Secretory carrier-associated membrane protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005604 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Match: SCAMP4 (secretory carrier membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:30385]) HSP 1 Score: 54.299 bits (129), Expect = 7.025e-8 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 R+DSS + FF Q + IQ IG S G+CGWL+ + F + +ML AIM+S+ + + KVH +YR +G Sbjct: 54 RADSSFNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAG 136
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Match: SCAMP1 (secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:10563]) HSP 1 Score: 55.0694 bits (131), Expect = 3.945e-7 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 211 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 293
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Match: SCAMP1 (secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:10563]) HSP 1 Score: 54.299 bits (129), Expect = 5.581e-7 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 185 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 267
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Match: SCAMP4 (secretory carrier membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:30385]) HSP 1 Score: 53.5286 bits (127), Expect = 5.597e-7 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 R+DSS + FF Q + IQ IG S G+CGWL+ + F + +ML AIM+S+ + + KVH +YR +G Sbjct: 98 RADSSFNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAG 180
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Match: SCAMP4 (secretory carrier membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:30385]) HSP 1 Score: 53.5286 bits (127), Expect = 5.597e-7 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 R+DSS + FF Q + IQ IG S G+CGWL+ + F + +ML AIM+S+ + + KVH +YR +G Sbjct: 98 RADSSFNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAG 180
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Celegans
Match: scm-1 (Secretory carrier-associated membrane protein [Source:UniProtKB/TrEMBL;Acc:G5EED5]) HSP 1 Score: 51.9878 bits (123), Expect = 1.412e-6 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 2669 IQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 +Q +G+S +CGW+N L+ F ++ +ML AI +++ L G + L KVH LYR +G Sbjct: 233 VQTLGLSNY-ACGWINALDTFNVSVPIALLMLISAITFTVALTGMVTALVKVHRLYRGAG 291
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Celegans
Match: scm-1 (Secretory carrier-associated membrane protein [Source:UniProtKB/TrEMBL;Acc:G5EED5]) HSP 1 Score: 51.2174 bits (121), Expect = 1.890e-6 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 2669 IQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 +Q +G+S +CGW+N L+ F ++ +ML AI +++ L G + L KVH LYR +G Sbjct: 167 VQTLGLSNY-ACGWINALDTFNVSVPIALLMLISAITFTVALTGMVTALVKVHRLYRGAG 225
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Celegans
Match: scm-1 (Secretory carrier-associated membrane protein [Source:UniProtKB/TrEMBL;Acc:G5EED5]) HSP 1 Score: 48.9062 bits (115), Expect = 3.814e-6 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 2669 IQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 +Q +G+S +CGW+N L+ F ++ +ML AI +++ L G + L KVH LYR +G Sbjct: 77 VQTLGLSNY-ACGWINALDTFNVSVPIALLMLISAITFTVALTGMVTALVKVHRLYRGAG 135
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Zebrafish
Match: scamp5a (secretory carrier membrane protein 5a [Source:NCBI gene;Acc:324467]) HSP 1 Score: 56.9954 bits (136), Expect = 2.591e-8 Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 +SDSS + FF Q+ + IQ +GI G CGWL + F+ N + +ML IM++ + + + L+KVHN YR SG Sbjct: 95 KSDSSFNFMAFFFVFMAQVVISIIQTVGIPGWGVCGWLATITFFSTNIGSAVVMLIPTIMFTAVAVLSFIALTKVHNFYRGSG 177
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Zebrafish
Match: scamp3 (secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]) HSP 1 Score: 55.4546 bits (132), Expect = 1.756e-7 Identity = 38/126 (30.16%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSGMIQSSVEMDNDE----AMSTESLRDIATISQKTSSGYAMNGPK 2965 RSDSS +F FF F Q+ + + IGI G GW+ L A + ++ G+IM+ A++++ L +V+L +VH++YR + ++S E E +S +++R AT + +++ A P+ Sbjct: 219 RSDSSFNFFAFFFVFFAQLVLYVMMTIGIPGWGFSGWIVSLAALSTSKAVGAIMMMNAVLFTAQLAMGIVLLKRVHSMYRQT---EASFEKAQAEFATGVLSNQAVRQAATNATVSAAQGAFTAPR 341
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Zebrafish
Match: scamp1 (secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]) HSP 1 Score: 54.6842 bits (130), Expect = 3.672e-7 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q IGI+ G+ GW++ L + G IM+ IA +++ + L++ KVH LYR +G Sbjct: 216 RSDSSFRFFVFFFVYICQFGVHVLQAIGITGWGASGWISALTGLNTSIPVGIIMILIAALFTASAVISLIMFKKVHALYRTTG 298
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Zebrafish
Match: scamp5b (secretory carrier membrane protein 5b [Source:ZFIN;Acc:ZDB-GENE-120215-76]) HSP 1 Score: 51.2174 bits (121), Expect = 2.006e-6 Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSGMIQSSVE 2869 ++DSS + FF Q+ + IQ IGI G CGWL + F + IML +M++ + + + L+KVHN YR SG S + Sbjct: 95 KTDSSFYFMAFFFVFMAQLFIAIIQAIGIPGWGVCGWLGTISFFGTSIFASIIMLIPTLMFTAVSVISFLALTKVHNFYRGSGASMSKAQ 184
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Match: scamp5 (secretory carrier membrane protein 5 gene 2 [Source:NCBI gene;Acc:779947]) HSP 1 Score: 52.373 bits (124), Expect = 1.393e-6 Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 ++DSS + FF T GQ+ + IQ +GI G CGW+ + F + +ML IM++ + + V L+KVH YR +G Sbjct: 98 KTDSSFNFMAFFFTFTGQLVISIIQAVGIPGWGVCGWIATISFFGTSIGAAVVMLIPTIMFTAVAVLSFVALTKVHRFYRGAG 180
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Match: scamp1 (secretory carrier membrane protein 1 [Source:NCBI gene;Acc:549944]) HSP 1 Score: 52.373 bits (124), Expect = 2.591e-6 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q G G+CGW++ L + G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 213 RSDSSFRFFVFFFVYICQFGVHVLQAAGFQGWGNCGWISALTGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 295
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Match: scamp1 (secretory carrier membrane protein 1 [Source:NCBI gene;Acc:549944]) HSP 1 Score: 52.373 bits (124), Expect = 2.659e-6 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q G G+CGW++ L + G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 213 RSDSSFRFFVFFFVYICQFGVHVLQAAGFQGWGNCGWISALTGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 295
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Match: scamp1 (secretory carrier membrane protein 1 [Source:NCBI gene;Acc:549944]) HSP 1 Score: 51.9878 bits (123), Expect = 3.739e-6 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q G G+CGW++ L + G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 213 RSDSSFRFFVFFFVYICQFGVHVLQAAGFQGWGNCGWISALTGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 295
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Match: scamp5 (secretory carrier membrane protein 5 gene 2 [Source:NCBI gene;Acc:779947]) HSP 1 Score: 50.0618 bits (118), Expect = 6.829e-6 Identity = 28/83 (33.73%), Postives = 45/83 (54.22%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 ++DSS + FF T Q+ + IQ +GI G CGW+ + F + +MLF I+++ + + V L+KVH YR +G Sbjct: 98 KTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAG 180
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Match: Scamp1 (secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]) HSP 1 Score: 55.4546 bits (132), Expect = 2.350e-7 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 211 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 293
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Match: Scamp1 (secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]) HSP 1 Score: 53.9138 bits (128), Expect = 4.483e-7 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 159 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 241
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Match: Scamp1 (secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]) HSP 1 Score: 53.9138 bits (128), Expect = 4.483e-7 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 159 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 241
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Match: Scamp4 (secretory carrier membrane protein 4 [Source:MGI Symbol;Acc:MGI:1928947]) HSP 1 Score: 51.6026 bits (122), Expect = 1.851e-6 Identity = 38/129 (29.46%), Postives = 59/129 (45.74%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDND------------EAMSTESLRDIATISQKTSSG 2944 R+DSS + FF Q + IQ IG S G+CGWL + F + +ML AI++S+ + V + KVH +YR +G + ++ E + S SL + T+ +SSG Sbjct: 98 RADSSFNFMTFFFIFGAQFVLTVIQAIGFSGWGACGWLAAVGFFGTSVGAAVVMLVPAILFSLSALVMAVTIVKVHRIYRGAGGSLQKAQTEWSAGTWRNPPSREAQFNSFSGNSLPEYPTVPSYSSSG 226
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Match: Scamp4 (secretory carrier membrane protein 4 [Source:MGI Symbol;Acc:MGI:1928947]) HSP 1 Score: 51.6026 bits (122), Expect = 1.851e-6 Identity = 38/129 (29.46%), Postives = 59/129 (45.74%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDND------------EAMSTESLRDIATISQKTSSG 2944 R+DSS + FF Q + IQ IG S G+CGWL + F + +ML AI++S+ + V + KVH +YR +G + ++ E + S SL + T+ +SSG Sbjct: 98 RADSSFNFMTFFFIFGAQFVLTVIQAIGFSGWGACGWLAAVGFFGTSVGAAVVMLVPAILFSLSALVMAVTIVKVHRIYRGAGGSLQKAQTEWSAGTWRNPPSREAQFNSFSGNSLPEYPTVPSYSSSG 226
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Match: sp|Q6P0C7|SCAM5_DANRE (Secretory carrier-associated membrane protein 5 OS=Danio rerio OX=7955 GN=scamp5 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.956e-7 Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 +SDSS + FF Q+ + IQ +GI G CGWL + F+ N + +ML IM++ + + + L+KVHN YR SG Sbjct: 95 KSDSSFNFMAFFFVFMAQVVISIIQTVGIPGWGVCGWLATITFFSTNIGSAVVMLIPTIMFTAVAVLSFIALTKVHNFYRGSG 177
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Match: sp|Q6GM42|SCM5B_XENLA (Secretory carrier-associated membrane protein 5B OS=Xenopus laevis OX=8355 GN=scamp5-b PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 5.077e-7 Identity = 31/90 (34.44%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSGMIQSSVE 2869 ++DSS + FF T GQ+ + IQ +GI G CGW+ + F N + +ML IM++ + + V L+KVH YR +G S + Sbjct: 98 KTDSSFNFMAFFFTFTGQLVISIIQAVGIPGWGVCGWIASISFFGTNVGSAVVMLIPTIMFTAVAVLSFVALTKVHRFYRGAGGSMSKAQ 187
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Match: sp|Q8K021|SCAM1_MOUSE (Secretory carrier-associated membrane protein 1 OS=Mus musculus OX=10090 GN=Scamp1 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.644e-6 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 211 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 293
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Match: sp|P56603|SCAM1_RAT (Secretory carrier-associated membrane protein 1 OS=Rattus norvegicus OX=10116 GN=Scamp1 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.749e-6 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 211 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 293
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Match: sp|O15126|SCAM1_HUMAN (Secretory carrier-associated membrane protein 1 OS=Homo sapiens OX=9606 GN=SCAMP1 PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 1.894e-6 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q AV +Q G G+CGW++ L N G +M+ IA +++ + LV+ KVH LYR +G Sbjct: 211 RSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTG 293
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Match: A0A183LFK4 (Secretory carrier-associated membrane protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS2579 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.399e-14 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDN 2878 RSDSS Y LFF+ GQ ++ IQC+GI +LGSCGW+NG++ + N G +ML IA ++SIL +L KVH YR+SG + ++ +EM N Sbjct: 100 RSDSSANYLLFFLFFSGQTVIVLIQCLGIDYLGSCGWINGIKTISRNDGVGVLMLLIATIFSILAGFCSFLLFKVHRYYRSSGASLHKAKLEMAN 194
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Match: C1LED4 (Secretory carrier-associated membrane protein OS=Schistosoma japonicum OX=6182 GN=EWB00_008970 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.700e-14 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDN 2878 RSDSS Y +FF+ GQ +I IQC+GI +LGSCGW+NG++ + G +ML IA ++SIL ++L KVH YR SG + ++ +EM N Sbjct: 204 RSDSSANYLIFFLFFSGQTIIILIQCLGIDYLGSCGWINGIKTLHHSDGVGVLMLLIATLFSILAGFCCLLLFKVHRHYRTSGASLQKAKLEMTN 298
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Match: A0A4Z2CN86 (Secretory carrier-associated membrane protein OS=Schistosoma japonicum OX=6182 GN=EWB00_008970 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.206e-14 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDN 2878 RSDSS Y +FF+ GQ +I IQC+GI +LGSCGW+NG++ + G +ML IA ++SIL ++L KVH YR SG + ++ +EM N Sbjct: 210 RSDSSANYLIFFLFFSGQTIIILIQCLGIDYLGSCGWINGIKTLHHSDGVGVLMLLIATLFSILAGFCCLLLFKVHRHYRTSGASLQKAKLEMTN 304
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Match: A0A3Q0KL87 (Secretory carrier-associated membrane protein OS=Schistosoma mansoni OX=6183 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.808e-14 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDN 2878 RSDSS Y +FF+ GQ +I IQC+GI +LGSCGW+NG++ N G +ML IA ++SIL +L KVH YR+SG + ++ +EM N Sbjct: 204 RSDSSANYLIFFLFFSGQTIIILIQCLGIDYLGSCGWINGIKTVNHNDGVGVLMLLIATIFSILAGFCSFLLFKVHKYYRSSGASLHKAKLEMAN 298
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Match: G4VML6 (Secretory carrier-associated membrane protein OS=Schistosoma mansoni OX=6183 GN=Smp_127650 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.260e-14 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG--MIQSSVEMDN 2878 RSDSS Y +FF+ GQ +I IQC+GI +LGSCGW+NG++ N G +ML IA ++SIL +L KVH YR+SG + ++ +EM N Sbjct: 150 RSDSSANYLIFFLFFSGQTIIILIQCLGIDYLGSCGWINGIKTVNHNDGVGVLMLLIATIFSILAGFCSFLLFKVHKYYRSSGASLHKAKLEMAN 244
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Cavefish
Match: scamp5a (secretory carrier-associated membrane protein 5 [Source:NCBI gene;Acc:103029914]) HSP 1 Score: 56.6102 bits (135), Expect = 2.694e-8 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSGMIQSSVEMD 2875 ++DSS + FF Q+ + IQ +GI G CGWL + F+ N + +ML IM++ + + + L+KVHN YR SG S + + Sbjct: 95 KTDSSFNFMAFFFVFMAQVVISIIQTVGIPGWGVCGWLATITFFSTNIGSAVVMLIPTIMFTAVAVLSFIALTKVHNFYRGSGGSMSKAQQE 186
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Cavefish
Match: scamp1 (secretory carrier membrane protein 1 [Source:NCBI gene;Acc:103025528]) HSP 1 Score: 54.6842 bits (130), Expect = 2.725e-7 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q IGI+ G+ GW++ L + G IM+ IA +++ + L++ KVH LYR +G Sbjct: 216 RSDSSFRFFVFFFVYICQFGVHVLQAIGIAGWGASGWISALTGLNTSIPVGIIMILIAALFTASAVISLIMFKKVHGLYRTTG 298
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Cavefish
Match: scamp3 (secretory carrier membrane protein 3 [Source:NCBI gene;Acc:103021636]) HSP 1 Score: 53.1434 bits (126), Expect = 8.642e-7 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNS 2845 RSDSS +F FF F Q+ V I IGI G GW+ GL A N G IML A++++ +V+L KVH++YR + Sbjct: 217 RSDSSFNFFAFFFIFFAQVVVYVIMTIGIPGWGFSGWIVGLYALKKNVAVGVIMLLNAVLFTAQAAMGVVMLKKVHSMYRQT 298
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Sea Lamprey
Match: SCAMP5 (secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]) HSP 1 Score: 71.2478 bits (173), Expect = 4.118e-14 Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS Y LFF T GQ+ + IQ +GI G CGW+ + F N G +MLF IM++ L + + L KVH+ YR G Sbjct: 98 RSDSSFNYMLFFFTFSGQVVLNIIQAVGIPGWGVCGWIATISYFGTNIGVGVVMLFPTIMFTGLAVISFLALIKVHSFYRGGG 180
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Sea Lamprey
Match: scamp1 (secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]) HSP 1 Score: 53.5286 bits (127), Expect = 1.186e-7 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS +FLFF F Q V +Q IGI G+CGW+ LEA + G I++ +A ++ + +V+L KVH+LYR +G Sbjct: 212 RSDSSFNFFLFFFIFFCQFVVHVMQSIGIPGWGNCGWIASLEALNHSIGVGIILMLLAAFFTGSAVLSVVMLKKVHSLYRQTG 294
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Nematostella
Match: EDO31962 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWE3]) HSP 1 Score: 49.2914 bits (116), Expect = 6.076e-6 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIG---HLVVLSKVHNLYRNSG 2848 ++DSS Y +FF+ F I++ +G+ GSCG++ + + SIM+FI ++LL G +++ KVH +YR +G Sbjct: 223 KNDSSFSYIIFFLIFFLHISINIYYTLGMPGGGSCGFITATDTWHGTNKAVSIMMFICA--AMLLAGVGIDCILIVKVHRIYRQAG 306
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Medaka
Match: SCAMP1 (secretory carrier-associated membrane protein 1 [Source:NCBI gene;Acc:101157947]) HSP 1 Score: 65.4698 bits (158), Expect = 1.150e-10 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q IGI+ G+CGW+ L + G IML IA +++ L +G L++ KVH LYR +G Sbjct: 220 RSDSSFRFFVFFFIYICQFGVHVLQAIGITGWGTCGWIAALTGLNTSIPVGIIMLLIAALFTALAVGSLIMFKKVHALYRTTG 302
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Medaka
Match: SCAMP1 (secretory carrier-associated membrane protein 1 [Source:NCBI gene;Acc:101157947]) HSP 1 Score: 64.6994 bits (156), Expect = 1.604e-10 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q V +Q IGI+ G+CGW+ L + G IML IA +++ L +G L++ KVH LYR +G Sbjct: 187 RSDSSFRFFVFFFIYICQFGVHVLQAIGITGWGTCGWIAALTGLNTSIPVGIIMLLIAALFTALAVGSLIMFKKVHALYRTTG 269
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Medaka
Match: scamp1 (secretory carrier membrane protein 1 [Source:NCBI gene;Acc:101169127]) HSP 1 Score: 58.151 bits (139), Expect = 2.166e-8 Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 RSDSS ++F+FF Q + IQCIGIS G+ GW++ L + G IM+ +A +++ L + L++ K+H LYR +G Sbjct: 215 RSDSSFRFFVFFFVYVCQFGIYVIQCIGISGWGASGWISALMGLNTSIPVGIIMILVAALFTSLAVMSLIMFKKIHALYRTTG 297
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Medaka
Match: scamp5a (secretory carrier-associated membrane protein 5 [Source:NCBI gene;Acc:101171075]) HSP 1 Score: 56.225 bits (134), Expect = 3.991e-8 Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSG 2848 ++DSS + FF Q+ + IQ +GI G CGWL + F+ N + +ML +M++ + ++VL+KVHN YR SG Sbjct: 95 KTDSSFNFMAFFFVFMAQVVISIIQAVGIPGWGVCGWLATITFFSTNIGSAVVMLIPTVMFTAVAALSVIVLTKVHNFYRGSG 177
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Match: SMESG000014496.1 (SMESG000014496.1) HSP 1 Score: 80.4925 bits (197), Expect = 3.172e-15 Identity = 53/217 (24.42%), Postives = 94/217 (43.32%), Query Frame = 2 Query: 1508 DIGVTFKEKAHNLFLRIYILKISNKFSEDKIHQ---LKPNEIY-KLKLYRKWQLKITYLTERIAESELIKGMPALISCKAFGGFPHKYVEFYGIEKLNVTNRTLDRMNNILTISFIPQLSDYGETIGCKVGADRFTTRLRVYYPRKKLIVIPNLRREIEIHNFYFCSFAGKFTASFARWNFIKGPPGWERYLKIL-NGNVLHAFDAPQSENFWEFSC 2143 +I + FK AHN +L I+ NKF K + L +Y K++L+ QL ++ + E+I + SC+AFGG P + +F LNV + ++ N + ++ LSD+ C G T +R+++ L + P +++ ++ C + W I+GPP +R+ G+ +H + W F C Sbjct: 109 NISIMFKRGAHNKYLEIFYFSAPNKFQRRKYLKNLSLAKRLLYQKIELFMPSQLNLSMYPLNVDRKEIIINDMVMASCRAFGGIPQEKPKFEDHVHLNVMEKIYNKTTNEIRMNLRASLSDHLTNFSCSAGNVTETYTIRIHHHPTALYIQPIIKKRFRSNSTIICFTKDGYPDPEINWQLIEGPPNADRFYNFPGKGDQIHINSNSPVGSKWTFKC 325
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Match: SMESG000010460.1 (SMESG000010460.1) HSP 1 Score: 79.337 bits (194), Expect = 3.829e-15 Identity = 67/253 (26.48%), Postives = 111/253 (43.87%), Query Frame = 2 Query: 1424 PNFNNNGEKLLCGPYFDVVSAKFLNNGY--DIGVTFKEKAHNLFLRIYILKISNKFSE-------DKIHQLKPNEIYKLKLYRKWQLKITYLTERIAESELIKGMPALISCKAFGGFPHKYVEFYGIEKLNVTNRTLDRMNNILT---ISFIPQLSDYGETIGCKVGADRFTTRLRVYYPRKKLIVIPNLRREIEIHNFYFCSFAGKFTASFARWNFIKGPPGWERYLKIL-NGNVLHAFDAPQSENFWEFSC 2143 P F ++ K + G YF+V + N Y ++ V F E A+ ++ + S++ DK Q K + + L+ W+L++ T E L ++ CKA GGFP V F G+E L+ T ++ +NI T +F Q+ + + IGC+ G D F L++++ + +P + + +C ARW ++ GP E Y I NG+VLH + W F C Sbjct: 75 PGFQSSLPKRISGEYFNV--KNYTINPYLIEVVVKFHEIANKAQFQMIFFESSSRDHRMNVMNNIDKFPQYKFGPL-NISLWLHWKLELIQKTLDHREDGLTANSTGILICKASGGFPFSRVRFIGLESLSGT--LTEKSDNIATEIQFTFHSQIQHHMKKIGCQAGKDVFHDTLKIFHHPTSVKFVPAVDGFVRNGTSVYCYPGNGHPTPTARWVWVSGPKNSELYFLISKNGSVLHMNKNAPLGSKWIFEC 322
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Match: SMESG000013579.1 (SMESG000013579.1) HSP 1 Score: 76.6406 bits (187), Expect = 2.091e-14 Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 1508 DIGVTFKEKAHNLFLRIYILKISNKFSEDKIHQLKPNEIYK------LKLYRKWQLKITYLTERIAESELIKGMPALISCKAFGGFPHKYVEFYGIEKLNVTNRTLDRMNNILTISFIPQLSDYGETIGCKVGADRFTTRLRVYYPRKKLIVIPNLRREIEIHNFYFCSFAGKFTASFARWNFIKGPPGWERY 2068 +I + FK AHN +L I+ SNKF K LK + K ++L+ L I+ L ++ E+I + SC+AFGG P + F LNVT R ++ N + ++F L+D+ GC G T +R+Y+ ++ + P++ ++ + C + + I+GP Y Sbjct: 108 NISIIFKRGAHNKYLEIFYFSASNKFQRRKY--LKNLSLAKRLFHELIELFIPPGLAISVLPIKVDRKEIIINDMVMASCRAFGGIPQEKPRFEDHAHLNVTERIYNKTANEIRMNFRISLNDHLTNFGCSAGNVTETFTIRIYHHPSQIYIKPDINEILQANRVIQCYAKNGYAQPSGHFQLIEGPSNASLY 298
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Match: SMESG000064285.1 (SMESG000064285.1) HSP 1 Score: 73.9442 bits (180), Expect = 6.338e-14 Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 2600 RSDSSIQYFLFFITMFGQIAVIAIQCIGISWLGSCGWLNGLEAFAINRTTGSIMLFIAIMYSILLIGHLVVLSKVHNLYRNSGMIQSSVEMDNDEAMSTESLRDI 2914 R DSS YF+FFI + QI + IQ +GI WLGSCG++N L+ F + TG IM FI + +S L L++L KV+ +YR++ I + DN + ST L+ + Sbjct: 170 RWDSSTNYFMFFIIICCQIVITGIQMLGIDWLGSCGFINSLKMFRKDILTGCIMFFIGLWFSALFTLFLILLFKVNYIYRHA--IVPDAQADNSK-FSTNILKGV 271
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Match: SMESG000013579.1 (SMESG000013579.1) HSP 1 Score: 76.2554 bits (186), Expect = 7.610e-14 Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 1508 DIGVTFKEKAHNLFLRIYILKISNKFSEDKIHQLKPNEIYK------LKLYRKWQLKITYLTERIAESELIKGMPALISCKAFGGFPHKYVEFYGIEKLNVTNRTLDRMNNILTISFIPQLSDYGETIGCKVGADRFTTRLRVYYPRKKLIVIPNLRREIEIHNFYFCSFAGKFTASFARWNFIKGPPGWERY 2068 +I + FK AHN +L I+ SNKF K LK + K ++L+ L I+ L ++ E+I + SC+AFGG P + F LNVT R ++ N + ++F L+D+ GC G T +R+Y+ ++ + P++ ++ + C + + I+GP Y Sbjct: 108 NISIIFKRGAHNKYLEIFYFSASNKFQRRKY--LKNLSLAKRLFHELIELFIPPGLAISVLPIKVDRKEIIINDMVMASCRAFGGIPQEKPRFEDHAHLNVTERIYNKTANEIRMNFRISLNDHLTNFGCSAGNVTETFTIRIYHHPSQIYIKPDINEILQANRVIQCYAKNGYAQPSGHFQLIEGPSNASLY 298 The following BLAST results are available for this feature:
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Secretory carrier-associated membrane protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Secretory carrier-associated membrane protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Secretory carrier-associated membrane protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Secretory carrier-associated membrane protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005604 ID=SMED30005604|Name=Secretory carrier-associated membrane protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3362bpback to top protein sequence of SMED30005604-orf-1 >SMED30005604-orf-1 ID=SMED30005604-orf-1|Name=SMED30005604-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=582bp MKICYFLIAAILNSITALSFGLKTLTAKIQEVTNLRLDEVAYNNSYLLIMback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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