26S proteasome regulatory subunit 4 homolog

Overview


Name	26S proteasome regulatory subunit 4 homolog
Smed ID	SMED30005019
Length (bp)	1413

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of 26S proteasome regulatory subunit 4 homolog (SMED30005019) t-SNE clustered cells

Violin plots show distribution of expression levels for 26S proteasome regulatory subunit 4 homolog (SMED30005019) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 26S proteasome regulatory subunit 4 homolog (SMED30005019) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30005019

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 7

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
nervous system	SMED30005019	SMESG000020306.1	dd_Smed_v4_1222_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30005019	SMESG000020306.1	dd_Smed_v4_1222_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30005019	SMESG000020306.1	dd_Smed_v4_1222_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30005019	SMESG000020306.1	dd_Smed_v4_1222_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30005019	SMESG000020306.1	dd_Smed_v4_1222_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30005019	SMESG000020306.1	Contig38647	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30005019	SMESG000020306.1	Contig38647	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
Match: PSMC1 (proteasome 26S subunit, ATPase 1 [Source:HGNC Symbol;Acc:HGNC:9547])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
Match: PSMC1 (proteasome 26S subunit, ATPase 1 [Source:HGNC Symbol;Acc:HGNC:9547])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 330/367 (89.92%), Postives = 355/367 (96.73%), Query Frame = 3

Query:  267 MEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:    1 MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 367

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
Match: PSMC4 (proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551])

HSP 1 Score: 417.927 bits (1073), Expect = 3.263e-143
Identity = 198/367 (53.95%), Postives = 283/367 (77.11%), Query Frame = 3

Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E+G+LA+RE R  V  +DF+KA + V+
Sbjct:   43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407

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Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E+G+LA+RE R  V  +DF+KA + V+
Sbjct:   43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
Match: PSMC4 (proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551])

HSP 1 Score: 405.986 bits (1042), Expect = 4.785e-139
Identity = 188/339 (55.46%), Postives = 264/339 (77.88%), Query Frame = 3

Query:  312 EEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            E+ +   + +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E+G+LA+RE R  V  +DF+KA + V+
Sbjct:   38 EDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 376

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
Match: rpt-2 (Probable 26S proteasome regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368])

HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0
Identity = 357/443 (80.59%), Postives = 401/443 (90.52%), Query Frame = 3

Query:   66 MGQRQSQDGEKKD--------KSKQRKYEPPIPTRVGKKKKSKG-PDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ+QS  G + +        K +++KYE PIP+R+GKKKK    PD A+KLPAV PH RC+L+LLK ERIKDYLLME+EFI+NQERLK  EE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+ LEP CSVLLNHK HAV+GVL DD DPMV+VMKLEKAPQETYAD+GGLD QIQEIKE+VELPLTHPE YEEMGI+PPKGVILYG PGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPK+VRELFRVAEENAPSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKV+MATNRIE+LDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTS+MTL ++VN+E ++ +KD+LSGADIKA+CTEAGLLALRERRMRVT EDF+K+KENVLYRK EG PE LY+
Sbjct:    1 MGQQQSGFGGRGNDRGAGDGEKKEKKKYEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKEGAPEELYL 443

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
Match: C10G11.8 (pep chromosome:WBcel235:I:6271866:6273780:-1 gene:WBGene00015688.1 transcript:C10G11.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C10G11.8)

HSP 1 Score: 466.848 bits (1200), Expect = 1.649e-162
Identity = 243/430 (56.51%), Postives = 311/430 (72.33%), Query Frame = 3

Query:  114 QRKYEPPI--PTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQ--ERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDD-NHAIVSTSVGS--EHYVSILSFVDKDMLEPNCSVLLNHKV------HAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLY 1364
            Q+K E P     ++  K   +G + ANKLP V P  +C +RLLK+ RI DYL +E+EFI  Q     +    +   E+  V  LRGTP ++  + E+ DD  HA+V    GS  E YV ILS VDKD+L  N  V++           A+VGVL D  D      K+EK P+ET+ DIGG +SQIQE+KESVELPLTHPE YEEMGI  PKGVILYG PGTGKTLLAKAVAN TSATF+R  GS+L+QK  G+G +LVR++F++A+E APSIVFIDEIDAVGTKR++++S GE+E+QRT+LELLNQLDGF+SRGDVK+IMATNRI++LDPALIRPGRIDRKIE P PDEKT+++IF+IHTS MT+ + V  E+ +  +  +SGA+IKA+CTEAG+LALR +R  V  +DF+KA ++V+  K  G PEG +
Sbjct:    9 QKKQEKPTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVKSVMLSKKGGAPEGFF 437

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
Match: rpt-3 (Probable 26S proteasome regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502])

HSP 1 Score: 400.979 bits (1029), Expect = 4.203e-137
Identity = 196/372 (52.69%), Postives = 282/372 (75.81%), Query Frame = 3

Query:  225 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKT 1340
            ++L  LER   +L + E++IK + R    E  H +E  +V  ++  P+ +G   E +D NHAIV ++ GS +YV +LS +D+++L+P CSV L+   +A+V VL  +AD  + +++ ++ P  +Y DIGGLD Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA  T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+EN+PSI+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS   S+M LS+DV++E +V   D +SGADI +IC EAG+ A+RE R  V  +D +KA +NV+ + T
Sbjct:   38 IKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQE--EVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407

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Query:  225 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKT 1340
            ++L  LER   +L + E++IK + R    E  H +E  +V  ++  P+ +G   E +D NHAIV ++ GS +YV +LS +D+++L+P CSV L+   +A+V VL  +AD  + +++ ++ P  +Y DIGGLD Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA  T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+EN+PSI+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS   S+M LS+DV++E +V   D +SGADI +IC EAG+ A+RE R  V  +D +KA +NV+ + T
Sbjct:   38 IKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQE--EVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
Match: rpt-6 (Proteasome Regulatory Particle, ATPase-like [Source:UniProtKB/TrEMBL;Acc:Q9XTT9])

HSP 1 Score: 352.443 bits (903), Expect = 5.126e-118
Identity = 167/324 (51.54%), Postives = 232/324 (71.60%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG + + +D    +V      ++ V +   +D + L     V L    +A+  +L +  DP+V++M +EK P  TY  +GGLD QI+EIKE +ELP+ HPEL++ +GI  PKGV+L+G PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E +SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP PDEK +  I  IH+ KM L   +N+          SGA++K++CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   83 VGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSE 406

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Match: Rpt2 (gene:FBgn0015282 transcript:FBtr0084520)

HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0
Identity = 386/439 (87.93%), Postives = 412/439 (93.85%), Query Frame = 3

Query:   66 MGQRQSQDG----EKKDKSKQRKYEPPIPTRVGKKKK-SKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ QS  G    +K DK K++KYEPPIPTRVGKKK+ +KGPD A KLP V PHTRC+L+LLKLERIKDYL+ME+EFI+NQERLK  +EK+EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEP CSVLLNHKVHAVVGVL DD DPMVTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF+IHTS+MTL+EDVN+   +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KE+VLYRK EGTPEGLY+
Sbjct:    1 MGQNQSAQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Match: Rpt2 (gene:FBgn0015282 transcript:FBtr0346154)

HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0
Identity = 386/439 (87.93%), Postives = 412/439 (93.85%), Query Frame = 3

Query:   66 MGQRQSQDG----EKKDKSKQRKYEPPIPTRVGKKKK-SKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ QS  G    +K DK K++KYEPPIPTRVGKKK+ +KGPD A KLP V PHTRC+L+LLKLERIKDYL+ME+EFI+NQERLK  +EK+EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEP CSVLLNHKVHAVVGVL DD DPMVTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF+IHTS+MTL+EDVN+   +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KE+VLYRK EGTPEGLY+
Sbjct:    1 MGQNQSAQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Match: Rpt3 (gene:FBgn0028686 transcript:FBtr0346274)

HSP 1 Score: 418.698 bits (1075), Expect = 6.868e-144
Identity = 196/366 (53.55%), Postives = 284/366 (77.60%), Query Frame = 3

Query:  225 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKEN 1322
            +R  KL++  +++ ++EE+IK+++R    E  H +E  +V  ++  P+ +G   E +D N  IV ++ GS +YV ILS +D+++L+P+ SV L+   +A+V VL  +AD  +++++ ++ P  +YADIGG+D Q QEI+E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS  TSKM LSEDV++E +V   D +SGADI AIC EAG+ A+RE R  V  +DF+K  +N
Sbjct:   37 VRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKN 400

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Match: Rpt3 (gene:FBgn0028686 transcript:FBtr0073436)

HSP 1 Score: 418.698 bits (1075), Expect = 6.868e-144
Identity = 196/366 (53.55%), Postives = 284/366 (77.60%), Query Frame = 3

Query:  225 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKEN 1322
            +R  KL++  +++ ++EE+IK+++R    E  H +E  +V  ++  P+ +G   E +D N  IV ++ GS +YV ILS +D+++L+P+ SV L+   +A+V VL  +AD  +++++ ++ P  +YADIGG+D Q QEI+E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS  TSKM LSEDV++E +V   D +SGADI AIC EAG+ A+RE R  V  +DF+K  +N
Sbjct:   37 VRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKN 400

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Match: Rpt3R (gene:FBgn0037742 transcript:FBtr0301536)

HSP 1 Score: 391.734 bits (1005), Expect = 1.671e-133
Identity = 185/373 (49.60%), Postives = 280/373 (75.07%), Query Frame = 3

Query:  237 KLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPE 1355
            KL+   + + ++E++IK ++R    E  H +E  +V  ++  P+ +G   E +D+N+ IV+++ GS +YV +LS +D++ L+P+ SV L+ + + +V ++  +AD  ++++  ++ P  +Y+DIGGLD Q QEI+E+VELPLTH +LY+++GI PP+GV+L+G PG GKT+LAKAVA+ T+A+F+RVVGSE +QKYLG+GP++VR+LFR+A++N+PSI+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   ++KVIMATNR +TLDPAL+RPGR+DRKIE PLPD + KR +F+  TSKM + EDV++E  +   D +S ADI AIC EAG+ A+RE R  V  +DF+K  +  + RK E   E
Sbjct:   33 KLQMELELIQVQEDYIKEEQRNLKKEFIHAQE--EVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSV-RKDEAQHE 402

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
Match: psmc1b (proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69])

HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0
Identity = 369/416 (88.70%), Postives = 401/416 (96.39%), Query Frame = 3

Query:  123 YEPPIPTRVGKKK-KSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPPIPTRVGK+K KSKGPD A+KLP V PHT+C+L+LLK +RIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTS+MT++EDV+++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPIPTRVGKRKRKSKGPDAASKLPLVTPHTQCRLKLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 747.273 bits (1928), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 397/416 (95.43%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSKG-PDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPPIPTRVGKKKK    PD A+KLP V PHT+C+L+LLK ERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLDSQIQEIKESVELPLTHPE YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTS+MT+++DV ++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPIPTRVGKKKKKVKGPDAASKLPLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

[Close]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0
Identity = 349/422 (82.70%), Postives = 382/422 (90.52%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSKG-PDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP------LPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPPIPTRVGKKKK    PD A+KLP V PHT+C+L+LLK ERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLDSQIQEIKESVELPLTHPE YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG   R   +       L + K K  I ++   +MT+++DV ++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   64 YEPPIPTRVGKKKKKVKGPDAASKLPLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGESVRSHVYSWYGFHMLIESKFKVHINAL--IRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 483

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083])

HSP 1 Score: 416.001 bits (1068), Expect = 1.146e-142
Identity = 196/364 (53.85%), Postives = 282/364 (77.47%), Query Frame = 3

Query:  237 KLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   Y+DIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS  TSKM LSE+V++E YV   D +SGADI +IC EAG+LA+RE R  V  +DF+KA + V+
Sbjct:   46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVI 407

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Query:  237 KLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   Y+DIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS  TSKM LSE+V++E YV   D +SGADI +IC EAG+LA+RE R  V  +DF+KA + V+
Sbjct:   46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVI 407

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 743.806 bits (1919), Expect = 0.000e+0
Identity = 365/416 (87.74%), Postives = 395/416 (94.95%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            Y   +PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:    7 YSHGVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 422

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Match: kiaa1456l (kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534])

HSP 1 Score: 416.387 bits (1069), Expect = 1.452e-142
Identity = 197/367 (53.68%), Postives = 282/367 (76.84%), Query Frame = 3

Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   Y+DIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E G+LA+RE R  V  +DF+KA + V+
Sbjct:   45 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVI 409

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Match: kiaa1456l (kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534])

HSP 1 Score: 404.06 bits (1037), Expect = 1.935e-138
Identity = 191/346 (55.20%), Postives = 266/346 (76.88%), Query Frame = 3

Query:  291 QERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            Q+ LK +    +EE   V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   Y+DIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E G+LA+RE R  V  +DF+KA + V+
Sbjct:   22 QKNLKKEFLHAQEE---VKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVI 364

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Match: map7 (microtubule associated protein 7 [Source:Xenbase;Acc:XB-GENE-961210])

HSP 1 Score: 351.288 bits (900), Expect = 2.606e-117
Identity = 169/324 (52.16%), Postives = 231/324 (71.30%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG +   +D    +V      +  V I   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   65 VGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 388

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Match: Psmc1 (protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Match: Psmc4 (proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:MGI Symbol;Acc:MGI:1346093])

HSP 1 Score: 417.927 bits (1073), Expect = 2.192e-143
Identity = 198/367 (53.95%), Postives = 283/367 (77.11%), Query Frame = 3

Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E+G+LA+RE R  V  +DF+KA + V+
Sbjct:   43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Match: Psmc4 (proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:MGI Symbol;Acc:MGI:1346093])

HSP 1 Score: 405.986 bits (1042), Expect = 3.584e-139
Identity = 188/339 (55.46%), Postives = 264/339 (77.88%), Query Frame = 3

Query:  312 EEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            E+ +   + +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC E+G+LA+RE R  V  +DF+KA + V+
Sbjct:   38 EDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 376

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Match: Psmc5 (protease (prosome, macropain) 26S subunit, ATPase 5 [Source:MGI Symbol;Acc:MGI:105047])

HSP 1 Score: 350.903 bits (899), Expect = 3.394e-117
Identity = 168/324 (51.85%), Postives = 231/324 (71.30%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG +   +D    +V      +  V +   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 338.191 bits (866), Expect = 1.949e-112
Identity = 155/299 (51.84%), Postives = 217/299 (72.58%), Query Frame = 3

Query:  408 AIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDF 1304
            A++ TS    +++ ++  VD + L+P   V +N   + ++  L  + D  V  M++++ P E Y+DIGGLD QIQE+ E++ LP+ H E +E +GI+PPKGV++YG PGTGKTLLA+A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR++S   G+RE+QRTMLELLNQLDGF     VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI  IH+ KM +S DVN E      DD +GA  KA+C EAG++ALR     +T+ED+
Sbjct:   83 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 381

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Match: sp|P48601|PRS4_DROME (26S proteasome regulatory subunit 4 OS=Drosophila melanogaster OX=7227 GN=Rpt2 PE=1 SV=2)

HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0
Identity = 386/439 (87.93%), Postives = 412/439 (93.85%), Query Frame = 3

Query:   66 MGQRQSQDG----EKKDKSKQRKYEPPIPTRVGKKKK-SKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ QS  G    +K DK K++KYEPPIPTRVGKKK+ +KGPD A KLP V PHTRC+L+LLKLERIKDYL+ME+EFI+NQERLK  +EK+EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEP CSVLLNHKVHAVVGVL DD DPMVTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF+IHTS+MTL+EDVN+   +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KE+VLYRK EGTPEGLY+
Sbjct:    1 MGQNQSAQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Match: sp|P62193|PRS4_RAT (26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1)

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Match: sp|P62192|PRS4_MOUSE (26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1)

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Match: sp|P62191|PRS4_HUMAN (26S proteasome regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMC1 PE=1 SV=1)

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 398/416 (95.67%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+KLP V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Match: sp|Q90732|PRS4_CHICK (26S proteasome regulatory subunit 4 OS=Gallus gallus OX=9031 GN=PSMC1 PE=2 SV=1)

HSP 1 Score: 751.125 bits (1938), Expect = 0.000e+0
Identity = 367/416 (88.22%), Postives = 396/416 (95.19%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPP+PTRVGKKKK   GPD A+K P V PHT+C+L+LLKLERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+ PSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MTL++DV ++  +M+KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KEN LY+KTEGTPEGLY+
Sbjct:   25 YEPPVPTRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Match: A0A0X3P3K8 (AAA domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR162550 PE=3 SV=1)

HSP 1 Score: 818.92 bits (2114), Expect = 0.000e+0
Identity = 400/436 (91.74%), Postives = 420/436 (96.33%), Query Frame = 3

Query:   66 MGQRQSQ--DGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQRQSQ  +G+K  K K+R+YEPPIPTR+GK ++SKGPD ANKLP V PHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNH IVSTSVGSEHYVSILSFVDK MLEP CSVLLNHKVHAVVGVL DD DPMVTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTHPELYEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR+AEENAPSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF+IHTS+MTL+EDVN+E+YV SKD+LSGADIKAICTEAGLLALRERRM+VTNEDF+KAKENVLYRK+EGTPEGLY+
Sbjct:    1 MGQRQSQQDNGKKDGKGKRREYEPPIPTRMGKHRRSKGPDTANKLPQVTPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHVIVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDDTDPMVTVMKLEKAPQETYADIGGLDAQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNMEAYVTSKDELSGADIKAICTEAGLLALRERRMKVTNEDFQKAKENVLYRKSEGTPEGLYL 436

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Match: C1LGQ4 (Proteasome 26S subunit subunit 4 ATPase OS=Schistosoma japonicum OX=6182 GN=Pros26.4 PE=2 SV=1)

HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0
Identity = 396/436 (90.83%), Postives = 421/436 (96.56%), Query Frame = 3

Query:   66 MGQRQS-QDGEKKD-KSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ+QS Q+G KKD K+K+R+++PP+PTR+GK K+SKGPD  NKLP V PHTRCKLRLLK+ERIKD+LLMEEEFIKNQERLKTDEE+HEEERSKVDDLRGTPMSVGTLEEIIDDNH +VSTSVGSEHYVSILSFVDK MLEP CSVLLNHKVHAVVGVL D+ DPMVTVMKLEKAPQETYADIGGLD QIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR+AEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTS+MTL+EDVN+E YV+SKD+LSGADIKAICTEAGLLALRERRM+VT+EDFKKAKENVLYRK+EGTPEGLY+
Sbjct:    1 MGQKQSSQEGNKKDDKTKRREFDPPVPTRMGKHKRSKGPDSTNKLPQVTPHTRCKLRLLKMERIKDFLLMEEEFIKNQERLKTDEERHEEERSKVDDLRGTPMSVGTLEEIIDDNHVVVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDETDPMVTVMKLEKAPQETYADIGGLDVQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSRMTLAEDVNLEEYVVSKDELSGADIKAICTEAGLLALRERRMKVTDEDFKKAKENVLYRKSEGTPEGLYL 436

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Match: A0A430QHS9 (26S proteasome regulatory subunit T2 OS=Schistosoma bovis OX=6184 GN=DC041_0007222 PE=3 SV=1)

HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0
Identity = 396/436 (90.83%), Postives = 421/436 (96.56%), Query Frame = 3

Query:   66 MGQRQS-QDGEKKD-KSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ+QS Q+G KKD K+K+R+++PP+PTR+GK K+SKGPD ANKLP V PHTRCKLRLLK+ERIKD+LLMEEEFIKNQERLKTDEE+HEEERSKVDDLRGTPMSVGTLEEIIDDNH +VSTSVGSEHYVSILSFVDK MLEP CSVLLNHKVHAVVGVL D+ DPMVTVMKLEKAPQETYADIGGLD QIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR+AEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTS+MTL+EDVN+E YV SKD+LSGADIKAICTEAGLLALRERRM+VT+EDFKKA+ENVLYRK+EGTPEGLY+
Sbjct:    1 MGQKQSSQEGNKKDDKTKRREFDPPVPTRMGKHKRSKGPDSANKLPQVTPHTRCKLRLLKMERIKDFLLMEEEFIKNQERLKTDEERHEEERSKVDDLRGTPMSVGTLEEIIDDNHVVVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDETDPMVTVMKLEKAPQETYADIGGLDVQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSRMTLAEDVNLEEYVSSKDELSGADIKAICTEAGLLALRERRMKVTDEDFKKARENVLYRKSEGTPEGLYL 436

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Match: A0A068YFB3 (Proteasome 26s subunit subunit 4 atpase OS=Echinococcus multilocularis OX=6211 GN=EmuJ_001101900 PE=3 SV=1)

HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0
Identity = 397/436 (91.06%), Postives = 419/436 (96.10%), Query Frame = 3

Query:   66 MGQRQSQ--DGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ+QS   DG+K  K+K+R++EPPIPTR+GK K+SKGPD ANKLP V PHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEK+EEERSKVDDLRGTPMSVGTLEEIIDDNH IVSTSVGSEHYVSILSFVDK MLEP CSVLLNHKVHAVVGVL DD DPMVTVMKLEKAPQETYADIGGLD+QIQEIKESVELPLTH ELYEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR+AEENAPSIVFIDEIDAVGTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF+IHTS+MTL+EDVN+ESYV SKD+LSGADIKA+CTEAGLLALRERRM+VTNEDF+KAKENVLYRK+EGTPEGLY+
Sbjct:    1 MGQKQSSYDDGKKSGKAKKREFEPPIPTRMGKHKRSKGPDTANKLPQVTPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKNEEERSKVDDLRGTPMSVGTLEEIIDDNHVIVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDDTDPMVTVMKLEKAPQETYADIGGLDAQIQEIKESVELPLTHSELYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLESYVTSKDELSGADIKAMCTEAGLLALRERRMKVTNEDFEKAKENVLYRKSEGTPEGLYL 436

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Match: C4QMB3 (26S protease regulatory subunit, putative OS=Schistosoma mansoni OX=6183 GN=Smp_173840 PE=3 SV=1)

HSP 1 Score: 811.601 bits (2095), Expect = 0.000e+0
Identity = 395/436 (90.60%), Postives = 421/436 (96.56%), Query Frame = 3

Query:   66 MGQRQS-QDGEKKD-KSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ+QS Q+G KKD K+K+R+++PP+PTR+GK K+SKGPD ANKLP V PHTRCKLRLLK+ERIKD+LLMEEEFIKNQERLKTDEE+HEEERSKVDDLRGTPMSVGTLEEIIDDNH +VSTSVGSEHYVSILSFVDK MLEP CSVLLNHKVHAVVGVL D+ DPMVTVMKLEKAPQETYADIGGLD QIQEIKESVELPLTHPELYEEMGI+PPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR+AEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTS+MTL+EDVN+E YV SKD+LSGADIKAICTEAGLLALRERRM+VT+EDFKKA+ENVLYRK+EGTPEGLY+
Sbjct:    1 MGQKQSSQEGNKKDDKTKRREFDPPVPTRMGKHKRSKGPDSANKLPQVTPHTRCKLRLLKMERIKDFLLMEEEFIKNQERLKTDEERHEEERSKVDDLRGTPMSVGTLEEIIDDNHVVVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDETDPMVTVMKLEKAPQETYADIGGLDVQIQEIKESVELPLTHPELYEEMGIRPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSRMTLAEDVNLEEYVTSKDELSGADIKAICTEAGLLALRERRMKVTDEDFKKARENVLYRKSEGTPEGLYL 436

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Match: psmc1a (26S proteasome regulatory subunit 4 [Source:NCBI gene;Acc:103036290])

HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0
Identity = 368/416 (88.46%), Postives = 399/416 (95.91%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKK-SKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPPIPTRVGKKKK +KGPD A+KLP V PHT+C+L+LLK ERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTS+MT+++DV ++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   25 YEPPIPTRVGKKKKRTKGPDAASKLPLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Match: psmc1b (26S proteasome regulatory subunit 4-like [Source:NCBI gene;Acc:103037200])

HSP 1 Score: 750.74 bits (1937), Expect = 0.000e+0
Identity = 377/438 (86.07%), Postives = 410/438 (93.61%), Query Frame = 3

Query:   69 GQRQS----QDGEKKDKSKQRKYEPPIPTRVGKKKKSK-GPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            GQ QS      G+K DK K++KYEPPIPTRVGKKKK   GPD A+KLP V PHT+C+L+LLK ERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLDSQIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTS+MT+++DV ++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   23 GQNQSGGHGPGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 460

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:NCBI gene;Acc:103032828])

HSP 1 Score: 419.853 bits (1078), Expect = 3.678e-144
Identity = 199/367 (54.22%), Postives = 283/367 (77.11%), Query Frame = 3

Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM LSE+V++E YV   D +SGADI +IC EAG+LA+RE R  V  +DF+KA + V+
Sbjct:   45 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLSSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVI 409

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:103027731])

HSP 1 Score: 350.903 bits (899), Expect = 2.169e-117
Identity = 168/324 (51.85%), Postives = 231/324 (71.30%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG +   +D    +V      +  V +   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:103027731])

HSP 1 Score: 348.206 bits (892), Expect = 1.189e-116
Identity = 165/300 (55.00%), Postives = 223/300 (74.33%), Query Frame = 3

Query:  444 VSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            V+IL +     + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   81 VNILLYC---WVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 377

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006168.1 (pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-1 gene:ENSPMAG00000005566.1 transcript:ENSPMAT00000006168.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 363.999 bits (933), Expect = 2.070e-124
Identity = 167/311 (53.70%), Postives = 244/311 (78.46%), Query Frame = 3

Query:  267 MEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYV 1199
            ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N  IV ++ GS +YV ILS +D+++L+P+ SV L+   +A+V VL  +AD  +T++  ++ P  TY DIGG+D Q QE++E+VELPLTH +LY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFP+PD + KR IFS  T+KM LSE+V++E  +
Sbjct:   11 VQEEYIKDEQKNLKKEYLHAQE--EVKRIQSIPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLTADQKPDVTYVDIGGMDIQKQEVREAVELPLTHFDLYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTVTAKMNLSEEVDLEDCI 319

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547])

HSP 1 Score: 354.369 bits (908), Expect = 2.652e-119
Identity = 170/324 (52.47%), Postives = 233/324 (71.91%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG + + +D    +V      +  V I   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   77 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 400

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 344.739 bits (883), Expect = 3.073e-118
Identity = 181/206 (87.86%), Postives = 191/206 (92.72%), Query Frame = 3

Query:  123 YEPPIPTRVGKKKKSKG-PDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGT 737
            YEPP+PTRVGKKKK    PD ANKLP V PHT C+L+LLKLERIKDYLLMEEEFI+NQERLK  EEK EEERSKVDDLRG+PMSVGT+EEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAVVGVL DD DP+VTVMKLEKAPQE+YADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYGAPGT
Sbjct:   25 YEPPVPTRVGKKKKKVKGPDAANKLPQVTPHTYCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKQEEERSKVDDLRGSPMSVGTMEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVVGVLSDDTDPLVTVMKLEKAPQESYADIGGLDAQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010299.1 (pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene:ENSPMAG00000009320.1 transcript:ENSPMAT00000010299.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 338.961 bits (868), Expect = 3.116e-113
Identity = 154/299 (51.51%), Postives = 218/299 (72.91%), Query Frame = 3

Query:  408 AIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDF 1304
            A++ TS    +++ ++  VD + L+P   V +N   + ++  L  + D  V  M++++ P E Y+D+GGLD QIQE+ E++ LP+TH E +E +GI+PPKGV++YG PGTGKTLLA+A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR++S   G+RE+QRTMLELLNQLDGF     VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI  IH+ KM +S DVN E      DD +GA  KA+C EAG++ALR     +T+ED+
Sbjct:   98 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDVGGLDKQIQELVEAIVLPMTHKERFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 396

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001244.1 (pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 gene:ENSPMAG00000001115.1 transcript:ENSPMAT00000001244.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 310.071 bits (793), Expect = 1.093e-101
Identity = 146/275 (53.09%), Postives = 203/275 (73.82%), Query Frame = 3

Query:  549 DPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL--YRKTEGTPEGLYM 1367
            DP VT+M++E+ P  TY+D+GG   QI++++E VE PL HPE +  +GI+PPKGV+L+G PGTGKTL A+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A +    ++F DEIDA+G  R++  +GG+ E+QRTMLEL+NQLDGFD RG++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD + +  IF IH   M++  D+  E       + +GA+I+++CTEAG+ A+R RR   T +DF +A   V+  Y K   TP   YM
Sbjct:  168 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARKAC--LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPR--YM 438

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Match: RPT2 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; N-myristoylation of Rpt2p at Gly2 is involved in regulating the proper intracellular distribution of proteasome activity by controlling the nuclear localization of the 26S proteasome [Source:SGD;Acc:S000002165])

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 321/437 (73.46%), Postives = 380/437 (86.96%), Query Frame = 3

Query:   66 MGQRQS--QDGEKKDKSKQR-KYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQ  S  QD +KK  S Q+ KYEPP+ ++ G+KK+  GP  A KLP + P TRCKL+LL++ERIKD+LL+EEEF+ N E LK  E+K EEE+ +++++RG P+S+GTLEEIIDD+HAIV++    ++YVSILSFVDK++LEP CSVLL+HK  ++VGVL DDADPMV+VMK++K+P E+Y+DIGGL+SQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGP+L R++F+VA ENAPSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFD RGDVKVIMATN+IETLDPALIRPGRIDRKI F  PD  TK++I  IHTSKM LSEDVN+E+ V +KDDLSGADI+A+CTEAGLLALRERRM+VT EDFK+AKE V+  K E   EGLY+
Sbjct:    1 MGQGVSSGQDKKKKKGSNQKPKYEPPVQSKFGRKKRKGGPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 437

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Match: RPT3 (ATPase of the 19S regulatory particle of the 26S proteasome; one of ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B [Source:SGD;Acc:S000002802])

HSP 1 Score: 374.015 bits (959), Expect = 5.896e-127
Identity = 183/365 (50.14%), Postives = 267/365 (73.15%), Query Frame = 3

Query:  225 LRLLKLERIKDYLLMEEEFIKNQER-LKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP-LPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKA 1313
             +L KLE+  + L ++E++IK+++R LK + ++ +EE   V  ++  P+ +G   E ID N  IVS++ G  + V ILS +D+++L+P+ SV L+   +A+V +L  D+D  ++VM   + P  TYAD+GGLD Q QEI+E+VELPL   +LYE++GI PP+GV+LYG PGTGKT+L KAVAN T A F+RV GSE + KYLG+GP++VR++FR+A ENAPSI+FIDE+D++ TKR+++ +G +RE+QR ++ELL Q+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFP L D + +R IF    SKM+L+ + +++S ++  D LSGA I AI  EAGL A+R+ R  +   D ++A
Sbjct:   49 FKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEE---VKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Match: RPT6 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003016])

HSP 1 Score: 342.813 bits (878), Expect = 4.097e-115
Identity = 164/324 (50.62%), Postives = 228/324 (70.37%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG + +I+ D   +V      ++ V +   ++   L+ +  V L    + +  VL + ADP+V++M +EK P  TY  +GGL  QI+EIKE +ELP+ HPEL+E +GI  PKGVILYG PGTGKTLLA+AVA+ T   F+RV G+EL+QKY+G+G ++VRELF +A E+APSI+F+DEID++G+ R E + GG+ E+QRTMLELLNQLDGF++  ++K+IMATNR++ LDPAL+RPGRIDRKIEFP P    +  I  IH+ KM L+  +N+       +  SGAD+K +CTEAG+ ALRERR+ VT EDF+ A   V+ +  E
Sbjct:   72 VGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQE 395

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Match: RPT5 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; similar to human TBP1 [Source:SGD;Acc:S000005643])

HSP 1 Score: 325.865 bits (834), Expect = 3.894e-108
Identity = 152/312 (48.72%), Postives = 223/312 (71.47%), Query Frame = 3

Query:  408 AIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            A+V TS     ++ ++  VD D L+PN  V +N   + ++  L  + D  V  M++++ P ETY+D+GGLD QI+E+ E++ LP+   + +++MGI+ PKG ++YG PGTGKTLLA+A A QT+ATFL++   +L+Q Y+G+G KLVR+ F +A+E AP+I+FIDE+DA+GTKR++S   G+RE+QRTMLELLNQLDGF S   VKV+ ATNR++ LDPAL+R GR+DRKIEFPLP E ++ +I  IH+ KMT  +D+N +    S D+ +GA +KA+  EAG++ALR  +  V +EDF +    V  RK++
Sbjct:  117 AVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSK 428

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Match: RPT1 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance [Source:SGD;Acc:S000001628])

HSP 1 Score: 306.605 bits (784), Expect = 3.727e-100
Identity = 143/269 (53.16%), Postives = 197/269 (73.23%), Query Frame = 3

Query:  549 DPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL--YRKTEGT 1349
            DP VT+M +E+ P  TY+D+GG   QI++++E VELPL  PE +  +GI PPKG++LYG PGTGKTL A+AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A      I+F DEIDAVG  R++  +GG+ E+QRTMLEL+ QLDGFD RG++KV+ ATNR  TLDPAL+RPGRIDRK+EF LPD + +  IF IH+  M++   +  E       + +GA+++++CTEAG+ A+R RR   T +DF KA + V+  Y+K   T
Sbjct:  192 DPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSST 460

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Match: EDO29929 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T284])

HSP 1 Score: 499.975 bits (1286), Expect = 4.749e-178
Identity = 242/270 (89.63%), Postives = 258/270 (95.56%), Query Frame = 3

Query:  123 YEPPIPTRVGKK-KKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKR 929
            YEPP+P+RVGK+ KK+KGPD ANKLP V PH  C+L+LLKL+RIKD+LLMEEEFI+NQERLK  EEKHEEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP C+VLLNHKVHAVVGVL DDADPMVTVMKLEKAPQE+YADIGGLD+QIQEIKESVELPLTHPELYEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVAEE+APSIVFIDEIDA+GTKR
Sbjct:   26 YEPPVPSRVGKRQKKAKGPDAANKLPVVTPHRNCRLKLLKLDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAEEHAPSIVFIDEIDAIGTKR 295

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Match: EDO43481 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYL2])

HSP 1 Score: 413.69 bits (1062), Expect = 3.055e-142
Identity = 195/362 (53.87%), Postives = 280/362 (77.35%), Query Frame = 3

Query:  237 KLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKEN 1322
            KLE+  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N  IV+++ GS +YV ILS +DK++L+P+ SV L+   +A+V +L  +AD  + ++  E+ P  +YA+IGG+D Q QEI+E+VELPLTH ELY+++GI PP+GV+LYG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  T+KM LSE+V++E YV   D +SGADI A+C EAG+ A+RE R  +  +DF+K  +N
Sbjct:   45 KLEKQLEFLEVQEEYIKDEQKNLKKELLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDYVARPDKISGADINAVCQEAGMQAVRENRYIILAKDFEKGYKN 404

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Match: EDO26554 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TBQ1])

HSP 1 Score: 370.163 bits (949), Expect = 2.139e-126
Identity = 174/321 (54.21%), Postives = 252/321 (78.50%), Query Frame = 3

Query:  237 KLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYV 1199
            KLE+  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N  IV+++ GS +YV ILS +DK++L+P+ SV L+   +A+V +L  +AD  + ++  E+ P  +YA+IGG+D Q QEI+E+VELPLTH ELY+++GI PP+GV+LYG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  T+KM LSE+V++E  +
Sbjct:   19 KLEKQLEFLEVQEEYIKDEQKNLKKELLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDCI 337

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Match: EDO49524 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGH4])

HSP 1 Score: 354.755 bits (909), Expect = 2.283e-119
Identity = 184/377 (48.81%), Postives = 256/377 (67.90%), Query Frame = 3

Query:  240 LERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLR---------GTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            + +I++  L+  E IKN  RL   E +  E  +KV  LR         G+   VG + + +D    +V      +  V I   +D   + PNC V L +  + +  +L +  DP+V++M +EK P  TY  +GGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ ++ I  IH+ KM L+  +N++         SGA+IK +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   17 ITKIEELQLVVTEKIKNLRRL---EAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGIDMAEVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARQDILKIHSRKMNLTRGINLKKIAELMPGASGAEIKGVCTEAGMYALRERRVHVTQEDFEMAVTKVMQKDSE 388

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Match: EDO37502 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFP4])

HSP 1 Score: 333.569 bits (854), Expect = 1.023e-110
Identity = 157/316 (49.68%), Postives = 223/316 (70.57%), Query Frame = 3

Query:  408 AIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDF--------KKAKENVLY 1331
            A++ TS    +++ ++  V+ + L P   V +N   + ++  L  + D  V  M++++ P E Y+DIGGLD QIQE+ E++ LP+TH + +E +GI PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR++S   G+RE+QRTMLELLNQLDGF S  D+KVI ATNR++ LDPAL+R GR+DRKIEFP PD++ + RI  IH+ KM +S DVN +      DD +GA +KA+C EAG++ALR     V +ED+         K K N++Y
Sbjct:  111 AVIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQELVEAIVLPMTHKDRFENLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHEDYMDGIMEVNAKKKANLVY 426

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Match: psmc1a (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:101161360])

HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0
Identity = 367/416 (88.22%), Postives = 399/416 (95.91%), Query Frame = 3

Query:  123 YEPPIPTRVGK-KKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            YEPPIPTRVGK KKK+KGPD A+KLP + PHT+C+L+LLK ERIKDYLLMEEEFI+NQE++K  EEK EEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD+LEP CSVLLNHKVHAV+GVL+DD DP+VTVMK+EKAPQETYADIGGLD+QIQEIKESVELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE+APSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTS+MT+++DV ++  +++KDDLSGADIKAICTEAGL+ALRERRM+VTNEDFKK+KENVLY+K EGTPEGLY+
Sbjct:   28 YEPPIPTRVGKRKKKTKGPDAASKLPLITPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 443

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:NCBI gene;Acc:101162317])

HSP 1 Score: 418.698 bits (1075), Expect = 7.974e-144
Identity = 198/367 (53.95%), Postives = 283/367 (77.11%), Query Frame = 3

Query:  228 RLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVL 1328
            R  KL++  ++L ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D N AIV ++ GS +YV ILS +D+++L+PN SV L+   +A+V VL  +AD  + ++  ++ P   YADIGG+D Q QE++E+VELPLTH ELY+++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +FS  TSKM LSE+V++E YV   D +SGADI +IC EAG+LA+RE R  V  +DF+KA + V+
Sbjct:   42 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQE--EVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVI 406

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 352.058 bits (902), Expect = 5.380e-118
Identity = 168/324 (51.85%), Postives = 232/324 (71.60%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG +  ++D    +V      +  V +   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   65 VGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 388

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 352.058 bits (902), Expect = 6.979e-118
Identity = 168/324 (51.85%), Postives = 232/324 (71.60%), Query Frame = 3

Query:  372 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTE 1343
            VG +  ++D    +V      +  V +   +D + + PNC V L +  + +  +L +  DP+V++M +EK P  TY  IGGLD QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QK++G+G ++VRELF +A E+APSI+F+DEID++G+ R E  SGG+ E+QRTMLELLNQLDGF++  ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+ +  I  IH+ KM L+  +N+          SGA++K +CTEAG+ ALRERR+ VT EDF+ A   V+ + +E
Sbjct:   73 VGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:100301600])

HSP 1 Score: 336.265 bits (861), Expect = 2.496e-111
Identity = 154/299 (51.51%), Postives = 216/299 (72.24%), Query Frame = 3

Query:  408 AIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDF 1304
            A++ TS    +++ ++  VD + L+P   V +N   + ++  L  + D  V  M++++ P E Y+DIGGLD QIQE+ E++ LP+ H E +E +GI+PPKGV++YG PGTGKTLLA+A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR++S   G+RE+QRTMLELLNQLDGF     VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI  IH+ KM +S DVN E      DD +GA  KA+C EAG++ALR     + +ED+
Sbjct:  110 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDY 408

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Match: SMESG000020306.1 (SMESG000020306.1)

HSP 1 Score: 882.863 bits (2280), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 3

Query:   66 MGQRQSQDGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            MGQRQSQDGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM
Sbjct:    1 MGQRQSQDGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 434

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Match: SMESG000020307.1 (SMESG000020307.1)

HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0
Identity = 334/430 (77.67%), Postives = 386/430 (89.77%), Query Frame = 3

Query:   78 QSQDGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM 1367
            QS D +K+D SKQ+KYEPP+PT +GKKK+SKG  +A KLP+++PHTRC LR LKLERIKDYLL+E+EFI+NQE L  D+ + E ER+K++D+RG+P+ VGTLEEIIDD HAIVST+  SEHYV+ILSFVDK+ML P+CSVLLNHK+HA+VGVL DD DP+V  MKLEKAP+ETY DIGGL+ QIQEIKE+VELPLT P+LYE+MGIK PKGVILYG PGTGKTLLAKAVAN+TSATFLR+VGSELIQKY G+GPKLVR+LF+VAEENAPSIVFIDE+DAVGTKRY+SNSGGEREIQRTMLELLNQLDGFD+R DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHTSKM +S DV+ E ++ SK++LSGADIKAICTEAGLLALRERRM +T  DF KAKENV+YRK +  P+GLYM
Sbjct:    2 QSND-KKRDPSKQKKYEPPLPTTIGKKKQSKGVSLAEKLPSIMPHTRCLLRKLKLERIKDYLLIEQEFIENQEHLNNDKNQTEAERTKLEDIRGSPLVVGTLEEIIDDTHAIVSTTGSSEHYVTILSFVDKEMLSPSCSVLLNHKIHAIVGVLEDDIDPLVASMKLEKAPKETYEDIGGLEEQIQEIKEAVELPLTQPQLYEDMGIKAPKGVILYGEPGTGKTLLAKAVANKTSATFLRIVGSELIQKYSGEGPKLVRQLFKVAEENAPSIVFIDEVDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDTRHDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDDKTKRRIFDIHTSKMNVSNDVDFEVFISSKEELSGADIKAICTEAGLLALRERRMCITMSDFVKAKENVIYRKKDSVPQGLYM 430

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Match: SMESG000016975.1 (SMESG000016975.1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 275/387 (71.06%), Postives = 328/387 (84.75%), Query Frame = 3

Query:  135 IPTRVGKKKKSKGPDMANKLPAVVPHTRCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTN 1295
            IPT +GK+KK KG  +A K+P V P+  CKLR L+L+RI DYLLMEEE +   +    DE+K + E   ++DLRG  M + TLEEIID++HAIVS     ++YV+I SFVDK  LE + SVL++ ++  +VG+  D+AD  ++ MK++KAP ETYADIGGL+++IQEIKE+VELPLTHP++YEEMGIKPPKGVILYG PGTGKTLLAKAVANQT+ATF+R+VGSELIQKY GDGPKLVRELF++AEENAPSIVFIDEIDAVGTKRY+SNSGGE+EIQRTMLELLNQLDGFDSR DVKVIMATNRIETLDPALIRPGRIDRKIE PLP+  TK+RIF+IHTSKMTL++DVN E +V +K++LSGADIKAICTEAGLLALRERR  V N
Sbjct:   39 IPTDIGKRKKCKGSTVAEKIPFVKPNFACKLRQLQLDRINDYLLMEEELVDRFQDHHCDEDKIKNEMKVIEDLRGETMIIATLEEIIDEDHAIVSVPAYGDYYVNIRSFVDKSKLELSGSVLVDEEICGIVGIYEDEADSKLSSMKIDKAPTETYADIGGLENEIQEIKEAVELPLTHPQMYEEMGIKPPKGVILYGEPGTGKTLLAKAVANQTNATFIRIVGSELIQKYAGDGPKLVRELFKMAEENAPSIVFIDEIDAVGTKRYDSNSGGEKEIQRTMLELLNQLDGFDSRSDVKVIMATNRIETLDPALIRPGRIDRKIEIPLPNSTTKQRIFNIHTSKMTLADDVNFEIFV-TKENLSGADIKAICTEAGLLALRERRRCVEN 424

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Match: SMESG000022591.1 (SMESG000022591.1)

HSP 1 Score: 408.297 bits (1048), Expect = 6.886e-140
Identity = 192/363 (52.89%), Postives = 280/363 (77.13%), Query Frame = 3

Query:  225 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKA 1313
            +++ KLE+   ++ ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK++L+PN SV L+   +A+V VL  +AD  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH ELY+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM L++DV++E  V   D +SGADI +IC EAG+ A+RE R  V  +DF+K 
Sbjct:   38 VKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQE--EVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKG 398

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BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Match: SMESG000065667.1 (SMESG000065667.1)

HSP 1 Score: 387.111 bits (993), Expect = 7.475e-132
Identity = 178/341 (52.20%), Postives = 262/341 (76.83%), Query Frame = 3

Query:  333 RSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKAKENVLYRKTEGTPE 1355
            + +V  ++ TP++VG   + ID++  IV+T     +YV ILS +DK++L  N +V LN    A+V +LI ++D  + V++ ++ P  T++ IGGLD+Q QE++E++ELPLT+P L++++GI  P+GV++YG PG GKT+LAKAVAN+T+ATF+R  GSE +QKYLGDGPK+VR++F++A+ NAPSI+FIDEID++ T+R++S +G +RE+QR ++ELL Q+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD++ KR +FS  TSKM LS D++++ +    D +SGADI +IC EAG+LA+R+ R ++T +DF+ A +  L RK E  PE
Sbjct:   52 KEEVKRIQSTPLAVGQFIQAIDNDSGIVNTECDKNYYVPILSTLDKELLTKNATVALNKGSKALVDILIPESDSSIKVLRDDEKPDVTFSMIGGLDTQKQEMREAIELPLTNPGLFKQLGIDAPRGVLMYGPPGCGKTMLAKAVANETNATFIRANGSEFVQKYLGDGPKMVRDIFKLAKLNAPSIIFIDEIDSIATRRFDSKTGADREVQRILIELLTQMDGFDQSVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDKRQKRMVFSTVTSKMNLSLDIDLDEFASRNDQISGADINSICQEAGMLAIRDNRYQITIKDFEAAYKTAL-RKDEEMPE 391

The following BLAST results are available for this feature:

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PSMC1	0.000e+0	88.46	proteasome 26S subunit, ATPase 1 [Source:HGNC Symb...	[more]
PSMC1	0.000e+0	89.92	proteasome 26S subunit, ATPase 1 [Source:HGNC Symb...	[more]
PSMC4	3.263e-143	53.95	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC4	3.263e-143	53.95	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC4	4.785e-139	55.46	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rpt-2	0.000e+0	80.59	Probable 26S proteasome regulatory subunit 4 [Sou...	[more]
C10G11.8	1.649e-162	56.51	pep chromosome:WBcel235:I:6271866:6273780:-1 gene:...	[more]
rpt-3	4.203e-137	52.69	Probable 26S proteasome regulatory subunit 6B [So...	[more]
rpt-3	4.203e-137	52.69	Probable 26S proteasome regulatory subunit 6B [So...	[more]
rpt-6	5.126e-118	51.54	Proteasome Regulatory Particle, ATPase-like [Sour...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rpt2	0.000e+0	87.93	gene:FBgn0015282 transcript:FBtr0084520	[more]
Rpt2	0.000e+0	87.93	gene:FBgn0015282 transcript:FBtr0346154	[more]
Rpt3	6.868e-144	53.55	gene:FBgn0028686 transcript:FBtr0346274	[more]
Rpt3	6.868e-144	53.55	gene:FBgn0028686 transcript:FBtr0073436	[more]
Rpt3R	1.671e-133	49.60	gene:FBgn0037742 transcript:FBtr0301536	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc1b	0.000e+0	88.70	proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc...	[more]
psmc1a	0.000e+0	88.46	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]
psmc1a	0.000e+0	82.70	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]
psmc4	1.146e-142	53.85	proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:...	[more]
psmc4	1.146e-142	53.85	proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc1	0.000e+0	88.46	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc1	0.000e+0	87.74	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
kiaa1456l	1.452e-142	53.68	kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534]	[more]
kiaa1456l	1.935e-138	55.20	kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534]	[more]
map7	2.606e-117	52.16	microtubule associated protein 7 [Source:Xenbase;A...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Psmc1	0.000e+0	88.46	protease (prosome, macropain) 26S subunit, ATPase ...	[more]
Psmc4	2.192e-143	53.95	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc4	3.584e-139	55.46	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc5	3.394e-117	51.85	protease (prosome, macropain) 26S subunit, ATPase ...	[more]
Psmc3	1.949e-112	51.84	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P48601\|PRS4_DROME	0.000e+0	87.93	26S proteasome regulatory subunit 4 OS=Drosophila ...	[more]
sp\|P62193\|PRS4_RAT	0.000e+0	88.46	26S proteasome regulatory subunit 4 OS=Rattus norv...	[more]
sp\|P62192\|PRS4_MOUSE	0.000e+0	88.46	26S proteasome regulatory subunit 4 OS=Mus musculu...	[more]
sp\|P62191\|PRS4_HUMAN	0.000e+0	88.46	26S proteasome regulatory subunit 4 OS=Homo sapien...	[more]
sp\|Q90732\|PRS4_CHICK	0.000e+0	88.22	26S proteasome regulatory subunit 4 OS=Gallus gall...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0X3P3K8	0.000e+0	91.74	AAA domain-containing protein OS=Schistocephalus s...	[more]
C1LGQ4	0.000e+0	90.83	Proteasome 26S subunit subunit 4 ATPase OS=Schisto...	[more]
A0A430QHS9	0.000e+0	90.83	26S proteasome regulatory subunit T2 OS=Schistosom...	[more]
A0A068YFB3	0.000e+0	91.06	Proteasome 26s subunit subunit 4 atpase OS=Echinoc...	[more]
C4QMB3	0.000e+0	90.60	26S protease regulatory subunit, putative OS=Schis...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc1a	0.000e+0	88.46	26S proteasome regulatory subunit 4 [Source:NCBI g...	[more]
psmc1b	0.000e+0	86.07	26S proteasome regulatory subunit 4-like [Source:N...	[more]
psmc4	3.678e-144	54.22	proteasome 26S subunit, ATPase 4 [Source:NCBI gene...	[more]
psmc5	2.169e-117	51.85	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc5	1.189e-116	55.00	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000006168.1	2.070e-124	53.70	pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-...	[more]
psmc5	2.652e-119	52.47	proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:...	[more]
psmc1a	3.073e-118	87.86	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]
ENSPMAT00000010299.1	3.116e-113	51.51	pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene...	[more]
ENSPMAT00000001244.1	1.093e-101	53.09	pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 ge...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPT2	0.000e+0	73.46	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT3	5.896e-127	50.14	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT6	4.097e-115	50.62	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT5	3.894e-108	48.72	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT1	3.727e-100	53.16	ATPase of the 19S regulatory particle of the 26S p...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO29929	4.749e-178	89.63	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43481	3.055e-142	53.87	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26554	2.139e-126	54.21	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49524	2.283e-119	48.81	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37502	1.023e-110	49.68	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc1a	0.000e+0	88.22	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc4	7.974e-144	53.95	proteasome 26S subunit, ATPase 4 [Source:NCBI gene...	[more]
psmc5	5.380e-118	51.85	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc5	6.979e-118	51.85	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc3	2.496e-111	51.51	proteasome 26S subunit, ATPase 3 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 4 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000020306.1	0.000e+0	100.00	SMESG000020306.1	[more]
SMESG000020307.1	0.000e+0	77.67	SMESG000020307.1	[more]
SMESG000016975.1	0.000e+0	71.06	SMESG000016975.1	[more]
SMESG000022591.1	6.886e-140	52.89	SMESG000022591.1	[more]
SMESG000065667.1	7.475e-132	52.20	SMESG000065667.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30005019 ID=SMED30005019|Name=26S proteasome regulatory subunit 4 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1413bp
TTCAGAATCAAATATCGGATTATCTTAAATTTTTTGCTGCATAATAAATT
CTTTATATTTGATTAATGGGGCAAAGACAATCTCAAGATGGTGAGAAGAA
GGATAAAAGCAAACAACGAAAATATGAACCGCCAATTCCAACAAGAGTTG
GAAAAAAGAAAAAAAGTAAGGGACCCGATATGGCTAATAAATTACCAGCA
GTTGTGCCCCATACACGATGTAAATTAAGGCTGTTAAAATTAGAACGAAT
TAAAGATTACTTATTGATGGAAGAAGAATTTATAAAAAATCAAGAAAGAT
TAAAAACCGATGAAGAAAAGCACGAAGAAGAAAGATCGAAAGTTGATGAT
TTACGTGGAACGCCTATGTCTGTTGGGACGTTAGAAGAAATTATCGATGA
TAATCACGCTATTGTTTCTACTTCTGTTGGCAGTGAACATTATGTTAGTA
TTTTGTCTTTTGTAGACAAGGATATGCTTGAACCAAACTGTTCGGTGTTA
CTTAATCACAAAGTTCATGCGGTTGTTGGAGTTTTAATTGATGACGCAGA
TCCAATGGTAACTGTAATGAAATTAGAGAAGGCGCCACAAGAAACATATG
CAGATATCGGAGGATTGGATTCACAAATTCAAGAAATTAAAGAATCTGTT
GAGTTGCCACTAACGCACCCTGAATTGTACGAGGAAATGGGAATAAAGCC
TCCAAAGGGAGTGATTTTGTATGGAGCTCCGGGTACTGGGAAAACTCTAT
TGGCTAAAGCTGTAGCAAATCAAACATCAGCAACATTTTTAAGAGTTGTT
GGTTCGGAGCTTATTCAAAAATATTTAGGTGATGGTCCGAAATTAGTTAG
AGAATTATTTAGAGTCGCTGAGGAGAATGCACCATCGATTGTTTTTATTG
ATGAAATCGATGCAGTTGGAACAAAAAGATATGAATCAAATTCTGGTGGG
GAACGTGAAATCCAACGAACGATGCTCGAATTGCTTAACCAACTTGATGG
ATTCGATTCAAGAGGTGATGTTAAAGTTATAATGGCTACAAACCGAATCG
AAACTCTTGATCCGGCTCTCATTAGACCCGGCAGAATAGACAGAAAAATC
GAGTTTCCTTTACCCGATGAGAAAACAAAGCGTAGAATTTTCTCTATCCA
TACTTCCAAAATGACTTTATCTGAAGATGTTAATGTCGAATCGTATGTCA
TGTCGAAGGATGATTTATCTGGGGCTGACATTAAAGCTATCTGTACAGAG
GCAGGTTTGTTGGCATTGCGAGAGCGTAGGATGCGTGTAACAAATGAAGA
TTTCAAAAAAGCAAAGGAAAATGTGCTTTATAGAAAAACGGAAGGAACGC
CAGAAGGATTGTATATGTGAAATGCTGTCGTATTGAATAAATGTTTGTTG
ACTTGAAAAAAAA

protein sequence of SMED30005019-orf-1

>SMED30005019-orf-1 ID=SMED30005019-orf-1|Name=SMED30005019-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=435bp
MGQRQSQDGEKKDKSKQRKYEPPIPTRVGKKKKSKGPDMANKLPAVVPHT
RCKLRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTP
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKV
HAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLT
HPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI
QKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQ
RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP
DEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLA
LRERRMRVTNEDFKKAKENVLYRKTEGTPEGLYM*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000429	neoblast

Vocabulary: **INTERPRO**
Term	Definition
IPR041569	AAA_lid_3
IPR032501	Prot_ATP_ID_OB
IPR005937	26S_Psome_P45-like
IPR035244	26S_subunit_4
IPR003593	AAA+_ATPase
IPR027417	P-loop_NTPase
IPR003959	ATPase_AAA_core
IPR003960	ATPase_AAA_CS

Vocabulary: **molecular function**
Term	Definition
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0016787	hydrolase activity
GO:0016887	ATPase activity
GO:0017025	TBP-class protein binding
GO:0036402	proteasome-activating ATPase activity

Vocabulary: **cellular component**
Term	Definition
GO:0000502	proteasome complex
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005838	proteasome regulatory particle
GO:0008540	proteasome regulatory particle, base subcomplex
GO:0031595	nuclear proteasome complex
GO:0031597	cytosolic proteasome complex

Vocabulary: **biological process**
Term	Definition
GO:0006974	cellular response to DNA damage stimulus
GO:0030163	protein catabolic process
GO:0030433	ubiquitin-dependent ERAD pathway
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045899	positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:1901800	positive regulation of proteasomal protein catabolic process

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 212..351 e-value: 1.4E-21 score: 87.6
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 382..415 e-value: 2.1E-9 score: 37.1
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 216..349 e-value: 1.8E-41 score: 141.6
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 354..430 e-value: 1.4E-21 score: 78.1
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 169..349 e-value: 8.6E-68 score: 229.7
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 101..168 e-value: 4.6E-27 score: 95.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 6..433
None	No IPR available	CDD	cd00009	AAA	coord: 182..349 e-value: 3.57139E-27 score: 104.15
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 103..157 e-value: 2.9E-10 score: 40.0
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 72..420 e-value: 3.9E-138 score: 458.5
IPR035244	26S Proteasome regulatory subunit 4	PANTHER	PTHR23073:SF77	26S PROTEASOME REGULATORY SUBUNIT 4	coord: 6..433
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 319..337
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 174..428