Serine/arginine-rich splicing factor 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005206 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Match: SRSF1 (serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]) HSP 1 Score: 158.303 bits (399), Expect = 3.241e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Match: SRSF1 (serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]) HSP 1 Score: 158.303 bits (399), Expect = 3.647e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Match: AC015813.2 (novel transcript) HSP 1 Score: 155.606 bits (392), Expect = 1.081e-45 Identity = 86/185 (46.49%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTY 639 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Match: SRSF1 (serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]) HSP 1 Score: 155.606 bits (392), Expect = 1.081e-45 Identity = 86/185 (46.49%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTY 639 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Match: SRSF1 (serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]) HSP 1 Score: 155.606 bits (392), Expect = 1.081e-45 Identity = 86/185 (46.49%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTY 639 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Match: rsp-3 (Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]) HSP 1 Score: 147.902 bits (372), Expect = 1.646e-42 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 KVYVGNLP D+R EVE +F KYGRIK VD+K+ +FAFVE+E RDAEDA+ R+ Y ++G ++VE ++G G G R GG + R G + T +RV V GLP + SWQDLKDHM+ AGDV YADV RDGTGV ++ +D+KYA++ LDD++ +++ G+ Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRG-------GGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 188
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Match: rsp-3 (Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]) HSP 1 Score: 147.902 bits (372), Expect = 1.646e-42 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 KVYVGNLP D+R EVE +F KYGRIK VD+K+ +FAFVE+E RDAEDA+ R+ Y ++G ++VE ++G G G R GG + R G + T +RV V GLP + SWQDLKDHM+ AGDV YADV RDGTGV ++ +D+KYA++ LDD++ +++ G+ Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRG-------GGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 188
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Match: rsp-3 (Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]) HSP 1 Score: 147.902 bits (372), Expect = 1.646e-42 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 KVYVGNLP D+R EVE +F KYGRIK VD+K+ +FAFVE+E RDAEDA+ R+ Y ++G ++VE ++G G G R GG + R G + T +RV V GLP + SWQDLKDHM+ AGDV YADV RDGTGV ++ +D+KYA++ LDD++ +++ G+ Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRG-------GGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 188
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Match: rsp-3 (Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]) HSP 1 Score: 147.902 bits (372), Expect = 1.646e-42 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 KVYVGNLP D+R EVE +F KYGRIK VD+K+ +FAFVE+E RDAEDA+ R+ Y ++G ++VE ++G G G R GG + R G + T +RV V GLP + SWQDLKDHM+ AGDV YADV RDGTGV ++ +D+KYA++ LDD++ +++ G+ Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRG-------GGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 188
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Match: rsp-3 (Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]) HSP 1 Score: 147.902 bits (372), Expect = 1.646e-42 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 KVYVGNLP D+R EVE +F KYGRIK VD+K+ +FAFVE+E RDAEDA+ R+ Y ++G ++VE ++G G G R GG + R G + T +RV V GLP + SWQDLKDHM+ AGDV YADV RDGTGV ++ +D+KYA++ LDD++ +++ G+ Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRG-------GGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 188
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Match: SF2 (gene:FBgn0283477 transcript:FBtr0083272) HSP 1 Score: 155.992 bits (393), Expect = 1.894e-45 Identity = 80/189 (42.33%), Postives = 117/189 (61.90%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVG 654 ++YVGNLP DIR +++ +F K+G++ VD+KNR FAFVE+E +RDA+DA+ R+ Y Y+G+ L+VE +G G G G P A K +++RV V+GLP S SWQDLKDHM+ AGDV +AD ++DG+GV ++L +D+KYA+K LDDS +++ G+V Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGG--------GRMGGRGPPA-----KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVA 182
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Match: SF2 (gene:FBgn0283477 transcript:FBtr0304727) HSP 1 Score: 155.992 bits (393), Expect = 1.894e-45 Identity = 80/189 (42.33%), Postives = 117/189 (61.90%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVG 654 ++YVGNLP DIR +++ +F K+G++ VD+KNR FAFVE+E +RDA+DA+ R+ Y Y+G+ L+VE +G G G G P A K +++RV V+GLP S SWQDLKDHM+ AGDV +AD ++DG+GV ++L +D+KYA+K LDDS +++ G+V Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGG--------GRMGGRGPPA-----KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVA 182
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Match: B52 (gene:FBgn0004587 transcript:FBtr0082802) HSP 1 Score: 99.7525 bits (247), Expect = 1.227e-23 Identity = 66/187 (35.29%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 ++VYVG LP +R ++E FK YGR +D+ +KN + FVE+E RDA+DA++ N G + VE ++G+ R G R G + + + +G + TE+R+ V L SWQDLKD+M+ AG+V+YAD R GV ++ + D+K A++ LDD+EL R Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN----GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLR-TEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR 185
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Match: B52 (gene:FBgn0004587 transcript:FBtr0308197) HSP 1 Score: 99.3673 bits (246), Expect = 2.174e-23 Identity = 66/187 (35.29%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 ++VYVG LP +R ++E FK YGR +D+ +KN + FVE+E RDA+DA++ N G + VE ++G+ R G R G + + + +G + TE+R+ V L SWQDLKD+M+ AG+V+YAD R GV ++ + D+K A++ LDD+EL R Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN----GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLR-TEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR 185
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Match: B52 (gene:FBgn0004587 transcript:FBtr0308195) HSP 1 Score: 99.3673 bits (246), Expect = 2.174e-23 Identity = 66/187 (35.29%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 ++VYVG LP +R ++E FK YGR +D+ +KN + FVE+E RDA+DA++ N G + VE ++G+ R G R G + + + +G + TE+R+ V L SWQDLKD+M+ AG+V+YAD R GV ++ + D+K A++ LDD+EL R Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN----GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLR-TEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR 185
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Match: srsf1b (serine and arginine rich splicing factor 1b [Source:NCBI gene;Acc:393565]) HSP 1 Score: 166.777 bits (421), Expect = 1.123e-49 Identity = 88/188 (46.81%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GG G +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPR-----------------GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 185
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Match: srsf1a (serine and arginine rich splicing factor 1a [Source:NCBI gene;Acc:406288]) HSP 1 Score: 161.77 bits (408), Expect = 1.478e-47 Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++ R+ Y Y+G+ L+VE + G G GGGG G G G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYG-------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 195
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Match: srsf1a (serine and arginine rich splicing factor 1a [Source:NCBI gene;Acc:406288]) HSP 1 Score: 161.77 bits (408), Expect = 1.478e-47 Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++ R+ Y Y+G+ L+VE + G G GGGG G G G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYG-------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 195
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Match: srsf1a (serine and arginine rich splicing factor 1a [Source:NCBI gene;Acc:406288]) HSP 1 Score: 159.458 bits (402), Expect = 1.844e-47 Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTY 639 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++ R+ Y Y+G+ L+VE + G G GGGG G G G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYG-------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 192
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Match: srsf1a (serine and arginine rich splicing factor 1a [Source:NCBI gene;Acc:406288]) HSP 1 Score: 160.229 bits (404), Expect = 3.400e-47 Identity = 88/188 (46.81%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++ R+ Y Y+G+ L+VE + G G GGGG R S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGRYG--------------------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 182
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Match: tent5a (terminal nucleotidyltransferase 5A [Source:Xenbase;Acc:XB-GENE-5843475]) HSP 1 Score: 167.162 bits (422), Expect = 2.406e-49 Identity = 94/191 (49.21%), Postives = 131/191 (68.59%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKX-XXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKA-FGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP DIR ++E VF KYG I+D+D+KN R FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G+ G G GGGG G G G G P+ +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGET 206
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Match: tent5a (terminal nucleotidyltransferase 5A [Source:Xenbase;Acc:XB-GENE-5843475]) HSP 1 Score: 166.777 bits (421), Expect = 2.766e-49 Identity = 94/191 (49.21%), Postives = 131/191 (68.59%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKX-XXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKA-FGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP DIR ++E VF KYG I+D+D+KN R FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G+ G G GGGG G G G G P+ +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGET 206
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Match: lhx3 (LIM homeobox 3 [Source:Xenbase;Acc:XB-GENE-490075]) HSP 1 Score: 150.599 bits (379), Expect = 1.451e-43 Identity = 79/190 (41.58%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESS---FAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP+DIR E+E +F +YGRI+ +++KNR SS FAF+ ++ RDAEDA+ RN Y + L+VE + GG GS G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADV +DG G+ +++ ++D++YAL+ LDD++ +++ G+ Sbjct: 17 RIYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAPFAFISFQDPRDAEDAVFARNGYEFGSCRLRVEFPRSFRGSGGGYGGSRGRNG-----------------------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDGMGIVEFIRKEDMEYALRKLDDTKFRSHEGET 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Match: fnbp1l (formin binding protein 1 like [Source:Xenbase;Acc:XB-GENE-489112]) HSP 1 Score: 91.2781 bits (225), Expect = 7.502e-21 Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRD--GTGVCDYLNEDDLKYALKTLDDSEL 630 +V++G L R +VE FK YGRI+++++KN F FVE++ RDA+DA++ N + +E ++ G G GGGG R Y NSG P +G + TE R+ V L SWQDLKD M+ AG+V+Y D R GV ++ + D+K AL LD EL Sbjct: 4 CRVFIGRLSPHARERDVEKFFKGYGRIREINLKN----GFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGG---PSRYGPPVR-TEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYTDMKNALDKLDGVEL 178
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Match: fnbp1l (formin binding protein 1 like [Source:Xenbase;Acc:XB-GENE-489112]) HSP 1 Score: 91.2781 bits (225), Expect = 8.497e-21 Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRD--GTGVCDYLNEDDLKYALKTLDDSEL 630 +V++G L R +VE FK YGRI+++++KN F FVE++ RDA+DA++ N + +E ++ G G GGGG R Y NSG P +G + TE R+ V L SWQDLKD M+ AG+V+Y D R GV ++ + D+K AL LD EL Sbjct: 4 CRVFIGRLSPHARERDVEKFFKGYGRIREINLKN----GFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGG---PSRYGPPVR-TEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYTDMKNALDKLDGVEL 178
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Match: Srsf9 (serine/arginine-rich splicing factor 9 [Source:MGI Symbol;Acc:MGI:104896]) HSP 1 Score: 160.614 bits (405), Expect = 1.384e-47 Identity = 82/190 (43.16%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAF--GTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLPSD+R ++E +F KYGRI+++++KNR FAFV +E RDAEDAI+GRN Y Y L+VE + G G P+ G ++ ++FRV VSGLP S SWQDLKDHM+ AGDV YADV +DG G+ +YL ++D++YAL+ LDD++ +++ G+ Sbjct: 16 RIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------------GGRGGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGET 178
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Match: Srsf1 (serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]) HSP 1 Score: 158.303 bits (399), Expect = 2.225e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Match: Srsf1 (serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]) HSP 1 Score: 158.303 bits (399), Expect = 2.225e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Match: Srsf1 (serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]) HSP 1 Score: 158.303 bits (399), Expect = 2.504e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Match: Srsf1 (serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]) HSP 1 Score: 158.303 bits (399), Expect = 2.504e-46 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Match: sp|Q6NYA0|SRS1B_DANRE (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.478e-49 Identity = 88/188 (46.81%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GG G +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPR-----------------GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 185
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Match: sp|Q6DII2|SRSF1_XENTR (Serine/arginine-rich splicing factor 1 OS=Xenopus tropicalis OX=8364 GN=srsf1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.466e-48 Identity = 94/191 (49.21%), Postives = 131/191 (68.59%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKX-XXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKA-FGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP DIR ++E VF KYG I+D+D+KN R FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G+ G G GGGG G G G G P+ +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGET 206
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Match: sp|Q5ZML3|SRSF1_CHICK (Serine/arginine-rich splicing factor 1 OS=Gallus gallus OX=9031 GN=SRSF1 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.495e-47 Identity = 88/188 (46.81%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR ++E VF KYG I+D+D+KNR FAFVE+E RDAEDA++GR+ Y Y+G+ L+VE + G G GGGG G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG-----------------PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 186
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Match: sp|Q5PPI1|SRSF9_RAT (Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus OX=10116 GN=Srsf9 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.192e-47 Identity = 82/190 (43.16%), Postives = 118/190 (62.11%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAF--GTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP+D+R ++E +F KYGRI+++++KNR FAFV +E RDAEDAI+GRN Y Y L+VE + G G P+A G ++ ++FRV VSGLP S SWQDLKDHM+ AGDV YADV +DG G+ +YL ++D++YAL+ LDD++ +++ G+ Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRAY---------------------------GGRGGWPRASRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGET 177
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Match: sp|Q9D0B0|SRSF9_MOUSE (Serine/arginine-rich splicing factor 9 OS=Mus musculus OX=10090 GN=Srsf9 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.681e-47 Identity = 82/190 (43.16%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAF--GTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLPSD+R ++E +F KYGRI+++++KNR FAFV +E RDAEDAI+GRN Y Y L+VE + G G P+ G ++ ++FRV VSGLP S SWQDLKDHM+ AGDV YADV +DG G+ +YL ++D++YAL+ LDD++ +++ G+ Sbjct: 16 RIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------------GGRGGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGET 178
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Match: A0A023FXP3 (Putative alternative splicing factor asf/sf2 rrm superfamily OS=Amblyomma parvum OX=251391 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 8.372e-50 Identity = 91/195 (46.67%), Postives = 127/195 (65.13%), Query Frame = 1 Query: 70 MSY-GRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 MS+ G ++YVGNLP DIR+ ++E +F K+G+I +D+KNR FAFVE++ RDAEDA+H R+ Y Y+G+ L+VE +GS RG N G G + G ++ +++RV VSGLP S SWQDLKDHM+ AGDV YADVF+DGTGV ++L +D+KYA+K LDDS +++ G+V Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAPGRG---------------------NMGPG---RGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Match: A0A3M7PKH7 (Serine arginine-rich splicing factor 1B OS=Brachionus plicatilis OX=10195 GN=BpHYR1_045416 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.155e-49 Identity = 86/190 (45.26%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 82 RSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 + T++Y+GNLP DIR E+E +F KYG+IK +D+KNR FAFVE+E + DAEDA+ GR+NY YEGH L+VE K RN G+G P++ G ++ +++R ++GLP + SWQDLKDHM+ AG V YADVF+DGTGV +++ +D+KYALK LDD++ +++ G+ Sbjct: 3 KDTRIYIGNLPQDIRTKEIEDLFYKYGKIKYIDLKNRKGPPFAFVEFEDALDAEDAVRGRDNYLYEGHKLRVEFQK-------------------------GPRNRGAGG-PRS-GPPTRRSDYRCIITGLPPTGSWQDLKDHMREAGTVCYADVFKDGTGVVEFVRYEDMKYALKNLDDTKFRSHEGET 165
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Match: F0J9C5 (Alternative splicing factor ASF/SF2 (Fragment) OS=Amblyomma variegatum OX=34610 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.500e-49 Identity = 88/195 (45.13%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 70 MSY-GRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 MS+ G ++YVGNLP DIR+ ++E +F K+G+I +D+KNR FAFVE++ RDAEDA+H R+ Y Y+G+ L+VE +GS GS + G ++ +++RV VSGLP S SWQDLKDHM+ AGDV YADVF+DGTGV ++L +D+KYA+K LDDS +++ G+V Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAP------------------------GRGSMGPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Match: A0A1E1XHY3 (Putative alternative splicing factor asf/sf2 OS=Amblyomma aureolatum OX=187763 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.632e-49 Identity = 88/195 (45.13%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 70 MSY-GRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 MS+ G ++YVGNLP DIR+ ++E +F K+G+I +D+KNR FAFVE++ RDAEDA+H R+ Y Y+G+ L+VE +GS GS + G ++ +++RV VSGLP S SWQDLKDHM+ AGDV YADVF+DGTGV ++L +D+KYA+K LDDS +++ G+V Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAP------------------------GRGSMGPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Match: A0A023GG86 (Putative alternative splicing factor asf/sf2 rrm superfamily OS=Amblyomma triste OX=251400 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.632e-49 Identity = 88/195 (45.13%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 70 MSY-GRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 MS+ G ++YVGNLP DIR+ ++E +F K+G+I +D+KNR FAFVE++ RDAEDA+H R+ Y Y+G+ L+VE +GS GS + G ++ +++RV VSGLP S SWQDLKDHM+ AGDV YADVF+DGTGV ++L +D+KYA+K LDDS +++ G+V Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAP------------------------GRGSMGPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKDGTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Match: srsf1a (serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:103029385]) HSP 1 Score: 166.007 bits (419), Expect = 1.987e-49 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAFVE+E RDAEDA++ R+ Y Y+G+ L+VE + G G GGGG R +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGAGGAPR------------GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 190
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Match: srsf9 (serine/arginine-rich splicing factor 9 [Source:NCBI gene;Acc:103033517]) HSP 1 Score: 147.902 bits (372), Expect = 1.889e-42 Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVG 654 ++YVGNLP D++ ++E +F KYG+I+D+++KN R FAFV +E RDAEDA++GRN Y + L+VE + SGS GG G GGG S+ +EFRV V+GLP + SWQDLKDHM+ AGDV +ADV RDG GV ++L +D++YAL+ LD +E ++++G+ Sbjct: 5 RIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVYGRNGYGFGDCKLRVEYPRSSGSKFGGSVGGGGGPRGRFG-------------------PPSRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDGTEFRSHQGETA 174
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Match: srsf9 (serine/arginine-rich splicing factor 9 [Source:NCBI gene;Acc:103033517]) HSP 1 Score: 120.168 bits (300), Expect = 4.915e-32 Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVK-NRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVG 654 ++YVGNLP D++ ++E +F KYG+I+D+++K NR FAFV +E RDAEDA++GRN Y + L+VE + SGS GG G GGG S+ +EFRV V+G KDHM+ AGDV +ADV RDG GV ++L +D++YAL+ LD +E ++++G+ Sbjct: 5 RIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVYGRNGYGFGDCKLRVEYPRSSGSKFGGSVGGGGGPRGRFG-------------------PPSRRSEFRVIVTGR--------SKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDGTEFRSHQGETA 166
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Match: srsf1b (serine and arginine rich splicing factor 1b [Source:NCBI gene;Acc:393565]) HSP 1 Score: 110.538 bits (275), Expect = 1.389e-28 Identity = 61/145 (42.07%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 229 SRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 SRDAEDA++GR+ Y Y+G+ L+VE + G R G G G +G S+ +E+RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 12 SRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRDGYDYDGYRLRVEFPRSGRGGGRGGVGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 156
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Match: srsf6a (serine and arginine rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]) HSP 1 Score: 90.5077 bits (223), Expect = 4.630e-20 Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGT--GVCDYLNEDDLKYALKTLDDSEL 630 +VY+G L +R +++ F YG++ +VD+KN + FVE+E +RDA+DA++ N G + VE ++G DR G G G G S G SG +G + TE+R+ V L SWQDLKD M+ AG+V+YAD ++ T GV ++ ++ D++ AL+ LD +++ Sbjct: 3 RVYIGRLSYHVREKDIQRFFGGYGKLLEVDLKN----GYGFVEFEDTRDADDAVYELNGKELCGERVMVEHARGPRRDRDGYGGGGYYGGGRSKCGYSSRSRSGRDK----YGPPVR-TEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMRRALEKLDGTDI 175
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Match: SRSF5 (serine and arginine rich splicing factor 5 [Source:HGNC Symbol;Acc:HGNC:10787]) HSP 1 Score: 83.5741 bits (205), Expect = 8.351e-19 Identity = 53/183 (28.96%), Postives = 87/183 (47.54%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKS-TEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFR--DGTGVCDYLNEDDLKYALKTLDDSEL 630 +V++ L +R +VE FK YG+I+D+D+K + F FVE++ RDA+DA+ N + VE ++ + R S + S T+ R+ V L + SWQDLKD+M+ AG+V++AD R GV ++ +D+K A+ L+ E+ Sbjct: 6 RVFIARLGPHVRTKDVEKFFKGYGKIRDIDIK----AGFGFVEFDDCRDADDAVSDLNGRELNNERMTVEHARAPRARGDRMDTFVRRPSGPPPTYRPRGGGPSSSSASSGGRYGPPSRTDHRLVVENLSSTVSWQDLKDYMRQAGEVTFADAHRIHQNVGVVEFATRNDMKNAIDKLNGKEI 184
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010377.1 (pep scaffold:Pmarinus_7.0:GL481287:28:8451:-1 gene:ENSPMAG00000009397.1 transcript:ENSPMAT00000010377.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 80.8777 bits (198), Expect = 5.483e-18 Identity = 63/181 (34.81%), Postives = 99/181 (54.70%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSEL 630 +++Y+GNL R ++E FK YG+I ++ +K+ F FVE++ +RDA DA+ + G + +E ++G D G G GGGG GS + G P+ T++R+ V + SWQDLKD+M+ AG+V+YADV R GV ++L D++ AL LD S++ Sbjct: 2 SRIYLGNLSYRARDKDIERFFKGYGKIVEISIKH----GFGFVEFDDTRDANDAVCELSGRELCGERVVIEHARGPKRDLHGYGGGGGGGGGGSSSSGGGYGGM-HGPPPR--------TDYRLVVENVSSRCSWQDLKDYMRQAGEVTYADV-RGDEGVVEFLTYADMRRALDKLDGSDM 168
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Match: srsf3a (serine and arginine rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]) HSP 1 Score: 51.6026 bits (122), Expect = 2.533e-8 Identity = 31/73 (42.47%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMS 306 KVYVGNL ++ E+E F YG ++ V V RA FAFVE+E RDA DA+ + G ++VE S Sbjct: 15 CKVYVGNLGNNGNKAELERSFSYYGPLRSVWVA-RAPPGFAFVEFEDPRDAGDAVRELDGRTLCGSRVRVEHS 86
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006373.1 (pep scaffold:Pmarinus_7.0:GL478975:164155:166212:-1 gene:ENSPMAG00000005755.1 transcript:ENSPMAT00000006373.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.9878 bits (123), Expect = 4.647e-8 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMS 306 KVYVGNL S ++E VF YG ++ V V R FAFV++E +RDA D+ + G ++VEMS Sbjct: 15 CKVYVGNLGSGATEYDLEKVFSYYGPLRSVWVA-RNPPGFAFVQFEDARDARDSCRELDGRLVCGSRVRVEMS 86
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Match: srsf7a (serine and arginine rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]) HSP 1 Score: 50.0618 bits (118), Expect = 1.059e-7 Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 1 Query: 100 VGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMS 306 VGNL + E+ F YG +++V V R + AFVEYE +RDAEDA+ G + G + VEMS Sbjct: 1 VGNLGTRAAKGELWQAFGYYGALRNVWVA-RNPPAVAFVEYEDTRDAEDAVRGLDGRLLCGSRVSVEMS 68
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Yeast
Match: NPL3 (RNA-binding protein; promotes elongation, regulates termination, and carries poly(A) mRNA from nucleus to cytoplasm; represses translation initiation by binding eIF4G; required for pre-mRNA splicing; interacts with E3 ubiquitin ligase Bre1p, linking histone ubiquitination to mRNA processing; may have role in telomere maintenance; dissociation from mRNAs promoted by Mtr10p; phosphorylated by Sky1p in cytoplasm; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000002840]) HSP 1 Score: 60.077 bits (144), Expect = 1.145e-10 Identity = 47/193 (24.35%), Postives = 84/193 (43.52%), Query Frame = 1 Query: 85 STKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKA-AGDVSYADVFR---DGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 +T+++V P D++ +E+ +F +G +K+V + N FAFVE+E + A AI + + L+V SK + +R+ + LP+ SWQDLKD + + + +++ V DGTG ++ +E+ L AL+ L++ E +RG V Sbjct: 124 NTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILN----GFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYSKL------------------------------------------PAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIE---FRGSV 267
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Match: EDO44646 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVI6]) HSP 1 Score: 158.688 bits (400), Expect = 2.129e-47 Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR--AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 +VYVGNLP D+R ++ +F KYG I DVD+KNR A FAFVE+E RDAEDA+ GR+ + ++G+ ++VE + GSG P+ ++FRV+VSGLP + SWQDLKDHM+ AGDV + DVF+DGTGV ++ DD+K+A++ LDDS+ +++ G+ Sbjct: 9 CRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRDGHEFDGYRIRVEFPR-----------------------------GGSGPPPR-------RSDFRVQVSGLPPTGSWQDLKDHMREAGDVLFTDVFKDGTGVVEFARYDDMKFAIRNLDDSKFRSHEGET 162
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Match: EDO39290 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAJ5]) HSP 1 Score: 90.8929 bits (224), Expect = 7.049e-22 Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKS-------------TEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSEL 630 +++++G LP D+R ++VE + YG+I+D+ +K + FVE++ RDAEDA+H N G + VE SK R+ G G + F + T + V V L SWQDLKD+ + G V+YAD R G GV ++ ++DDL A++ LDD+EL Sbjct: 2 SRIFLGRLPRDVRESDVEKFLRGYGKIRDISLKR----GYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSK-------------------------GRRSEGGGRDRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTEL 168
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Match: EDO32443 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV28]) HSP 1 Score: 90.1225 bits (222), Expect = 9.729e-22 Identity = 59/185 (31.89%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 82 RSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSEL 630 RST+VY G LP D R ++E + YGR++++ +K + FVE++ RDA+D ++ N G + VE S+ +S G P TE R+ V L ++WQDLK++M G+V++AD R G GV ++ +DD+K ALK LDD+E Sbjct: 3 RSTRVYFGRLPRDCRERDLEKFVRGYGRVREISMK----LGYGFVEFDDYRDADDCVYDLNGRNLLGERVVVEHSRNPSRGSDYGYRRDSSSRSR---------SSRRGRTPPI------RTEHRLAVENLSSRSNWQDLKEYMGKVGEVTFADAHKRRQGEGVVEFATKDDMKTALKKLDDTEF 168
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Match: EDO47776 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL13]) HSP 1 Score: 87.4261 bits (215), Expect = 9.114e-21 Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRD--GTGVCDYLNEDDLKYALKTLDDSEL 630 +V+VG LP ++E FK +GRI D+++K FAFVE++ +RDA+DA++ N+ G + VE + S GG P+ +TE+R+ V L A WQDLKD+M+ AG+V++ +D G GVCD+ NE D+ YALK LD +EL Sbjct: 7 RVFVGRLPPRANDRDLEKFFKGFGRINDINLK----QGFAFVEFDDARDADDAVYELNHKELLGERVSVEHAHPSRGGGGGGGRGFRDRS------------------PRRDRYPPYNTEYRLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVGEGVCDFSNESDMLYALKKLDGTEL 166
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Match: EDO47549 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RM69]) HSP 1 Score: 84.3445 bits (207), Expect = 9.403e-20 Identity = 63/193 (32.64%), Postives = 96/193 (49.74%), Query Frame = 1 Query: 85 STKVYVGNLPSDIRANEVESVFKKYGR--IKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKA---FGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 S +VY+G LP R ++V+ F YGR I+++ +K+ + FVE++ S DAEDA++ N + G + VE ++G+ SG R +A +G + T +R+ V L SWQDLKD+ + GDV+Y D + G GV ++ + DLK AL+ LD ELK R Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD----GYGFVEFDYSDDAEDAVYECNGKKMLGERILVEPARGTSKG-----------------------GYSSGRRGRARDKYGPPLR-TPWRMTVENLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQGEGVIEFATKKDLKKALRKLDGKELKGKR 166
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Match: srsf1a (serine/arginine-rich splicing factor 1 [Source:NCBI gene;Acc:101162697]) HSP 1 Score: 166.392 bits (420), Expect = 1.406e-49 Identity = 88/189 (46.56%), Postives = 126/189 (66.67%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKA-FGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGD 648 ++YVGNLP DIR +VE VF KYG I+D+D+KNR FAF+E+E RDA+DA++GR+ Y Y+G+ L+VE + RGG G GG P+ +G S+ +E+RV VSGLPQS SWQDLKDHM+ AGDV YADV+RDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 14 CRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGA--------------------PRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 182
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Match: ENSORLT00000006699.2 (serine/arginine-rich splicing factor 1B [Source:NCBI gene;Acc:101171767]) HSP 1 Score: 164.466 bits (415), Expect = 1.150e-48 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++YVGNLP DIR+ +VE +F KYG I+D+D+KNR FAFV++E RDAEDA++GR+ Y Y+G+ L+VE + GG G GGG +G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ G+ Sbjct: 15 CRIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGMGPPR----------------GRYGPPSRRSENRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGET 187
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Match: ENSORLT00000038036.1 (serine/arginine-rich splicing factor 1B [Source:NCBI gene;Acc:101171767]) HSP 1 Score: 161.77 bits (408), Expect = 9.976e-48 Identity = 86/185 (46.49%), Postives = 121/185 (65.41%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNR-AESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTY 639 ++YVGNLP DIR+ +VE +F KYG I+D+D+KNR FAFV++E RDAEDA++GR+ Y Y+G+ L+VE + GG G GGG +G S+ +E RV VSGLP S SWQDLKDHM+ AGDV YADVFRDGTGV +++ ++D+ YA++ LD+++ +++ Sbjct: 15 CRIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGMGPPR----------------GRYGPPSRRSENRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Match: srsf9 (serine/arginine-rich splicing factor 9 [Source:NCBI gene;Acc:101164733]) HSP 1 Score: 150.984 bits (380), Expect = 9.454e-44 Identity = 75/188 (39.89%), Postives = 116/188 (61.70%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 ++Y+GNLP D++ ++E +F KYG+I+++++KN R FAF+ +E RDA+DA++GRN Y Y L+VE + +G G G FG ++ +EFRV V+GLP + SWQDLKDHM+ AGDV +ADV RDG GV ++L +D++YAL+ LD +E ++++G+ Sbjct: 5 RIYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGYVYGNSKLRVEYPRSTGGKPTPMGPGGAGPR-------------------GRFGPPTRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDRTEFRSHQGET 173
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Match: srsf9 (serine/arginine-rich splicing factor 9 [Source:NCBI gene;Acc:101164733]) HSP 1 Score: 149.443 bits (376), Expect = 4.571e-43 Identity = 78/194 (40.21%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 64 SKMSYGRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKN-RAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 S M+ GR +Y+GNLP D++ ++E +F KYG+I+++++KN R FAF+ +E RDA+DA++GRN Y Y L+VE + +G G G FG ++ +EFRV V+GLP + SWQDLKDHM+ AGDV +ADV RDG GV ++L +D++YAL+ LD +E ++++ Sbjct: 9 STMTDGR---IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGYVYGNSKLRVEYPRSTGGKPTPMGPGGAGPR-------------------GRFGPPTRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDRTEFRSHQ 180
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Match: SMESG000075205.1 (SMESG000075205.1) HSP 1 Score: 330.872 bits (847), Expect = 3.877e-114 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 Query: 70 MSYGRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYSPK 765 MSYGRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKGSGSDRGGRRGSGGGGYRGSYNGRYDDRNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVGRIRLERDSRGGRRSRSRSRSRSESPKRYRRSPNYSPK Sbjct: 1 MSYGRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKGSGSDRGGRRGSGGGGYRGSYNGRYDDRNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDVGRIRLERDSRGGRRSRSRSRSRSESPKRYRRSPNYSPK 232
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Match: SMESG000077573.1 (SMESG000077573.1) HSP 1 Score: 172.94 bits (437), Expect = 2.072e-52 Identity = 86/187 (45.99%), Postives = 126/187 (67.38%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKTYRGDV 651 K+YVGNLP DIR +++ +F K+G+I D+D+K+R + FAF+E++ RDAEDA+ GRN Y Y+G+ L+VE +G+ + G + + N+ S S+ +EFRV VSGLP + SWQDLKDHM+ AGDV +ADVFRDGTGVC++L +D+KYA+K LDD++ K++ G++ Sbjct: 11 KLYVGNLPPDIRHRDLDDLFYKFGKIVDIDIKDRKKPPFAFIEFDDPRDAEDAVTGRNGYNYDGYRLRVEFPRGNNENAGNFYSNRKAEEKNLTR------NTTSA--------PSRRSEFRVYVSGLPPTGSWQDLKDHMREAGDVGHADVFRDGTGVCEFLRVEDMKYAIKHLDDTKFKSHEGEI 183
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Match: SMESG000045501.1 (SMESG000045501.1) HSP 1 Score: 96.6709 bits (239), Expect = 1.782e-22 Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADV--FRDGTGVCDYLNEDDLKYALKTLDDSELKTYR 642 ++YVGNLP I +++ F++YGRI+ VD+KN + FVE + RDAEDA+H + + G + VEM++ + G R G G RG N + S +R + K +E R+ V+ L SWQDLKD M+ G+V++AD R GV ++ N D+K A++ D EL Y+ Sbjct: 3 RLYVGNLPRRIEERDIKKFFREYGRIRSVDIKN----GYGFVEIDDRRDAEDAVHDLDGSKLLGERVTVEMARSNARFGGDRGSGGDRGGRGFDNRNNRYDSRDSRDRYNS--RKPIRSEHRIIVNDLSSRVSWQDLKDLMRKVGEVTFADAHKLRPNQGVVEFSNSSDMKAAIEKYDGYELYGYK 182
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Match: SMESG000013050.1 (SMESG000013050.1) HSP 1 Score: 84.7297 bits (208), Expect = 4.569e-19 Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 397 SGSGNRPKAFGTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVFRDGTGVCDYLNEDDLKYALKTLDDSELKT 636 S RP+ KST++RV +S +P ++WQD+KD M+ GDVSYADVF +GTGVCD+++++D +Y LK +++ + KT Sbjct: 138 SYQNRRPRP----PKSTDYRVFISNIPPYSNWQDIKDFMRRYGDVSYADVFGNGTGVCDFVSKEDFRYVLKYVNNVKFKT 213 HSP 2 Score: 80.4925 bits (197), Expect = 1.586e-17 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 91 KVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSK 309 K+YVGNLP D + ++E +F +G+I D+D+KNR FAF++++ RDAEDAI R+NY +G +L+VE + Sbjct: 6 KIYVGNLPPDSTSRDIEKLFSCFGKIIDIDIKNRNGPPFAFIQFDDRRDAEDAIRERDNYDLDGFSLRVEFPR 78
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Match: SMESG000015564.1 (SMESG000015564.1) HSP 1 Score: 86.2705 bits (212), Expect = 5.978e-19 Identity = 59/191 (30.89%), Postives = 88/191 (46.07%), Query Frame = 1 Query: 88 TKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEYESSRDAEDAIHGRNNYRYEGHTLKVEMSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSGNR-PKAF-------GTKSKSTEFRVRVSGLPQSASWQDLKDHMKAAGDVSYADVF--RDGTGVCDYLNEDDLKYALKTLDDSEL 630 +V++G L +VE FK YGRIKD+ R +S + FVE+++ RDA+DAIH ++ G + +E ++ SG R P+ F G T++R+ V LP SWQDLKD M+ G+V +AD R G+ ++ D+K ALK D E+ Sbjct: 2 ARVFIGRLSDRASERDVERFFKGYGRIKDI----RLKSGYGFVEFDNERDADDAIHDLHHKELAGGRVVLEHAR-------------------------------SGRRSPRRFDSSRRFAGNAPIRTDYRLLVENLPSRVSWQDLKDLMRKTGEVMFADAHKRRQNEGIVEFKTRADMKAALKKFDGYEI 157 The following BLAST results are available for this feature:
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Serine/arginine-rich splicing factor 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005206 ID=SMED30005206|Name=Serine/arginine-rich splicing factor 1|organism=Schmidtea mediterranea sexual|type=transcript|length=979bpback to top protein sequence of SMED30005206-orf-1 >SMED30005206-orf-1 ID=SMED30005206-orf-1|Name=SMED30005206-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=248bp MSYGRSTKVYVGNLPSDIRANEVESVFKKYGRIKDVDVKNRAESSFAFVEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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