SLNSWEPEEHLNCGALIKNF--------------HKNLKLKEFTQNFQLPMTIKVPIIKDHAYGFDRGLKPQIICGVTKKNDAIYFMIKWDGCDEIDVVPAVQANVKCPQLVIRFYENNFSF 118

The following BLAST results are available for this feature:

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Mouse
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Yeast
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Nematostella
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CBX3	1.571e-34	46.98	chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]	[more]
CBX3	1.571e-34	46.98	chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]	[more]
CBX1	9.443e-30	44.44	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]
CBX1	1.097e-29	44.44	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]
CBX1	1.097e-29	44.44	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
hpl-1	1.062e-14	30.61	HP1 Like (Heterochromatin protein); Heterochromati...	[more]
hpl-2	1.480e-14	31.33	Chromo-domain protein; HP1 Like (Heterochromatin p...	[more]
hpl-2	2.100e-9	29.85	Chromo-domain protein; HP1 Like (Heterochromatin p...	[more]
hpl-2	2.175e-9	29.85	Chromo-domain protein; HP1 Like (Heterochromatin p...	[more]
cec-1	1.347e-6	37.74	Chromo domain-containing protein cec-1 [Source:Un...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
HP1b	8.772e-27	40.67	gene:FBgn0030082 transcript:FBtr0071284	[more]
HP1b	8.772e-27	40.67	gene:FBgn0030082 transcript:FBtr0309871	[more]
HP1b	8.772e-27	40.67	gene:FBgn0030082 transcript:FBtr0301805	[more]
Su(var)205	1.064e-20	30.56	gene:FBgn0003607 transcript:FBtr0079635	[more]
Su(var)205	1.064e-20	30.56	gene:FBgn0003607 transcript:FBtr0079636	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cbx3a	2.042e-38	45.68	chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]
cbx3a	2.512e-38	45.68	chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]
cbx1b	6.050e-31	42.66	chromobox homolog 1b (HP1 beta homolog Drosophila)...	[more]
cbx1b	6.050e-31	42.66	chromobox homolog 1b (HP1 beta homolog Drosophila)...	[more]
cbx1a	2.871e-30	38.89	chromobox homolog 1a (HP1 beta homolog Drosophila)...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
stab2	1.159e-35	45.39	stabilin 2 [Source:Xenbase;Acc:XB-GENE-491156]	[more]
zbtb11	3.388e-33	44.76	zinc finger and BTB domain containing 11 [Source:X...	[more]
tnfaip6	2.697e-30	40.82	TNF alpha induced protein 6 [Source:Xenbase;Acc:XB...	[more]
suv39h2	3.423e-10	50.00	suppressor of variegation 3-9 homolog 2 [Source:NC...	[more]
suv39h2	5.346e-10	50.00	suppressor of variegation 3-9 homolog 2 [Source:NC...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Cbx3	1.079e-34	46.98	chromobox 3 [Source:MGI Symbol;Acc:MGI:108515]	[more]
Cbx3	1.079e-34	46.98	chromobox 3 [Source:MGI Symbol;Acc:MGI:108515]	[more]
Cbx3	1.079e-34	46.98	chromobox 3 [Source:MGI Symbol;Acc:MGI:108515]	[more]
Cbx1	7.534e-30	44.44	chromobox 1 [Source:MGI Symbol;Acc:MGI:105369]	[more]
Cbx5	2.818e-28	38.06	chromobox 5 [Source:MGI Symbol;Acc:MGI:109372]	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P23198\|CBX3_MOUSE	3.656e-34	46.98	Chromobox protein homolog 3 OS=Mus musculus OX=100...	[more]
sp\|Q5R6X7\|CBX3_PONAB	7.547e-34	46.98	Chromobox protein homolog 3 OS=Pongo abelii OX=960...	[more]
sp\|Q13185\|CBX3_HUMAN	7.547e-34	46.98	Chromobox protein homolog 3 OS=Homo sapiens OX=960...	[more]
sp\|P83917\|CBX1_MOUSE	5.270e-29	44.44	Chromobox protein homolog 1 OS=Mus musculus OX=100...	[more]
sp\|P83916\|CBX1_HUMAN	5.270e-29	44.44	Chromobox protein homolog 1 OS=Homo sapiens OX=960...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A5J6BTI0	1.168e-133	62.38	Polycomb group heterochromatin-associated protein ...	[more]
A0A3Q1HAA8	3.660e-35	42.39	Chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]
A0A2R8PXB7	4.569e-35	45.68	Chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]
A0A3B5AY88	4.717e-35	42.39	Chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]
Q0P455	4.795e-35	45.68	Chromobox homolog 3a (HP1 gamma homolog, Drosophil...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cbx3a	5.652e-35	46.10	chromobox protein homolog 3-like [Source:NCBI gene...	[more]
cbx3a	6.699e-35	46.10	chromobox protein homolog 3-like [Source:NCBI gene...	[more]
cbx5	7.821e-34	41.33	chromobox 5 [Source:NCBI gene;Acc:103047453]	[more]
cbx1a	5.369e-31	43.75	chromobox protein homolog 1-like [Source:NCBI gene...	[more]
cbx1a	5.369e-31	43.75	chromobox protein homolog 1-like [Source:NCBI gene...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000009664.1	6.383e-33	44.52	pep scaffold:Pmarinus_7.0:GL477881:602658:605312:-...	[more]
CBX1	8.033e-32	40.38	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]
CBX1	1.258e-28	41.33	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]
CBX1	5.809e-27	35.57	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]
CBX1	1.166e-23	33.14	chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3


Match Name	E-value	Identity	Description
EDO48908	6.500e-11	60.53	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO27150	7.106e-9	43.75	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO40283	2.505e-7	43.75	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cbx3a	2.530e-37	46.98	chromobox protein homolog 3 [Source:NCBI gene;Acc:...	[more]
cbx3b	1.339e-29	38.73	chromobox protein homolog 3 [Source:NCBI gene;Acc:...	[more]
CBX1	1.568e-28	42.25	chromobox protein homolog 1 [Source:NCBI gene;Acc:...	[more]
CBX1	1.243e-26	41.13	chromobox 1 [Source:NCBI gene;Acc:101155967]	[more]
cbx5	1.936e-24	34.30	chromobox 5 [Source:NCBI gene;Acc:101174667]	[more]

BLAST of Chromobox homolog 3a (HP1 gamma homolog, Drosophila) vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000039690.1	0.000e+0	99.49	SMESG000039690.1	[more]
SMESG000004606.1	4.381e-33	41.62	SMESG000004606.1	[more]
SMESG000055314.1	2.572e-21	34.90	SMESG000055314.1	[more]
SMESG000054375.1	2.572e-21	34.90	SMESG000054375.1	[more]
SMESG000055314.1	3.299e-14	33.61	SMESG000055314.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30005626 ID=SMED30005626|Name=Chromobox homolog 3a (HP1 gamma homolog, Drosophila)|organism=Schmidtea mediterranea sexual|type=transcript|length=3578bp
TATATAAATCTTATATGATGCCAAAAAGAAGGAAATGCAAATTAAAAGCT
TTACCCGAACGTCACTGCAAAAAGTCAAAACTAACTATAAATTTGCGTGA
AAATAGAAAATCAATTAATTATGATGAAGCGATAGAGATCAGTAGCGAAG
ACAGTATTGAAAAGAGAGAAAATAAACAAATAGATATTGATAATAGTAGC
AATTCAGATGTTGTTATATTAGATCAGCTTAAACCTTCATTGTTTGAGTC
TATGAAATTAACTTTTCAAGATGAACCATTAGGCGATATTAATAGTTCTA
GTGTTACTAACGATACACCAGATTCTAATGCTTGTAATATTATTGATGAT
AAAATTTCTCTTGGCACAGAGCTGTTAAACTCGAGTCAATTAAATAGAAG
AAAATCAAAAACGCCATCATTACAAGGTAGTGCAATAAGCTTGTCTAGTT
ATGGATCAACTCCAACTAAAAACGGCAGAAAAAAGAAAAAATCTGTCATT
TCCGAAGAAATTTTTTACGTTGAAAAGATTCTTGATATGAAAATAGAAAA
TGGTAAAAGGATTTTCTTTCTAAAATGGGAAGGGTTTCCTGATTCTGAAA
ATTCTTGGGAACCAGAACAAAACATCGAGTCAAATGCAATGGTTCTGGAA
TTTTTACAAAATGTGGAAAAGATGAGAGATGTTGAGATTTCACCTGAAAA
GATTACACTCGTGTCTACTACGGCAGAATCAGATATTCAATTTCTTAACA
ATAGTAAAATTATTGATCCTAATATCGAAATAGAAAAAATAAAAGAGACA
AATAATGAGAATTCAGTTATCGTAGCTAGCAGTGTGGATATTAATAGCAC
CGGGGTTCAAGTCCCTTTTAATAGTGACATTAGTGGGAATGAGAATAATG
TTGTGATTGAACCTCCTGCAATAACTGAAGGTTTTTCTACATCGTATATA
AATAAACAGATCGATGAGGAAACGACTTGTACTTACTTAAATAAAGAATC
GGAAATTATTTTATCTGGAAATCAAAATAATGATTTAGACAAACGAAATT
CATCAATCAGTGAAGAAGATAAATCTTTCGTCGAAGAAACTGAAAATAAG
ATAAATGAAGAAAATAAAATAAATGAAGAAGATAAAATAAATGAAGAAGA
TAAGATAAATGAAGATAAAATGAATGAAGAAAATATGACAAATGAAGAAA
GTAAGATAAATGATGAAAATAAGGCAAACGAAGAAAATAAATCTGAACTC
ACTTCGCAGGTTTCTGAAATTCCATTAATAGTTTTAAGAAACAAAGGTAA
TAAAAAGAAAAAAAGGAAAAGAAGTTGGAAAAAGATTGAAAAAGTTAAAG
TGAATAATAAACCTGCTATTAATTCGGAAAATAAGGAACAAGAGCTTATT
CCAGTAAAACCTGATGAAATATTTCCTGTTGTTTCACAGCGGACTCGTAA
AAATATGAAATCTCTTAAAGAAATTCTGGATTCAAGTGATGTTAGTGATG
CCGGTGGCCATGAAAACGTAGAATTCAATAAATCCGACGGTCGTGAATCG
GATTCTAGTGAACTGTCGAATAAATCCAATAAAAATACTAACAGTATTGC
TTCAAAAGACCCTAATTTATTTTTCCCCGGCAATTTGCCACAAACAGTTC
AAGAAATCTTTATGGTCGAGAAAATTCTAAAAATGAAAATTATGAACGGA
GTTCGTAAATTTTTCTTAAAGTGGGAAGGTTTTCCAGATTCAGAAAATAC
ATGGGAACCGGAAGAAAACCTAGAATGCCCGGAATTAATAAAGGAATTTC
TCGCGGAGCAACGAAGAAATAAAAACGCCAGAAAACGAAAACGACTATCA
TCAGCAGATTCCCTTGCACTTGAAGAGTTGCCGGTAGAAGTTCAGATTAA
AGAACCGGTTATAAAACCGAAAGGATTTCCTCGATCTCGAGAACCGGATT
GTATTTTGGCAGCTGGAATGATGAATGATCAATTAATGTTTCTCGTCAAA
TGGAAAAATGTTGATATGGCAAACTTAGTGTCGGCTCGTCGAGCAAATAT
TGAATGTCCACAGACCGTTATTAGTTTCTATGAAAGTCATCTCAACTGGT
TTAATACTGATCATTTGAATTTTTCTTCTGTACCCAAAGAAAATCTTGCA
GATGAAATTGAAGAAGAACCTAAACAAACTAAATCCAATGTAAAGAAATC
CAGCGGAAATTTGAAAAATTCTATGGATGGTTTAATTTCTCTATTGGATG
ATGTTCATGACAACAAAATCATTCAAAAGCCAGTAAATGTTCCCAGAATC
CATCCGAAACCAATGAAAACAATCAGAAACCCCAATATGCAAACTCCTCG
TCGAGGAAGACCGCTTACGAAGCTATTCAACCATTCACTTACACCGAAAA
AATCTGCGACTGGCAGCAGTAGTCATAGTATGATGAATTTAATCCGAAAT
TTCAAAAATCCAAGGTTTCCATCACAAGCACCAAAACCTTCCGTTTCCGA
TTTACAGTCTCGACCGTTACCACCACCAACACCGTTGGAAAATCTCAGTC
GGGTGTATGATTCAAGAGAAATACCAAAAGACCCAAGTCCCCCTCCTATA
TTTGAGCCTCCTAAACCAATCATTCAAACCACGATGTTGAGGCCTATCAA
TAGTTATCGACCGGATTTCAATCCTCGCCGTTTCGGATTATTAAGTCGAC
CACAAACAACAAATGTTCCTCAAATGTCACAAAATATTCCCCAGAAAATC
TCTATGCCATCTATAACCCCATCGTTATCGATGCCAGCATTGAAACCCTG
TCCAAACGTGACAATTCTCCCTAAAAACTATCAAATATCCAACTATAATC
CGGCGCTTGTAAATAACTATATCTCTGTCGATGACAATATAACATTGATC
AATGGAACGATACCACAGCAGAGCAACTCCAATCCTTTGTCGCATTATTT
GAAAGTTGTCGATTCTATTACCAGTGAATTCCCGGTTACCCAATCGCCTG
TTCAGCAGATTATCAACCCAGATCAAAAACCCCAATTATCCTATCAAAAT
GTTCCCGATTCACTAATCAGCAATTTTATCCAATCAAATAACAGCAACAA
CAATACTAATAATAATAACAACAGCAATACAAACAATGGTTTCCTTAATC
CAATAAACCAAATGCGATCAATGGCAGTATCCATAGATCAGCAGTTGAGA
ACGAATCAATTAGATAATGCCAATAATTACCAACAGAACTATAACAATAT
TCAAACTGCAAACAGCAATAACAATAACAGATGTAATAATAATAATAATA
CCAATATGAGCAATATCAATAAAACTCGAATGCAATTGGCATCGGCCTTG
CAATCGCGCTACCAGCTCAATTCCGCAATCACAAATCACCACAATATCCT
TCCGTCAAGCAATCAAGTCAATATCTATCCGTCTGCCGGTGTTGGCGGTA
ATAATCAGATGTCATTACCCCAATATCAATTTGTTATCCAACAAGCCCAG
AATTATCCCAATCAGACCAGTTTAATCCAATCTCAACCCCAGCAGCAGCA
GCAGCAACAACAAAAAAACCGATTATCC

protein sequence of SMED30005626-orf-1

>SMED30005626-orf-1 ID=SMED30005626-orf-1|Name=SMED30005626-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1192bp
YKSYMMPKRRKCKLKALPERHCKKSKLTINLRENRKSINYDEAIEISSED
SIEKRENKQIDIDNSSNSDVVILDQLKPSLFESMKLTFQDEPLGDINSSS
VTNDTPDSNACNIIDDKISLGTELLNSSQLNRRKSKTPSLQGSAISLSSY
GSTPTKNGRKKKKSVISEEIFYVEKILDMKIENGKRIFFLKWEGFPDSEN
SWEPEQNIESNAMVLEFLQNVEKMRDVEISPEKITLVSTTAESDIQFLNN
SKIIDPNIEIEKIKETNNENSVIVASSVDINSTGVQVPFNSDISGNENNV
VIEPPAITEGFSTSYINKQIDEETTCTYLNKESEIILSGNQNNDLDKRNS
SISEEDKSFVEETENKINEENKINEEDKINEEDKINEDKMNEENMTNEES
KINDENKANEENKSELTSQVSEIPLIVLRNKGNKKKKRKRSWKKIEKVKV
NNKPAINSENKEQELIPVKPDEIFPVVSQRTRKNMKSLKEILDSSDVSDA
GGHENVEFNKSDGRESDSSELSNKSNKNTNSIASKDPNLFFPGNLPQTVQ
EIFMVEKILKMKIMNGVRKFFLKWEGFPDSENTWEPEENLECPELIKEFL
AEQRRNKNARKRKRLSSADSLALEELPVEVQIKEPVIKPKGFPRSREPDC
ILAAGMMNDQLMFLVKWKNVDMANLVSARRANIECPQTVISFYESHLNWF
NTDHLNFSSVPKENLADEIEEEPKQTKSNVKKSSGNLKNSMDGLISLLDD
VHDNKIIQKPVNVPRIHPKPMKTIRNPNMQTPRRGRPLTKLFNHSLTPKK
SATGSSSHSMMNLIRNFKNPRFPSQAPKPSVSDLQSRPLPPPTPLENLSR
VYDSREIPKDPSPPPIFEPPKPIIQTTMLRPINSYRPDFNPRRFGLLSRP
QTTNVPQMSQNIPQKISMPSITPSLSMPALKPCPNVTILPKNYQISNYNP
ALVNNYISVDDNITLINGTIPQQSNSNPLSHYLKVVDSITSEFPVTQSPV
QQIINPDQKPQLSYQNVPDSLISNFIQSNNSNNNTNNNNNSNTNNGFLNP
INQMRSMAVSIDQQLRTNQLDNANNYQQNYNNIQTANSNNNNRCNNNNNT
NMSNINKTRMQLASALQSRYQLNSAITNHHNILPSSNQVNIYPSAGVGGN
NQMSLPQYQFVIQQAQNYPNQTSLIQSQPQQQQQQQQKNRLS

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0005719	nuclear euchromatin
GO:0005634	nucleus

Vocabulary: **biological process**
Term	Definition
GO:0045892	negative regulation of transcription, DNA-templated

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000034	epidermis
PLANA:0000429	neoblast
PLANA:0002056	medial muscle cell

Vocabulary: **INTERPRO**
Term	Definition
IPR038033	CBX3
IPR000953	Chromo/chromo_shadow_dom
IPR008251	Chromo_shadow_dom
IPR023780	Chromo_domain
IPR023779	Chromodomain_CS
IPR016197	Chromo-like_dom_sf
IPR004172	L27_dom

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 355..375
None	No IPR available	COILS	Coil	Coil	coord: 390..410
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 628..698 e-value: 3.4E-21 score: 76.7
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 147..223 e-value: 5.7E-17 score: 63.2 coord: 539..608 e-value: 5.2E-21 score: 76.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 816..844
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..407
None	No IPR available	PANTHER	PTHR22812	CHROMOBOX PROTEIN	coord: 545..697
None	No IPR available	PANTHER	PTHR22812	CHROMOBOX PROTEIN	coord: 151..220
None	No IPR available	CDD	cd00024	CD_CSD	coord: 166..214 e-value: 2.41564E-15 score: 69.0429
None	No IPR available	CDD	cd00034	CSD	coord: 641..692 e-value: 7.12268E-18 score: 76.4805
None	No IPR available	CDD	cd18631	CD_HP1_like	coord: 548..596 e-value: 3.89279E-19 score: 79.7886
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 166..217 e-value: 1.5E-11 score: 54.4 coord: 547..599 e-value: 2.1E-15 score: 67.2 coord: 640..692 e-value: 35.0 score: 1.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 641..699 score: 10.494
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 548..606 score: 19.526
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 166..228 score: 17.01
IPR008251	Chromo shadow domain	SMART	SM00300	ChS_2	coord: 635..697 e-value: 1.0E-10 score: 51.6
IPR008251	Chromo shadow domain	PFAM	PF01393	Chromo_shadow	coord: 642..694 e-value: 1.3E-17 score: 63.6
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 548..595 e-value: 6.1E-14 score: 51.7 coord: 168..212 e-value: 2.3E-11 score: 43.4
IPR038033	Chromobox protein homologue 3	PANTHER	PTHR22812:SF134	CHROMOBOX PROTEIN HOMOLOG 3	coord: 151..220 coord: 545..697
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 183..203
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 565..585
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	SSF54160	Chromo domain-like	coord: 633..696
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	SSF54160	Chromo domain-like	coord: 161..215
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	SSF54160	Chromo domain-like	coord: 545..600

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Chromobox homolog 3a (HP1 gamma homolog, Drosophila)

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Owlery

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