Leucine-rich repeat-containing protein 40
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Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30005091 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRC40 (leucine rich repeat containing 40 [Source:HGNC Symbol;Acc:HGNC:26004]) HSP 1 Score: 275.789 bits (704), Expect = 2.745e-82 Identity = 196/613 (31.97%), Postives = 331/613 (54.00%), Query Frame = 3
Query: 150 ARISPPNNEQVSFAFKVPGKN--------IIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+R+ + + FK G++ ++ ARK+G L L E+P ++ IN P++ F + +R WWE LTKL +S+N ++ +++D+R L L LD+ +N L ++P I +L L+ LN+S NK+ +LPE I L +L+ + L +N L + F +L +LE LDLSNN + +P + + L RL++S N+L+ LP I ++K L + D + N + P +L S E+L + N + P LKELH+ NQI L + H+ ++ +I +L + N + +P+EII L+ L +LD+S N++ S+PY+LGN+ L+ L ++GNP R+I R I+ GT+ + +YLR++ +D S A ++ SE+ ++ H + + LD S++ T IP+ F+ K + +N N+L E P ++ + +DLSFN+L +S L L+L N+L +LPE ++ L T+ ++ N + LPEV++ + L+ + S + ++P+ ++ LT LDL NN++ IPPE G C +++ LDGN R P + GT + EYLR +I
Sbjct: 2 SRLKRIAGQDLRAGFKAGGRDCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNL-SFGATER--WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIK-DDGPSQSESATETAMTLPSES-------RVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVR-LQTINLSFNRFKM-LPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 600 HSP 2 Score: 82.0333 bits (201), Expect = 1.485e-15 Identity = 100/357 (28.01%), Postives = 160/357 (44.82%), Query Frame = 3
Query: 918 LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN---------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
L +L I NN++ +L+ + +P + +L I N + LP+ I +L+ L +L+VS N L +P + N+ L+ L + N T I+ G E L SN+ED LDLSN ++T++P ++ L ++ NL N+L P I + + LD + N L + SL+ L L N LR LPE F + + L L V N + + E +LK+LN+ I++++ P + L+ L LDLSNN+I +P G H+K L+GN +R +S GT+ V +YLRS+I+ +
Sbjct: 84 LTKLIISNNKLQSLTD-DLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNEL-----TCISEGFEQL-------SNLED--------------------------------------LDLSNNHLTTVPASFSSLSSLVRL---NLSSNELKSLPAEI-NRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPE-FPSC-SLLKELHVGENQIEMLEAE------HLKHLNS----ILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 372
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRD1 (leucine rich repeats and death domain containing 1 [Source:HGNC Symbol;Acc:HGNC:34300]) HSP 1 Score: 125.561 bits (314), Expect = 6.371e-29 Identity = 131/472 (27.75%), Postives = 215/472 (45.55%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIR 1886
++P EI L LR LN+S N I+ +P+ I L +++Q+ NN ++ P++ L +LE+L L N+ HIPD + + L+ L++ YN+L PK +C L LI D++ N IS PK++ + E L ++ N +T V +KEL + +N++ +S I + IL + KN + +P +I L L +S N L +P + ++ L+ L V+ R+NM IT S LN+ SL+ S IT +P E+ +KI + L +NK++ FP+G+ CA SL L++NGNY+ +P + K L+ LE++ N L L E +L+NLKYL+ I I P + + L L L N+ E P E E++++ +L N+++
Sbjct: 202 SLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISH-KIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVN-------------------------RNNMVKITDCIS-------------------------HLNNICSLEFSGNIITDVP---IEIKNCQKIIKIELSYNKIMYFPLGL--CALD----------------------SLYYLSVNGNYISEIPVDISFSKQLLH-LELSENKL-LIFSEHFCSLINLKYLDLGKNQIKKI-PASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQ 592 HSP 2 Score: 102.834 bits (255), Expect = 7.999e-22 Identity = 155/600 (25.83%), Postives = 257/600 (42.83%), Query Frame = 3
Query: 240 TLTLINFGFDEIPTDIYNINRP-----DKRRIG-YEGFDSEDRN-----SWWEDVL------------LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIG-----------------------NFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN--TLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
T+ L G E P DI I DK +I ++G DS D S E+ L L L++S NHI + ++I L N+ L NN ++ P ++ L L L+L KNK+ +P+++ +L L+ + L N L P C L L LDL+ N S +P I +K+K L ++ NKLE + I + L + +N + P+ + A E L ++ N +T P + +L +L++LH++ N + ++ IS++ NI L S N + ++P EI + + ++++++S+N + P L +D+L L V+GN I I+ ++L L + F SL L LDL I IP + + + V+ L NK FP + + ++ LDLS N+L ++S + ++ LN + N P +++ LN ++ L LP + N+ LK L+ S AI I P+N L+ L L NN+I +PP ++ NL GN +
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLN-NLRKLHVNRNNMVKITDC-ISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEI-PVDISFSKQLLHLELSENKLLIFSEHFCSLINLKY--------------------------LDLGKNQIKKIPASISNMI---SLHVLILCCNKFETFPRELCTLE-NLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLT-RLPGELSNMTQLKELDISNNAIREI-PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNL 709 HSP 3 Score: 100.908 bits (250), Expect = 2.803e-21 Identity = 120/415 (28.92%), Postives = 190/415 (45.78%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPS---LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLP 1610
+ +L L+ N ++ +S I L L L N LK IP++I A L L+LS NK+T LP+ I LN+L+++ + N + + L ++ L+ S N + +P I N K+ ++ +SYNK+ P +C L +L Y V+ N ISE P D+ S ++L + ++ L S S LK L + NQI + + IS + ++++L + N P E+ L+ L LD+S N L I + N+ +Q L N F I E+ + SL L I+ I+ G ++ L + + LD+SN I IP N EL + N N++ P +LS + L+LS N L L + SLK +N + N L P
Sbjct: 351 IKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA-SISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQF-------IHFPIELCQ--------------LQSLEQLNISQIK---GRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYN---NQISYLPPSLLSLN-DLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNPLLRPP 736 HSP 4 Score: 85.8853 bits (211), Expect = 1.379e-16 Identity = 114/464 (24.57%), Postives = 198/464 (42.67%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEF---SH--------------------IPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNK-----------------------ISEFPKDLDASFEVLKVNI--NMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLN 1724
T P +C L +L L+L+ N I+ LP+ I L +L+ +++ +N L L E +LL ++ L L++N+ SH IP+ I L+ LS+S NKL +LPK I KL L V++N I++ P ++ +++K+ + N I FP+ SL L ++ N I+ + + IS+ + L +S+N ++ L L LD+ N + IP ++ NM +L VL + N F + R ++ + +L L + + N + + D L L+ S+ P +L +++ + + KL P G LS + LD+S N + E+ +L +L+ N + LP S ++ N L L ++ N L LP I+N+ +LK +N
Sbjct: 294 TFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEI-PVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPR---------------------ELCTLENLQVLDL------SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLP-GELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSL-NDLQQLNLSGNNLT-ALPSAIYNIFSLKEIN 726
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRD1 (leucine rich repeats and death domain containing 1 [Source:HGNC Symbol;Acc:HGNC:34300]) HSP 1 Score: 125.561 bits (314), Expect = 6.371e-29 Identity = 131/472 (27.75%), Postives = 215/472 (45.55%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIR 1886
++P EI L LR LN+S N I+ +P+ I L +++Q+ NN ++ P++ L +LE+L L N+ HIPD + + L+ L++ YN+L PK +C L LI D++ N IS PK++ + E L ++ N +T V +KEL + +N++ +S I + IL + KN + +P +I L L +S N L +P + ++ L+ L V+ R+NM IT S LN+ SL+ S IT +P E+ +KI + L +NK++ FP+G+ CA SL L++NGNY+ +P + K L+ LE++ N L L E +L+NLKYL+ I I P + + L L L N+ E P E E++++ +L N+++
Sbjct: 202 SLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISH-KIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVN-------------------------RNNMVKITDCIS-------------------------HLNNICSLEFSGNIITDVP---IEIKNCQKIIKIELSYNKIMYFPLGL--CALD----------------------SLYYLSVNGNYISEIPVDISFSKQLLH-LELSENKL-LIFSEHFCSLINLKYLDLGKNQIKKI-PASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQ 592 HSP 2 Score: 102.834 bits (255), Expect = 7.999e-22 Identity = 155/600 (25.83%), Postives = 257/600 (42.83%), Query Frame = 3
Query: 240 TLTLINFGFDEIPTDIYNINRP-----DKRRIG-YEGFDSEDRN-----SWWEDVL------------LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIG-----------------------NFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN--TLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
T+ L G E P DI I DK +I ++G DS D S E+ L L L++S NHI + ++I L N+ L NN ++ P ++ L L L+L KNK+ +P+++ +L L+ + L N L P C L L LDL+ N S +P I +K+K L ++ NKLE + I + L + +N + P+ + A E L ++ N +T P + +L +L++LH++ N + ++ IS++ NI L S N + ++P EI + + ++++++S+N + P L +D+L L V+GN I I+ ++L L + F SL L LDL I IP + + + V+ L NK FP + + ++ LDLS N+L ++S + ++ LN + N P +++ LN ++ L LP + N+ LK L+ S AI I P+N L+ L L NN+I +PP ++ NL GN +
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLN-NLRKLHVNRNNMVKITDC-ISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEI-PVDISFSKQLLHLELSENKLLIFSEHFCSLINLKY--------------------------LDLGKNQIKKIPASISNMI---SLHVLILCCNKFETFPRELCTLE-NLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLT-RLPGELSNMTQLKELDISNNAIREI-PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNL 709 HSP 3 Score: 100.908 bits (250), Expect = 2.803e-21 Identity = 120/415 (28.92%), Postives = 190/415 (45.78%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPS---LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLP 1610
+ +L L+ N ++ +S I L L L N LK IP++I A L L+LS NK+T LP+ I LN+L+++ + N + + L ++ L+ S N + +P I N K+ ++ +SYNK+ P +C L +L Y V+ N ISE P D+ S ++L + ++ L S S LK L + NQI + + IS + ++++L + N P E+ L+ L LD+S N L I + N+ +Q L N F I E+ + SL L I+ I+ G ++ L + + LD+SN I IP N EL + N N++ P +LS + L+LS N L L + SLK +N + N L P
Sbjct: 351 IKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA-SISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQF-------IHFPIELCQ--------------LQSLEQLNISQIK---GRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYN---NQISYLPPSLLSLN-DLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNPLLRPP 736 HSP 4 Score: 85.8853 bits (211), Expect = 1.379e-16 Identity = 114/464 (24.57%), Postives = 198/464 (42.67%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEF---SH--------------------IPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNK-----------------------ISEFPKDLDASFEVLKVNI--NMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLN 1724
T P +C L +L L+L+ N I+ LP+ I L +L+ +++ +N L L E +LL ++ L L++N+ SH IP+ I L+ LS+S NKL +LPK I KL L V++N I++ P ++ +++K+ + N I FP+ SL L ++ N I+ + + IS+ + L +S+N ++ L L LD+ N + IP ++ NM +L VL + N F + R ++ + +L L + + N + + D L L+ S+ P +L +++ + + KL P G LS + LD+S N + E+ +L +L+ N + LP S ++ N L L ++ N L LP I+N+ +LK +N
Sbjct: 294 TFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEI-PVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPR---------------------ELCTLENLQVLDL------SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLP-GELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSL-NDLQQLNLSGNNLT-ALPSAIYNIFSLKEIN 726
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRC1 (leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]) HSP 1 Score: 120.553 bits (301), Expect = 6.008e-28 Identity = 91/280 (32.50%), Postives = 146/280 (52.14%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI 1202
L +LD+S N I ++ E I F L D N L +P+ +L L L+++ + LPE+IG L +L + L NLL LP +L LE LDL NNE ++P++IG + LK L + N+L +LP+ I LK L+ DVS+N++ P+++ S L ++ N++ P + +L L L +D N++T L + ++ L +++N ++ LP I LK L L+ N L S+P +G +L V CV N I ++ TE+
Sbjct: 84 LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLK-KLSILKVDQNRLTQLPE-AVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP-AEVSQATEL 360 HSP 2 Score: 96.2857 bits (238), Expect = 4.130e-20 Identity = 102/381 (26.77%), Postives = 176/381 (46.19%), Query Frame = 3
Query: 579 HLQQIILGNNLLKLLPTEFCRLL-SLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSL--HISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI--------NRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPIN-----SIESEAG--NDISVLHIDAH----------ELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
H++ I + L +P E R SLE L L N+ +P+ +KL++L +S N++++LP I L+ DVS+N+I E P+ + + +V + N +T P S P L+ L + +L SL +I + N+ L + +N + LP+ + L+ L +LD+ N ++++P ++G + L+ L +DGN + N + L+R E+I+ SL L I+ +I G +S+L +D + E S L L+ + ++P++ + K KK+ +N NKLV P I C S+ + NRL + + L L++ GN L LP S T +K
Sbjct: 13 HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPES--FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL------PEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKS---IGKLKKLSNLNADRNKLVSLPKEIGGCC-SLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK 381 HSP 3 Score: 76.2554 bits (186), Expect = 8.942e-14 Identity = 93/329 (28.27%), Postives = 133/329 (40.43%), Query Frame = 3
Query: 897 VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
+ R SL+EL +D NQ+ L + + L +S N + LP EI + LV+LDVS N + IP ++ LQV GNP + SFP L L S+ NDIS + S+PEN L+ ++ L N L P L+ + LDL N + L + + LK L L+GN L LP+ +KN L L+V+ N L LPE I L +L L S + I P +LK L+ L + N + +P G CE + L N++
Sbjct: 31 IYRYARSLEELLLDANQLRELPEQFFQLV-KLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPE------------------------SFPELQNLTCLSV-----NDIS---------------------LQSLPENIGNLYNLASLE---LRENLLTYLPDS-LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLL-CLDVSENRLE-RLPEEISGLTSLTDLVISQNLLETI-PDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQL 301 HSP 4 Score: 73.9442 bits (180), Expect = 5.120e-13 Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 3
Query: 384 LDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA 848
LD+S N ++++ E+I L++L L + N L+TIPD I L +L L + +N++T LPE++G L +++L N L LP +L L L+ N+ +P IG L + N+L ++P + + L DV+ N++ P L A
Sbjct: 225 LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRIQ4 (leucine rich repeats and IQ motif containing 4 [Source:HGNC Symbol;Acc:HGNC:34298]) HSP 1 Score: 113.235 bits (282), Expect = 1.936e-25 Identity = 105/392 (26.79%), Postives = 171/392 (43.62%), Query Frame = 3
Query: 501 DLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISY--IPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPL 1670
+L L L L+ N + LP+ I L++I L N ++ P E C L +LE++DL N+ IP+ IG+ L++ ++ N L LP ++C+ L D+S N + PK ++ ++ ++ L V RL LH+ T L L S+ + N+ L +S+N++ P +I LK L L + N + +P LG++ L++L + GN F S E++ S SL L I G D +T +PE+ +L K++ + N N L P+ + S ++ LD N L +L D +LK L L N L LPE+ ++ N L L + NP+
Sbjct: 140 NLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFP---------------------EEVLSLASLEKLYI-------GQD-------------------QGFKLTYVPEHIRKLQSLKELYIEN---NHLEYLPVSLGSMP-NLEVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVN-LKVLTLMDNPM 479 HSP 2 Score: 108.227 bits (269), Expect = 8.277e-24 Identity = 94/358 (26.26%), Postives = 153/358 (42.74%), Query Frame = 3
Query: 384 LDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKA-----------------------LIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVS--------------------------------------------------RLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSN 1232
L L+ NH+K + ++I + L + L+ N + P E+C L L ++L +NKI +PE IG L LQ+ + +N L +LP C+ L VLDLS+N IP + K+ + +S N+LEK+P+ IC+ + L + D+SQN + P + A + EVL ++ N I P R SLKEL+I+NN + L + + +PN+ +L N + +LP+ I + L +L + N L +P L ++ L+VL + NP + G E + +YL+ N
Sbjct: 147 LGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYL-PVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKENRN 503 HSP 3 Score: 80.1073 bits (196), Expect = 5.476e-15 Identity = 127/503 (25.25%), Postives = 211/503 (41.95%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNE-FSHIPDAIGNFIKLKRLSISYNKLEKLPKNICK-LKALIYFDVSQNKISEFPKDL--DASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNH---FVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL 1964
IP EI +L ++L N+I +P+ I L +++ + L N L+ L L SLE LDLS N FS + L+ L + L+++P I K L L ++ N + PK++ + + N +FP +L+ + +D N+I + I ++ + ++ NN+ LP + L LD+S N LHSIP + + + + + GN + R I T + YL SF L L + + N + + L + L L + I +P EL K+K++ L N+ + FP +LS A S+ L + ++ +L+ V H SLK L + N+L LP S +M N L L+ HN L +LP+ I LK EL L +N + +P ++K+ L N + P + G E +++YL+ N+
Sbjct: 39 AIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE-EIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVPRL-ICRWTSLHLLYLGNTGLHRLRGSFRCLVNLRFLDL---SQNHLHHCPLQICALKNLEVLGLDDNKIGQLPS---ELGSLSKLKILGLTGNEFLSFPEEVLSLA-SLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPN-LEVLDCRHNLLK-QLPDAICQAQALK------------------------ELRLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKENRNRNI 506
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 127.872 bits (320), Expect = 1.720e-30 Identity = 138/515 (26.80%), Postives = 223/515 (43.30%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNT----------------------LNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+IP I +L QL L L KNK+T LP IG L +L+++ L N L LP L SLE LDL +N+ + +P I L+ L + YN++ + + I L L DV +NKI E P + S V V+ N +T P E D + +T L H N++ ELP I L LV++ + +N + IP L + L+ V+ N + + +T +L + + ++T+FP+ P + ST ++++ + I+ IP F K ++ +NL N+LV P+ + S SI L+LS N+L L + V+L+ L L+ N L+ LP + L L V N + L LP I NL +L+ L + I P+ L L L L++N + +P E LC+ ++I +++ + + + G +V +YL+ Q
Sbjct: 159 SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVP---------EEIGDCHSLTQLDLQH--------------NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGP---------------------QQFVSTVTINMEHNQISKIPIGIFS--KATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQ 620 HSP 2 Score: 62.3882 bits (150), Expect = 9.408e-10 Identity = 76/315 (24.13%), Postives = 145/315 (46.03%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGT-LNHLQQIILGNNLLKLLPTE-------------------------FCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFP---KDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFN-NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
LT+LDL N + ++ I L NL+ + ++ N ++ IP E+ QL + N + +LP ++ T L + + L N L P F + L L+L NE +P +G++ + L++S N+L+ LP++I KL L +S N++ + P +L+ E+ + T+ L +L + +N+I TL I + ++ L + +NN+ +P EI L L L ++ N +LH++P+ L +L+++ ++ +P I G ++ +YL+ +
Sbjct: 308 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPR-SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 621 HSP 3 Score: 51.9878 bits (123), Expect = 1.460e-6 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPK--NFMRLKLLTELDLSNNEIEIIPPEFG 1838
LDLS+ ITSIP EL + ++ L NKL P I V+LK L L+ N L +LP+S +++ +L TL++ HN L E+P VI+ + +L+ L Y IV ++ + N +LK+ LD+ N+I +P G
Sbjct: 150 LDLSSIEITSIPSPIKELTQLTEL---FLYKNKLTCLPTEI------------------------GQLVNLKKLGLSENALTSLPDSLASLE-SLETLDLRHNKL-TEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKM---LDVRENKIRELPSAIG 280
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 127.487 bits (319), Expect = 1.720e-30 Identity = 138/515 (26.80%), Postives = 223/515 (43.30%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNT----------------------LNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+IP I +L QL L L KNK+T LP IG L +L+++ L N L LP L SLE LDL +N+ + +P I L+ L + YN++ + + I L L DV +NKI E P + S V V+ N +T P E D + +T L H N++ ELP I L LV++ + +N + IP L + L+ V+ N + + +T +L + + ++T+FP+ P + ST ++++ + I+ IP F K ++ +NL N+LV P+ + S SI L+LS N+L L + V+L+ L L+ N L+ LP + L L V N + L LP I NL +L+ L + I P+ L L L L++N + +P E LC+ ++I +++ + + + G +V +YL+ Q
Sbjct: 87 SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVP---------EEIGDCHSLTQLDLQH--------------NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGP---------------------QQFVSTVTINMEHNQISKIPIGIFS--KATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQ 548 HSP 2 Score: 62.3882 bits (150), Expect = 7.515e-10 Identity = 76/315 (24.13%), Postives = 145/315 (46.03%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGT-LNHLQQIILGNNLLKLLPTE-------------------------FCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFP---KDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFN-NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
LT+LDL N + ++ I L NL+ + ++ N ++ IP E+ QL + N + +LP ++ T L + + L N L P F + L L+L NE +P +G++ + L++S N+L+ LP++I KL L +S N++ + P +L+ E+ + T+ L +L + +N+I TL I + ++ L + +NN+ +P EI L L L ++ N +LH++P+ L +L+++ ++ +P I G ++ +YL+ +
Sbjct: 236 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPR-SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 549 HSP 3 Score: 51.2174 bits (121), Expect = 2.341e-6 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPK--NFMRLKLLTELDLSNNEIEIIPPEFG 1838
LDLS+ ITSIP EL + ++ L NKL P I V+LK L L+ N L +LP+S +++ +L TL++ HN L E+P VI+ + +L+ L Y IV ++ + N +LK+ LD+ N+I +P G
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTEL---FLYKNKLTCLPTEI------------------------GQLVNLKKLGLSENALTSLPDSLASLE-SLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKM---LDVRENKIRELPSAIG 208
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 127.487 bits (319), Expect = 1.720e-30 Identity = 138/515 (26.80%), Postives = 223/515 (43.30%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNT----------------------LNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+IP I +L QL L L KNK+T LP IG L +L+++ L N L LP L SLE LDL +N+ + +P I L+ L + YN++ + + I L L DV +NKI E P + S V V+ N +T P E D + +T L H N++ ELP I L LV++ + +N + IP L + L+ V+ N + + +T +L + + ++T+FP+ P + ST ++++ + I+ IP F K ++ +NL N+LV P+ + S SI L+LS N+L L + V+L+ L L+ N L+ LP + L L V N + L LP I NL +L+ L + I P+ L L L L++N + +P E LC+ ++I +++ + + + G +V +YL+ Q
Sbjct: 87 SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVP---------EEIGDCHSLTQLDLQH--------------NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGP---------------------QQFVSTVTINMEHNQISKIPIGIFS--KATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQ 548 HSP 2 Score: 62.3882 bits (150), Expect = 7.515e-10 Identity = 76/315 (24.13%), Postives = 145/315 (46.03%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGT-LNHLQQIILGNNLLKLLPTE-------------------------FCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFP---KDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFN-NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
LT+LDL N + ++ I L NL+ + ++ N ++ IP E+ QL + N + +LP ++ T L + + L N L P F + L L+L NE +P +G++ + L++S N+L+ LP++I KL L +S N++ + P +L+ E+ + T+ L +L + +N+I TL I + ++ L + +NN+ +P EI L L L ++ N +LH++P+ L +L+++ ++ +P I G ++ +YL+ +
Sbjct: 236 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPR-SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 549 HSP 3 Score: 51.2174 bits (121), Expect = 2.341e-6 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPK--NFMRLKLLTELDLSNNEIEIIPPEFG 1838
LDLS+ ITSIP EL + ++ L NKL P I V+LK L L+ N L +LP+S +++ +L TL++ HN L E+P VI+ + +L+ L Y IV ++ + N +LK+ LD+ N+I +P G
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTEL---FLYKNKLTCLPTEI------------------------GQLVNLKKLGLSENALTSLPDSLASLE-SLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKM---LDVRENKIRELPSAIG 208
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 127.102 bits (318), Expect = 1.774e-30 Identity = 138/515 (26.80%), Postives = 223/515 (43.30%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNT----------------------LNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+IP I +L QL L L KNK+T LP IG L +L+++ L N L LP L SLE LDL +N+ + +P I L+ L + YN++ + + I L L DV +NKI E P + S V V+ N +T P E D + +T L H N++ ELP I L LV++ + +N + IP L + L+ V+ N + + +T +L + + ++T+FP+ P + ST ++++ + I+ IP F K ++ +NL N+LV P+ + S SI L+LS N+L L + V+L+ L L+ N L+ LP + L L V N + L LP I NL +L+ L + I P+ L L L L++N + +P E LC+ ++I +++ + + + G +V +YL+ Q
Sbjct: 77 SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVP---------EEIGDCHSLTQLDLQH--------------NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGP---------------------QQFVSTVTINMEHNQISKIPIGIFS--KATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQ 538 HSP 2 Score: 62.003 bits (149), Expect = 1.002e-9 Identity = 76/315 (24.13%), Postives = 145/315 (46.03%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGT-LNHLQQIILGNNLLKLLPTE-------------------------FCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFP---KDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFN-NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
LT+LDL N + ++ I L NL+ + ++ N ++ IP E+ QL + N + +LP ++ T L + + L N L P F + L L+L NE +P +G++ + L++S N+L+ LP++I KL L +S N++ + P +L+ E+ + T+ L +L + +N+I TL I + ++ L + +NN+ +P EI L L L ++ N +LH++P+ L +L+++ ++ +P I G ++ +YL+ +
Sbjct: 226 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPR-SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 539 HSP 3 Score: 51.6026 bits (122), Expect = 1.885e-6 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPK--NFMRLKLLTELDLSNNEIEIIPPEFG 1838
LDLS+ ITSIP EL + ++ L NKL P I V+LK L L+ N L +LP+S +++ +L TL++ HN L E+P VI+ + +L+ L Y IV ++ + N +LK+ LD+ N+I +P G
Sbjct: 68 LDLSSIEITSIPSPIKELTQLTEL---FLYKNKLTCLPTEI------------------------GQLVNLKKLGLSENALTSLPDSLASLE-SLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKM---LDVRENKIRELPSAIG 198
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 127.102 bits (318), Expect = 2.008e-30 Identity = 138/515 (26.80%), Postives = 223/515 (43.30%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNT----------------------LNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+IP I +L QL L L KNK+T LP IG L +L+++ L N L LP L SLE LDL +N+ + +P I L+ L + YN++ + + I L L DV +NKI E P + S V V+ N +T P E D + +T L H N++ ELP I L LV++ + +N + IP L + L+ V+ N + + +T +L + + ++T+FP+ P + ST ++++ + I+ IP F K ++ +NL N+LV P+ + S SI L+LS N+L L + V+L+ L L+ N L+ LP + L L V N + L LP I NL +L+ L + I P+ L L L L++N + +P E LC+ ++I +++ + + + G +V +YL+ Q
Sbjct: 86 SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVP---------EEIGDCHSLTQLDLQH--------------NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGP---------------------QQFVSTVTINMEHNQISKIPIGIFS--KATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQ 547 HSP 2 Score: 62.003 bits (149), Expect = 1.079e-9 Identity = 76/315 (24.13%), Postives = 145/315 (46.03%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGT-LNHLQQIILGNNLLKLLPTE-------------------------FCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFP---KDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFN-NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
LT+LDL N + ++ I L NL+ + ++ N ++ IP E+ QL + N + +LP ++ T L + + L N L P F + L L+L NE +P +G++ + L++S N+L+ LP++I KL L +S N++ + P +L+ E+ + T+ L +L + +N+I TL I + ++ L + +NN+ +P EI L L L ++ N +LH++P+ L +L+++ ++ +P I G ++ +YL+ +
Sbjct: 235 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPR-SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 548 HSP 3 Score: 51.6026 bits (122), Expect = 1.854e-6 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPK--NFMRLKLLTELDLSNNEIEIIPPEFG 1838
LDLS+ ITSIP EL + ++ L NKL P I V+LK L L+ N L +LP+S +++ +L TL++ HN L E+P VI+ + +L+ L Y IV ++ + N +LK+ LD+ N+I +P G
Sbjct: 77 LDLSSIEITSIPSPIKELTQLTEL---FLYKNKLTCLPTEI------------------------GQLVNLKKLGLSENALTSLPDSLASLE-SLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKM---LDVRENKIRELPSAIG 207
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0082847) HSP 1 Score: 219.55 bits (558), Expect = 1.571e-61 Identity = 177/589 (30.05%), Postives = 295/589 (50.08%), Query Frame = 3
Query: 225 ARKTGTLTLINFGFDEIPTDIYNINRPD--KRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS---------NMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
ARK+GTL L N +P +Y+IN D + + E ++ ++WW V L LDLSSN + +S I L +L L L +N L +P EI L +L LN+S NK++ LP ++ +L L+ + + N L + L LE LD +N +P IG ++L L + YN +++LP ++ +++L D+ N ++ P+D+ + L + N I P +L ELH NN I + S +P++ IL + N + ELP+E+ L+ L +LDVS N + +P L ++ L L V+GNP ++I R + GT + + L R+ ++D ++ ++ + + + G DI D ++L T +L ++ +TS+P+ F++ + + + VV+ N+L P G+ + L LS N + + + F + LNL+ N L LP F + NTL L +A+N +P ++ L L+ L AS I ++N ++ L+ LDL NN+IE +PP G +I L GN R P + GT+ + YLR +I
Sbjct: 63 ARKSGTLNLSNKALARVPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDG-DIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVL-NTLRELNIANNRFPC-IPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRI 648
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0082846) HSP 1 Score: 219.55 bits (558), Expect = 3.261e-61 Identity = 177/589 (30.05%), Postives = 295/589 (50.08%), Query Frame = 3
Query: 225 ARKTGTLTLINFGFDEIPTDIYNINRPD--KRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS---------NMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
ARK+GTL L N +P +Y+IN D + + E ++ ++WW V L LDLSSN + +S I L +L L L +N L +P EI L +L LN+S NK++ LP ++ +L L+ + + N L + L LE LD +N +P IG ++L L + YN +++LP ++ +++L D+ N ++ P+D+ + L + N I P +L ELH NN I + S +P++ IL + N + ELP+E+ L+ L +LDVS N + +P L ++ L L V+GNP ++I R + GT + + L R+ ++D ++ ++ + + + G DI D ++L T +L ++ +TS+P+ F++ + + + VV+ N+L P G+ + L LS N + + + F + LNL+ N L LP F + NTL L +A+N +P ++ L L+ L AS I ++N ++ L+ LDL NN+IE +PP G +I L GN R P + GT+ + YLR +I
Sbjct: 106 ARKSGTLNLSNKALARVPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDG-DIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVL-NTLRELNIANNRFPC-IPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRI 691
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0112939) HSP 1 Score: 206.453 bits (524), Expect = 4.406e-57 Identity = 169/575 (29.39%), Postives = 288/575 (50.09%), Query Frame = 3
Query: 267 DEIPTDIYNINRPD--KRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS---------NMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+++P +Y+IN D + + E ++ ++WW V L LDLSSN + +S I L +L L L +N L +P EI L +L LN+S NK++ LP ++ +L L+ + + N L + L LE LD +N +P IG ++L L + YN +++LP ++ +++L D+ N ++ P+D+ + L + N I P +L ELH NN I + S +P++ IL + N + ELP+E+ L+ L +LDVS N + +P L ++ L L V+GNP ++I R + GT + + L R+ ++D ++ ++ + + + G DI D ++L T +L ++ +TS+P+ F++ + + + VV+ N+L P G+ + L LS N + + + F + LNL+ N L LP F + NTL L +A+N +P ++ L L+ L AS I ++N ++ L+ LDL NN+IE +PP G +I L GN R P + GT+ + YLR +I
Sbjct: 47 EDLPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDG-DIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVL-NTLRELNIANNRFPC-IPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRI 618
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0334528) HSP 1 Score: 148.288 bits (373), Expect = 3.091e-37 Identity = 109/339 (32.15%), Postives = 177/339 (52.21%), Query Frame = 3
Query: 225 ARKTGTLTLINFGFDEIPTDIYNINRPD--KRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
ARK+GTL L N +P +Y+IN D + + E ++ ++WW V L LDLSSN + +S I L +L L L +N L +P EI L +L LN+S NK++ LP ++ +L L+ + + N L + L LE LD +N +P IG ++L L + YN +++LP ++ +++L D+ N ++ P+D+ + L + N I P +L ELH NN I + S +P++ IL + N + ELP+E+ L+ L +LDVS N + +P L ++ L L V+GNP ++I R + GT + + L R+
Sbjct: 63 ARKSGTLNLSNKALARVPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRA 401
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0334527) HSP 1 Score: 149.443 bits (376), Expect = 4.856e-37 Identity = 109/339 (32.15%), Postives = 177/339 (52.21%), Query Frame = 3
Query: 225 ARKTGTLTLINFGFDEIPTDIYNINRPD--KRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRS 1229
ARK+GTL L N +P +Y+IN D + + E ++ ++WW V L LDLSSN + +S I L +L L L +N L +P EI L +L LN+S NK++ LP ++ +L L+ + + N L + L LE LD +N +P IG ++L L + YN +++LP ++ +++L D+ N ++ P+D+ + L + N I P +L ELH NN I + S +P++ IL + N + ELP+E+ L+ L +LDVS N + +P L ++ L L V+GNP ++I R + GT + + L R+
Sbjct: 63 ARKSGTLNLSNKALARVPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRA 401 HSP 2 Score: 81.2629 bits (199), Expect = 2.019e-15 Identity = 63/207 (30.43%), Postives = 104/207 (50.24%), Query Frame = 3
Query: 1332 HELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++L T +L ++ +TS+P+ F++ + + + VV+ N+L P G+ + L LS N + + + F + LNL+ N L LP F + NTL L +A+N +P ++ L L+ L AS I ++N ++ L+ LDL NN+IE +PP G +I L GN R P + GT+ + YLR +I
Sbjct: 553 YKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVL-NTLRELNIANNRFPC-IPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRI 757 HSP 3 Score: 52.373 bits (124), Expect = 1.756e-6 Identity = 55/235 (23.40%), Postives = 112/235 (47.66%), Query Frame = 3
Query: 537 NKITVLPESIGTLNHLQQIILGNNLLKLLPTE---FCRLLSLEVLDLSNNEFSHIPDAIGNFIKL-KRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIEL-PNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTR 1226
++ V P + L H + + + L +P + R + V+D + N+ S +P+ + + L L +S N + +P+ I + + + ++S N +++ P + F VL +L+EL+I NN+ + + + + + IL S+N++ L + + +++ L LD+ N++ ++P LGN+ + L + GNPFR + GT+ + YLR R
Sbjct: 543 SRSAVHPRWVYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTE----FGVLN----------------TLRELNIANNRFPCIPNC-VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDR 756
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:334130]) HSP 1 Score: 288.5 bits (737), Expect = 2.148e-87 Identity = 196/588 (33.33%), Postives = 315/588 (53.57%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDI---SVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ ARK+G L L G E+P ++ N++ P + + F +EDR WWE LTKL LSSN ++ + +D++ L L+ LD+ +N L ++PD I DL QL+ L LS NK+T LP + L +L+ + L NL++ +P + +L++L+ LDLSNN IP+++ N L +L +S NKL+ LP I ++K L D S+N++ P L S E L + N + P +LKELH NNQI L + H+ ++ +++L + N V LP EI L+ L +LD++ N++ S+P LG + L+ L ++GNP R+I R +T GT L +YLR+R + P ++ E + S I+ H + + +LD S + SIP++ F+ + VN N+L P I+ ++ ++L FN+L + F H L ++L N L +LP + L ++ ++ N PEV++ + +L+ + S + I+ L L+ LDLSNN+I +PPE G C ++ LDGN R+P + GT+ V EYLRS+I
Sbjct: 28 GLLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNV-SFGAEDR--WWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRFLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSR-----------VQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDASIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIK-LRSVILSFNRFK-SFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSRI 599 HSP 2 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 94/326 (28.83%), Postives = 145/326 (44.48%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILK--RYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN-----PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L +S N + +P+++ L LV LD+ N L S+P ++G+++ LQ L + N T + SG L R L + N+ I P D +L + LDLSN ++ IPE+ L K+ +L NKL P I S ++ LD S N++ + V SL+ L L N LR LPE TL L +N + + +LK+LNA + N P+ L+ L LDL+NN+I +P G +K +L+GN +R ++ GT + +YLRS++Q
Sbjct: 85 LLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKL-----TELPSGVWRLTNLRCLHLQQNL--IEQIPR----------------------DLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKL---DLSCNKLKSLPPAI-SQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRFLPE--LPCCKTLKELHCGNNQIE------VLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQ 369
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: lrrc1 (leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]) HSP 1 Score: 105.531 bits (262), Expect = 1.229e-23 Identity = 73/233 (31.33%), Postives = 121/233 (51.93%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
+P+ +L L L+++ + LP++IG L +L + L NLL LP +L LE LD+ +NE ++P+ IG + LK L + N+L +P + +++L DVS+NK+ P+++ S L V+ N+I L P + +L L L D N++ L I + ++ L +++N ++ LP I LK L + N L S+P +G +L VLCV N I
Sbjct: 32 LPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLK-RLSILKADQNRLVQLPE-SIGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCCSLNVLCVRENRLMRI 262 HSP 2 Score: 95.1301 bits (235), Expect = 3.331e-20 Identity = 63/216 (29.17%), Postives = 114/216 (52.78%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKEL---HIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNM 1121
+P+ + L +L L++ N++ LPE+IG L L+ + L N L +P E + SL LD+S N+ +P+ +GN + L L +S N ++ LP+ I KLK L QN++ + P+ + + ++ + L + R LK+L + D N++T+L I ++N+L + +N ++ +P E+ L LD+S N L +P L ++
Sbjct: 78 LPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLTSLPK-EIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTSL 292 HSP 3 Score: 58.9214 bits (141), Expect = 1.458e-8 Identity = 77/323 (23.84%), Postives = 137/323 (42.41%), Query Frame = 3
Query: 735 ISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI--------NRTAITSGTEILKRYLRTRSNMEDIT------SFPSLAPLPINSIESEAGNDISVLHIDAHEL----------NSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
+S+ + +LP++I K L D S N ++ P+ FP R +L L I++ + L +I + N+ L + +N + LP + L+ L +LDV N L+++P +G + +L+ L +DGN I + T + L+R N+ +T + L P I ++ +S+L D + L S L L+ + ++P + + K KK+ N N+L P I C S+ L + NRL+ + + L L+L+GN L LP + T+++
Sbjct: 1 LSFADIMELPESISYCKTLQVADFSGNPLTRLPES-----------------FPELR---NLACLSINDISLQALPD-NIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKR-----LSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRS---IGKLKKLSNFNCDRNRLTSLPKEIGGCC-SLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTSLR 293 HSP 4 Score: 56.225 bits (134), Expect = 8.861e-8 Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 3
Query: 1296 AGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHI 1853
+GN ++ L EL + L +++ ++ ++P+N L ++ L N L P LS + LD+ N L L + VSLK L L+GN L +P +M+ +L L+V+ N L LPE + NL++L L S I ++ P+ +LK L+ L N + +P G CE +
Sbjct: 25 SGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLE---LRENLLTYLPES-LSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMR-SLTCLDVSENKLE-RLPEEMGNLLSLTDLLVSQNLIDLL-PEGIGKLKRLSILKADQNRLVQLPESIGHCESL 203 HSP 5 Score: 53.1434 bits (126), Expect = 7.668e-7 Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 3
Query: 1512 LSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
LSF ++EL + ++ +L+ + +GN L LPESF ++N L L + N + L+ LP+ I NL NL L + + P++ +L+ L ELD+ +NE+ +P G +K LDGN++
Sbjct: 1 LSFADIMELPESISYCKTLQVADFSGNPLTRLPESFPELRN-LACLSI--NDISLQALPDNIGNLCNLVSLELRENLLTYL-PESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQL 121 HSP 6 Score: 51.2174 bits (121), Expect = 3.759e-6 Identity = 83/327 (25.38%), Postives = 128/327 (39.14%), Query Frame = 3
Query: 1074 VSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHI--DAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEI----------------------------EI------------------IPPEFGLCEHIKIANLDGNKIRHPALTSVS 1910
+SF ++ +P ++ TLQV GNP + SFP L L SI NDIS+ + + L + SL+L +T +PE+ +L K +++ V G N+L P I C S+ L L N+L ++ SL L+++ N L LPE + +L L V+ N + L LPE I L L L A +V + P++ + LTEL L+ N++ EI IPPE + + +L GN++ + LT S
Sbjct: 1 LSFADIMELPESISYCKTLQVADFSGNPLTRLPE------------------------SFPELRNLACLSI-----NDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDV---GSNELYNLPETI-GCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLL-SLTDLLVSQNLIDL-LPEGIGKLKRLSILKADQNRLVQL-PESIGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTS 291
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 103.99 bits (258), Expect = 9.675e-23 Identity = 121/432 (28.01%), Postives = 200/432 (46.30%), Query Frame = 3
Query: 636 CRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTA--ITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSL-DLSNRNITSIPENYFELF------KFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
CR + LDLS +P +I +L L + NKL+ LP + L L+ +S+N ++ P LD +L + N + P V R++ SL L++ N+ITT+ I + + +L+I +N + +LP EI +L L+ LDV+ N L +P +GN + L + N + T + S + RY R +++ P SLA + N+ISVL G L L N ++ N F+ + +F I +N+ HN++ + P GI S A + L++ N+L L F + S+ LNL N L +PE + +L L +++N L +LP I NL L+ L+ + + P LK L +L L+NN++ +P G ++ L N ++H
Sbjct: 76 CREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVS-SLTTLYLRFNRITTVEK-DIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNR-------LSAIPRSLAKCRELEELNLENNNISVL--------PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLK-KLPYGIGNLRKLRELDLEENKLESL-PNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQH 487 HSP 2 Score: 99.7525 bits (247), Expect = 2.243e-21 Identity = 138/536 (25.75%), Postives = 237/536 (44.22%), Query Frame = 3
Query: 381 KLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNST-----------GSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAF-SIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+LDLS I + I+ L+ L L L +N L+++P E+ L+ L L LS+N +T LP+S+ L L+ + L +N L+ +P R+ SL L L N + + I N KL LSI NK+++LP I +L LI DV+ N++ PK++ + QIT L H N++++LP I +L + +L + +N L +IP +L L+ L ++ N + ++S + L S+P P ++I S L+++ + +N L++ + +TS+P + + + +NL N+L + P I C S+ L LS N L +L + L+ L+L N L +LP +K+ L L + +N L LP I +L NL YL + + P+ L+ L +L L++N + +P E LC + I +++ + H V+ G + ++L+ Q
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG------------------------------NCTQITNLDLQH--------------NDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNC----FQSYPVGGPSQFSTIYS--------LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP---LDFGTWTSMVELNLATNQLTKIPEDI--CGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLT-TLPRGIGHLTNLTYLGLGENLLQHL-PEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQ 554 HSP 3 Score: 86.2705 bits (212), Expect = 4.553e-17 Identity = 84/300 (28.00%), Postives = 148/300 (49.33%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITL-------FPVSRLTPS----------------------------LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L LDL N ++++ + +S+L L L+ N + T+ +I +L++L L++ +NKI LP IG L +L + + +N L+ LP E + LDL +N+ +P+ IGN + RL + YN+L +P+++ K + L ++ N IS P+ L +S VN+ +TL +PV PS L +L++ +NQ+T+L L ++ L ++ N + ++P +I L L L +S N L +PY +GN+ L+ L ++ N S+
Sbjct: 150 LRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSL----VNLTSLTLARNCFQSYPVG--GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESL 442 HSP 4 Score: 50.8322 bits (120), Expect = 4.944e-6 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNL-LKLLPTEFCRLLSLEVLDLSNNEFSHIPDAI 704
L +LDL N ++ + +I +L +L L L NN L T+P I L L YL L +N + LPE IGTL +L+ + L +N L LP E L ++ + N SH+P I
Sbjct: 429 LRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 539
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 103.99 bits (258), Expect = 9.675e-23 Identity = 121/432 (28.01%), Postives = 200/432 (46.30%), Query Frame = 3
Query: 636 CRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTA--ITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSL-DLSNRNITSIPENYFELF------KFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
CR + LDLS +P +I +L L + NKL+ LP + L L+ +S+N ++ P LD +L + N + P V R++ SL L++ N+ITT+ I + + +L+I +N + +LP EI +L L+ LDV+ N L +P +GN + L + N + T + S + RY R +++ P SLA + N+ISVL G L L N ++ N F+ + +F I +N+ HN++ + P GI S A + L++ N+L L F + S+ LNL N L +PE + +L L +++N L +LP I NL L+ L+ + + P LK L +L L+NN++ +P G ++ L N ++H
Sbjct: 76 CREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVS-SLTTLYLRFNRITTVEK-DIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNR-------LSAIPRSLAKCRELEELNLENNNISVL--------PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLK-KLPYGIGNLRKLRELDLEENKLESL-PNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQH 487 HSP 2 Score: 99.7525 bits (247), Expect = 2.243e-21 Identity = 138/536 (25.75%), Postives = 237/536 (44.22%), Query Frame = 3
Query: 381 KLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNST-----------GSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAF-SIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+LDLS I + I+ L+ L L L +N L+++P E+ L+ L L LS+N +T LP+S+ L L+ + L +N L+ +P R+ SL L L N + + I N KL LSI NK+++LP I +L LI DV+ N++ PK++ + QIT L H N++++LP I +L + +L + +N L +IP +L L+ L ++ N + ++S + L S+P P ++I S L+++ + +N L++ + +TS+P + + + +NL N+L + P I C S+ L LS N L +L + L+ L+L N L +LP +K+ L L + +N L LP I +L NL YL + + P+ L+ L +L L++N + +P E LC + I +++ + H V+ G + ++L+ Q
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG------------------------------NCTQITNLDLQH--------------NDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNC----FQSYPVGGPSQFSTIYS--------LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP---LDFGTWTSMVELNLATNQLTKIPEDI--CGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLT-TLPRGIGHLTNLTYLGLGENLLQHL-PEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQ 554 HSP 3 Score: 86.2705 bits (212), Expect = 4.553e-17 Identity = 84/300 (28.00%), Postives = 148/300 (49.33%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITL-------FPVSRLTPS----------------------------LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L LDL N ++++ + +S+L L L+ N + T+ +I +L++L L++ +NKI LP IG L +L + + +N L+ LP E + LDL +N+ +P+ IGN + RL + YN+L +P+++ K + L ++ N IS P+ L +S VN+ +TL +PV PS L +L++ +NQ+T+L L ++ L ++ N + ++P +I L L L +S N L +PY +GN+ L+ L ++ N S+
Sbjct: 150 LRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSL----VNLTSLTLARNCFQSYPVG--GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESL 442 HSP 4 Score: 50.8322 bits (120), Expect = 4.944e-6 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNL-LKLLPTEFCRLLSLEVLDLSNNEFSHIPDAI 704
L +LDL N ++ + +I +L +L L L NN L T+P I L L YL L +N + LPE IGTL +L+ + L +N L LP E L ++ + N SH+P I
Sbjct: 429 LRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 539
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 103.99 bits (258), Expect = 9.675e-23 Identity = 121/432 (28.01%), Postives = 200/432 (46.30%), Query Frame = 3
Query: 636 CRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTA--ITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSL-DLSNRNITSIPENYFELF------KFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
CR + LDLS +P +I +L L + NKL+ LP + L L+ +S+N ++ P LD +L + N + P V R++ SL L++ N+ITT+ I + + +L+I +N + +LP EI +L L+ LDV+ N L +P +GN + L + N + T + S + RY R +++ P SLA + N+ISVL G L L N ++ N F+ + +F I +N+ HN++ + P GI S A + L++ N+L L F + S+ LNL N L +PE + +L L +++N L +LP I NL L+ L+ + + P LK L +L L+NN++ +P G ++ L N ++H
Sbjct: 76 CREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVS-SLTTLYLRFNRITTVEK-DIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNR-------LSAIPRSLAKCRELEELNLENNNISVL--------PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLK-KLPYGIGNLRKLRELDLEENKLESL-PNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQH 487 HSP 2 Score: 99.7525 bits (247), Expect = 2.243e-21 Identity = 138/536 (25.75%), Postives = 237/536 (44.22%), Query Frame = 3
Query: 381 KLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNST-----------GSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAF-SIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+LDLS I + I+ L+ L L L +N L+++P E+ L+ L L LS+N +T LP+S+ L L+ + L +N L+ +P R+ SL L L N + + I N KL LSI NK+++LP I +L LI DV+ N++ PK++ + QIT L H N++++LP I +L + +L + +N L +IP +L L+ L ++ N + ++S + L S+P P ++I S L+++ + +N L++ + +TS+P + + + +NL N+L + P I C S+ L LS N L +L + L+ L+L N L +LP +K+ L L + +N L LP I +L NL YL + + P+ L+ L +L L++N + +P E LC + I +++ + H V+ G + ++L+ Q
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG------------------------------NCTQITNLDLQH--------------NDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNC----FQSYPVGGPSQFSTIYS--------LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP---LDFGTWTSMVELNLATNQLTKIPEDI--CGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLT-TLPRGIGHLTNLTYLGLGENLLQHL-PEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQ 554 HSP 3 Score: 86.2705 bits (212), Expect = 4.553e-17 Identity = 84/300 (28.00%), Postives = 148/300 (49.33%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITL-------FPVSRLTPS----------------------------LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L LDL N ++++ + +S+L L L+ N + T+ +I +L++L L++ +NKI LP IG L +L + + +N L+ LP E + LDL +N+ +P+ IGN + RL + YN+L +P+++ K + L ++ N IS P+ L +S VN+ +TL +PV PS L +L++ +NQ+T+L L ++ L ++ N + ++P +I L L L +S N L +PY +GN+ L+ L ++ N S+
Sbjct: 150 LRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSL----VNLTSLTLARNCFQSYPVG--GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESL 442 HSP 4 Score: 50.8322 bits (120), Expect = 4.944e-6 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNL-LKLLPTEFCRLLSLEVLDLSNNEFSHIPDAI 704
L +LDL N ++ + +I +L +L L L NN L T+P I L L YL L +N + LPE IGTL +L+ + L +N L LP E L ++ + N SH+P I
Sbjct: 429 LRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 539
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 264.233 bits (674), Expect = 4.112e-78 Identity = 190/589 (32.26%), Postives = 301/589 (51.10%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTR------SNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+I ARK+G L L G ++P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP+ + L +L+ ++L +N L+ LP L LE LD+SNN I ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI L L +LD+S N+L S+P LG++ L+ L ++GNP R I R + GT+ L +YL+ R ED S + LP S+ ++ H + + +L+ + + IPE F I VN N+L E P I+ S+ ++L FN++ +S + L +++ N L +LP M L ++ ++ N P+V++ + L+ + S I I+P +++ L+ LDL NN++ IPP G CE + +L+GN R+P ++ GT V EYLRS+I
Sbjct: 30 GLIKAARKSGQLNLSARGLTDVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTATAMTLPSESV------------VNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAM-TRLQSVILSFNRFK-HFPDVLYRIPTLETILISSNQIGSIDP---IKMTKLSTLDLQNNDLLQIPPALGNCESQRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRI 600 HSP 2 Score: 71.2478 bits (173), Expect = 3.879e-12 Identity = 84/286 (29.37%), Postives = 125/286 (43.71%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN------TLNTLE-VAHNPLGLE--------------LPEVIFNLVNLKYLNASYCAIVIINPKNFM-------------RLKLLTE----------LDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
EDI+ P+L L I+ N I L EL + L++S+ I +P+ EL + +K + L HN+L E P IG LS + LD+S N L +S L NL+ N L LP MKN T N LE V + G+E LPE+ F L LK L+ I + P++ +LK+L E LDLSNN++ +P G ++K L+GN +R ++ GT+ + +YL+ ++Q
Sbjct: 99 EDISLLPALVVLDIHD------NQIVSLPCAIKELTNLQKLNISHNKIKQLPK---ELQHLQNLKSLLLQHNQLEELPDSIGHLSI---LEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPF-LTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQ 371
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 247.284 bits (630), Expect = 6.569e-72 Identity = 188/599 (31.39%), Postives = 301/599 (50.25%), Query Frame = 3
Query: 189 AFKVPGKN-------IIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCE--HIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
F+ P + +I ARK+G L L G ++P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP+ + L +L+ ++L +N L+ LP L LE LD+SNN I ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI L L +LD+S N+L S+P LG++ L+ L ++GNP R I R + L L ++ ED S + LP S+ ++ H + + +L+ + + IPE F I VN N+L E P I+ S+ ++L FN++ +S + L +++ N L +LP M L ++ ++ N P+V++ + L+ + S I I+P +++ L+ LDL NN++ IPP G CE ++ +L+GN R+P ++ GT V EYLRS+I
Sbjct: 12 GFRAPKEQEPAVPHGLIKAARKSGQLNLSARGLTDVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNVIIAYLYCSLDVKTQ-EDENSTATAMTLPSESV------------VNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTR-LQSVILSFNRFK-HFPDVLYRIPTLETILISSNQIGSIDP---IKMTKLSTLDLQNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRI 591
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 247.284 bits (630), Expect = 6.614e-72 Identity = 188/599 (31.39%), Postives = 301/599 (50.25%), Query Frame = 3
Query: 189 AFKVPGKN-------IIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCE--HIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
F+ P + +I ARK+G L L G ++P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP+ + L +L+ ++L +N L+ LP L LE LD+SNN I ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI L L +LD+S N+L S+P LG++ L+ L ++GNP R I R + L L ++ ED S + LP S+ ++ H + + +L+ + + IPE F I VN N+L E P I+ S+ ++L FN++ +S + L +++ N L +LP M L ++ ++ N P+V++ + L+ + S I I+P +++ L+ LDL NN++ IPP G CE ++ +L+GN R+P ++ GT V EYLRS+I
Sbjct: 16 GFRAPKEQEPAVPHGLIKAARKSGQLNLSARGLTDVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNVIIAYLYCSLDVKTQ-EDENSTATAMTLPSESV------------VNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTR-LQSVILSFNRFK-HFPDVLYRIPTLETILISSNQIGSIDP---IKMTKLSTLDLQNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRI 595
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 244.973 bits (624), Expect = 3.483e-71 Identity = 187/585 (31.97%), Postives = 290/585 (49.57%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCE--HIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+I ARK+G L L G ++P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP+ + L +L+ ++L +N L+ LP L LE LD+SNN I ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI L L +LD+S N+L S+P LG++ L+ L ++GNP R I R + GT+ L +YL+ R + L I L SL IPE F I VN N+L E P I+ S+ ++L FN++ +S + L +++ N L +LP M L ++ ++ N P+V++ + L+ + S I I+P +++ L+ LDL NN++ IPP G CE ++ +L+GN R+P ++ GT V EYLRS+I
Sbjct: 30 GLIKAARKSGQLNLSARGLTDVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVP------------------------GKLFIHPKILEKQASL---------IPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAM-TRLQSVILSFNRFK-HFPDVLYRIPTLETILISSNQIGSIDP---IKMTKLSTLDLQNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRI 575 HSP 2 Score: 70.8626 bits (172), Expect = 4.317e-12 Identity = 84/286 (29.37%), Postives = 125/286 (43.71%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN------TLNTLE-VAHNPLGLE--------------LPEVIFNLVNLKYLNASYCAIVIINPKNFM-------------RLKLLTE----------LDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
EDI+ P+L L I+ N I L EL + L++S+ I +P+ EL + +K + L HN+L E P IG LS + LD+S N L +S L NL+ N L LP MKN T N LE V + G+E LPE+ F L LK L+ I + P++ +LK+L E LDLSNN++ +P G ++K L+GN +R ++ GT+ + +YL+ ++Q
Sbjct: 99 EDISLLPALVVLDIHD------NQIVSLPCAIKELTNLQKLNISHNKIKQLPK---ELQHLQNLKSLLLQHNQLEELPDSIGHLSI---LEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPF-LTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQ 371
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 236.498 bits (602), Expect = 2.630e-68 Identity = 184/594 (30.98%), Postives = 285/594 (47.98%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPI---------GILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCE--HIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+I ARK+G L L G ++P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP+ + L +L+ ++L +N L+ LP L LE LD+SNN I ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI L L +LD+S N+L S+P LG++ L+ L ++GNP R I R + GT+ L +YL+ R+ ED S + LP S+ ++ H + + +L+ + + IPE F I VN N+L E P + + ++ LSFNR F HF P+V++ + L+ + S I I+P +++ L+ LDL NN++ IPP G CE ++ +L+GN R+P ++ GT V EYLRS+I
Sbjct: 30 GLIKAARKSGQLNLSARGLTDVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRTQ-EDENSTATAMTLPSESV------------VNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARNNVLTSLPSEMEAMTRLQSVILSFNR-------FKHF-----------------------------------------PDVLYRIPTLETILISSNQIGSIDP---IKMTKLSTLDLQNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRI 558 HSP 2 Score: 69.707 bits (169), Expect = 1.077e-11 Identity = 84/288 (29.17%), Postives = 125/288 (43.40%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN------TLNTLE-VAHNPLGLE--------------LPEVIFNLVNLKYLNASYCAIVIINPKNFM-------------RLKLLTE----------LDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
EDI+ P+L L I+ N I L EL + L++S+ I +P+ EL + +K + L HN+L E P IG LS + LD+S N L +S L NL+ N L LP MKN T N LE V + G+E LPE+ F L LK L+ I + P++ +LK+L E LDLSNN++ +P G ++K L+GN +R ++ GT+ + +YL+ + Q +
Sbjct: 99 EDISLLPALVVLDIHD------NQIVSLPCAIKELTNLQKLNISHNKIKQLPK---ELQHLQNLKSLLLQHNQLEELPDSIGHLSI---LEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPF-LTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRTQED 373
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc40 (leucine rich repeat containing 40 [Source:MGI Symbol;Acc:MGI:1914394]) HSP 1 Score: 262.307 bits (669), Expect = 1.912e-77 Identity = 191/586 (32.59%), Postives = 316/586 (53.92%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+ ++ AR +G L L E+P ++ IN P++ F S +R WW+ LTKL +SSN ++ +S+D+R L L LD+ +N L ++P I +L L+ LN+S NK+ +LPE I +L +L+ + L +N L +P F L LE LDLS+N + +P L RL++S N+L+ LP I ++K L + D N + P D+ + S E+L + N + + P LKELH+ NQI L + H+ ++ I +L + N + +P E+ L+ L +LD+S N++ S+P +LGN+ L+ L ++GNP R+I R I GT+ + +YLR++ +D T+ P ++ SEA ++ H + + LD S++ T IP++ F+ K I +N N+L E P I+ ++ ++LSFN+L +S L L+L N+L +LPE +++ L T+ ++ N + PEV++ + L+ + S + ++P+ ++ L LDL NN++ IPPE G C ++ LDGN R P + GT V EYLR +I
Sbjct: 29 QGLLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNL-SFSSTER--WWDQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIK-DDRTNQNDSVPETAMTLPSEA-------RVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSL-TKLQTINLSFNRFKV-FPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRI 600 HSP 2 Score: 65.855 bits (159), Expect = 1.420e-10 Identity = 76/288 (26.39%), Postives = 129/288 (44.79%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGI--LSCAFSIVTLDLSFNRLLELSDVF-----------------------NHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGL--------ELPEVIFNLVNLKYLNASYC----AIVIIN---------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
+D+ P+L L I+ N ++ L EL++ L++S+ + +PE E+ K ++ ++L HN+L P G LSC + LDLS NRL + F + LK L+ + N L T+P +M+ +L L + N L + +L E+ ++ L A + AI++++ P+ L+ L LDLSNN+I +P G H+K L+GN +R ++ GT+ V +YLRS+I+ +
Sbjct: 99 DDLRLLPALTVLDIHD------NQLTSLPSAIRELDNLQKLNVSHNKLKILPE---EITSLKNLRTLHLQHNELTCIPEGFEHLSC---LEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSME-SLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDD 372
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrd1 (leucine rich repeats and death domain containing 1 [Source:MGI Symbol;Acc:MGI:3045299]) HSP 1 Score: 122.094 bits (305), Expect = 4.495e-28 Identity = 141/519 (27.17%), Postives = 234/519 (45.09%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLS----------------------SLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAH--------ELNSTG---------------SLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLG--LELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
+IP EI L+ LN S N+I+ +P+ + L +++Q++L +N + LP+ L LE L L N ++IPD++ + L+ L++ YN+L K++C L L +++ N I PK++ + E L ++ N +T V P +KELH+ +N++ +S IS+ N+ L++S NN+ ELP +I LK L QL V+ N + ++ + ++ + +L GN T + + ++ R N +I FP L L S GN IS + +D ELN LDL+ I +IP + + V+ L NK FP + S ++ LD+S N+L ++ + ++ LNL+ N P ++ TL L ++ LPE + ++ LK LN S AI I PKN L+ L SNN+I +P F E ++ +L GN +
Sbjct: 196 SIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQI-----THVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMV---SLHVLILSDNKFESFPKELCSLK-NLRVLDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQ-TLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDI-PKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNM 703 HSP 2 Score: 112.079 bits (279), Expect = 7.240e-25 Identity = 122/438 (27.85%), Postives = 211/438 (48.17%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEV--LKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPL 1670
+ +L L+ N ++ +S I L L+L N L++IP +I L L+LS N I LP+ I L +L+Q+ + N + + E L ++ +L+ S N+ +H+P I N K+ R+ ++YN + P +C L++L Y + N ISE P D+ S ++ L++N N +T+F + LT +L+ L + NQI T+ S IS + ++++L +S N P E+ LK L LD+S N L IP + + +Q L + N F T+FP + + ++E ELN + + S + +T +PE E+ ++K++N+ +N + + P IG L S+V+ S N++ L F L++L+L GN + LP + ++L + NPL
Sbjct: 345 IKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLT-NLEYLDLAKNQIMTIPSC-ISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLNLSNNIF----------------------------TNFP-VELCQLQTLE---------------ELNISQT---SGKKLTRLPE---EVSHMTQLKILNISNNAIKDIPKNIGELR---SLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKL-SSLKEINFDDNPL 726 HSP 3 Score: 99.7525 bits (247), Expect = 4.942e-21 Identity = 127/477 (26.62%), Postives = 222/477 (46.54%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDN---NQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIE--SEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIR 1886
+ P +I + ++YL L KN+I + Q I G+ LL LE+L L N S IP I F LK L+ SYN++ ++PK + +L+ + ++ N I P L+ E L + NM+T P S SLK L I N NQ+T S + ++P +N L ++ N + LP E+ +LK L L + N L + + + ++ L + N +I+ I + E+ R L N+ + S P +N +E S + N+I L +L + L ++ + ++ E E+ I ++ N++ PI I +C I ++L++N ++ SL L+ NGNY+ +P + K L+ LE+ N L + + + +L NL+YL+ + I+ I P + L L LS+N+ E P E +++++ ++ NK++
Sbjct: 148 QEFPVDIVKVKYVKYLYLDKNQIK----------NFQGIDPGD------------LLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDS--LSSLKNLRILNLEYNQLTIFSK-SLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAIS-PKIENFKEL--RLLNLDKNL--LQSIPKKISHCVN-LESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTE---EISHLSNIHILEFSGNQITHVPIEIKNCR-KITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLH-LELNRNKLTV-FSKHLCSLTNLEYLDLAKNQIMTI-PSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQ 586 HSP 4 Score: 52.7582 bits (125), Expect = 1.859e-6 Identity = 49/166 (29.52%), Postives = 74/166 (44.58%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIY-------------------FDVSQNKISEFPKDLDASFEVLKVNINMITL---FPVSRLTP 914
+P+E+ + QL+ LN+S N I +P++IG L L NN + LP+ F L L+ LDL N + +P I LK ++ N L + P ICK K + F++ N I+E +FE L+ +NM + PV TP
Sbjct: 637 LPEEVSHMTQLKILNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSLKEINFDDNPLMRPPMEICKGKEMHMITCYLQRADERDEKILEKIFNIVANSITE------TNFEFLQQKLNMASSANNMPVRPTTP 796
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc1 (leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]) HSP 1 Score: 114.775 bits (286), Expect = 2.016e-26 Identity = 87/263 (33.08%), Postives = 137/263 (52.09%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
L +LD+S N I ++ E I F L D N L +P+ +L L L+++ + LPE+IG L +L + L NLL LP +L LE LDL NNE ++P++IG + LK L + N+L +LP+ I LK L+ DVS+N++ P+++ S L ++ N++ P L L +D N++T L I N+ L +++N ++ LP I LK L L+ N L S+P +G +L + C+ N
Sbjct: 39 LVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPE-AIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDN 300 HSP 2 Score: 99.3673 bits (246), Expect = 2.324e-21 Identity = 105/361 (29.09%), Postives = 159/361 (44.04%), Query Frame = 3
Query: 630 EFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL------------DASFEVLKVNI-------------NMITLFPVSRLTP--SLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
+F +L+ L L LS+NE +P I NF++L L +S N + ++P++I KAL D S N ++ P+ D S + L NI N++T P S LT L+EL + NN+I L I + ++ L + N + ELP EI +LK L+ LDVS N L +P + + +L L + N + I G LK+ + + +T P EA D L L L+ + ++P++ + K KK+ +N NKLV P I C S+ + NRL L + V L L++ GN L LP S TT+K
Sbjct: 9 QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDS-LTQLRRLEELDLGNNEIYNLPE-SIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLET-----IPEGIGKLKKLSILKLDQNRLTQLP------------EAIGDCENLT----------ELVLTENRLLTLPKS---IGKLKKLSNLNADRNKLVSLPKEIGGCC-SLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLK 336 HSP 3 Score: 72.7886 bits (177), Expect = 7.734e-13 Identity = 54/157 (34.39%), Postives = 78/157 (49.68%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFE--VLKVNINMITLFPVSRLTPSLKELHIDNNQ 947
+P+EI L L YL +S+N + +PE IG L L + L N L LP +L L L+ N +P +IG KL L+ NKL LPK I +L F + N+++ P ++ + E VL V N + P+S T LK L + +NQ
Sbjct: 190 LPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLKLKALWLSDNQ 346 HSP 4 Score: 70.4774 bits (171), Expect = 3.519e-12 Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query: 1389 PENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
P + + F+ K++ + L N++ P I + +V LD+S N + E+ + +L+ + +GN L LPESF ++N L L V N + L+ LPE I NL NL L + + P + +L+ L ELDL NNEI +P G H+K LDGN++
Sbjct: 4 PSSAKQFFQLVKLRKLGLSDNEIQRLPPEIAN-FMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQN-LTCLSV--NDISLQSLPENIGNLYNLASLELRENLLTYL-PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 164 HSP 5 Score: 66.2402 bits (160), Expect = 8.387e-11 Identity = 86/295 (29.15%), Postives = 122/295 (41.36%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
L +S N + LP EI + LV+LDVS N++ IP ++ LQV GNP + SFP L L S+ NDIS + S+PEN L+ ++ L N L P L+ + LDL N + L + + LK L L+GN L LP+ +KN L L+V+ N L LPE I L +L YL S + I P+ +LK L+ L L N + +P G CE++ L N++
Sbjct: 19 LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPE------------------------SFPELQNLTCLSV-----NDIS---------------------LQSLPENIGNLYNLASLE---LRENLLTYLPDS-LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLL-CLDVSENRLE-RLPEEISGLTSLTYLVISQNLLETI-PEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRL 256 HSP 6 Score: 65.0846 bits (157), Expect = 2.095e-10 Identity = 90/398 (22.61%), Postives = 157/398 (39.45%), Query Frame = 3
Query: 708 NFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSL--HISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
+KL++L +S N++++LP I L+ DVS+N I E P+ + + +V + N +T P S P L+ L + +L SL +I + N+ L + +N + LP+ + L+ L +LD+ N ++++P ++G + L+ L +D GN +S L + L + LD+S + +PE E+ + + + N L P GI + L L NRL +L + +L L L N L TLP+S +K L LNA +V + PK LT + +N + +P E + + ++ GN++ H
Sbjct: 12 QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPES--FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLD--------------------------------------------------GNQLSELPQEIGNLKNLLCLDVSENRLERLPE---EISGLTSLTYLVISQNLLETIPEGI-GKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLK-------------------------KLSNLNADRNKLVSL-PKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHH 327
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc1 (leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]) HSP 1 Score: 114.005 bits (284), Expect = 5.158e-26 Identity = 87/263 (33.08%), Postives = 137/263 (52.09%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
L +LD+S N I ++ E I F L D N L +P+ +L L L+++ + LPE+IG L +L + L NLL LP +L LE LDL NNE ++P++IG + LK L + N+L +LP+ I LK L+ DVS+N++ P+++ S L ++ N++ P L L +D N++T L I N+ L +++N ++ LP I LK L L+ N L S+P +G +L + C+ N
Sbjct: 84 LVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPE-AIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDN 345 HSP 2 Score: 93.2041 bits (230), Expect = 2.644e-19 Identity = 102/381 (26.77%), Postives = 174/381 (45.67%), Query Frame = 3
Query: 579 HLQQIILGNNLLKLLPTEFCRLL-SLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSL--HISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI--------NRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPIN-----SIESEAG------------NDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
H++ I + L +P E R SLE L L N+ +P+ +KL++L +S N++++LP I L+ DVS+N I E P+ + + +V + N +T P S P L+ L + +L SL +I + N+ L + +N + LP+ + L+ L +LD+ N ++++P ++G + L+ L +DGN + N + L+R E+I+ SL L I+ +I G N ++ L + + L L+ + ++P++ + K KK+ +N NKLV P I C S+ + NRL L + V L L++ GN L LP S TT+K
Sbjct: 13 HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPES--FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL------PEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKS---IGKLKKLSNLNADRNKLVSLPKEIGGCC-SLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLK 381 HSP 3 Score: 74.3294 bits (181), Expect = 2.313e-13 Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 3
Query: 1374 NITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
+ +PE +F+L K +K+ L N++ P I + +V LD+S N + E+ + +L+ + +GN L LPESF ++N L L V N + L+ LPE I NL NL L + + P + +L+ L ELDL NNEI +P G H+K LDGN++
Sbjct: 47 QLRELPEQFFQLVKLRKL---GLSDNEIQRLPPEIAN-FMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQN-LTCLSV--NDISLQSLPENIGNLYNLASLELRENLLTYL-PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209 HSP 4 Score: 73.9442 bits (180), Expect = 3.802e-13 Identity = 95/329 (28.88%), Postives = 137/329 (41.64%), Query Frame = 3
Query: 897 VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
+ R SL+EL +D NQ+ L + + L +S N + LP EI + LV+LDVS N++ IP ++ LQV GNP + SFP L L S+ NDIS + S+PEN L+ ++ L N L P L+ + LDL N + L + + LK L L+GN L LP+ +KN L L+V+ N L LPE I L +L YL S + I P+ +LK L+ L L N + +P G CE++ L N++
Sbjct: 31 IYRYARSLEELLLDANQLRELPEQFFQLV-KLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPE------------------------SFPELQNLTCLSV-----NDIS---------------------LQSLPENIGNLYNLASLE---LRENLLTYLPDS-LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLL-CLDVSENRLE-RLPEEISGLTSLTYLVISQNLLETI-PEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRL 301 HSP 5 Score: 72.0182 bits (175), Expect = 1.211e-12 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFE--VLKVNINMITLFPVSRLTPSLKELHIDNNQ 947
+ +P+EI L L YL +S+N + +PE IG L L + L N L LP +L L L+ N +P +IG KL L+ NKL LPK I +L F + N+++ P ++ + E VL V N + P+S T LK L + +NQ
Sbjct: 233 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLKLKALWLSDNQ 391
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrriq4 (leucine-rich repeats and IQ motif containing 4 [Source:MGI Symbol;Acc:MGI:1915557]) HSP 1 Score: 112.849 bits (281), Expect = 1.602e-25 Identity = 112/399 (28.07%), Postives = 179/399 (44.86%), Query Frame = 3
Query: 483 IPDEIC-DLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISY--IPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPL 1670
IP IC L L LS+N + LPE I L++I L N ++ P + C L +LEV+DL N+ IP IG+ ++L++ ++ N L LP+++ + L D++ N I P L+ E+ +V ++ L V RL S LH+ + T+L L S+ + N+ L +S+N++ P +I LK L L + N + +P ++ + L++L + GN S E+I S SL L I G D GS ++S+PEN L K++ + N N+L + P L ++ LD N L +L D +L+ L L N L LPE+ + N L L + +NP+
Sbjct: 154 IPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFP---------------------EEIFSLISLEKLYI-------GQD-------------QGS------KLSSLPENIKRLMNLKELYIEN---NRLEQLPAS-LGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCLPENLDHLVN-LKVLTLMNNPM 500 HSP 2 Score: 92.4337 bits (228), Expect = 5.854e-19 Identity = 83/312 (26.60%), Postives = 145/312 (46.47%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP----------------------------VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLR 1220
L +DL N +K + DI L L + +N+L ++P+ + ++L L+L+ N I LP S+ L L ++ L N L+ +P C +SL +L L N + D+ I L+ L +S N +E P IC LK L + NK+ + P + ++ ++L + N + FP + RL +LKEL+I+NN++ L + + +PN+ +L N + +LP+ I + L +L + N L +P L ++ L+VL + NP G E + ++L+
Sbjct: 211 LEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLM-NLKELYIENNRLEQLPA-SLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCLPENLDHLVNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLK 520 HSP 3 Score: 82.8037 bits (203), Expect = 6.134e-16 Identity = 125/500 (25.00%), Postives = 224/500 (44.80%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFS----HIPDAIGNFIKLKRLSISYNKLEKLPKNICK-LKALIYFDVSQNKISEFPKDL--DASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNL---NGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLR 1943
KTIP EI L +L ++L N+I +P+ I L + + + L NN L+ L E L SLE LDLS N H+ + L+ L + L ++P ICK L L F +S+N + P+++ + + N +FP +L+ + +D N++ ++ I ++ + ++ N+++ LP + L LD++ N++HS+P +L + L + + GN + R + S + YLR S SF L L LDLS +I P ++ K ++++ L NK+ + P I S ++ L L+ N LL + +SL+ L + G+ L +LPE+ + N L L + +N L +LP + + NL+ L+ + + + P R + L EL L +N + +P ++K+ L N + P + + G E ++++L+
Sbjct: 59 KTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLSGNPLVISSLHV---VSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPG-DIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRL-LCSWVSLHLLYLRNTSLHGLRDSFKRLINLRF--------------------------LDLSQNHIEHFP---VQICALKNLEILALDDNKVRQLPPSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMN-LKELYIENNRLE-QLPASLGLMPNLEVLDCRHNLLKQL-PDAICRTRNLRELLLEDNLLCCLPENLDHLVNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLK 520 HSP 4 Score: 62.7734 bits (151), Expect = 1.059e-9 Identity = 65/232 (28.02%), Postives = 106/232 (45.69%), Query Frame = 3
Query: 348 RNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNE---FSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELP 1034
R+S+ + L LDLS NHI+ P +IC L L L L NK+ LP SI L++L+ + L N L P E L+SLE L + ++ S +P+ I + LK L I N+LE+LP ++ + L D N + + P DA + R T +L+EL +++N + L ++ ++ N+ +LT+ N +++ P
Sbjct: 317 RDSFKRLINLRFLDLSQNHIEH-----------------------FPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLP---DA----------------ICR-TRNLRELLLEDNLLCCLPE-NLDHLVNLKVLTLMNNPMVDPP 504
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q5ZLN0|LRC40_CHICK (Leucine-rich repeat-containing protein 40 OS=Gallus gallus OX=9031 GN=LRRC40 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.868e-87 Identity = 191/588 (32.48%), Postives = 322/588 (54.76%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDEIPTDIYNIN--RPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIE--SEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+ +I ARK+G L L G E+P ++ IN P++ F + DR WWE LTKL L+SN ++ +SED+R L L LD+ +N L ++P + L L+ L++S NK+ +PE + L+HL+ ++L +N L LP F +L+SLE LDLSNN + IP + I L RL+++ N+L+ LP +I +K+L D ++N + P +L AS E L + N + P LKELH NQI L++ ++ ++ ++++L + N + +P+EI L+ L +LD++ N++ +PY LGN+ L+ L ++GNP R+I R + GT+ L +YLR+R ++D + P+ P P+ ++ SE+ I+ H + + LD S + + IP++ F + + VN N+L P I+ S+ ++ FN++ +S L L++ N L +LPE + L + ++ N + P V++ ++ L+ + S + I+P +++ L LDL NN++ +PPE G CE ++ L+GN R P ++ GT V EYLRS+I
Sbjct: 29 QGLIRAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNL-SFGAADR--WWEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSR--IQDDKASPNEEP-PVTAMTLPSES-------RINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEAL-TRLQVINLSFNRFKV-FPSVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRI 601 HSP 2 Score: 89.3521 bits (220), Expect = 4.349e-17 Identity = 96/326 (29.45%), Postives = 143/326 (43.87%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN-----PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
L ++ N + L ++ L L LDV N L S+P ALG ++ LQ L V N +SI E++ L L + N++S L +L S LDLSN ++T IP+++ L ++ NL N+L + P I S S+ LD + N L + SL+ L L N LR+LPE + L L N + I N NLK+LN+ + N P L+ L LDL+NN+I +P G +K L+GN +R + GT+ + +YLRS+IQ +
Sbjct: 87 LILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIP---------------------EELLQLSHLKGLLLQH------NELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRL---NLACNQLKDLPADI-SAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLPELPSC--KLLKELHAGENQIE------ILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDD 373
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q7SXW3|LRC40_DANRE (Leucine-rich repeat-containing protein 40 OS=Danio rerio OX=7955 GN=lrrc40 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.818e-86 Identity = 196/588 (33.33%), Postives = 315/588 (53.57%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDI---SVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ ARK+G L L G E+P ++ N++ P + + F +EDR WWE LTKL LSSN ++ + +D++ L L+ LD+ +N L ++PD I DL QL+ L LS NK+T LP + L +L+ + L NL++ +P + +L++L+ LDLSNN IP+++ N L +L +S NKL+ LP I ++K L D S+N++ P L S E L + N + P +LKELH NNQI L + H+ ++ +++L + N V LP EI L+ L +LD++ N++ S+P LG + L+ L ++GNP R+I R +T GT L +YLR+R + P ++ E + S I+ H + + +LD S + +IP++ F+ + VN N+L P I+ S+ ++L FN+L + F H L ++L N L +LP + L ++ ++ N PEV++ + +L+ + S + I+ L L+ LDLSNN+I +PPE G C ++ LDGN R+P + GT+ V EYLRS+I
Sbjct: 28 GLLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNV-SFGAEDR--WWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSR-----------VQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIK-LRSVILSFNRFK-SFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSRI 599 HSP 2 Score: 85.5001 bits (210), Expect = 7.225e-16 Identity = 94/326 (28.83%), Postives = 145/326 (44.48%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILK--RYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN-----PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L +S N + +P+++ L LV LD+ N L S+P ++G+++ LQ L + N T + SG L R L + N+ I P D +L + LDLSN ++ IPE+ L K+ +L NKL P I S ++ LD S N++ + V SL+ L L N LR LPE TL L +N + + +LK+LNA + N P+ L+ L LDL+NN+I +P G +K +L+GN +R ++ GT + +YLRS++Q
Sbjct: 85 LLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKL-----TELPSGVWRLTNLRCLHLQQNL--IEQIPR----------------------DLGQLVNLDELDLSNNHLIDIPESLANLQNLVKL---DLSCNKLKSLPPAI-SQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPE--LPCCKTLKELHCGNNQIE------VLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQ 369
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q6GPJ5|LRC40_XENLA (Leucine-rich repeat-containing protein 40 OS=Xenopus laevis OX=8355 GN=lrrc40 PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.543e-84 Identity = 196/604 (32.45%), Postives = 311/604 (51.49%), Query Frame = 3
Query: 165 PNNEQVSFAFKVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAP------LPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
P ++ + F +I ARK+G L L G E+P ++ IN D ++ D + WWE LTKL L+SN ++ +SEDI L L+ LD+ +N + ++P I +L L+ LN+S NKI LP + L +L+ +L +N L+ LP L LE LD+SNN + ++G L + ++S NKL LP I K+K L D + N + P + S E L + N +T P LKELH+ NNQI TL H+ + ++++L + N + LP EI LK L +LD+S N++ S+P LG++ L+ L +DGNP R I R + GT+ L +YL+ R D+T+ + P LP +S+ I+AH + + +L+ + + IPE F I VN N+L E P I+ S+ ++L FN++ +S + L L++ N L +LP + L ++ ++ N P+V++ + NL+ + S I I+P ++ L+ LDL NN++ IPP G CE ++ +L+GN R+P T ++ GT + EYLRS+I
Sbjct: 20 PKEQESAVPF-----GLIKAARKSGQLNLSARGLTEVPVSVWRINV-DTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDTAMTLPSDSV------------INAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEAL-TRLQSIILSFNRFK-HFPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEYLRSRI 603 HSP 2 Score: 76.6406 bits (187), Expect = 4.129e-13 Identity = 80/284 (28.17%), Postives = 122/284 (42.96%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILS----------CAFSI----------VTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN---------------------TLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQS 1958
EDI+ P+L L I+ N I+ L EL + L++S+ I +P EL + +K L HN+L E P IG LS C S+ V +LS N+L L +L+ L+ N L +P S M++ L L V +N + PE + NL +L L Y + ++ PK LK L LDLSNN+I +P G ++K LDGN +R ++ GT+ + +YL+ ++Q+
Sbjct: 99 EDISLLPALVVLDIHD------NQIASLPCAIRELTNLQKLNISHNKIKQLPN---ELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVL-PKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQT 372
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q9H9A6|LRC40_HUMAN (Leucine-rich repeat-containing protein 40 OS=Homo sapiens OX=9606 GN=LRRC40 PE=1 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.318e-81 Identity = 196/613 (31.97%), Postives = 331/613 (54.00%), Query Frame = 3
Query: 150 ARISPPNNEQVSFAFKVPGKN--------IIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+R+ + + FK G++ ++ ARK+G L L E+P ++ IN P++ F + +R WWE LTKL +S+N ++ +++D+R L L LD+ +N L ++P I +L L+ LN+S NK+ +LPE I L +L+ + L +N L + F +L +LE LDLSNN + +P + + L RL++S N+L+ LP I ++K L + D + N + P +L S E+L + N + P LKELH+ NQI L + H+ ++ +I +L + N + +P+EII L+ L +LD+S N++ S+PY+LGN+ L+ L ++GNP R+I R I+ GT+ + +YLR++ +D S A ++ SE+ ++ H + + LD S++ T IP+ F+ K + +N N+L E P ++ + +DLSFN+L +S L L+L N+L +LPE ++ L T+ ++ N + LPEV++ + L+ + S + ++P+ ++ LT LDL NN++ IPPE G C +++ LDGN R P + GT + EYLR +I
Sbjct: 2 SRLKRIAGQDLRAGFKAGGRDCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNL-SFGATER--WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIK-DDGPSQSESATETAMTLPSES-------RVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVR-LQTINLSFNRFKM-LPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 600 HSP 2 Score: 82.0333 bits (201), Expect = 7.134e-15 Identity = 100/357 (28.01%), Postives = 160/357 (44.82%), Query Frame = 3
Query: 918 LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN---------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
L +L I NN++ +L+ + +P + +L I N + LP+ I +L+ L +L+VS N L +P + N+ L+ L + N T I+ G E L SN+ED LDLSN ++T++P ++ L ++ NL N+L P I + + LD + N L + SL+ L L N LR LPE F + + L L V N + + E +LK+LN+ I++++ P + L+ L LDLSNN+I +P G H+K L+GN +R +S GT+ V +YLRS+I+ +
Sbjct: 84 LTKLIISNNKLQSLTD-DLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNEL-----TCISEGFEQL-------SNLED--------------------------------------LDLSNNHLTTVPASFSSLSSLVRL---NLSSNELKSLPAEI-NRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPE-FPSC-SLLKELHVGENQIEMLEAE------HLKHLNS----ILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 372
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q4R3P6|LRC40_MACFA (Leucine-rich repeat-containing protein 40 OS=Macaca fascicularis OX=9541 GN=LRRC40 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 5.784e-80 Identity = 192/600 (32.00%), Postives = 324/600 (54.00%), Query Frame = 3
Query: 189 AFKVPGKN--------IIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
FK G++ ++ ARK+G L L E+P ++ IN P++ F + +R WWE LTKL +S+N ++ +++D+R L L LD+ +N L ++P + +L L+ LN+S NK+ + PE I L +L+ + L +N L + F +L +LE LDLSNN + +P + + L RL++S N+L+ LP I ++K L + D + N + P +L S E+L + N + P LKELH+ NQI L + H+ ++ +I +L + N + +P+EII L+ L +LD+S N++ S+PY+LGN+ L+ L ++GNP R+I R I GT+ + +YLR++ + + S A + ++ SE+ ++ H + + LD S++ T IP+ F K I +N N+L E P ++ + ++LSFN+L +S L L+L N+L +LPE ++ L T+ ++ N + LPEV++ + L+ + S + ++P+ ++ LT LDL NN++ IPPE G C +++ LDGN R P + GT + EYLR +I
Sbjct: 15 GFKAAGRDCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNL-SFGATER--WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAM-TLPSES-------RVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVR-LQTINLSFNRFKM-LPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRI 600 HSP 2 Score: 78.9518 bits (193), Expect = 7.770e-14 Identity = 98/357 (27.45%), Postives = 158/357 (44.26%), Query Frame = 3
Query: 918 LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN---------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
L +L I NN++ +L+ + +P + +L I N + LP+ + +L+ L +L+VS N L P + N+ L+ L + N T I+ G E L SN+ED LDLSN +T++P ++ L ++ NL N+L P I + + LD + N L + SL+ L L N LR LPE F + + L L V N + + E +LK+LN+ I++++ P + L+ L LDLSNN+I +P G H+K L+GN +R ++ GT+ V +YLRS+I+ +
Sbjct: 84 LTKLIISNNKLQSLTD-DLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNEL-----TCISEGFEQL-------SNLED--------------------------------------LDLSNNRLTTVPASFSSLSSLVRL---NLSSNQLKSLPAEI-NRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPE-FPSC-SLLKELHVGENQIEMLEAE------HLKHLNS----ILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 372
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A1S3H9B6 (leucine-rich repeat-containing protein 40 OS=Lingula unguis OX=7574 GN=LOC106153271 PE=4 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.248e-89 Identity = 202/588 (34.35%), Postives = 327/588 (55.61%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRR-IGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLP-INSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
K ++ AR++G L L N + +P +++ NI+ P++ + I + ++EDR WWE V LTKL L+SN + +SE+I+ L L +D +N + ++P+ + L +L L LS N++T +P + L LQ + + +N L LP + L LE +D SNN+ + +P IGN K+ + +I+ NKL +P I ++ AL D + N+I P +L A E L + N +T P+ +LKELH+ NN I +L+ H+ + ++ L + N + +P EI L+ L +LD+ N++ S+PY +GNM+ L+ + +DGNP +SI R + GT LK+YLR+R E+ PS AP + S + +G +DAH ++ SLD SN+ + +P + +EL + VN+ N +P ++ ++ L+L FNR+ LS L +L+L N L TLP+ ++++N L + +A N L L LP V++ LV L+ + A I I+ +RL+ L LDLSNN+I IPPE G C ++ L GN R+P ++ GT + EYLR +I
Sbjct: 31 KTLLKQARQSGQLNLSNRALEAVPEEVWRVNIDVPEEAQNITLD--NTEDR--WWEQVDLTKLILASNRLTSISENIKLLPALSVIDAHDNLISSLPEALGQLTELVKLVLSHNQLTSVPSCVCQLRKLQILHISHNNLMELPNDIGELYYLEDVDFSNNKLTLLPRTIGNLTKVMKFNIANNKLANMPPEIGEMNALRILDATHNEIHSLPDELGYLAHLEQLFLRHNRLTHLPLLERCTALKELHLGNNAIPSLTPAHLECLQAVSFLDVRDNKLTVIPAEITILQDLERLDLCNNDISSLPYEMGNMNKLKAIILDGNPLKSIRRDIVMRGTNELKKYLRSRIATEEA---PSKAPQKGVKSQQGGSGVIGGGEGVDAHTVSQLKSLDYSNKQASDVPPDVWELAASSGVNSVNMSKNAFTMWPENLVLLVDTLEDLNLGFNRISALSTDVGLCHKLVSLDLRNNQLTTLPQEMSSLQN-LRFITLACNRLKL-LPPVLYELVKLESILACDNQINSIDVPGLLRLRELATLDLSNNDIMQIPPELGNCTSLRSLQLGGNPARNPRPAILAKGTVALLEYLRDRI 609
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: H2LB92 (Leucine rich repeat containing 40 OS=Oryzias latipes OX=8090 GN=lrrc40 PE=4 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 1.818e-87 Identity = 197/590 (33.39%), Postives = 315/590 (53.39%), Query Frame = 3
Query: 195 KVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSF--PSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+VP ++ ARK+G L L ++P +Y +N ++ + F + DR WWE LTKL LSSN I ++SEDIR L L+ LDL +N L T+ I +L +L+ L LS N+++ LP + L +L+ + L NLL+ LP EF +L +L LDLS N + +P ++G L+++S+S+NKL LP + +L + D S N++S+ P L S E L + N + P P+LKEL++ NNQ+ L + + + I++L + N + +P ++ L L +LD++ N++ S+P +L + L+VL V+GNP R I R +T GT L +YLR R E +S P+ P S I+ H + + G LD S+ + SIP+ F + + + N NKL P +L + S+ L+L FN+L + L L+L N L+ LP + L + +++N PEV++ + +++ + + + ++P RL+ L+ LDLSNN++ IPPE GLC ++ +L GN R P V+ GT+ V EYLRS+I
Sbjct: 25 EVPA-GLLKAARKSGQLNLSGRALTKVPQSVYRVNEEAQQNVS---FGASDR--WWEQTDLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLH-APALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFP------------SQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAK-LRCIILSYNRFK-SFPEVLYQMFSMETVLMANNQVSSVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRI 593 HSP 2 Score: 82.4185 bits (202), Expect = 2.029e-12 Identity = 86/324 (26.54%), Postives = 152/324 (46.91%), Query Frame = 3
Query: 987 NINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI-LKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
++ L +S N + ++ +I L LV LD+ N L+++ A+G + LQ L + N S+ E+ + R LR+ + +++ + ++ E G +L + LDLS +T +P++ L +KI +L HNKL P LS ++ LD S N+L ++ H +SL+ L+L N L+ LP+ L L V +N +G+ E + L + L I + P+ L LT LDL+NN+I +P L ++K+ ++GN +R ++ GT + +YLR +++
Sbjct: 78 DLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL-------PVEVCMLRNLRSLTLQQNL----------LENLPEEFG-----------QLENLTELDLSKNRLTDLPQSLGRLTGLQKI---SLSHNKLSCLP-DCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAP---ALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAV-PEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVK 365
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A452IT35 (Leucine rich repeat containing 40 OS=Gopherus agassizii OX=38772 GN=LRRC40 PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 2.253e-87 Identity = 203/613 (33.12%), Postives = 329/613 (53.67%), Query Frame = 3
Query: 144 SSARISPPNNEQVSFAFKV--PG----KNIIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++AR + + F PG + +I ARK G L L E+P +++ IN P++ F + DR WWE LTKL L+SN ++ +SED+R L L LD+ +N L +IP I L L+ LN+S NK+ +PE + L HL+ ++L +N L LP F +L+SLE LDLSNN+ IP + + L RLS+++N+L+ LP I +K+L D ++N++ P +L AS E L + N + P LKELH+ NQI LS+ H+ ++ ++ +L + N + LP+EI L+ L +LD++ N++ S+P ALGN+ L++L ++GNP R+I R + GT+ L +YLR++ +DITS +P+ ++ SE+ I+ H + + L+ S + IP+ F K + VN N+L E P I+ S+ ++L FN+L +S L L++ N+L +LPE + L + + N + P V++ + L+ + S + I+P ++ L +DL NN++ +PPE G C +++ L+GN R P ++ GT V EYLRS+I
Sbjct: 2 AAARRGRAGDPRAGFRRDAGEPGPAVPQGLIRAARKNGQLNLAGRDLSEVPANVWRINLDIPEEAHQNL-SFGATDR--WWEQTDLTKLILASNKLQCLSEDVRLLPALTVLDVHDNQLTSIPSAIGFLENLQKLNVSHNKLKNIPEELTQLRHLKSLLLQHNELSHLPDGFGQLISLEELDLSNNQLETIPSSFASLTSLVRLSLAHNQLKNLPAEISAMKSLKQLDCTKNQLETIPSELASMASLEQLYLRKNKLQYLPEFPSCKLLKELHVGENQIEVLSAEHLKHLNSLCVLELRDNKLKSLPDEITLLQGLERLDLTNNDISSLPCALGNLPQLKLLALEGNPLRTIRRDMLQKGTQELLKYLRSKIQ-DDITSPNEGSPVTAMTLPSES-------RINIHAITALKVLEYSEKRAAVIPDEIFNAVGSKSVTTVNFSKNQLNEIPKRIVELKESVCDVNLGFNKLSSISLELCTLHKLTHLDIRNNFLTSLPEEMEALIR-LQIINLCFNRFKI-FPNVLYRIPTLETVLLSNNQVGSIDPLQLRKMDKLGTIDLQNNDLLQVPPELGNCVNLRTLLLEGNPFRTPRGAILAKGTAAVLEYLRSRI 601 HSP 2 Score: 89.7373 bits (221), Expect = 1.036e-14 Identity = 95/328 (28.96%), Postives = 149/328 (45.43%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL 1964
L ++ N + L ++ L L LDV N L SIP A+G ++ LQ L V N ++I E++T L L + N++S L +L S LDLSN + +IP ++ L ++ +L HN+L P I S S+ LD + N+L + SL+ L L N L+ LPE F + K L L V N + + + +LK+LN S C + + + P L+ L LDL+NN+I +P G +K+ L+GN +R + GT+ + +YLRS+IQ ++
Sbjct: 87 LILASNKLQCLSEDVRLLPALTVLDVHDNQLTSIPSAIGFLENLQKLNVSHNKLKNIP---------------------EELTQLRHLKSLLLQH------NELSHLPDGFGQLISLEELDLSNNQLETIPSSFASLTSLVRL---SLAHNQLKNLPAEI-SAMKSLKQLDCTKNQLETIPSELASMASLEQLYLRKNKLQYLPE-FPSCK-LLKELHVGENQIE------VLSAEHLKHLN-SLCVLELRDNKLKSLPDEITLLQGLERLDLTNNDISSLPCALGNLPQLKLLALEGNPLRTIRRDMLQKGTQELLKYLRSKIQDDI 374
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A3P9H4M8 (Leucine rich repeat containing 40 OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 3.513e-87 Identity = 196/590 (33.22%), Postives = 315/590 (53.39%), Query Frame = 3
Query: 195 KVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSF--PSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+VP ++ ARK+G L L ++P +Y +N ++ + F + DR WWE +LTKL LSSN I ++SEDIR L L+ LDL +N L T+ I +L +L+ L LS N+++ LP + L +L+ + L NLL+ LP EF +L +L LDLS N + +P ++G L+++S+S+NK+ LP + +L + D S N++S+ P L S E L + N + P P+LKEL++ NNQ+ L + + + I++L + N + +P ++ + L +LD++ N++ S+P +L + L+VL V+GNP R I R +T GT L +YLR R E +S P+ P S I+ H + + G LD S+ SIP+ F + + + N NKL P +L + S+ L+L FNRL + L L+L N L+ LP + L + +++N PEV++ + +++ + + + ++P RL+ L+ LDLSNN++ IPPE GLC ++ +L GN R P V+ GT+ V EYLRS+I
Sbjct: 25 EVPA-GLLKAARKSGQLNLSGRALTKVPQSVYRVNEEAQQNVS---FGASDR--WWEQTVLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCILRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNHLTDLPQSLGRLTGLQKISVSHNKISCLPNCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLH-APALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAIPEQMSLVHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFP------------SQARINVHSIKTLGVLDYSDMQADSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNRLDHCGVEACRLLQLTHLDLRNNQLKDLPADMENLAK-LRCIILSYNRFK-SFPEVLYQMFSMETVLMANNQVSGVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRI 593 HSP 2 Score: 79.7221 bits (195), Expect = 1.105e-11 Identity = 85/320 (26.56%), Postives = 150/320 (46.88%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI-LKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L +S N + ++ +I L LV LD+ N L+++ A+G + LQ L + N S+ E+ + R LR+ + +++ + ++ E G +L + LDLS ++T +P++ L +KI V HNK+ P LS ++ LD S N+L ++ H +SL+ L+L N L+ LP+ L L V +N +G+ E + L + L I I P+ + LT LDL+NN+I +P L ++K+ ++GN +R ++ GT + +YLR +++
Sbjct: 82 LLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL-------PVEVCILRNLRSLTLQQNL----------LENLPEEFG-----------QLENLTELDLSKNHLTDLPQSLGRLTGLQKISV---SHNKISCLP-NCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAP---ALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAI-PEQMSLVHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVK 365
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A4D9DWC3 (OX-2 membrane glycoprotein OS=Platysternon megacephalum OX=55544 GN=DR999_PMT16796 PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 3.644e-87 Identity = 198/586 (33.79%), Postives = 319/586 (54.44%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDEIPTDIYNINR--PDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+ +I ARK G L L E+P +++ IN P++ F + DR WWE LTKL L+SN ++ +SED+R L L LD+ +N L +IP I L L+ LN S NK+ +PE + L HL+ ++L +N L LP F +L+SLE LDLSNN+ S IP + + L RL++++N+L+ LP I +K+L D ++N++ P +L AS E L + N + P LKELH+ NQI LS+ H+ ++ ++ +L + N + LP+EI L+ L +LD++ N++ S+P ALGN+ L++L ++GNP R+I R + GT+ L +YLR++ +DITS +P+ ++ SE+ I+ H + + L+ S + IP+ F + VN N+L E P I+ S+ ++L FN+L +S L L++ N+L +LPE + L + + N + P V++ + L+ + S + I+P ++ L LDL NN++ +PPE G C +++ L+GN R P ++ GT V EYLRS+I
Sbjct: 29 QGLIRAARKNGQLNLAGRDLSEVPANVWRINLDIPEEAHQNL-SFGAADR--WWEQTDLTKLILASNKLQCLSEDVRLLPALTVLDVHDNQLTSIPSAIGFLENLQKLNFSHNKLKNIPEELTQLRHLKSLLLQHNELSHLPDGFGQLISLEELDLSNNQLSTIPSSFASLTSLVRLNLAHNQLKNLPAEISAMKSLKQLDCTKNQLETIPSELASMASLEQLYLRKNKLQYLPEFPSCKLLKELHVGENQIEVLSAEHLKHLNSLCVLELRDNKLKSLPDEITLLQGLERLDLTNNDISSLPCALGNLPQLKLLALEGNPLRTIRRDMLQKGTQELLKYLRSKIQ-DDITSLNEGSPVTAMTLPSES-------RINIHAITALKVLEYSEKRAAVIPDEIFNAVGSNSVTTVNFSKNQLNEIPKRIVELKESVCDVNLGFNKLSSISLELCVLHKLTHLDIRNNFLTSLPEEMEALIR-LQIINLCFNRFKI-FPNVLYRIPTLETILLSNNQVGSIDPLQIRKMDKLGTLDLQNNDLLQVPPELGNCVNLRTLLLEGNPFRTPRGAILAKGTAAVLEYLRSRI 601 HSP 2 Score: 90.1225 bits (222), Expect = 7.374e-15 Identity = 95/328 (28.96%), Postives = 149/328 (45.43%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL 1964
L ++ N + L ++ L L LDV N L SIP A+G ++ LQ L N ++I E++T L L + N++S L +L S LDLSN +++IP ++ L ++ NL HN+L P I S S+ LD + N+L + SL+ L L N L+ LPE F + K L L V N + + + +LK+LN S C + + + P L+ L LDL+NN+I +P G +K+ L+GN +R + GT+ + +YLRS+IQ ++
Sbjct: 87 LILASNKLQCLSEDVRLLPALTVLDVHDNQLTSIPSAIGFLENLQKLNFSHNKLKNIP---------------------EELTQLRHLKSLLLQH------NELSHLPDGFGQLISLEELDLSNNQLSTIPSSFASLTSLVRL---NLAHNQLKNLPAEI-SAMKSLKQLDCTKNQLETIPSELASMASLEQLYLRKNKLQYLPE-FPSCK-LLKELHVGENQIE------VLSAEHLKHLN-SLCVLELRDNKLKSLPDEITLLQGLERLDLTNNDISSLPCALGNLPQLKLLALEGNPLRTIRRDMLQKGTQELLKYLRSKIQDDI 374
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 294.664 bits (753), Expect = 8.306e-90 Identity = 204/588 (34.69%), Postives = 324/588 (55.10%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDI---SVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ AR++G L L G E+P ++ NI+ P++ + F + DR WWE LTKL LSSN ++ +SED++ L L+ LD+ +N L+T+P I +L QL+ LNLS NK+T LP + L +L+ + L NLL+ LP+E +L LE LDLSNN+ +PD + N L +L++S+N L+ LP I ++K L D S+N++ P L AS E L + N + P +LKELH NNQI L + H+ ++ +++L + N V LP EI L+ L +LD++ N+L SIP LGN+ L L ++GNP R+I R +T GT L +YLR+R E P +++ E + S I+ H + + +L+ S + +IP++ F+ + VN N+L E P I+ ++ L+L FN+L + F+ L ++L N L +LP ++K L ++ ++ N P+V++ +++L+ + S + I+P L L+ LDL NN+I +PPE G C ++ LDGN R+P V+ GT+ + EYLRS+I
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNV-SFSASDR--WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQEE-----------PDGNLKDEPKTAMTLPSQSRINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVPPRIVELKDTLADLNLGFNKLSAVPIEFSKLQQLVHVDLRNNLLTSLPMELESLK--LRSIILSFNRFK-AFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRI 598 HSP 2 Score: 65.855 bits (159), Expect = 1.029e-10 Identity = 94/359 (26.18%), Postives = 145/359 (40.39%), Query Frame = 3
Query: 918 LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPE--SFTTMK------NTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN-----PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L +L + +N++ TLS + +P + +L I N + LP I +L+ L +L++S N + +P L N+ L R L + N+ + + SE G +L LDLSN + +P+ + +NL N L P I S ++ LD S N+L + V SL+ L L N LR LPE S T+K N + LE AH LK+L+A + N P+ L+ L LDL+NN++ IP G + L+GN +R ++ GT + +YLRS+IQ
Sbjct: 82 LTKLLLSSNKLETLSE-DVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNL--------------------------RCLHLQQNL-------------LEQLPSELG-----------QLCQLEDLDLSNNKLIIVPDGLA---NLNNLVKLNLSFNSLKSLPSAI-SEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAH----------------LKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQ 369
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 280.411 bits (716), Expect = 1.352e-84 Identity = 202/589 (34.30%), Postives = 316/589 (53.65%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDI---SVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ AR++G L L G E+P ++ NI+ P++ + F + DR WWE LTKL LSSN ++ +SED++ L L+ LD+ +N L+T+P I +L QL+ LNLS NK+T LP + L +L+ + L NLL+ LP+E +L LE LDLSNN+ +PD + N L +L++S+N L+ LP I ++K L D S+N++ P L AS E L + N + P +LKELH NNQI L + H+ ++ +++L + N V LP EI L+ L +LD++ N+L SIP LGN+ L L ++GNP R+I R +T GT L +YLR+R E P +++ E + S I+ H + + +L+ S + +IP++ F+ + VN N+L E P R++EL D +L LNL N L +P F+ ++ ++ H L + P+V++ +++L+ + S + I+P L L+ LDL NN+I +PPE G C ++ LDGN R+P V+ GT+ + EYLRS+I
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNV-SFSASDR--WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQEE-----------PDGNLKDEPKTAMTLPSQSRINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVP-----------------PRIVELKD------TLADLNLGFNKLSAVPIEFSKLQ------QLVHVDLRFKAFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRI 573 HSP 2 Score: 65.855 bits (159), Expect = 9.039e-11 Identity = 94/359 (26.18%), Postives = 145/359 (40.39%), Query Frame = 3
Query: 918 LKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPE--SFTTMK------NTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN-----PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L +L + +N++ TLS + +P + +L I N + LP I +L+ L +L++S N + +P L N+ L R L + N+ + + SE G +L LDLSN + +P+ + +NL N L P I S ++ LD S N+L + V SL+ L L N LR LPE S T+K N + LE AH LK+L+A + N P+ L+ L LDL+NN++ IP G + L+GN +R ++ GT + +YLRS+IQ
Sbjct: 82 LTKLLLSSNKLETLSE-DVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNL--------------------------RCLHLQQNL-------------LEQLPSELG-----------QLCQLEDLDLSNNKLIIVPDGLA---NLNNLVKLNLSFNSLKSLPSAI-SEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAH----------------LKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQ 369
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 276.559 bits (706), Expect = 4.801e-83 Identity = 197/585 (33.68%), Postives = 317/585 (54.19%), Query Frame = 3
Query: 210 NIIDDARKTGTLTLINFGFDEIPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ AR++G L L G E+P ++ NI+ P++ + F + DR WWE LTKL LSSN ++ +SED++ L L+ LD+ +N L+T+P I +L QL+ LNLS NK+T LP + L +L+ + L NLL+ LP+E +L LE LDLSNN+ +PD + N L +L++S+N L+ LP I ++K L D S+N++ P L AS E L + N + P +LKELH NNQI L + H+ ++ +++L + N V LP EI L+ L +LD++ N+L SIP LGN+ L L ++GNP R+I R +T N++D P ++ S++ I+ H + + +L+ S + +IP++ F+ + VN N+L E P I+ ++ L+L FN+L + F+ L ++L N L +LP ++K L ++ ++ N P+V++ +++L+ + S + I+P L L+ LDL NN+I +PPE G C ++ LDGN R+P V+ GT+ + EYLRS+I
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNV-SFSASDR--WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTVK--------EPDGNLKD-------EPKTAMTLPSQS-------RINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVPPRIVELKDTLADLNLGFNKLSAVPIEFSKLQQLVHVDLRNNLLTSLPMELESLK--LRSIILSFNRFK-AFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRI 584
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc1 (leucine rich repeat containing 1 [Source:NCBI gene;Acc:103023999]) HSP 1 Score: 116.701 bits (291), Expect = 6.197e-27 Identity = 89/280 (31.79%), Postives = 144/280 (51.43%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI 1202
L +LD+S N I ++ + I F L D N L +PD +L L L+++ + LP++IG L +L + L N+L LP C+L LE LDL NNE ++P+ IG + LK L + N+L ++P + +K L+ D+S+NK+ P++ S L V+ N+I P + +L L L D N++ L I ++ L +++N+++ LP I LK L + N L S+P +G +L VLCV N I + ++ TE+
Sbjct: 84 LVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRNLTCLSINDISLQALPDNIGNLCNLVSLELRENMLTYLPESLCQLNRLEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLIDALPEGIGKLK-RLSILKADQNRLVQLPE-SIGSCESLTELVLTENHLMSLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCSSLNVLCVRDNRLSRIP-SELSQATEL 360 HSP 2 Score: 100.908 bits (250), Expect = 6.826e-22 Identity = 102/376 (27.13%), Postives = 164/376 (43.62%), Query Frame = 3
Query: 582 LQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL------------DASFEVLKVNI-------------NMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
L++++L N L+ LP +F +L+ L L LS+NE +P I NF++L L +S N + ++P +I KAL D S N ++ P D S + L NI NM+T P S L+EL + NN++ L I + ++ L + N + E+P E+ +K L+ LD+S N L +P +++L L V N A+ G LKR +++ + P I S ES L L+ ++ S+P + + K KK+ N N+L P I C+ S+ L + NRL + + L +++GN L LP S TT++
Sbjct: 38 LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRNLTCLSINDISLQALPDNIGNLCNLVSLELRENMLTYLPESLCQLNRLEELDLGNNELYNLPE-TIGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLI-----DALPEGIGKLKRLSILKADQNRLVQLPE----SIGSCES------------------LTELVLTENHLMSLPRS---IGKLKKLSNFNCDRNRLTSLPKEIGGCS-SLNVLCVRDNRLSRIPSELSQATELHVFDVSGNRLAFLPMSLTTLR 381 HSP 3 Score: 80.8777 bits (198), Expect = 1.737e-15 Identity = 67/229 (29.26%), Postives = 104/229 (45.41%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDAS-------------------------FEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIP 986
L +LDL +N + + E I L +L L L N L IP E+ + L L+LS+NK+ LPE LN L +++ NL+ LP +L L +L N +P++IG+ L L ++ N L LP++I KLK L F+ +N+++ PK++ V V+ N + P+S T LK L + +NQ L + P
Sbjct: 176 LEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLIDALPEGIGKLKRLSILKADQNRLVQLPESIGSCESLTELVLTENHLMSLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCSSLNVLCVRDNRLSRIPSELSQATELHVFDVSGNRLAFLPMSLTTLRLKALWLSDNQSQPLLTFQTDVDP 404 HSP 4 Score: 75.0998 bits (183), Expect = 1.039e-13 Identity = 91/321 (28.35%), Postives = 139/321 (43.30%), Query Frame = 3
Query: 897 VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHI--DAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHI 1853
+ R + SL+EL +D NQ+ L + + L +S N + LP EI + LV+LDVS N++ IP ++ LQV GNP + + D SFP L L SI NDIS+ + + L + SL+L +T +PE+ L + +++ ++LG+N+L P + VSLK L L+GN L +P +MKN L L+++ N L LPE L +L L S I + P+ +LK L+ L N + +P G CE +
Sbjct: 31 IYRYSRSLEELLLDANQLRDLPKQFFQLV-KLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPL----------------------TRLPD--SFPELRNLTCLSI-----NDISLQALPDNIGNLCNLVSLELRENMLTYLPES---LCQLNRLEELDLGNNELYNLP------------------------ETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLL-CLDLSENKLE-RLPEESAGLNSLTDLLVSQNLIDAL-PEGIGKLKRLSILKADQNRLVQLPESIGSCESL 291 HSP 5 Score: 69.707 bits (169), Expect = 6.124e-12 Identity = 57/183 (31.15%), Postives = 96/183 (52.46%), Query Frame = 3
Query: 1374 NITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH--PALTSVSH 1913
+ +P+ +F+L K +K+ L N++ P I + +V LD+S N ++E+ D + +L+ + +GN L LP+SF ++N L L + N + L+ LP+ I NL NL L + + P++ +L L ELDL NNE+ +P G +K LDGN++ P L S+ +
Sbjct: 47 QLRDLPKQFFQLVKLRKL---GLSDNEIQRLPPEIAN-FMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRN-LTCLSI--NDISLQALPDNIGNLCNLVSLELRENMLTYL-PESLCQLNRLEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKN 221
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc1 (leucine rich repeat containing 1 [Source:NCBI gene;Acc:103023999]) HSP 1 Score: 116.701 bits (291), Expect = 1.083e-26 Identity = 89/280 (31.79%), Postives = 144/280 (51.43%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI 1202
L +LD+S N I ++ + I F L D N L +PD +L L L+++ + LP++IG L +L + L N+L LP C+L LE LDL NNE ++P+ IG + LK L + N+L ++P + +K L+ D+S+NK+ P++ S L V+ N+I P + +L L L D N++ L I ++ L +++N+++ LP I LK L + N L S+P +G +L VLCV N I + ++ TE+
Sbjct: 84 LVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRNLTCLSINDISLQALPDNIGNLCNLVSLELRENMLTYLPESLCQLNRLEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLIDALPEGIGKLK-RLSILKADQNRLVQLPE-SIGSCESLTELVLTENHLMSLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCSSLNVLCVRDNRLSRIP-SELSQATEL 360 HSP 2 Score: 101.293 bits (251), Expect = 8.959e-22 Identity = 102/376 (27.13%), Postives = 164/376 (43.62%), Query Frame = 3
Query: 582 LQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL------------DASFEVLKVNI-------------NMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
L++++L N L+ LP +F +L+ L L LS+NE +P I NF++L L +S N + ++P +I KAL D S N ++ P D S + L NI NM+T P S L+EL + NN++ L I + ++ L + N + E+P E+ +K L+ LD+S N L +P +++L L V N A+ G LKR +++ + P I S ES L L+ ++ S+P + + K KK+ N N+L P I C+ S+ L + NRL + + L +++GN L LP S TT++
Sbjct: 38 LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRNLTCLSINDISLQALPDNIGNLCNLVSLELRENMLTYLPESLCQLNRLEELDLGNNELYNLPET-IGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLI-----DALPEGIGKLKRLSILKADQNRLVQLPE----SIGSCES------------------LTELVLTENHLMSLPRS---IGKLKKLSNFNCDRNRLTSLPKEIGGCS-SLNVLCVRDNRLSRIPSELSQATELHVFDVSGNRLAFLPMSLTTLR 381 HSP 3 Score: 80.8777 bits (198), Expect = 2.158e-15 Identity = 67/229 (29.26%), Postives = 104/229 (45.41%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDAS-------------------------FEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIP 986
L +LDL +N + + E I L +L L L N L IP E+ + L L+LS+NK+ LPE LN L +++ NL+ LP +L L +L N +P++IG+ L L ++ N L LP++I KLK L F+ +N+++ PK++ V V+ N + P+S T LK L + +NQ L + P
Sbjct: 176 LEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLLCLDLSENKLERLPEESAGLNSLTDLLVSQNLIDALPEGIGKLKRLSILKADQNRLVQLPESIGSCESLTELVLTENHLMSLPRSIGKLKKLSNFNCDRNRLTSLPKEIGGCSSLNVLCVRDNRLSRIPSELSQATELHVFDVSGNRLAFLPMSLTTLRLKALWLSDNQSQPLLTFQTDVDP 404 HSP 4 Score: 75.485 bits (184), Expect = 1.054e-13 Identity = 96/321 (29.91%), Postives = 137/321 (42.68%), Query Frame = 3
Query: 897 VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISV--LHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHI 1853
+ R + SL+EL +D NQ+ L + + L +S N + LP EI + LV+LDVS N++ IP ++ LQV GNP + + D SFP L L SI NDIS+ L + L + SL+L +T +PE+ +L N+L E LDL N L L + VSLK L L+GN L +P +MKN L L+++ N L LPE L +L L S I + P+ +LK L+ L N + +P G CE +
Sbjct: 31 IYRYSRSLEELLLDANQLRDLPKQFFQLV-KLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPL----------------------TRLPD--SFPELRNLTCLSI-----NDISLQALPDNIGNLCNLVSLELRENMLTYLPESLCQL-------------NRLEE--------------LDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSMKNLL-CLDLSENKLE-RLPEESAGLNSLTDLLVSQNLIDAL-PEGIGKLKRLSILKADQNRLVQLPESIGSCESL 291 HSP 5 Score: 70.0922 bits (170), Expect = 6.067e-12 Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 3
Query: 1374 NITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH--PALTSV 1907
+ +P+ +F+L K +K+ L N++ P I + +V LD+S N ++E+ D + +L+ + +GN L LP+SF ++N L L + N + L+ LP+ I NL NL L + + P++ +L L ELDL NNE+ +P G +K LDGN++ P L S+
Sbjct: 47 QLRDLPKQFFQLVKLRKL---GLSDNEIQRLPPEIAN-FMQLVELDVSRNDIIEIPDSISFCKALQVADFSGNPLTRLPDSFPELRN-LTCLSI--NDISLQALPDNIGNLCNLVSLELRENMLTYL-PESLCQLNRLEELDLGNNELYNLPETIGCLVSLKDLWLDGNQLAEIPPELGSM 219
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:334130]) HSP 1 Score: 265.003 bits (676), Expect = 3.241e-79 Identity = 182/592 (30.74%), Postives = 311/592 (52.53%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDE--IPTDIY--NINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTR----SNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+ ++ AR +G L L G E +P ++ N++ P++ G S +R WWE LTKL L+SN ++ +S+D++ L L LD+ +N L +P + +L L+ LN+S NK+ LPES+ ++ L + + +N L+ + L LE LDLS+N + +P +G ++ +L+++ NKL +LP I +K L + + N + P L AS + L + N + P +LKELH+ NNQI+ L H+ + I++L + N + ELP+E+ L L +LD++ N++ S+P ALGN+ L+ L ++GNP R+I R I GT+ + ++LR+R + ED + LP S+ G I+A +++ +L S + IP+ FE + + V+ N+L P I+ + +++ FN++ LS +L L+L N L +LP + + L ++ ++ N E+P V++ + L+ L AS I +++ L+ L LDL NN+I ++PP+ GLC ++ L GN+ R P +S GT + EYLR +I
Sbjct: 28 QGLLRAARTSGQLNLAGRGLGEGSVPLAVWRINVDPPEEVARGVVFGASGER--WWEQADLTKLILASNRLRALSDDLQLLPALTVLDVHDNQLTELPQVLGELVNLQKLNVSHNKLQTLPESLWAISSLLSLHVEHNELEGISNNIGNLARLEELDLSSNRLTALPGTLGKLTRVTKLNVAENKLRELPTEIKSMKGLCQLEATHNLLESVPAALGGMASLQQLYLRHNRLKSLPELHNCAALKELHVGNNQISELGPEHLRPLGAISVLDLRDNKLKELPDEVTLLHGLERLDLTNNDISSLPNALGNLGKLKSLALEGNPLRAIRRDIINRGTQEILKFLRSRIEEPTGSEDSPDTVTAMTLP-----SQGG-------INAFTISAQKALHYSGKKAADIPDEVFEAIRGSTVTAVDFSKNQLSTIPPRIVELKDMVTDVNVGFNKISVLSLELCMLGNLTHLDLRNNALSSLPNEMEAL-SRLQSIIISCNRF-REIPPVLYRVGTLETLLASDNQIGVVDATGLRSLERLGTLDLQNNDITVVPPQLGLCVSLRSLLLGGNRFRSPRPALLSKGTATLLEYLRDRI 603 HSP 2 Score: 72.0182 bits (175), Expect = 2.522e-13 Identity = 85/320 (26.56%), Postives = 136/320 (42.50%), Query Frame = 3
Query: 999 LTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEA-GNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
L ++ N + L +++ L L LDV N L +P LG + LQ L V N +++ E + + SL L + E E N+I L LDLS+ +T++P L K ++ +N+ NKL E P I S + L+ + N L + SL+ L L N L++LPE L L V +N + PE + L + L+ + + P L L LDL+NN+I +P G +K L+GN +R ++ GT+ + ++LRS+I+
Sbjct: 89 LILASNRLRALSDDLQLLPALTVLDVHDNQLTELPQVLGELVNLQKLNVSHNKLQTLP---------------------ESLWAISSLLSLHVEHNELEGISNNIG-------NLARLEELDLSSNRLTALPGT---LGKLTRVTKLNVAENKLRELPTEIKSMK-GLCQLEATHNLLESVPAALGGMASLQQLYLRHNRLKSLPELHNCA--ALKELHVGNNQISELGPEHLRPLGAISVLDLRDNKLKEL-PDEVTLLHGLERLDLTNNDISSLPNALGNLGKLKSLALEGNPLRAIRRDIINRGTQEILKFLRSRIE 373
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004940.1 (pep scaffold:Pmarinus_7.0:GL476356:339323:347865:-1 gene:ENSPMAG00000004448.1 transcript:ENSPMAT00000004940.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 112.849 bits (281), Expect = 1.881e-26 Identity = 127/513 (24.76%), Postives = 222/513 (43.27%), Query Frame = 3
Query: 498 CDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDI-TSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFG------------------------LCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
C L+L+K I LP +I L L ++ L N L LPTE L++L L L+ N + +PD + L+ L + +NKL +P + +L +L + N+I++ KD+ + +L V N I L P + L SL L + +NQ+ L I + L + N +++LP+ I +L L +L + +N L ++P L N L+ L ++ N N + + G L + + + ++P P + + SL++ + +I IP F + K + +N+ N+L P+ I + S+V L+L+ N+L ++ D + SL+ L L+ N LR LP ++ L L++ N L LP I L +L+ L + + + P+ L LT L + N++ +P E G LC + I +++ + VS G + +YL+ Q
Sbjct: 46 CKEQNATRLDLAKRSIASLPPNIKELTQLTELYLYGNRLPCLPTEIGCLVNLVTLALNENSLTGLPDTLTGLTSLRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLPAEIGELR-SLLTLDVAHNQLEHLPE-EIGNCVQVTNLDLQHNELLDLPDSIGNLASLNRLGLRYNRLSAVPTTLANCTELEDLNLENN-----NISTLPEGLLSSLVNLSSLTLARNCFQAYPVGGP---------------------SQFTTVYSLNMEHNHIGKIPFGIFS--RAKALSKLNMKDNQLTSLPLDIGTWK-SMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRK-LRELDLEENKLE-SLPNEIAYLKDLQKLVLTNNQLTSL-PRGIGHLCSLTHLMVGENQLTHVPEEIGTLENLEELYLNDNPNLHNLPFELALCSKLLIMSIENCPLSQLPGPIVSSGPSFIIQYLKMQ 524 HSP 2 Score: 110.538 bits (275), Expect = 1.186e-25 Identity = 130/505 (25.74%), Postives = 224/505 (44.36%), Query Frame = 3
Query: 378 TKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDI-TSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
T+LDL+ I + +I+ L+ L L L N L +P EI L L L L++N +T LP+++ L L+ + L +N L+ +P RL SL VL L N + + IGN KL LS+ NK++ LP I +L++L+ DV+ N++ P+++ Q+T L H N +++LP+ I +L L +L + +N L ++P L N L+ L ++ N N + + G L + + + ++P P + + SL++ + +I IP F + K + +N+ N+L P+ I + S+V L+L+ N+L ++ D + SL+ L L+ N LR LP ++ L L++ N L LP I L +L+ L + + + P+ L LT L + N++ +P E G E+++ L+ N H
Sbjct: 52 TRLDLAKRSIASLPPNIKELTQLTELYLYGNRLPCLPTEIGCLVNLVTLALNENSLTGLPDTLTGLTSLRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLPAEIGELRSLLTLDVAHNQLEHLPEEIGNCV------------------------------QVTNLDLQH--------------NELLDLPDSIGNLASLNRLGLRYNRLSAVPTTLANCTELEDLNLENN-----NISTLPEGLLSSLVNLSSLTLARNCFQAYPVGGP---------------------SQFTTVYSLNMEHNHIGKIPFGIFS--RAKALSKLNMKDNQLTSLPLDIGTWK-SMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRK-LRELDLEENKLE-SLPNEIAYLKDLQKLVLTNNQLTSL-PRGIGHLCSLTHLMVGENQLTHVPEEIGTLENLEELYLNDNPNLH 480
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: scrib (scribble planar cell polarity protein [Source:NCBI gene;Acc:368473]) HSP 1 Score: 111.309 bits (277), Expect = 2.357e-25 Identity = 86/264 (32.58%), Postives = 136/264 (51.52%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
L LD+S N I ++ + I+ + L +D N L +P+ L L YL+L+ + LP+ IG L++L + L NLLK LPT L+ LE LDL NNE +P ++G+ ++ L + N+LE LP I +L+ L+ D+SQN++ P + A+ + N + P + +L L L D N++T L I N+ L +++N ++ LP I L L L++ N L+SIP +G L VL + N
Sbjct: 31 LVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPLTRLPEGFTQLKSLIYLSLNDVSLQGLPDDIGNLSNLVTLELRENLLKTLPTSLHLLVKLEQLDLGNNELETLPGSLGSLPNVRELWLDGNQLEALPSEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLK-HLSILKADQNRLTHLPEA-IGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDN 292 HSP 2 Score: 102.834 bits (255), Expect = 8.517e-23 Identity = 105/371 (28.30%), Postives = 181/371 (48.79%), Query Frame = 3
Query: 573 LNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIE---SEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRL----LELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEV 1655
L++L+++ L +N L+ LP + + L LD+S N+ + IPD+I L+ + S N L +LP+ +LK+LIY ++ + P D+ ++ L++ N++ P S L L++L + NN++ TL + +PN+ L + N + LP+EI +L+ LV LD+S N L +P A+G + L N + LK +++ +T P N E +E N + L +L +L+L + SIP E+ + V++L N+L + P G +S A I LDL+ NRL +EL+ +SLKAL L+ N + + + F T ++ + L+V
Sbjct: 5 LHNLRKLGLSDNELQRLPPDIANFMHLVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPLTRLPEGFTQLKSLIYLSLNDVSLQGLPDDIGNLSNLVTLELRENLLKTLPTSLHLLVKLEQLDLGNNELETLPG-SLGSLPNVRELWLDGNQLEALPSEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGK-----LKHLSILKADQNRLTHLPEAIGDCENLTELILTE--NQLVTLPASIGKLTKLTNLNLDKNRLNSIPP---EIGGCGALNVLSLRDNRLTQVP-GEISGASQIHVLDLAGNRLENLPIELAK-----LSLKALWLSENQSQPMLK-FQTEEDVRSGLKV 357 HSP 3 Score: 71.2478 bits (173), Expect = 5.553e-13 Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL 842
L LD+S N ++++ + I L+ L N+L+ +P+E+ L L L +N++T LPE+IG +L ++IL N L LP +L L L+L N + IP IG L LS+ N+L ++P I + D++ N++ P +L
Sbjct: 169 LVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLKHLSILKADQNRLTHLPEAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVPGEISGASQIHVLDLAGNRLENLPIEL 324 HSP 4 Score: 67.3958 bits (163), Expect = 9.262e-12 Identity = 47/159 (29.56%), Postives = 75/159 (47.17%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFE--VLKVNINMITLFPVSRLTPSLKELHIDNNQ 947
+ +PD I LA L S+N + LPE +G L HL + N L LP +L L L+ N+ +P +IG KL L++ N+L +P I AL + N++++ P ++ + + VL + N + P+ SLK L + NQ
Sbjct: 180 ERLPDAIGGLAALTDFLASQNHLEELPEELGKLKHLSILKADQNRLTHLPEAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVPGEISGASQIHVLDLAGNRLENLPIELAKLSLKALWLSENQ 338 HSP 5 Score: 64.3142 bits (155), Expect = 7.330e-11 Identity = 83/308 (26.95%), Postives = 128/308 (41.56%), Query Frame = 3
Query: 987 NINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSN-------MEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
N+ L +S N + LP +I + +LV LD+S N++ IP ++ L+V+ GNP T + G LK + N +DI + +L L + N + L H L LDL N + ++P + L ++ + L N+L P IG L +V LD+S NRL L D +L + N+L LPE +K+ L+ L+ N L LPE I + NL TEL L+ N++ +P G + NLD N++
Sbjct: 7 NLRKLGLSDNELQRLPPDIANFMHLVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPL-----TRLPEGFTQLKSLIYLSLNDVSLQGLPDDIGNLSNLVTLELRE------NLLKTLPTSLHLLVKLEQLDLGNNELETLPGS---LGSLPNVRELWLDGNQLEALPSEIGELR---RLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLKH-LSILKADQNRL-THLPEAIGDCENL------------------------TELILTENQLVTLPASIGKLTKLTNLNLDKNRL 271 HSP 6 Score: 62.3882 bits (150), Expect = 2.779e-10 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 3
Query: 1404 ELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLE-LPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
+ F+ ++ + L N+L P I + +V LD+S N + E+ D L+ ++ +GN L LPE FT +K+ + ++ N + L+ LP+ I NL NL L + + P + L L +LDL NNE+E +P G +++ LDGN++
Sbjct: 1 QFFRLHNLRKLGLSDNELQRLPPDIANF-MHLVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPLTRLPEGFTQLKSLIY---LSLNDVSLQGLPDDIGNLSNLVTLELRENLLKTL-PTSLHLLVKLEQLDLGNNELETLPGSLGSLPNVRELWLDGNQL 156
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: lrch3 (leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071004-44]) HSP 1 Score: 91.2781 bits (225), Expect = 3.497e-20 Identity = 72/209 (34.45%), Postives = 98/209 (46.89%), Query Frame = 3
Query: 597 LGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYL 1217
L N L +P E C +SLE L L +N IP+AI N L L+IS N+L LP +CKL L + S NK+ P++L L V+ N I P Q+ +L+ L L + +NN++ LP+EI DL LVQLDVS N L IP + + LQ L +D NP +S G + +YL
Sbjct: 5 LSKNRLNEVPLEVCHFVSLESLVLYHNCIRSIPEAIVNLRSLTYLNISRNQLTTLPPYLCKL-PLQVLNASNNKLVSLPEELGQLKELSALDVSCNEIQALP---------------PQVASLTCLR--------DLNVRRNNLVILPDEIADLP-LVQLDVSCNRLGEIPVSFRKLKQLQSLVLDNNPMKSPPAQICIKGKHHIFKYL 188 HSP 2 Score: 58.151 bits (139), Expect = 2.932e-9 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 3
Query: 1509 DLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFG 1838
DLS NRL E+ HFVSL++L L N +R++PE+ ++ +L L ++ N L LP + L L+ LNAS +V + P+ +LK L+ LD+S NEI+ +PP+
Sbjct: 4 DLSKNRLNEVPLEVCHFVSLESLVLYHNCIRSIPEAIVNLR-SLTYLNISRNQLT-TLPPYLCKL-PLQVLNASNNKLVSL-PEELGQLKELSALDVSCNEIQALPPQVA 109 HSP 3 Score: 55.4546 bits (132), Expect = 1.914e-8 Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL 842
T+P +C L L+ LN S NK+ LPE +G L L + + N ++ LP + L L L++ N +PD I + + L +L +S N+L ++P + KLK L + N + P +
Sbjct: 58 TLPPYLCKLP-LQVLNASNNKLVSLPEELGQLKELSALDVSCNEIQALPPQVASLTCLRDLNVRRNNLVILPDEIAD-LPLVQLDVSCNRLGEIPVSFRKLKQLQSLVLDNNPMKSPPAQI 176 HSP 4 Score: 54.299 bits (129), Expect = 4.268e-8 Identity = 56/194 (28.87%), Postives = 93/194 (47.94%), Query Frame = 3
Query: 1359 DLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYL 1940
DLS + +P E+ F ++ + L HN + P I++ S+ L++S N+L L L+ LN + N L +LPE +K L+ L+V+ N + LP + +L L+ LN +VI+ P L L+ +LD+S N + IP F + ++ LD N ++ P G +F+YL
Sbjct: 4 DLSKNRLNEVP---LEVCHFVSLESLVLYHNCIRSIPEAIVN-LRSLTYLNISRNQLTTLPPYLCKL-PLQVLNASNNKLVSLPEELGQLKE-LSALDVSCNEIQ-ALPPQVASLTCLRDLNVRRNNLVIL-PDEIADLPLV-QLDVSCNRLGEIPVSFRKLKQLQSLVLDNNPMKSPPAQICIKGKHHIFKYL 188
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011353.1 (pep scaffold:Pmarinus_7.0:GL480086:13034:13672:1 gene:ENSPMAG00000010326.1 transcript:ENSPMAT00000011353.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 83.5741 bits (205), Expect = 1.614e-18 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLK-LLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPK 836
+ +P E+ LA L ++LS N +T LP +G L L+ + L NN L +LP E C+L +L LD S+N +P AIG+ KL+ L + YN + +LP +C L L + N++ P+
Sbjct: 46 RELPSEVSLLANLERVSLSNNALTALPRGLGGLRKLRSVHLANNKLGPVLPAELCQLKALCFLDASDNCIERLPSAIGSMAKLETLLLLYNSIRELPDELCSLTTLRTLWLGSNRLRSLPR 166 HSP 2 Score: 81.2629 bits (199), Expect = 1.130e-17 Identity = 68/253 (26.88%), Postives = 105/253 (41.50%), Query Frame = 3
Query: 504 LAQLRYLNLSKNK-------ITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEK-LPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLC----VDGNPFRSINRTAITSGTEILKRYLRTR 1226
L++L L+LS + + LP + L++L+ + L N L+ LP+E L +LE + LSNN + +P +G KL+ + ++ NKL LP +C+LKAL + D S N I P + + L +L + Y N++ ELP+E+ L L L + N L S+P G + L+ VDGNP G E + RY R
Sbjct: 2 LSELEVLDLSPERESCIHYTLRSLPADVCRLHNLRVLCLDTNELRELPSEVSLLANLERVSLSNNALTALPRGLGGLRKLRSVHLANNKLGPVLPAELCQLKALCFLDASDNCIERLPSAI---------------------------------GSMAKLETLLLLY-----------NSIRELPDELCSLTTLRTLWLGSNRLRSLPRGFGELRGLRWGSSGADVDGNPMAEPPLDVCRRGVEAIGRYFALR 210
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Match: CYR1 (Adenylate cyclase; required for cAMP production and cAMP-dependent protein kinase signaling; the cAMP pathway controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation [Source:SGD;Acc:S000003542]) HSP 1 Score: 94.7449 bits (234), Expect = 2.883e-20 Identity = 133/470 (28.30%), Postives = 204/470 (43.40%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNI-------------NMITLFPV-SRLT------PSLKELHIDNNQIT---------------TLSSLHISYIPN--------INILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENY----FELFK-FKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELS-DVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIF-----NLVNLKYLNAS 1730
P I +L L L +N I +P SI L++L + L N L+ LP F L +L++LDLS+N+F H P+ I L ++ +SYNK++ LP++ L L ++S NK++ F DL ++ +N+ N+ LF +R++ P L+ L I N IT TL+ +S IP + L +++NN+ LP EI L LV L V+ N L IP L + +L+ L + N R G E L ++TS +I S A + S+ + H ++ L S + + + LF F +KV+NL +N + L SI L LS N+L LS D + SLK L LN N + +LP + + + L+ +V N L + + N LKYLN S
Sbjct: 855 FPSNITKAYKLVSLELQRNFIRKVPNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKFMHYPEVINYCTNLLQIDLSYNKIQSLPQSTKYLVKLAKMNLSHNKLN-FIGDLSEMTDLRTLNLRYNRISSIKTNASNLQNLFLTDNRISNFEDTLPKLRALEIQENPITSISFKDFYPKNMTSLTLNKAQLSSIPGELLTKLSFLEKLELNQNNLTRLPQEISKLTKLVFLSVARNKLEYIPPELSQLKSLRTLDLHSNNIRD-----FVDGMENL-----------ELTSL---------NISSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQFDDAMWPLFNCFVNLKVLNLSYNNFSDVSHMKLE---SITELYLSGNKLTTLSGDTVLKWSSLKTLMLNSNQMLSLPAELSNL-SQLSVFDVGANQLKYNISNYHYDWNWRNNKELKYLNFS 1294 HSP 2 Score: 57.7658 bits (138), Expect = 6.157e-9 Identity = 111/424 (26.18%), Postives = 192/424 (45.28%), Query Frame = 3
Query: 651 LEVLDLSNNEFSHIP-DAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTR--SNMEDITSFPSLAPLPI--NSIESEAGND-----ISVLHIDAHELNSTGS-----------LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYL--RTLPESF-------TTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEII 1823
+E LD+SNN +P + I + IKL L + + K P NI K L+ ++ +N I + P + ++ +L + N + P + +L+ L + +N+ + I+Y N+ + +S N + LP L L ++++S N L+ I L M L+ L + N SI T+ + + +L SN ED + P L L I N I S + D ++ L ++ +L+S L+L+ N+T +P+ E+ K K+ +++ NKL P LS S+ TLDL N + + D + + L +LN++ N +L SF + + +L A N + + VNLK LN SY + + M+L+ +TEL LS N++ +
Sbjct: 818 IESLDVSNNANIFLPLEFIESSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKVPNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKFMHYPEV-INYCTNLLQIDLSYNKIQSLPQSTKYLVKLAKMNLSHNKLNFIG-DLSEMTDLRTLNLRYNRISSIK----TNASNLQNLFLTDNRISNFED--TLPKLRALEIQENPITSISFKDFYPKNMTSLTLNKAQLSSIPGELLTKLSFLEKLELNQNNLTRLPQ---EISKLTKLVFLSVARNKLEYIPPE-LSQLKSLRTLDLHSNNIRDFVDGMEN-LELTSLNISSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQFDDAMWPLFNCFVNLKVLNLSYNNFSDV---SHMKLESITELYLSGNKLTTL 1225
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Match: SOG2 (Key component of the RAM signaling network; required for proper cell morphogenesis and cell separation after mitosis [Source:SGD;Acc:S000005880]) HSP 1 Score: 60.077 bits (144), Expect = 1.052e-9 Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 3
Query: 477 KTIPDEICDLAQ-LRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIK--LKRLSISYNKLEKLP--KNICKLKALIYFDVSQNKISEFPKD 839
K+I DE Q + L+L KN +T LP S L+ LQ + L NN K +P + LE+LDLS+NE +PD I +F + ++ LS+ N + + K+I KL L D+ NKI PK+
Sbjct: 55 KSISDEDVGYIQNVERLSLRKNHLTSLPASFKRLSRLQYLDLHNNNFKEIPYILTQCPQLEILDLSSNEIEALPDEISSFWQDNIRVLSLKDNNVTSIRNLKSITKLNKLSILDLEDNKI---PKE 177
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO48217 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKB1]) HSP 1 Score: 286.574 bits (732), Expect = 3.882e-87 Identity = 199/585 (34.02%), Postives = 309/585 (52.82%), Query Frame = 3
Query: 213 IIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDL--DASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMED-ITSFP--SLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
++ RK+G L L N G E+P ++ IN D EDR WW+ V LTKL L+SN + ++S D+ L L+ LD+ +N+L T+P+EI L+ L+ LNL NKI+ LP S+ L L + L +N K L L +LE LD+S N S +P G L+ L++S N LE LP L+AL ++S NKI FP L S L N +T P PSLKEL++ N+I L S + + +L + N + +P +II L+ L +LD++ N++ +PY +GNM L+ L ++GNP R + R + GT+ + ++L++R +D T P S+APLP S+ S +D H L T +L+ S + SIP E ++K V+ N L + P I + + S+ L+L FN++ L F L+ L+L N L +LP+ F +++ +L + +++N LP V++++ +L+ L A I +I+ +R+ +L LDL NN I +PPE G +K L GN R P ++ GT+ + EYLR +I
Sbjct: 27 VLKQGRKSGQLNLSNRGLTEVPEKVWRINLDVPEEAKSVSLDCEDR--WWDQVDLTKLILASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNLGHNKISSLPMSMAQLESLCSLKLEHNSFKSLECWLGSLRNLEELDVSYNMVSSLPSLAG-LKHLRTLNLSNNALEMLPPEFDHLQALDDLNISSNKICNFPGKLYNMKSLRRLDCRQNHLTSVPSVGQCPSLKELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAPLPSVSMGSSGA------VVDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNMLTDLPERITALSSSVSDLNLGFNKITSLPSGICSFTQLEFLDLRNNQLSSLPDGFASLR-SLREIIISYNRFSC-LPPVLYSMTSLRTLLACDNQIAVIDVDGLLRMSVLETLDLQNNNISQVPPELGNVRGLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRI 600
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO38039 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SE32]) HSP 1 Score: 114.39 bits (285), Expect = 4.013e-27 Identity = 132/479 (27.56%), Postives = 222/479 (46.35%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQI-ILGNNLLKL-----------------------LPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIE--LPNEI--IDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFS-IVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLN 1724
+T L L N ++++ +D+ L++L L L N L ++PD L L L+L++N + LPES+G L+ L+ + + GN L KL L F + +L+VL+L +N +P+ GN KL+ +++S N +EKLP++ L L FD++ N I P+ +++ L+ L+ DNN IT L +PNI L +S N + + LP+ I K L LD+S N + +P ++G + L+ L + G+ + R A +G + S++ D SF +A +++ LH+D ++ + +P+++ +L + + V G N++ P C S + L LS N L EL + F + SL L L+ N L +LP SF + N + TL++ N L E+P V+ L NL L+
Sbjct: 1 ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERFESAC--------------------FLEHLYADNNNITWLPDW-FGDLPNIINLCLSDNELSDSALPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHL-GSTINELERRAFQNGNWL--------SHLPD--SFSQMA-------------NLTKLHLDENQ-------------VVCLPDDFGDLVNLEWLDV---GQNRIEMLPDSF--CNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTN-VKTLDLYRNKLS-EIPRVLLKLENLMRLD 414 HSP 2 Score: 97.4413 bits (241), Expect = 1.393e-21 Identity = 123/471 (26.11%), Postives = 201/471 (42.68%), Query Frame = 3
Query: 522 LNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPI----GILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNL-------------NGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
L L N + LP+ +G+L L ++ L NLL LP F RL +L L L+ N +P+++G KL+ L+++ NKLEKL D A SL EL ID N ++ LS + + + N+ +L + N++ LP + +L+ L +++S NN+ +P + G LC LK + T +++E++ E+ + L+ D N NIT +P+ + +L I + L N+L + + G +S ++ +LDLS NR+ +L D LK L+L NGN+L LP+SF+ M N L L + N + + LP+ +LVNL++L+ I ++ P +F L L L LS N + +P FG + LD N++
Sbjct: 4 LKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRD-----------------------DFGAGL-------------------ASLTELRIDENDLSELS-VSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFG------FLCC-------------------LKSFDITGNHIENLPE------------RFESACFLEHLYAD-------------NNNITWLPDWFGDL---PNIINLCLSDNELSDSALPDHFGSISGK-TLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMAN-LTKLHLDENQV-VCLPDDFGDLVNLEWLDVGQNRIEML-PDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQL 374 HSP 3 Score: 68.9366 bits (167), Expect = 2.509e-12 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQN 815
+PD+ DL L +L++ +N+I +LP+S L+ L + L N L LP F L SL L L +N+ S +P + N +K L + NKL ++P+ + KL+ L+ D+ N
Sbjct: 308 LPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLENLMRLDLDGN 418 HSP 4 Score: 52.373 bits (124), Expect = 4.978e-7 Identity = 44/131 (33.59%), Postives = 61/131 (46.56%), Query Frame = 3
Query: 1497 IVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
I TL L FN L L D SL L L GN L +LP+ F + N L L + N L ELPE + L L+ LN + + + L LTEL + N++ + F L +++K+ L N I
Sbjct: 1 ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGN-LTELHLNENSLE-ELPESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELGDNHIER 129
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO35138 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMB5]) HSP 1 Score: 108.227 bits (269), Expect = 2.471e-26 Identity = 74/251 (29.48%), Postives = 134/251 (53.39%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQITTL----SSLH------------------ISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
+ P++I +L QL+ LNLS N IT P L L ++ L N+ L+ LP + C L+ LEVLDL+NN +P + G+ +L+ L++ N++ LP ++ + L Y ++ N++ FP+++ + VL +N N + P S +L L+ L++ +N++ L +S H IS + ++ +L +S N++ ELP+ I +L L +L + N + +P ++ ++ LQVL + N
Sbjct: 4 QYFPEQILELTQLQVLNLSGNHITNFPYRFFMLRFLTELYLRNDFLEFLPAQVCTLVQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQNNQITNLPSSLADMNGLCYLNLEANELKIFPEEVSQLSRLRVLHLNSNNLRALPESFKLLNHLRILYLKDNKLRVLPDWFASFHCLAYLSMENNDLVCFPGEISKLTSLEVLILSGNSIRELPDSIKELVNLKELFLGRNKIRKLPPSITKLEKLQVLYLQEN 254 HSP 2 Score: 65.855 bits (159), Expect = 6.089e-12 Identity = 67/209 (32.06%), Postives = 103/209 (49.28%), Query Frame = 3
Query: 369 VLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLF----PVSRLTPSLKELHIDNNQITTLSSLHISYI 983
V L LDL++N I+ + L+ L +L+LQNN + +P + D+ L YLNL N++ + PE + L+ L+ + L +N L+ LP F L L +L L +N+ +PD +F L LS+ N L P I KL +L +S N I E P + +K +N+ LF + +L PS IT L L + Y+
Sbjct: 60 VQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQNNQITNLPSSLADMNGLCYLNLEANELKIFPEEVSQLSRLRVLHLNSNNLRALPESFKLLNHLRILYLKDNKLRVLPDWFASFHCLAYLSMENNDLVCFPGEISKLTSLEVLILSGNSIRELP-------DSIKELVNLKELFLGRNKIRKLPPS----------ITKLEKLQVLYL 251 HSP 3 Score: 59.3066 bits (142), Expect = 1.210e-9 Identity = 73/289 (25.26%), Postives = 118/289 (40.83%), Query Frame = 3
Query: 612 LKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGI 1478
L+ P + L L+VL+LS N ++ P L L + + LE LP +C L L D++ N I P + LT L+ L++ NNQIT L S ++ + + L + N + P E+ L L L ++ NNL ++P + ++ L++L + N R + + SF LA L S ND+ + +L S L LS +I +P++ EL K++ LG NK+ + P I
Sbjct: 3 LQYFPEQILELTQLQVLNLSGNHITNFPYRFFMLRFLTELYLRNDFLEFLPAQVCTLVQLEVLDLANNFIRTLP-------------------YSSGHLT-RLRWLNLQNNQITNLPS-SLADMNGLCYLNLEANELKIFPEEVSQLSRLRVLHLNSNNLRALPESFKLLNHLRILYLKDNKLRVLP---------------------DWFASFHCLAYL------SMENNDLVCFPGEISKLTSLEVLILSGNSIRELPDSIKELVNLKELF---LGRNKIRKLPPSI 240 HSP 4 Score: 50.0618 bits (118), Expect = 1.201e-6 Identity = 53/223 (23.77%), Postives = 105/223 (47.09%), Query Frame = 3
Query: 969 HISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPS-LAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN 1634
I + + +L +S N++ P L++L +L + + L +P + + L+VL + N R++ +SG R+L ++N IT+ PS LA + + N++ + + +L+ L L++ N+ ++PE++ L ++++ L NKL P + + L + N L+ + SL+ L L+GN +R LP+S + N
Sbjct: 9 QILELTQLQVLNLSGNHITNFPYRFFMLRFLTELYLRNDFLEFLPAQVCTLVQLEVLDLANNFIRTL---PYSSGHLTRLRWLNLQNN--QITNLPSSLADMNGLCYLNLEANELKIFPEEVSQLSRLRVLHLNSNNLRALPESFKLL---NHLRILYLKDNKLRVLP-DWFASFHCLAYLSMENNDLVCFPGEISKLTSLEVLILSGNSIRELPDSIKELVN 222 HSP 5 Score: 49.2914 bits (116), Expect = 2.333e-6 Identity = 50/170 (29.41%), Postives = 79/170 (46.47%), Query Frame = 3
Query: 1377 ITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIR 1886
+ PE EL +++V+NL N + FP F + L L + L L V L+ L+L N++RTLP S + L L + +N + LP + ++ L YLN + I P+ +L L L L++N + +P F L H++I L NK+R
Sbjct: 3 LQYFPEQILEL---TQLQVLNLSGNHITNFPYRFFMLRF-LTELYLRNDFLEFLPAQVCTLVQLEVLDLANNFIRTLPYSSGHL-TRLRWLNLQNNQIT-NLPSSLADMNGLCYLNLEANELKIF-PEEVSQLSRLRVLHLNSNNLRALPESFKLLNHLRILYLKDNKLR 165
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO37499 (Leucine-rich repeat protein soc-2 homolog [Source:UniProtKB/Swiss-Prot;Acc:A7SFP1]) HSP 1 Score: 110.923 bits (276), Expect = 2.231e-25 Identity = 135/520 (25.96%), Postives = 225/520 (43.27%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPD-----------------------AIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNI--NMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEII-DLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINR-TAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLK--YLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+P E+ +L LR L L N+I VLP +G L +L+ + L N L LP +L L+VLDL +N+ IPD IGN L+RLS+ NK++ LP+ I +L L+ D+S N I P ++ + +++ N I P + RLT ++ L + NQ+++L ++ I+ I NN+ ELP +++ LK L L +S N P + C NR I G +YL ++ N++D N ++ L +D S L+++ I+ +PE+ L ++V+ L +N L + P GI + LD+ N+L + + SL+ L L N L +LP S + +++ L V N L + +P+ I N+ +L+ YLN N ++ +P E LC ++I +++ + V+ G +V +YLR Q
Sbjct: 101 LPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLT-AMTRLGLRYNQLSSLPD-SLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAG-----PPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYL-SKLNVKD--------------------NQLTSLPLDFGSWISLVELNVATNQISKLPEDIQWLV---NLEVLILSNNLLKKLPRGI-GALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYL-SSVTYLSVGENEL-VSVPQEIGNMESLEQLYLN-------------------------DNENLQSLPYELVLCGSLQIMSIENCPLSALPSQIVAGGPSLVIQYLRLQ 561 HSP 2 Score: 98.5969 bits (244), Expect = 1.891e-21 Identity = 118/421 (28.03%), Postives = 202/421 (47.98%), Query Frame = 3
Query: 369 VLLTKL---DLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFE---VLKVNINMITLFPVS----------------RL----------TPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDV---SFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRT------RSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLS-NRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIV 1502
V LTKL DL N IK++ + I L+ L L L+ N + + I +L L L+L +NKI +LP IG L HL + + +N ++ LP E + + LDL +N+ +PD+IG + RL + YN+L LP ++ + F++ N I+E P+ L +S + L ++ N +FP R+ L +L++ +NQ+T+L S+I + L ++ N + +LP D+++LV L+V S N L +P +G + L+VL ++ N SI TEI YLR+ +SN + S P S+ L + S N++ + + + S L L+ N N+ S+P +EL ++++++ + L P I++ S+V
Sbjct: 152 VKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVE-LNVATNQISKLPE---DIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESI-------PTEI--EYLRSLERLVLQSNC--LGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLP---YELVLCGSLQIMSIENCPLSALPSQIVAGGPSLV 554 HSP 3 Score: 73.559 bits (179), Expect = 1.255e-13 Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 3
Query: 480 TIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINM-ITLFPVSR-LTPSLKELHIDNNQITTLSSLHISYIPNINI 998
++P + L LN++ N+I+ LPE I L +L+ +IL NNLLK LP L L VLD+ N+ IP I L+RL + N L LP++I L ++ Y V +N++ P+++ S E L +N N + P L SL+ + I+N ++ L S ++ P++ I
Sbjct: 379 SLPLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQIVAGGPSLVI 555 HSP 4 Score: 69.3218 bits (168), Expect = 2.790e-12 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 3
Query: 345 DRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNK-LEKLPKNICKLKALIYFDVSQNKISEFPKDLDAS 851
D SW + L +L++++N I K+ EDI++L NL L L NN LK +P I L +LR L++ +NK+ +P I L L++++L +N L LP L S+ L + NE +P IGN L++L ++ N+ L+ LP + +L + +S P + A
Sbjct: 383 DFGSW---ISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQIVAG 549
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO46974 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNR2]) HSP 1 Score: 103.99 bits (258), Expect = 9.574e-24 Identity = 100/338 (29.59%), Postives = 166/338 (49.11%), Query Frame = 3
Query: 384 LDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLS-NRNITSIP 1391
LD S N I + E I+ NL +D N + IP+ C LA L +L L+ + LP + G L L+ + L N L++LP +L +LE LD+ NNEF+ +P +G + L L + N +++L I L+ L++ DVS+N++ P ++++ SL +L++ NN + + I + + L + +N++ ELPN I L L +L ++ N L S+P +LG + L+VL +D N SI + + S T + LR + P S+ +P + + A N + L H+L S +L LS N++ IP
Sbjct: 76 LDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIES--------------------LQSLTDLYLSNNLLIEIPE-QIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESI-PSELGSCTAMTILSLRDNR----LVHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQSKPMIP 387 HSP 2 Score: 89.3521 bits (220), Expect = 7.180e-19 Identity = 99/368 (26.90%), Postives = 165/368 (44.84%), Query Frame = 3
Query: 528 LSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESF 1619
L N++ LP + L +LQ + L +N L +LP+ L++L +LD S N IP+ I + L+ + S N + K+P+ C L L + ++ + P + S +L++ N + + P +S+L +L+ L I NN+ T L + + + N+ L + N + EL EI L+ L+ LDVS N L +P + ++ +L L + N I E I + L L + N + L +L L L+ + S+P + L +K++V+N+ N L P + SC ++ L L NRL+ L D L+ +NL N L LP SF
Sbjct: 32 LDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLK-NLERLDIGNNEFTELPMV-VGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIP---------------------EQIGALGKLQTLKLEE------NHLGELPNSIGKLVELEELILTCNELVSLPPS---LGYLRKLRVLNIDENFLESIPSELGSCT-AMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYSF 366 HSP 3 Score: 58.5362 bits (140), Expect = 4.690e-9 Identity = 55/200 (27.50%), Postives = 98/200 (49.00%), Query Frame = 3
Query: 1356 LDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLK--YLNASYCAIVIIN--------------------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
L+L + N+T++ + F+ + K ++ V L N+L + P G+ + ++ L LS N L L V ++ V+L+ L+ + N + +PE+ KN L ++ + NP+G ++PE +L NL YLN ++ + N PK+ +LK L LD+ NNE +P G ++ +D N I+
Sbjct: 4 LELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQ-NLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKN-LQEIDASVNPIG-KIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKE 200 HSP 4 Score: 58.151 bits (139), Expect = 6.657e-9 Identity = 79/326 (24.23%), Postives = 149/326 (45.71%), Query Frame = 3
Query: 900 SRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGN 1877
S+ +L+E+++D NQ+ L + + N+ +L +S N + LP+ + +L L LD S N + IP + + LQ + NP I T +L +++ +F P GN L S L+L ++ +P++ +L K ++ +++G+N+ E P+ ++ C ++ L + N + EL L L+++ N L LP +++ +L L +++N L +E+PE I L L+ L + + P + +L L EL L+ NE+ +PP G +++ N+D N
Sbjct: 21 SKEGKALEEVYLDANQLRDLPR-GLFNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFC---------HLANLTHLYLNDAFLDFLP----------GN--------FGRLISLRILELRENHLRVLPKSMSQL---KNLERLDIGNNEFTELPM-VVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQ-SLTDLYLSNN-LLIEIPEQIGALGKLQTLKLEENHLGEL-PNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDEN 311 HSP 5 Score: 48.1358 bits (113), Expect = 9.100e-6 Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 3
Query: 216 IDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNE 680
I+ + L L N EIP I + + ++ E E NS + V L +L L+ N + + + +L L L++ N L++IP E+ + L+L N++ LP+SIG + LQ I L +N L+ LP F +L+SL+ L LS N+
Sbjct: 228 IESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKL-EENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQ 381
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:101158008]) HSP 1 Score: 297.745 bits (761), Expect = 6.842e-91 Identity = 197/590 (33.39%), Postives = 315/590 (53.39%), Query Frame = 3
Query: 195 KVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSF--PSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQI 1952
+VP ++ ARK+G L L ++P +Y +N ++ + F + DR WWE LTKL LSSN I ++SEDIR L L+ LDL +N L T+ I +L +L+ L LS N+++ LP + L +L+ + L NLL+ LP EF +L +L LDLS N + +P ++G L+++S+S+NKL LP + +L + D S N++S+ P L S E L + N + P P+LKEL++ NNQ+ L + + + I++L + N + +P ++ L L +LD++ N++ S+P +L + L+VL V+GNP R I R +T GT L +YLR R E +S P+ P S I+ H + + G LD S+ + SIP+ F + + + N NKL P +L + S+ L+L FN+L + L L+L N L+ LP + L + +++N PEV++ + +++ + + + ++P RL+ L+ LDLSNN++ IPPE GLC ++ +L GN R P V+ GT+ V EYLRS+I
Sbjct: 25 EVPA-GLLKAARKSGQLNLSGRALTKVPQSVYRVNEEAQQNVS---FGASDR--WWEQTDLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLH-APALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFP------------SQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAK-LRCIILSYNRFK-SFPEVLYQMFSMETVLMANNQVSSVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRI 593 HSP 2 Score: 82.4185 bits (202), Expect = 7.639e-16 Identity = 86/324 (26.54%), Postives = 152/324 (46.91%), Query Frame = 3
Query: 987 NINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI-LKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQ 1955
++ L +S N + ++ +I L LV LD+ N L+++ A+G + LQ L + N S+ E+ + R LR+ + +++ + ++ E G +L + LDLS +T +P++ L +KI +L HNKL P LS ++ LD S N+L ++ H +SL+ L+L N L+ LP+ L L V +N +G+ E + L + L I + P+ L LT LDL+NN+I +P L ++K+ ++GN +R ++ GT + +YLR +++
Sbjct: 78 DLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL-------PVEVCMLRNLRSLTLQQNL----------LENLPEEFG-----------QLENLTELDLSKNRLTDLPQSLGRLTGLQKI---SLSHNKLSCLP-DCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAP---ALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAV-PEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVK 365
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc1 (leucine rich repeat containing 1 [Source:NCBI gene;Acc:101169728]) HSP 1 Score: 105.145 bits (261), Expect = 2.141e-23 Identity = 76/244 (31.15%), Postives = 122/244 (50.00%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEI 1202
+P DL L L+++ + LP+ G L++L + L N+L LP L LE LDL +NE +P +IGN LK L + N+L +LP +C+++ L+ DVS+NK+ P++L + L V+ N I P + +L L L +D N++ L I ++ L +++N + LP I LK L L+ N L S+P +G +L V C+ N I ++ TE+
Sbjct: 70 LPATFPDLQSLVCLSINDISLQRLPDDFGNLSNLVSLELRENILTFLPDSLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQ-KLSILKVDQNRLNCLPE-SIGSCESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRI-PAELSQATEL 310 HSP 2 Score: 102.834 bits (255), Expect = 1.088e-22 Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSLKE---LHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYAL 1112
+PD + +L +L L+L N++ LP+SIG L++L+++ L N L LP CR+ +L LD+S N+ +P +G L L +S N +E LP++I KL+ L V QN+++ P+ + + S L + N I P R LK+ L+ D NQ+T+L I ++N+ + N + +P E+ L LDVS N L +P +L
Sbjct: 116 LPDSLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIGSCESLAELILTENQIKSLP--RSIGKLKKLFNLNCDRNQLTSLPK-EIGGCCSLNVFCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSL 327 HSP 3 Score: 89.7373 bits (221), Expect = 2.329e-18 Identity = 96/360 (26.67%), Postives = 147/360 (40.83%), Query Frame = 3
Query: 552 LPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMK 1631
+PESI LQ N L LP F L SL L +++ +PD GN L L + N L LP ++ +L L D+ N++ E PK + N++ +LKEL +D NQ+ L + + I N+ L +S+N + LP E+ L+ L L VS N++ ++P ++G + L +L VD N + P I S ES A L L+ I S+P + + K KK+ +N N+L P I C S+ + NRL + + L L+++GN L LP S TT++
Sbjct: 47 IPESISHCKALQVADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPDDFGNLSNLVSLELRENILTFLPDSLSELHKLEGLDLGSNELEELPKSIG--------NLS------------NLKELWLDGNQLVELPA-TLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCL--------------------------------PESIGSCESLA------------------ELILTENQIKSLPRS---IGKLKKLFNLNCDRNQLTSLPKEIGGCC-SLNVFCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSLTTLQ 331 HSP 4 Score: 69.707 bits (169), Expect = 4.876e-12 Identity = 74/265 (27.92%), Postives = 119/265 (44.91%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFE--VLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIE---LPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
L LD+S N ++ + +++ L NL L + N+++ +P+ I L +L L + +N++ LPESIG+ L ++I L+ N+ +P +IG KL L+ N+L LPK I +L F + N+++ P +L + E VL V+ N + P+S T LK L + NQ L S P SK V+ LP + + +Y L F+ L S+ G +D VD N
Sbjct: 172 LVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIGSCESLAELI-----------------------LTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSLTTLQLKALWLSENQSQPLLSFQTEEDPE------SKEKVLTCVLLPQQPCESEYKDNL-ARFDGLDSLVN--GMVDDTWANAVDAN 404 HSP 5 Score: 56.9954 bits (136), Expect = 5.080e-8 Identity = 83/305 (27.21%), Postives = 133/305 (43.61%), Query Frame = 3
Query: 1086 NLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHI--DAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILS-------------------CAF-SIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI-RHPALTSVSHGTEV 1925
+++ IP ++ + LQV GNP + T FP L L SI NDIS+ + D L++ SL+L +T +P++ EL K + + +LG N+L E P IG LS C ++V LD+S N+L L +L L ++ N + LPES ++ L+ L+V N L LPE I + +L L + I + P++ +LK L L+ N++ +P E G C + + + N++ R PA +S TE+
Sbjct: 43 DVYEIPESISHCKALQVADFSGNPLTRLPAT------------------------FPDLQSLVCLSI-----NDISLQRLPDDFGNLSNLVSLELRENILTFLPDSLSELHKLEGL---DLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQK-LSILKVDQNRLNC-LPESIGSCESLAELILTENQIKSL-PRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPA--ELSQATEL 310
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:101159973]) HSP 1 Score: 105.916 bits (263), Expect = 2.679e-23 Identity = 123/432 (28.47%), Postives = 200/432 (46.30%), Query Frame = 3
Query: 636 CRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFP--VSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTA--ITSGTEILKRYLRTRSNMEDITSFP-SLAPLPINSIESEAGNDISVLHIDAHELNSTGSL-DLSNRNITSIPENYFELF------KFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
CR + LDLS +P +I +L L + NKL+ LP + L L+ +S+N ++ P LD+ +L + N + P V RLT SL L++ N+ITT+ I + + +L+I +N + +LP EI +L L+ LDV+ N L +P +GN + L + N + T + S + RY R +++ P SLA + N+ISVL G L L N ++ N F+ + +F I +N+ HN + + P GI S A + L++ N+L L F + S+ LNL N L +PE + +L L +++N L +LP I NL L+ L+ + + P LK L +L L+NN++ +P G ++ L N ++H
Sbjct: 97 CREENSMRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLT-SLTTLYLRFNRITTVEK-DIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNR-------LSAIPRSLAKCRELEELNLENNNISVL--------PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLV-SLEVLILSNNLLK-KLPHGIGNLRKLRELDLEENKLECL-PNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQH 508 HSP 2 Score: 99.7525 bits (247), Expect = 2.376e-21 Identity = 138/536 (25.75%), Postives = 236/536 (44.03%), Query Frame = 3
Query: 381 KLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNST-----------GSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAF-SIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNN-EIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQ 1949
+LDLS I + I+ L+ L L L +N L+++P E+ L+ L L LS+N +T LP+S+ +L L+ + L +N L+ +P RL SL L L N + + I N KL LSI NK+++LP I +L LI DV+ N++ PK++ + QIT L H N +++LP I +L + +L + +N L +IP +L L+ L ++ N + ++S + L S+P P ++I S L+++ + +N L++ + +TS+P + + + +NL N+L + P + C S+ L LS N L +L + L+ L+L N L LP +K+ L L + +N L LP I +L NL +L + + P+ L+ L EL L++N + +P E LC + I +++ + H V+ G + ++L+ Q
Sbjct: 104 RLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG------------------------------NCTQITNLDLQH--------------NELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNC----FQSYPVGGPSQFSTIYS--------LNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLP---LDFGTWTSMVELNLATNQLAKIPEDV--CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKD-LQKLVLTNNQL-TTLPRGIGHLTNLTHLGLGENLLQHL-PEEIGTLENLEELYLNDNPNLHSLPFELALCSKLAIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQ 575 HSP 3 Score: 83.9593 bits (206), Expect = 2.229e-16 Identity = 76/274 (27.74%), Postives = 142/274 (51.82%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITL-------FPVSRLT--PSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L LDL N ++++ + L++L L L+ N + T+ +I +L++L L++ +NKI LP IG L +L + + +N L+ LP E + LDL +NE +P+ IGN + RL + YN+L +P+++ K + L ++ N IS P+ L +S VN+ +TL +PV + ++ L++++N I + S ++ L + N + LP + +V+L+++ N L IP + + +L+VL + N + +
Sbjct: 171 LRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSL----VNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKL 440
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc7 (leucine rich repeat containing 7 [Source:NCBI gene;Acc:101170832]) HSP 1 Score: 101.293 bits (251), Expect = 1.825e-21 Identity = 85/287 (29.62%), Postives = 140/287 (48.78%), Query Frame = 3
Query: 369 VLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQIT----TLSSLH------------------ISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
V L +LD+S N I++ ++I+ L ++ N + +PD L L L L+ + LP + G L+ L+ + L N LK +P RL LE LDL +NEFS +P+ + LK L + N L+ +P +I KL+ L Y D+++N+I D+ + E L ++ NM+ P S + L L +D+NQ+T T+ SL I Y+ ++ +N + ELP EI + + + + + N L +P +G M L+VL + N
Sbjct: 105 VNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 391 HSP 2 Score: 86.6557 bits (213), Expect = 5.398e-17 Identity = 101/384 (26.30%), Postives = 160/384 (41.67%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN 1634
+P I L L+ L++SKN I P++I L + N + LP F +LL+L L L++ ++P G KL+ L + N L+ +PK+I +L L D+ N+ SE P EVL+ N LKEL +DNN + T+ I + + L ++KN + L +++ + L L +S N L +P ++G + L L VD N +TS P ++I S +S+L D S + S+P L + N L E P I +C ++ + L N+L L D L+ LNL+ N L+ LP +FT +K+
Sbjct: 97 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVP-------EVLEQIHN-------------LKELWLDNNSLQTIPG-SIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDN----------------------------QLTSLP-------HTIGS-----LSLLE----------EFDCSCNELESLPPTIGYLHSLRTFAA---DENFLTELPREIGNCR-NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKD 405 HSP 3 Score: 83.9593 bits (206), Expect = 3.781e-16 Identity = 73/265 (27.55%), Postives = 121/265 (45.66%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L +LDL SN +V E + + NL L L NN+L+TIP I L QLRYL+L+KN+I L + L+ ++L +N+L+ LP L L L + +N+ + +P IG+ L+ S N+LE LP I L +L F +N ++E P++ I N+ ++++ N + LP+EI + L L++S N L ++P+ + L L + N +++
Sbjct: 199 LERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPRE--------------------------------------------IGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 419 HSP 4 Score: 61.6178 bits (148), Expect = 2.845e-9 Identity = 102/422 (24.17%), Postives = 166/422 (39.34%), Query Frame = 3
Query: 636 CRLLSLE-----VLDLSNNEFSHIPDAIGNFIK-LKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
CR E VLD S+ +P I +F + L+ L + N++E+LPK + +AL + N +S P + AS VN LKEL I N I +I ++++ S N + +LP+ L L QL ++ L +P G + L++L E+ + +L+T + H L LDL + + +PE ++ K++ + N N L P G + + LDL+ NR+ L + +L+ L L+ N L+ LP+S +K L TL+V N L LP I +L L+ + S C + P L L N + +P E G C ++ + +L NK+
Sbjct: 27 CRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTI-ASL----VN---------------LKELDISKNGIQEFPD-NIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRIL-------------------ELRENHLKT-------------------------------MPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDN---NSLQTIP-GSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKK-LTTLKVDDNQL-TSLPHTIGSLSLLEEFDCS-CNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKL 370 HSP 5 Score: 53.1434 bits (126), Expect = 1.156e-6 Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 3
Query: 1302 NDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
ND+S L L + LD+S I P+N + K + VV N + + P G ++ L L+ L L F L+ L L N+L+T+P+S + L L++ N E+PEV+ + NLK L ++ I P + +L+ L LDL+ N IE + + CE ++ L N ++H
Sbjct: 92 NDLSNLPTTIASLVNLKELDISKNGIQEFPDN---IKCCKGLSVVEASVNPITKLPDGFTQL-LNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRL-TQLERLDLGSNEFS-EVPEVLEQIHNLKELWLDNNSLQTI-PGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQH 280
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc7 (leucine rich repeat containing 7 [Source:NCBI gene;Acc:101170832]) HSP 1 Score: 101.293 bits (251), Expect = 1.961e-21 Identity = 85/287 (29.62%), Postives = 140/287 (48.78%), Query Frame = 3
Query: 369 VLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVS-RLTPSLKELHIDNNQIT----TLSSLH------------------ISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGN 1154
V L +LD+S N I++ ++I+ L ++ N + +PD L L L L+ + LP + G L+ L+ + L N LK +P RL LE LDL +NEFS +P+ + LK L + N L+ +P +I KL+ L Y D+++N+I D+ + E L ++ NM+ P S + L L +D+NQ+T T+ SL I Y+ ++ +N + ELP EI + + + + + N L +P +G M L+VL + N
Sbjct: 105 VNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 391 HSP 2 Score: 86.6557 bits (213), Expect = 6.014e-17 Identity = 101/384 (26.30%), Postives = 160/384 (41.67%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKN 1634
+P I L L+ L++SKN I P++I L + N + LP F +LL+L L L++ ++P G KL+ L + N L+ +PK+I +L L D+ N+ SE P EVL+ N LKEL +DNN + T+ I + + L ++KN + L +++ + L L +S N L +P ++G + L L VD N +TS P ++I S +S+L D S + S+P L + N L E P I +C ++ + L N+L L D L+ LNL+ N L+ LP +FT +K+
Sbjct: 97 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVP-------EVLEQIHN-------------LKELWLDNNSLQTIPG-SIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDN----------------------------QLTSLP-------HTIGS-----LSLLE----------EFDCSCNELESLPPTIGYLHSLRTFAA---DENFLTELPREIGNCR-NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKD 405 HSP 3 Score: 83.9593 bits (206), Expect = 3.971e-16 Identity = 73/265 (27.55%), Postives = 121/265 (45.66%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L +LDL SN +V E + + NL L L NN+L+TIP I L QLRYL+L+KN+I L + L+ ++L +N+L+ LP L L L + +N+ + +P IG+ L+ S N+LE LP I L +L F +N ++E P++ I N+ ++++ N + LP+EI + L L++S N L ++P+ + L L + N +++
Sbjct: 199 LERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPRE--------------------------------------------IGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 419 HSP 4 Score: 61.2326 bits (147), Expect = 3.969e-9 Identity = 102/422 (24.17%), Postives = 166/422 (39.34%), Query Frame = 3
Query: 636 CRLLSLE-----VLDLSNNEFSHIPDAIGNFIK-LKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKI 1883
CR E VLD S+ +P I +F + L+ L + N++E+LPK + +AL + N +S P + AS VN LKEL I N I +I ++++ S N + +LP+ L L QL ++ L +P G + L++L E+ + +L+T + H L LDL + + +PE ++ K++ + N N L P G + + LDL+ NR+ L + +L+ L L+ N L+ LP+S +K L TL+V N L LP I +L L+ + S C + P L L N + +P E G C ++ + +L NK+
Sbjct: 27 CRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTI-ASL----VN---------------LKELDISKNGIQEFPD-NIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRIL-------------------ELRENHLKT-------------------------------MPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDN---NSLQTIP-GSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKK-LTTLKVDDNQL-TSLPHTIGSLSLLEEFDCS-CNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKL 370 HSP 5 Score: 53.1434 bits (126), Expect = 1.169e-6 Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 3
Query: 1302 NDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
ND+S L L + LD+S I P+N + K + VV N + + P G ++ L L+ L L F L+ L L N+L+T+P+S + L L++ N E+PEV+ + NLK L ++ I P + +L+ L LDL+ N IE + + CE ++ L N ++H
Sbjct: 92 NDLSNLPTTIASLVNLKELDISKNGIQEFPDN---IKCCKGLSVVEASVNPITKLPDGFTQL-LNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRL-TQLERLDLGSNEFS-EVPEVLEQIHNLKELWLDNNSLQTI-PGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQH 280
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000004186.1 (SMESG000004186.1) HSP 1 Score: 1221.07 bits (3158), Expect = 0.000e+0 Identity = 627/627 (100.00%), Postives = 627/627 (100.00%), Query Frame = 3
Query: 84 MAYNRHFIHKRKSLRINQINSSARISPPNNEQVSFAFKVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL 1964
MAYNRHFIHKRKSLRINQINSSARISPPNNEQVSFAFKVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFLSNLLYLDLQNNNLKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL
Sbjct: 1 MAYNRHFIHKRKSLRINQINSSARISPPNNEQVSFAFKVPGKNIIDDARKTGTLTLINFGFDEIPTDIYNINRPDKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFLSNLLYLDLQNNNLKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL 627
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000063073.1 (SMESG000063073.1) HSP 1 Score: 356.295 bits (913), Expect = 3.405e-113 Identity = 225/590 (38.14%), Postives = 346/590 (58.64%), Query Frame = 3
Query: 207 KNIIDDARKTGTLTLINFGFDEIPTDIYNINRP---DKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNM-EDITSF-PSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 1961
+N++ A+K+G+L L N EIP +Y IN P D++ I +E DS SWW+DV LTKL L++N I +S+DI L L +LD+ +NN+ ++PD I +L QL+Y N++KNKI LP+ I LQ + N LK LP RL +L ++DLS+NE S P I L +L +SYN++ +P + +L L D+SQNK+ F + A + +++N +T FP+ +LKE+ + +N I+ ++ H+S IPNI LTI+ N + ++P EI L L LD+S N++ ++P +LG+M+ L+ L +DGNPFR + R+ I SG + +KRYLR R+ E+ SF P L L +I+ ++G ID +L +TG + LS RN+ + + +K +NL NK FP+ I + S+ LDLS N++ EL + + L+ L+++ N +R LPES + M + L+ +++N +G +P+V+ + L+ L S+C + II+ + L L L++SNN I IPPE GLCE IK NLDGN + P +S GT V EYLRS+I +N
Sbjct: 37 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDS----SWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNRLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLLTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTSLSNLDLSNNDMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRAAIKDDSG------FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEM-SCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLNISNNAISNIPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVTN 615
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000016748.1 (SMESG000016748.1) HSP 1 Score: 122.865 bits (307), Expect = 1.421e-28 Identity = 141/497 (28.37%), Postives = 229/497 (46.08%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLD--ASFEVLKVNINMITLFPVSRLT-PSLKELHIDNNQ-----ITTLSSL--------HISYIPN-------INILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAG-NDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANL-----DGNKIR 1886
+P EI + +NLSKNKI+ L + I L+ L+ + N+L+ + L+ LD+SNN+ IP I N L+ + S+NKL+ LP I L L Y ++S N+I + P+++ S + +N N I L P S T SLK + NNQ I+ + SL +IP+ + L+++KN + +P E++ L+ L QLD+SFN++ IP +G L + GN ++ I + +++ + + FP L + +E G N+++ L + L ++N N IP ++ + ++ HN L + P GI S + L+LSFN +L L LN++ N + + +S + M L L+++ N L P IF L LKYLN S + + K + + L +D SNN+ P E LC H I L +G KI+
Sbjct: 44 VPKEIYFHPDVELINLSKNKISDLSDEIIALSKLRHFFVNGNMLRTINVNLFYARGLQSLDVSNNKLEVIPVEIANLGHLEYFNCSHNKLKALPLTIFGLLKLQYMNLSHNQIQDIPEEIGNLKSLQTFLINSNEIVLIPSSISTITSLKTIEASNNQMCHLPISWVGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFIPIELVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITYFPQSLIAN-----HKFVCLNISGCQLKEFPLLLCNCYDLMELRVGENELNELPDKFQLFCNMKYLFMNNNNFELIP---LQVCLLSTLVELDFSHNFLWQVPPGIFSLK-HLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISEICDSISWM-TFLYYLDLSFNELS-TFPSAIFQLRYLKYLNLSNNLLDNFS-KTDKKWEELRTIDFSNNKFTEFPVE--LCVHDSIRKLVFDQKEGTKIK 526 HSP 2 Score: 92.0485 bits (227), Expect = 6.920e-19 Identity = 131/511 (25.64%), Postives = 227/511 (44.42%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIP-DAIG--------------------------------NFIK-----------LKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITL--FPV------------------------SRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPS----LAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELP 1685
L LD+S+N ++ + +I L +L Y + +N LK +P I L +L+Y+NLS N+I +PE IG L LQ ++ +N + L+P+ + SL+ ++ SNN+ H+P +G N++K L++L +S+N +E +P + L+ F++ N I+ FP+ L A+ + + +NI+ L FP+ +L ++K L ++NN L L + + + L S N + ++P I LK+L +L++SFNN+ P + L L V N I +I+ T + YL N ++++FPS L L ++ + ++ S EL ++D SN T P +K+ K+ P+ I + + + L+LS N L + V +LK L + N L+ LP + + KN L ++V +N L ELP
Sbjct: 100 LQSLDVSNNKLEVIPVEIANLGHLEYFNCSHNKLKALPLTIFGLLKLQYMNLSHNQIQDIPEEIGNLKSLQTFLINSNEIVLIPSSISTITSLKTIEASNNQMCHLPISWVGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFIPIELVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITYFPQSLIANHKFVCLNISGCQLKEFPLLLCNCYDLMELRVGENELNELPDKFQLFCNMKYLFMNNNNF-ELIPLQVCLLSTLVELDFSHNFLWQVPPGIFSLKHLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISEIC-DSISWMTFL--YYLDLSFN--ELSTFPSAIFQLRYLKYLNLSNNLLDNFSKTDKKWEELR---TIDFSNNKFTEFPVELCVHDSIRKLVFDQKEGTKIKSLPVEIKN-LWRLAELNLSNNEFLTIPPVIMELENLKVLEMANNILKELPLNLSDAKN-LENIDVRNNQLT-ELP 598 HSP 3 Score: 80.4925 bits (197), Expect = 2.418e-15 Identity = 78/284 (27.46%), Postives = 129/284 (45.42%), Query Frame = 3
Query: 483 IPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIY-----------------------FDVSQNKISEFPKDLDASFEVLKVNINM-----ITLFPVS-RLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSG-TEILKRYLRTRSNMEDI 1244
IP ++C L+ L L+ S N + +P I +L HL+++ L N + + P L L L++S+N+ S I D+I L L +S+N+L P I +L+ L Y D S NK +EFP +L + K+ + I PV + L EL++ NN+ T+ + I + N+ +L ++ N + ELP + D K L +DV N L +P++L + DG+P + G E ++ +LR ED+
Sbjct: 364 IPLQVCLLSTLVELDFSHNFLWQVPPGIFSLKHLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISEICDSISWMTFLYYLDLSFNELSTFPSAIFQLRYLKYLNLSNNLLDNFSKTDKKWEELRTIDFSNNKFTEFPVELCVHDSIRKLVFDQKEGTKIKSLPVEIKNLWRLAELNLSNNEFLTIPPV-IMELENLKVLEMANNILKELPLNLSDAKNLENIDVRNNQLTELPFSLTTLSNKIKFKFDGSPLVNPPLIVCIGGNMESIQSFLRHNQAFEDV 646 HSP 4 Score: 63.1586 bits (152), Expect = 6.197e-10 Identity = 57/217 (26.27%), Postives = 102/217 (47.00%), Query Frame = 3
Query: 1299 GNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLG------------LEL--------PEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRH 1889
GN + ++++ SLD+SN + IP E+ ++ N HNKL P+ I + ++LS N++ ++ + + SL+ +N N + +P S +T+ +L T+E ++N + L+L P I++ +KYL+ + + I P ++L+ L +LDLS N IE IP E G + N+ GN I +
Sbjct: 84 GNMLRTINVNLFYARGLQSLDVSNNKLEVIP---VEIANLGHLEYFNCSHNKLKALPLTIFG-LLKLQYMNLSHNQIQDIPEEIGNLKSLQTFLINSNEIVLIPSSISTI-TSLKTIEASNNQMCHLPISWVGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFI-PIELVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITY 294
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000013154.1 (SMESG000013154.1) HSP 1 Score: 117.857 bits (294), Expect = 2.340e-27 Identity = 89/268 (33.21%), Postives = 145/268 (54.10%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKE---LHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L +LD+S NHI V +I+F + L LDL NN + +P+ L L LNL+ N +T LP G L+ LQ++ L +N LK LP F + + LE+LDL NEF P ++ L+ LS+ N+L+ LP+ + LK L DVS+N + +++ ++ ++ +L + +LKE L +D N++ +L++ HI + L +++N + +LP + L LV L+V NNL+SIP L + L ++ N R +
Sbjct: 85 LVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSLAKLSALRELSLDNNELQNLPQELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLTT-HIGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKCNELSIMSFRDNHIRRL 351 HSP 2 Score: 106.686 bits (265), Expect = 7.916e-24 Identity = 98/367 (26.70%), Postives = 174/367 (47.41%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHL-----------------------QQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTL 1508
K +P L++LR L LS N++T +PESIG NHL + + L NN + LP F L +L VL+L++N + +P+ GN L++L + N L+ LP + K L D+ N+ EFPK L ++L+ +L+EL +DNN++ L + + N+ L +S+N + + EI +L+ L +S N+L S+P +GN+ L +L VD N S+ T I S +++ + YL + S L+ L +++ N+++ + + + N + + +I +P+ E+ KK+ V+++ N++ P+ I C + L
Sbjct: 50 KDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSL-------------------AKLS-ALRELSLDNNELQNLPQ-ELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLT-THIGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDR---NNLNSIPPELSKCNELSIMSFRDNHIRRLPD---EIGNMKKLHVLDISINQIDRLPLSIAQCPLKALWL 388 HSP 3 Score: 85.5001 bits (210), Expect = 5.255e-17 Identity = 112/450 (24.89%), Postives = 186/450 (41.33%), Query Frame = 3
Query: 507 AQLRYLNLSKNKITVLP-ESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSL-KELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLC 1844
+QL ++ + + +P E I +++ L N +K LP F +L L VL LS+NE ++IP++IGNF L L +S N ++ + NI L D+S N I+ P+ + + VL +N N +T P SL ++L + +N + TL + ++ ++ IL + N E P + L L +L + N L ++P LG + LQ L V N L+ N+E +T F LS ++ S+P N L K++ ++ + NKL+ I SC+ + L L+ N L +L L LN++ N L ++P + N L+ + N + LP+ I N+ K L LD+S N+I+ +P C
Sbjct: 13 SQLEVIDKRHSNLLYVPDEVIRNARSIEECFLDANQIKDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFV-HLEILDLGGNEFQEFPKSLAKLSALRELSLDNNELQNLPQELGTLKNLQQLDVSEN---------------FLEVICEEIGNLEQLTDFA-----------------------------------LSQNSLDSLPNNIGNL---KELTILKVDQNKLMSLTTHIGSCS-KLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKC-NELSIMSFRDNHIR-RLPDEIGNM------------------------KKLHVLDISINQIDRLPLSIAQC 381 HSP 4 Score: 55.8398 bits (133), Expect = 8.302e-8 Identity = 66/231 (28.57%), Postives = 100/231 (43.29%), Query Frame = 3
Query: 1236 EDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIIN----------------------PKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIK 1856
E I +F L L + + N I +H + N SLDLSN I +PE + L + + V+NL N L E P G LS + L+L N L L + F+ FV L+ L+L GN + P+S + + L L + +N L LP+ + L NL+ L+ S + +I P N LK LT L + N++ + G C ++
Sbjct: 77 ESIGNFNHLVELDV------SRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSL---RNLIVLNLNDNSLTELPNDFGNLSL---LQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSLAKL-SALRELSLDNNELQ-NLPQELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLTTHIGSCSKLQ 293 HSP 5 Score: 52.373 bits (124), Expect = 1.119e-6 Identity = 57/189 (30.16%), Postives = 88/189 (46.56%), Query Frame = 3
Query: 1377 ITSIPENYFELFKFKKIKVVNLGHNKLVEFP--IG--------------ILSCAFSIV------TLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGN 1877
I +P+N+F K K++V+ L N+L P IG I S ++I +LDLS N + L + F+ +L LNLN N L LP F + + L LE+ N L LP V+L+ L+ PK+ +L L EL L NNE++ +P E G ++++ ++ N
Sbjct: 49 IKDLPKNFF---KLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNL-SLLQKLELRDNCLKT-LPNSFSKFVHLEILDLGGNEFQEF-PKSLAKLSALRELSLDNNELQNLPQELGTLKNLQQLDVSEN 231
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000013154.1 (SMESG000013154.1) HSP 1 Score: 117.472 bits (293), Expect = 2.659e-27 Identity = 89/268 (33.21%), Postives = 145/268 (54.10%), Query Frame = 3
Query: 375 LTKLDLSSNHIKKVSEDIRFXXXXXXXXXXXXXXKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKE---LHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSI 1169
L +LD+S NHI V +I+F + L LDL NN + +P+ L L LNL+ N +T LP G L+ LQ++ L +N LK LP F + + LE+LDL NEF P ++ L+ LS+ N+L+ LP+ + LK L DVS+N + +++ ++ ++ +L + +LKE L +D N++ +L++ HI + L +++N + +LP + L LV L+V NNL+SIP L + L ++ N R +
Sbjct: 85 LVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSLAKLSALRELSLDNNELQNLPQELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLTT-HIGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKCNELSIMSFRDNHIRRL 351 HSP 2 Score: 106.686 bits (265), Expect = 8.605e-24 Identity = 98/367 (26.70%), Postives = 174/367 (47.41%), Query Frame = 3
Query: 477 KTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHL-----------------------QQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTL 1508
K +P L++LR L LS N++T +PESIG NHL + + L NN + LP F L +L VL+L++N + +P+ GN L++L + N L+ LP + K L D+ N+ EFPK L ++L+ +L+EL +DNN++ L + + N+ L +S+N + + EI +L+ L +S N+L S+P +GN+ L +L VD N S+ T I S +++ + YL + S L+ L +++ N+++ + + + N + + +I +P+ E+ KK+ V+++ N++ P+ I C + L
Sbjct: 50 KDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSL-------------------AKLS-ALRELSLDNNELQNLPQ-ELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLT-THIGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDR---NNLNSIPPELSKCNELSIMSFRDNHIRRLPD---EIGNMKKLHVLDISINQIDRLPLSIAQCPLKALWL 388 HSP 3 Score: 86.6557 bits (213), Expect = 2.321e-17 Identity = 129/540 (23.89%), Postives = 219/540 (40.56%), Query Frame = 3
Query: 507 AQLRYLNLSKNKITVLP-ESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDA--SFEVLKVNINMITLFPVSRLTPSL-KELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNMEDITSFPSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSNL*LDFLNSIRNIINFYNFFAKSIALNFG*QENFISFATLNKYLVIFISTAV 2114
+QL ++ + + +P E I +++ L N +K LP F +L L VL LS+NE ++IP++IGNF L L +S N ++ + NI L D+S N I+ P+ + + VL +N N +T P SL ++L + +N + TL + ++ ++ IL + N E P + L L +L + N L ++P LG + LQ L V N L+ N+E +T F LS ++ S+P N L K++ ++ + NKL+ I SC+ + L L+ N L +L L LN++ N L ++P + N L+ + N + LP+ I N+ K L LD+S N+I+ +P C +K L N+ + EYL + +D LN +NII+ ++ + A G + + + T N + +S+
Sbjct: 13 SQLEVIDKRHSNLLYVPDEVIRNARSIEECFLDANQIKDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFV-HLEILDLGGNEFQEFPKSLAKLSALRELSLDNNELQNLPQELGTLKNLQQLDVSEN---------------FLEVICEEIGNLEQLTDFA-----------------------------------LSQNSLDSLPNNIGNL---KELTILKVDQNKLMSLTTHIGSCS-KLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKC-NELSIMSFRDNHIR-RLPDEIGNM------------------------KKLHVLDISINQIDRLPLSIAQCP-LKALWLSENQSQSMVKLQRDKDDNTNEEYLTCYLLPQSGIDELNHNQNIIDTQDYVNEFAA---GDRNSLVLSGTDNDSMKFRVSSGT 467 The following BLAST results are available for this feature:
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30005091 ID=SMED30005091|Name=Leucine-rich repeat-containing protein 40|organism=Schmidtea mediterranea sexual|type=transcript|length=2283bpback to top protein sequence of SMED30005091-orf-1 >SMED30005091-orf-1 ID=SMED30005091-orf-1|Name=SMED30005091-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=628bp MAYNRHFIHKRKSLRINQINSSARISPPNNEQVSFAFKVPGKNIIDDARKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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