RIB43A protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30004949 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12Note: Hover over icons to view figure legend
Homology
BLAST of RIB43A protein vs. Ensembl Human
Match: RIBC2 (RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]) HSP 1 Score: 236.498 bits (602), Expect = 1.160e-73 Identity = 161/374 (43.05%), Postives = 234/374 (62.57%), Query Frame = 2 Query: 77 LPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 LP D ++ A + RR E RQ R+FN++ R IG D +A QV D+K +E E+ +AA+ +ND I +L R+ D + L + +N+F+ Q+PETRRE+DL DP ALKKD PAR D+D R ++ MQKF GEDLN R K+Q+ Q +W+ +Q + + A Q+ A+ LY R + DE A +L E R+A+ + +N + A E ER + + +QE +D L I N L DLL+ NP QA S+FGP R+VPDR+KGMT EQL++I Q+ QI++ R Q E+ R+ +WDR+R+ A+A L+ E+++ R+ +L + + NL L+KEQ L ++++N EVYTNQPT YF QFNT SR Sbjct: 10 LPRDLRQDANLAKRRHAELCRQKRVFNARNRIIGGDTEAWDVQVHDQKIKEATEKARHETFAAEMRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSDNDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETRLQFDETAKHLQKLESTTRKAVCASVKDFNKSQAIESVERKKQEKKQEQEDNLAEITNLLRGDLLSENPQQAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQIQEKLRLQEEKRQRDLDWDRRRIQGARATLLFERQQWRRQRDLRRALDSSNLSLAKEQHLQKKYMN-EVYTNQPTGDYFTQFNTGSR 382
BLAST of RIB43A protein vs. Ensembl Human
Match: RIBC1 (RIB43A domain with coiled-coils 1 [Source:HGNC Symbol;Acc:HGNC:26537]) HSP 1 Score: 190.66 bits (483), Expect = 4.068e-56 Identity = 153/380 (40.26%), Postives = 212/380 (55.79%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQ-IKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MY + D KEAA I RR+RE++RQ+R FN + R +G+D QAL QV D+K RE ER+ E AY ++ D + +L + + D R+L K + EFR QQ + RE+ L+DP + K P + + G AS+Q F GEDL+ R + Q+GQ ERQ ++++A+ + D L + R MD +A +LA EE+CR AM A + N A A R R + Q+E L I + SDLLT NP A P R++P +KGMTPEQ I KEQE Q K RQ E+ L + EW Q ++ A+A L LE++E + + N L+ EQK Q++LN +YTNQPTA Y QFNT+SR Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTDALSNQLRLAMDAQATHLARLEESCRAAMMCAMANANKAQAAVQAGRQRCERQREQKANLAEIQHQSTSDLLTENPQVAQHPMAPYRVLPYCWKGMTPEQQAAIRKEQEVQRSKKQAHRQAEKTL-DTEWKSQTMSSAQAVLELEEQERELCAVFQRGLGSFNQQLANEQKAQQDYLNSVIYTNQPTAQYHQQFNTSSR 379
BLAST of RIB43A protein vs. Ensembl Human
Match: RIBC1 (RIB43A domain with coiled-coils 1 [Source:HGNC Symbol;Acc:HGNC:26537]) HSP 1 Score: 98.5969 bits (244), Expect = 9.091e-24 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQV 541 MY + D KEAA I RR+RE++RQ+R FN + R +G+D QAL QV D+K RE ER+ E AY ++ D + +L + + D R+L K + EFR QQ + RE+ L+DP + K P + + G AS+Q F GEDL+ R + Q+GQ Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQF 160
BLAST of RIB43A protein vs. Ensembl Human
Match: RIBC1 (RIB43A domain with coiled-coils 1 [Source:HGNC Symbol;Acc:HGNC:26537]) HSP 1 Score: 98.5969 bits (244), Expect = 1.552e-23 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQV 541 MY + D KEAA I RR+RE++RQ+R FN + R +G+D QAL QV D+K RE ER+ E AY ++ D + +L + + D R+L K + EFR QQ + RE+ L+DP + K P + + G AS+Q F GEDL+ R + Q+GQ Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQF 160
BLAST of RIB43A protein vs. Ensembl Human
Match: RIBC1 (RIB43A domain with coiled-coils 1 [Source:HGNC Symbol;Acc:HGNC:26537]) HSP 1 Score: 73.559 bits (179), Expect = 2.688e-14 Identity = 62/152 (40.79%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 560 QMADKERAEQAQREADRLYDLK----RREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQ-IKDNKRRQMEEDLRNKEWDRQ 1000 Q+ D++R E A+R + YD R MD +A +LA EE+CR AM A + N A A R R + Q+E L I + SDLLT NP A P R++P +KGMTPEQ I KEQE Q K RQ E+ L + EW Q Sbjct: 48 QVGDRKRREAAERSKEAAYDALSNQLRLAMDAQATHLARLEESCRAAMMCAMANANKAQAAVQAGRQRCERQREQKANLAEIQHQSTSDLLTENPQVAQHPMAPYRVLPYCWKGMTPEQQAAIRKEQEVQRSKKQAHRQAEKTL-DTEWKSQ 198 HSP 2 Score: 48.9062 bits (115), Expect = 5.893e-6 Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRN------DSIATLLGR 307 MY + D KEAA I RR+RE++RQ+R FN + R +G+D QAL QV D+K RE ER+ E AY DA+ N D+ AT L R Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAY--DALSNQLRLAMDAQATHLAR 86
BLAST of RIB43A protein vs. Ensembl Fly
Match: CG7264 (gene:FBgn0036214 transcript:FBtr0076035) HSP 1 Score: 117.857 bits (294), Expect = 3.102e-29 Identity = 91/293 (31.06%), Postives = 157/293 (53.58%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATL----LGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANS------QYNLALAREMN-ERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWD 994 IFN+K R G+D + L +Q+ +KK++ + + + + L ++Q R ++ LN +R +Q+ E RRE+DL DP+ LKK +P RV D+D G++S Q F GEDL N R + Q+ Q W ++Q+ +++RAE A+++AD + MD C +E + + N Q+N+ +A++ +R R K ++ DD + I N L SD+LT NP A S P + + ++GMTPE+L+ Q+ Q++ + +R+ E + +K+W+ Sbjct: 33 IFNAKQRLYGLDLEMLDRQILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQ----RVVDSDLNYYRCRYQRKEQRREFDLNDPNFLKKARPTRVADNDISLGVSSAQIFQGEDLYNSDRKQRQREQQRAWLDQQVQERKRAEDARKQADNVL------MDNVGCRDKHLQEMAKSDHQMRNQVIQRVRQFNINMAKQKQLDREREKREKYEDD-MAEIYNMLSSDMLTENPDVAQSRTDPNKKIAFMYRGMTPEELRVFRLGQDQQLRLSIQRKTEAQMMDKQWE 314
BLAST of RIB43A protein vs. Ensembl Fly
Match: CG7264 (gene:FBgn0036214 transcript:FBtr0332130) HSP 1 Score: 117.857 bits (294), Expect = 3.102e-29 Identity = 91/293 (31.06%), Postives = 157/293 (53.58%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATL----LGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANS------QYNLALAREMN-ERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWD 994 IFN+K R G+D + L +Q+ +KK++ + + + + L ++Q R ++ LN +R +Q+ E RRE+DL DP+ LKK +P RV D+D G++S Q F GEDL N R + Q+ Q W ++Q+ +++RAE A+++AD + MD C +E + + N Q+N+ +A++ +R R K ++ DD + I N L SD+LT NP A S P + + ++GMTPE+L+ Q+ Q++ + +R+ E + +K+W+ Sbjct: 33 IFNAKQRLYGLDLEMLDRQILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQ----RVVDSDLNYYRCRYQRKEQRREFDLNDPNFLKKARPTRVADNDISLGVSSAQIFQGEDLYNSDRKQRQREQQRAWLDQQVQERKRAEDARKQADNVL------MDNVGCRDKHLQEMAKSDHQMRNQVIQRVRQFNINMAKQKQLDREREKREKYEDD-MAEIYNMLSSDMLTENPDVAQSRTDPNKKIAFMYRGMTPEELRVFRLGQDQQLRLSIQRKTEAQMMDKQWE 314
BLAST of RIB43A protein vs. Ensembl Zebrafish
Match: ribc2 (RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]) HSP 1 Score: 176.407 bits (446), Expect = 5.745e-51 Identity = 132/350 (37.71%), Postives = 205/350 (58.57%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 IF+ K+R IG+D AL QQ+K+++E+E E N YA D + +D IA +L +RQ D R+LNK + +FR QQ +RRE+DL DP+ LKK + R+ P GL GEDL K R + Q+ Q+ W +Q + ERA+ +++ + YD R +D RA L EE +R + IA +NLALA E+ R ++++E ++ T I N L DLL NP Q +S G R+ D +KGM+P++L+ + Q Q +D KR ME+ ++ + ++R++ A+AAL+LE+++ R EL + + + N L+ ++ L ++VYTN P Y+ QFNT+SR Sbjct: 30 IFSDKVRTIGVDIDALGQQIKERREKEQREANELKVYADDLLCSDGIACILEQRQKKDERQLNKDIVQFRQQFQQASSRREFDLNDPELLKKQEGQRIL---P--GLV------GEDLGQKNRLRKQQEQLYSWTTQQKEEVERAKLQRKQEENQYDQIRMSLDSRALELQKMEEQTKRDLLIATKDFNLALAAEITHRRLQEHREEEENNQTEIYNQLNGDLLMENPEQNVSVLGLSRLRRDCYKGMSPQELQTYTQYQRQQAEDRKRANMEQRQKDLQEHQERMSSARAALLLERQQARINKELRRAMDNSNSQLAHIHDARKKHL-QDVYTNIPDERYYSQFNTSSR 367
BLAST of RIB43A protein vs. Ensembl Zebrafish
Match: ribc1 (RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]) HSP 1 Score: 147.902 bits (372), Expect = 4.394e-40 Identity = 131/388 (33.76%), Postives = 221/388 (56.96%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIR-ELNKILNEFRSLHQQPETRREWDL-YDPDALKKDKPARVCDDDPRCGL--ASMQKFDGEDLNNKARNKYQKGQVNDWNER-QMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAI----SAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYK+DLPVD+ + RR+ E +R+SRIFN++ R IG+D +AL +Q DK+ER+ +E+ +++Y + D +A + +++ D++R EL + L +FR++HQ+ E R+ D+ YD +K P C+ P L ASMQ F GE + + + Q ++N+ N R Q ++E+ + +++ + L E D RA L A EE C+R +A S YN A A E ER + + + + L + + SDLLT P A S+ R++ DR+KGM+P+Q+ +I +++E+Q + +R + E R WD Q++ E+++ E + N L++EQ+ HQ+FL++++YTN+P+ YF QF+T+SR Sbjct: 1 MYKVDLPVDESVRQAVERRRAAEAERKSRIFNTRTRVIGVDLRALHKQQGDKQERKEMEKQRDVSYDLLRLSLDEMA-MHQKKEEDEVRGELARDLVQFRAIHQRAEDSRDADINYD----RKGAPT-TCESVPDSALGPASMQVFLGEGIKEDEKKRSQM-ELNEKNLRAQKEEREQRVREEKKRELLTSRVLVEKDLRAVQLNALEEECKREAQVALSHYNQAQAEERMEREQQERMRREGEELAELRYMVTSDLLTERPEAAARTTESSPNAPRVLTDRWKGMSPQQISDIHRKREEQCFEKERLREREKRRELAWDYHLTEQSRQQERDERKDMELQRERRIQLDKYNQQLAREQQAHQQFLDKQLYTNRPSVQYFTQFSTSSR 381
BLAST of RIB43A protein vs. Ensembl Zebrafish
Match: ribc2 (RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]) HSP 1 Score: 97.0561 bits (240), Expect = 8.859e-23 Identity = 67/189 (35.45%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYN 715 IF+ K+R IG+D AL QQ+K+++E+E E N YA D + +D IA +L +RQ D R+LNK + +FR QQ +RRE+DL DP+ LKK + R+ GL GEDL K R + Q+ Q+ W +Q + ERA+ +++ + M + C A CR+ N + Y+ Sbjct: 30 IFSDKVRTIGVDIDALGQQIKERREKEQREANELKVYADDLLCSDGIACILEQRQKKDERQLNKDIVQFRQQFQQASSRREFDLNDPELLKKQEGQRILP-----GLV------GEDLGQKNRLRKQQEQLYSWTTQQKEEVERAKLQRKQEE-------NNMTKSECLWTAELSNCRKWRNKPSETYS 200
BLAST of RIB43A protein vs. Ensembl Xenopus
Match: ribc1 (RIB43A domain with coiled-coils 1 [Source:NCBI gene;Acc:100216275]) HSP 1 Score: 320.087 bits (819), Expect = 2.308e-106 Identity = 193/379 (50.92%), Postives = 253/379 (66.75%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYK+DL D K+ A I RR++E+QRQSRIFN+K R IG+D Q L +QV++ K RE E+ AY A+ + ND IA +L +RQ L K + EFR HQQP TRRE+DLYDP+ALKKD+PARV D+DPRCG AS+QK GEDLN K R K Q W Q+ +++R + + AD LYD KR E+DERA +L+ EE CR+A+++A YN AL E +E RL+ QQE DD I N L D+LT +PA A S++GP R++PDR+KGM+PEQL+ I + QE Q ++ R + +E EWD+QR A+AA+ LE++E+ EL K + N LSKEQK H E+L +EVYTN PTA +F QFNTTSR Sbjct: 1 MYKVDLLPDPKQIAAIERRRNQEQQRQSRIFNAKCRTIGVDVQKLDKQVQELKLRESTEKASNEAYDAERLLNDKIAQMLEQRQEQLAHSLEKDVQEFRDQHQQPHTRREFDLYDPEALKKDQPARVGDEDPRCGPASLQKLAGEDLNEKERKKMQMDLTKKWLSEQIEERQRIQHQAKYADNLYDRKRVELDERALHLSTMEEECRKAISLATKNYNEALGLEASEGKRLRKQQEQDDNFAEIYNHLTGDILTEDPAAASSSYGPHRVIPDRWKGMSPEQLQAIRETQEQQRQEKHRLKEQEKQLEAEWDQQRFLAARAAMTLEQQEQEMNKELRKRLDLYNQQLSKEQKAHLEYLEKEVYTNNPTAHFFTQFNTTSR 379
BLAST of RIB43A protein vs. Ensembl Xenopus
Match: RIBC2 (RIB43A domain with coiled-coils 2 [Source:NCBI gene;Acc:100151719]) HSP 1 Score: 253.447 bits (646), Expect = 2.591e-80 Identity = 169/379 (44.59%), Postives = 249/379 (65.70%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MY+LDLP D++EA+++ +R+ E QR +RIF+S R +G+DK AL Q++DKK +E IE + AYAA +ND IA+ L R D+R+LNK ++EFR Q+ E RRE+DL DP+ALKK+ P RV D DPRC ++ +Q+ GEDL +R + Q+ Q+ +W+ +Q ++ RA + QR D YD R E+D++A L E RRA+ A +N A A E ER +L+ +QE +D I+N + DLL+ +PAQA SAFGP R+VPDR+KGM+ QL+ I Q+ QI++ R + EE +R E RQR+ A+A ++LE++++R+ EL K NL L++ Q+ + +L++EV+TN PT YF QFNT+SR Sbjct: 1 MYRLDLPADRREASLLERKRTAELQRHNRIFSSHTRTVGVDKPALDTQIQDKKLQEEIENKRKEAYAAQMKQNDQIASALDERMQRDVRDLNKAIDEFRLTFQKKEDRREYDLSDPEALKKELPPRVSDGDPRCTVSGVQRLLGEDLTVDSRRQMQQEQLREWSLQQQEEQARALEEQRLRDGNYDKMRVELDQKAAELQQLELQTRRAVCAATKDFNRAQAEETTERKKLERKQEEEDNSVEISNLINGDLLSEDPAQAASAFGPHRVVPDRWKGMSSAQLEAINNVQQQQIQERMRLREEERVREAELYRQRVQAARAMVLLERQQKREEKELRKAQDHMNLQLAQAQRAQKTYLDKEVFTNNPTDRYFEQFNTSSR 379
BLAST of RIB43A protein vs. Ensembl Xenopus
Match: RIBC2 (RIB43A domain with coiled-coils 2 [Source:NCBI gene;Acc:100151719]) HSP 1 Score: 231.491 bits (589), Expect = 3.345e-72 Identity = 131/285 (45.96%), Postives = 188/285 (65.96%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEI 916 MY+LDLP D++EA+++ +R+ E QR +RIF+S R +G+DK AL Q++DKK +E IE + AYAA +ND IA+ L R D+R+LNK ++EFR Q+ E RRE+DL DP+ALKK+ P RV D DPRC ++ +Q+ GEDL +R + Q+ Q+ +W+ +Q ++ RA + QR D YD R E+D++A L E RRA+ A +N A A E ER +L+ +QE +D I+N + DLL+ +PAQA SAFGP R+VPDR+KGM+ QL+ I Sbjct: 1 MYRLDLPADRREASLLERKRTAELQRHNRIFSSHTRTVGVDKPALDTQIQDKKLQEEIENKRKEAYAAQMKQNDQIASALDERMQRDVRDLNKAIDEFRLTFQKKEDRREYDLSDPEALKKELPPRVSDGDPRCTVSGVQRLLGEDLTVDSRRQMQQEQLREWSLQQQEEQARALEEQRLRDGNYDKMRVELDQKAAELQQLELQTRRAVCAATKDFNRAQAEETTERKKLERKQEEEDNSVEISNLINGDLLSEDPAQAASAFGPHRVVPDRWKGMSSAQLEAI 285
BLAST of RIB43A protein vs. Ensembl Mouse
Match: Ribc2 (RIB43A domain with coiled-coils 2 [Source:MGI Symbol;Acc:MGI:1914997]) HSP 1 Score: 207.994 bits (528), Expect = 5.917e-63 Identity = 135/350 (38.57%), Postives = 213/350 (60.86%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 IF+++ R IG D QA QV+D+K +E ++ A+AA+ ND + + R+ ++L + +N+F+ Q+PETRRE+DL DP AL+K+ PAR+ D+D R ++ MQKF GEDLN + R ++QK Q +W +Q ++E+A A+ L+ R + DE A L E + R+ + A +N E+ ER R + QQE +D +T I N L+ DLL+ NP S+FG R+V DR+KGM EQL+EI+ Q+ QI++ R Q EE + +WD +R+ +A A+L+ E++++R + E + + NL L+++Q L ++ +N ++QPT YF QFNT SR Sbjct: 29 IFDARNRIIGGDTQAWDFQVRDQKIKEITDKARHEAFAAEMKHNDKVMCMAHDREQRHRKQLCRAINDFQQNFQKPETRREFDLSDPLALQKELPARISDNDMRNTISGMQKFMGEDLNFQERRRFQKEQSREWFLQQHGEREKARADHLLAEHLHTQTRLKFDETARELMKLEGSTRKEVCAAVKAFNKNQVVELTERKRQEKQQEQEDNMTEITNLLHGDLLSENPRPVASSFGSHRVVLDRWKGMNREQLEEIWFTQKRQIQEKLRLQEEERQHSMDWDLRRIRKAHASLLHERQQQRLLREQRRALDCSNLNLARQQYLQKKQMN-TASSSQPTEDYFSQFNTRSR 377
BLAST of RIB43A protein vs. Ensembl Mouse
Match: Ribc1 (RIB43A domain with coiled-coils 1 [Source:MGI Symbol;Acc:MGI:1913861]) HSP 1 Score: 174.096 bits (440), Expect = 5.849e-50 Identity = 148/380 (38.95%), Postives = 217/380 (57.11%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFR-SLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDL D +E A I RR+RE++RQSR FN + R +G+D +AL QV+++K RE IERN ++AY D +A +L + + + L+K + +FR QQ + E+D +DPD ++ + + D G ASMQ F GEDL + + Q+ Q+ E+Q+ +++ A + + A L D R D RA LA EE+CR AM A + N A A + + R + Q++ + LT + + SDLLT NP A A P R++P +KGM+ EQ I K QE Q ++ K ++ E L EW RQ A+AAL LE++E E + + N L+KEQ+ Q +LN +YTNQPTA Y++QFNT+SR Sbjct: 1 MYKLDLVSDPRELAAIEARRNREKERQSRFFNVRNRVMGVDVEALNYQVEERKFREAIERNKDIAYGTKHAHYDLVAQMLEKEEAERAYRLSKRVQDFREQRQQQYKNGHEFDFWDPDQFQEFRVP-YYEKDAYFGPASMQYFFGEDLERASHVRMQQEQMRYNLEKQLQEQQAAREEEARAALLSDQLRLAADTRAAELARLEESCRAAMRTAMANANKAQAAKQALQQRREQQRQQEANLTEVKKQVTSDLLTENPQVAQRANAPHRVLPYCWKGMSAEQRAAIRKTQETQRQEKKEQRQAEKLVEAEWGRQNKRLAEAALELEEQERELCAEFRRGLGSFNRELAKEQQAQQNYLNSVIYTNQPTAHYYLQFNTSSR 379
BLAST of RIB43A protein vs. Ensembl Mouse
Match: Ribc2 (RIB43A domain with coiled-coils 2 [Source:MGI Symbol;Acc:MGI:1914997]) HSP 1 Score: 117.857 bits (294), Expect = 2.731e-30 Identity = 70/189 (37.04%), Postives = 112/189 (59.26%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYN 715 IF+++ R IG D QA QV+D+K +E ++ A+AA+ ND + + R+ ++L + +N+F+ Q+PETRRE+DL DP AL+K+ PAR+ D+D R ++ MQKF GEDLN + R ++QK Q +W +Q ++E+A A+ L+ R + DE A L E + R+ + A +N Sbjct: 29 IFDARNRIIGGDTQAWDFQVRDQKIKEITDKARHEAFAAEMKHNDKVMCMAHDREQRHRKQLCRAINDFQQNFQKPETRREFDLSDPLALQKELPARISDNDMRNTISGMQKFMGEDLNFQERRRFQKEQSREWFLQQHGEREKARADHLLAEHLHTQTRLKFDETARELMKLEGSTRKEVCAAVKAFN 217
BLAST of RIB43A protein vs. UniProt/SwissProt
Match: sp|Q9H4K1|RIBC2_HUMAN (RIB43A-like with coiled-coils protein 2 OS=Homo sapiens OX=9606 GN=RIBC2 PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 5.571e-73 Identity = 161/374 (43.05%), Postives = 234/374 (62.57%), Query Frame = 2 Query: 77 LPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 LP D ++ A + RR E RQ R+FN++ R IG D +A QV D+K +E E+ +AA+ +ND I +L R+ D + L + +N+F+ Q+PETRRE+DL DP ALKKD PAR D+D R ++ MQKF GEDLN R K+Q+ Q +W+ +Q + + A Q+ A+ LY R + DE A +L E R+A+ + +N + A E ER + + +QE +D L I N L DLL+ NP QA S+FGP R+VPDR+KGMT EQL++I Q+ QI++ R Q E+ R+ +WDR+R+ A+A L+ E+++ R+ +L + + NL L+KEQ L ++++N EVYTNQPT YF QFNT SR Sbjct: 10 LPRDLRQDANLAKRRHAELCRQKRVFNARNRIIGGDTEAWDVQVHDQKIKEATEKARHETFAAEMRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSDNDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETRLQFDETAKHLQKLESTTRKAVCASVKDFNKSQAIESVERKKQEKKQEQEDNLAEITNLLRGDLLSENPQQAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQIQEKLRLQEEKRQRDLDWDRRRIQGARATLLFERQQWRRQRDLRRALDSSNLSLAKEQHLQKKYMN-EVYTNQPTGDYFTQFNTGSR 382
BLAST of RIB43A protein vs. UniProt/SwissProt
Match: sp|Q32LJ7|RIBC2_BOVIN (RIB43A-like with coiled-coils protein 2 OS=Bos taurus OX=9913 GN=RIBC2 PE=2 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.804e-66 Identity = 146/350 (41.71%), Postives = 215/350 (61.43%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 IFN++ R IG D A QV D+ + E+ + A+AA+ +ND IA L R+ D + L K +N+F+ Q+PETRRE+DL DP ALKKD+PAR D D R ++ MQKF GEDLN R K+Q+ Q +W+ +Q ++ + Q+ A+ LY R + DE A +L E A R+A+ ++N A E E+ + +QE +D L I+N L DLL+ NP QA S+FGP R+VPDR+KGM+ EQL+EI Q Q+++ R Q EE R+ +WDR+R+ +A+A L+ E++++R L + + NL L++EQ L ++ + +E+ TN T YF QFNT SR Sbjct: 29 IFNARNRIIGGDTTAWDAQVCDQNIKAATEKARDEAFAAEMRQNDKIACLSENRERRDRKNLCKAINDFQQSFQRPETRREFDLSDPLALKKDRPARQSDYDARNTISGMQKFMGEDLNFHLRKKFQEEQNREWSLQQQKEQMIGRENQKCAEDLYLKTRLQFDETAKHLQNLETATRKAVCATVKEFNKNQALESAEKKIQERKQEQEDNLAEISNMLRGDLLSENPQQAASSFGPHRVVPDRWKGMSQEQLEEIRLVQRQQVQEKLRLQEEERQRDMDWDRRRIQKARATLLFEQQQQRLQRGLRRALDCSNLSLAREQLLQKKHM-KELCTNHATEDYFTQFNTGSR 377
BLAST of RIB43A protein vs. UniProt/SwissProt
Match: sp|Q6AXN9|RIBC2_RAT (RIB43A-like with coiled-coils protein 2 OS=Rattus norvegicus OX=10116 GN=Ribc2 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 1.055e-64 Identity = 139/350 (39.71%), Postives = 213/350 (60.86%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 IF+++ R IG D QA QV+++K +E E+ + +AA+ ND + ++ R+L ++L + +N+F+ Q+PETRRE+DL DP ALKK+ PARV D+D R ++ MQKF GEDLN + R + QK Q +W+ +Q + ERA+ + A+ L+ + DE A +L E R+A+ A ++N E+ ER R QQE +D ++ I N L+ DLL+ NP QA S FGP ++ DR+KGM EQL+EI+ + QI + R Q EE N +WD +R +A A+L+ E++++R + E + + NL L+K+Q L + L+ ++QPT YF QFNT SR Sbjct: 29 IFDARNRIIGGDTQAWDVQVRNQKIKEVTEKARDETFAAEMRHNDKVMCIMHDRELRHRKQLCRAINDFQQRFQKPETRREFDLSDPLALKKELPARVSDNDMRNTISGMQKFMGEDLNFQERKRIQKEQNREWSLQQHGEWERAQAEHKLAEHLHTQTELKFDEAARDLQRLEITTRKAVCAAVKEFNKKQVVELAERKRQVKQQEQEDNMSEITNLLHGDLLSENPQQAASNFGPRHVMLDRWKGMNREQLEEIWSTWKQQIHEKLRLQEEERQHNMDWDLRRTRKAHASLLQERQQQRLLREQRRALDCSNLSLAKQQYLQKRQLD-AAPSSQPTEDYFSQFNTRSR 377
BLAST of RIB43A protein vs. UniProt/SwissProt
Match: sp|Q9D4Q1|RIBC2_MOUSE (RIB43A-like with coiled-coils protein 2 OS=Mus musculus OX=10090 GN=Ribc2 PE=2 SV=3) HSP 1 Score: 207.994 bits (528), Expect = 4.139e-62 Identity = 135/350 (38.57%), Postives = 213/350 (60.86%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 IF+++ R IG D QA QV+D+K +E ++ A+AA+ ND + + R+ ++L + +N+F+ Q+PETRRE+DL DP AL+K+ PAR+ D+D R ++ MQKF GEDLN + R ++QK Q +W +Q ++E+A A+ L+ R + DE A L E + R+ + A +N E+ ER R + QQE +D +T I N L+ DLL+ NP S+FG R+V DR+KGM EQL+EI+ Q+ QI++ R Q EE + +WD +R+ +A A+L+ E++++R + E + + NL L+++Q L ++ +N ++QPT YF QFNT SR Sbjct: 29 IFDARNRIIGGDTQAWDFQVRDQKIKEITDKARHEAFAAEMKHNDKVMCMAHDREQRHRKQLCRAINDFQQNFQKPETRREFDLSDPLALQKELPARISDNDMRNTISGMQKFMGEDLNFQERRRFQKEQSREWFLQQHGEREKARADHLLAEHLHTQTRLKFDETARELMKLEGSTRKEVCAAVKAFNKNQVVELTERKRQEKQQEQEDNMTEITNLLHGDLLSENPRPVASSFGSHRVVLDRWKGMNREQLEEIWFTQKRQIQEKLRLQEEERQHSMDWDLRRIRKAHASLLHERQQQRLLREQRRALDCSNLNLARQQYLQKKQMN-TASSSQPTEDYFSQFNTRSR 377
BLAST of RIB43A protein vs. UniProt/SwissProt
Match: sp|Q4R698|RIBC1_MACFA (RIB43A-like with coiled-coils protein 1 OS=Macaca fascicularis OX=9541 GN=RIBC1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.200e-55 Identity = 155/380 (40.79%), Postives = 214/380 (56.32%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQ-IKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MY ++ D KEAA I RR+RE++RQ+R FN + R +G+D QAL QV D+K RE ER+ E AY ++ D + +L + + D R L K + EFR QQ + RE+ L+DPD + K P + + G AS+Q F GEDL+ R + Q+GQ ERQ ++++A+ + AD L + R MD +A +LA EE+CR AM A + N A A R R + Q+E L I + SDLLT NP A P R++P +KGMTPEQ I KEQE Q K RQ E+ L + EW Q ++ A+A L LE++E + + N L+ EQK Q++LN +YTNQPTA Y QFNT+SR Sbjct: 1 MYNINQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKLREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRRLAKKVQEFREQKQQLKNGREFSLWDPDQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRATRLRMQQGQFRYNLERQQQEQQQAKVDENCADALSNQLRLAMDAQATHLARLEESCRAAMMCAMANANKAQAAVQAGRQRCERQREQKANLAEIRHQSTSDLLTENPQVAQHRTAPHRVLPYCWKGMTPEQRAAIRKEQEVQRSKKEAHRQAEKTL-DTEWKSQTMSSAQALLELEEQERELCAVFQRGLGSFNQQLANEQKAQQDYLNSVIYTNQPTAQYHRQFNTSSR 379
BLAST of RIB43A protein vs. TrEMBL
Match: A0A2T7NT11 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_14772 PE=4 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 9.256e-147 Identity = 245/379 (64.64%), Postives = 294/379 (77.57%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLPVD KEAA I RR EE+R+SRIFN+K R IG+D+QA+ QQ+ DKK++E E+ A+AADA+RND IA +L RRQ +DIR LN+ NEFR+LHQQP RREWDLYDPDALKKDKPARV DDDPRCG +S+QKFDGEDLNNKAR KYQ+ Q W QM +KE+A+Q Q +A+RLY+LK RE+DERAC LA AEE CRRA+ A +N A RE E+ RLK QQE DD +T IAN +Y D+LT NP+ A SA+GP R++PDR+KGMTP QL++I K QE Q +N+R + EEDLRNKEWDRQR+A A+AAL+LE+ ERK EL K ADEN LS EQ HQEFL++EVYTN PTAAYFMQFNTT+R Sbjct: 1 MYKLDLPVDYKEAAAIERRRQMEEERKSRIFNAKTRIIGVDRQAIDQQMFDKKQQEEFEQKRHEAFAADAVRNDLIAQMLERRQAEDIRALNRAENEFRALHQQPSCRREWDLYDPDALKKDKPARVHDDDPRCGTSSLQKFDGEDLNNKARTKYQQEQARQWLMEQMIEKEQAKQNQNKANRLYELKMRELDERACQLAKAEEECRRAIEAARKDFNAAQDRERKEKERLKKQQELDDNMTEIANHIYGDILTENPSVAHSAWGPHRVIPDRWKGMTPSQLEDIRKAQERQRLENERLRQEEDLRNKEWDRQRVANARAALLLERATERKRRELEKQQADENRRLSHEQHAHQEFLDKEVYTNPPTAAYFMQFNTTTR 379
BLAST of RIB43A protein vs. TrEMBL
Match: A0A2C9JD92 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106054123 PE=4 SV=1) HSP 1 Score: 428.328 bits (1100), Expect = 1.284e-145 Identity = 239/379 (63.06%), Postives = 298/379 (78.63%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLPVD K+AA I RR+ EE+R++RIFN+K+RQIGIDKQA+ QQ+ D+K+ E ER A+AADA+RND IA LL +RQ DIR LN+ LNEFR+LHQQP RREWDLYDPD LKKDKPARV DDDPRCG+AS+QKFDGEDLN+KAR K Q Q W+E QM ++ERA + Q EADRLY+LK+RE+DERA L AEE CR+A+++A + YN AL E ER RLK QQE DD +T IAN ++ D+LT NPA A SAFGP R++PDR+KGM+P+QL+EI KEQ Q+ + +R + EE+LRN+E+DRQ A A+AAL++EKE ERK E+ K ADEN L++EQK H +FLN+EVYTN PT+AYFMQFNT++R Sbjct: 1 MYKLDLPVDYKQAAAIERRRAMEEERKTRIFNAKVRQIGIDKQAIDQQIFDRKQMEDYERKRHEAFAADALRNDRIAVLLEKRQEQDIRALNEALNEFRALHQQPNQRREWDLYDPDGLKKDKPARVHDDDPRCGVASIQKFDGEDLNSKARKKLQNEQSRKWHEAQMRERERARRNQEEADRLYELKQRELDERAIQLQQAEEECRKAIDMATASYNDALKNEQRERERLKRQQEQDDNMTEIANHVFGDILTENPAVAQSAFGPHRVIPDRWKGMSPQQLEEIRKEQARQMAEAERLRQEEELRNREYDRQASANARAALLIEKELERKRKEIEKAQADENRRLAQEQKAHIDFLNKEVYTNSPTSAYFMQFNTSTR 379
BLAST of RIB43A protein vs. TrEMBL
Match: A0A504YEC3 (RIB43A domain with coiled coils 1 OS=Fasciola gigantica OX=46835 GN=FGIG_09494 PE=4 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 1.114e-143 Identity = 229/379 (60.42%), Postives = 305/379 (80.47%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLP+D KEAAII+ RR RE+ RQSRIFN+++RQIG+D++AL QQ ++++++E +E+ ELAYA+DA+RND I +L RQ D RE+N+ LN FRSLHQQPE+RRE+DLYDP+ALKKD+PARV DDDPRCG++S+QKFDGEDLN +AR +YQ+ Q+ +W ERQ+ ++ RAE+ Q+EA+RL LKRRE+D+RAC LA AEE CRRA+N+A ++N AL E +R K +QE DD +T I NA+Y D+LT NPAQAISA GP R+VPDRFKGM+ EQL EI +EQ++Q+++ +R + EE LR++EWD+QR+ AK L+LE+E ER E+SK +ADENL L+++QK +++L+ EVYTNQPTA YF QFNTTSR Sbjct: 1 MYKLDLPIDHKEAAIIDARRKREQARQSRIFNARVRQIGVDEEALKQQAEERRKKELLEKERELAYASDAIRNDKIVCILQARQERDQREINQALNTFRSLHQQPESRREFDLYDPEALKKDRPARVSDDDPRCGVSSLQKFDGEDLNQQARCQYQREQMQNWFERQIEERRRAEEVQKEAERLNALKRRELDQRACELAKAEEDCRRAINMAVQRFNDALRVEQEQRRLQKAKQEQDDNMTEICNAIYGDMLTENPAQAISALGPNRVVPDRFKGMSKEQLAEIHREQQEQMREKERLRAEEKLRDEEWDQQRVKSAKLGLLLEREIERSSKEISKRLADENLKLAEDQKAFRDYLDHEVYTNQPTADYFTQFNTTSR 379
BLAST of RIB43A protein vs. TrEMBL
Match: A0A5K4F881 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 9.659e-142 Identity = 230/379 (60.69%), Postives = 296/379 (78.10%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLP+D KEAA I RR RE++RQ RIF+S+IRQIGID +AL QV++KK RE +E+ +L YAADA RND IA LL +RQ DD REL K LNEFRS+HQQPE+RRE+DLYDP+A K D+PARV DDDPRCG+AS+QKFDGEDLN KAR KYQ+ Q+ +W +RQ+ ++ RAE A++EADRLYDLKRRE+D+RAC L AEE CRRA+N+A +YN L E +++A LK +Q DD +T I NA+Y D L+ NPAQAISAFG RI+P+R+KGMT EQ+K+I K QE+QIK+ +R+ E ++EWD Q L A+ L++E+E ER E+++ VA++NL L++EQK Q++LN+E+YTNQPT YF QFNTTSR Sbjct: 1 MYKLDLPIDTKEAAAIELRRRREKERQERIFDSRIRQIGIDDEALKHQVEEKKLRELVEKQRDLVYAADAARNDRIACLLEKRQHDDERELAKNLNEFRSIHQQPESRREFDLYDPNAFKLDRPARVSDDDPRCGVASLQKFDGEDLNLKARMKYQREQLQNWFDRQIEERNRAENAKKEADRLYDLKRRELDQRACELQKAEEECRRAINVAMQRYNKLLKEESDQKALLKAKQTEDDNMTEICNAIYGDFLSENPAQAISAFGINRIIPERYKGMTLEQIKDIRKYQEEQIKEKQRQLAREKQGDEEWDNQILKSARLGLLIEREIERSTREINRKVAEKNLQLAQEQKSFQDYLNKELYTNQPTGQYFTQFNTTSR 379
BLAST of RIB43A protein vs. TrEMBL
Match: A0A1S3JND9 (RIB43A-like with coiled-coils protein 2 OS=Lingula unguis OX=7574 GN=LOC106174590 PE=4 SV=1) HSP 1 Score: 417.927 bits (1073), Expect = 1.465e-141 Identity = 230/378 (60.85%), Postives = 295/378 (78.04%), Query Frame = 2 Query: 65 YKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 YKLDLP+D KEAA I RR+ EE+R+SRIFN+K+R IGID+QA+ QQV+D+KE E +ER A+AADA+R D IA LL +RQ DIR+LN LNEFR LHQQP RREWDLYDPD+LKKDKPARV DDDPRCG++ +QKFDGEDLNNKAR KYQ+ Q+ +W+ERQ ++E+AE+ QR+ADRLY+LK RE+DERA L AEEACRRA+N A +N ALA E E+ RL QQE DD T +AN +Y D+LT NPA A SA+GP R++ DR+KGM+P+QL +I K Q+ Q K+N+R + EEDLRNKEWD R+A A+A +++E+E +R+ E+ K A+EN L+ EQK +++L +EVYTN PTA+YFMQFNT++R Sbjct: 3 YKLDLPIDLKEAASIERRRNMEEERKSRIFNAKVRLIGIDRQAVEQQVRDRKEMEEMERRRHEAFAADAVRCDRIAELLTKRQEHDIRQLNHALNEFRQLHQQPSNRREWDLYDPDSLKKDKPARVSDDDPRCGISGLQKFDGEDLNNKARTKYQQEQLREWSERQKKEREQAEENQRKADRLYELKMRELDERAMELQKAEEACRRAINHAQKDFNHALAAEQAEKRRLNKQQEEDDNATELANHIYGDVLTENPAVAQSAWGPHRVITDRWKGMSPKQLDDIKKTQDRQRKENERLRQEEDLRNKEWDAHRVAHARAGMLIERELDRQKKEILKQQAEENRRLASEQKASKDYLYKEVYTNPPTASYFMQFNTSTR 380
BLAST of RIB43A protein vs. Ensembl Cavefish
Match: ribc2 (RIB43A domain with coiled-coils 2 [Source:NCBI gene;Acc:103029086]) HSP 1 Score: 158.303 bits (399), Expect = 3.040e-44 Identity = 141/379 (37.20%), Postives = 219/379 (57.78%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 M + LP D+ AA ++ R++RE R+ R+FN+K+R IG+DK+AL QVK+++++E E YA +R+D A +L RQ D R L + + +FRS Q P +RRE+DL D + LKK R+ GLA GEDL ++ R + Q Q+ DW+ +Q + E+ E+ Q++ D YD R +D RA L EE +RA IA +NLALA E +E+ + ++E ++ I N L +LL + Q+ G R+ D +KGMTP+QL Q+ Q +D +R ++E+ + + DR+RLA A+AAL+LE+++ R EL + + + N L++ Q ++ L +EV+ N P YF QFNT+SR Sbjct: 1 MNPVQLPSDRLSAAHLDQRQTRELLRKERVFNAKLRTIGVDKEALELQVKERRDKEQAEARALKEYADKLIRSDQTACVLEHRQKKDERLLEEAIVQFRSRFQHPSSRREFDLNDSEFLKKQDGVRIL-----PGLA------GEDLASRDRAQRQSEQLRDWSIQQQQELEQTEEQQKQEDLQYDQSRVALDSRAVELQKMEEEHKRANTIAIKNFNLALAAERSEQRERQRREEEENNQVEILNQLQGELLNESIEQSSRVPGRPRLRRDCYKGMTPQQLLHYSNYQKQQAEDRRRVRLEQQEEDLQQDRERLASARAALLLERQQARISKELRRSLDNTNALLAQAQHAQRKHLEKEVFINVPNERYFSQFNTSSR 368
BLAST of RIB43A protein vs. Ensembl Cavefish
Match: ribc1 (RIB43A domain with coiled-coils 1 [Source:NCBI gene;Acc:103021611]) HSP 1 Score: 155.992 bits (393), Expect = 3.007e-43 Identity = 125/388 (32.22%), Postives = 213/388 (54.90%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNER----QMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAI-----SAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 M+KLD+PVD + + RR+ E R RIF+++ R IG+D L QQV +++ RE +E+ +L + D + + + REL + L ++R+L Q+PE R+ D+ + + P+ + G ASMQ F GE + + + ++Q + NER Q +++R E+ ++ D L D++ + + L A EE C+RA +A YN A E ER R + ++ + + + + + SDLLT +P A SA P R++PDR+KGM+P+QL I++++E+Q + + ++ E R W Q+L +A+ + E+ E + N L++EQ++HQ++LN+++YTN+PTA YF QFNT+SR Sbjct: 1 MFKLDMPVDSRVVQAVERRRAAEAARHERIFSTRSRVIGVDMIVLEQQVAERRNREEVEKQQDLELDTLRVSIDHMVLEQVKEEEQRRRELAQELQQYRALCQRPEDSRDADI---NYKHQGAPSVYLPSEESLGPASMQVFQGEGIGEEEKKRFQM----ELNERTFRAQREERDRQEKEKKHKDMLRDMELMQRNLIDVQLDALEEECKRAARMALKSYNQAQVDERRERERQEKLRQEGEGMKEVWHMVTSDLLTESPEAAAREGERSAEAP-RVLPDRWKGMSPKQLSAIYRQREEQRAEKEAQRQLEKHRELAWGLQQLEEAREQVEEERRLREMERERRLQLDKYNQQLAQEQQIHQQYLNKQIYTNRPTARYFSQFNTSSR 380
BLAST of RIB43A protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000123.1 (pep scaffold:Pmarinus_7.0:GL480403:15296:26482:1 gene:ENSPMAG00000000109.1 transcript:ENSPMAT00000000123.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 66.6254 bits (161), Expect = 2.107e-13 Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQR 598 IFN K+R IG+D L +QV+ ++ RE E+ E A+A A+R+D IA LL RQ ++ R L++ L ++ + Q R + P + V D+ GL S F GEDL R QK Q W Q +K RA+ +R Sbjct: 26 IFNPKVRTIGVDLDGLNEQVEQRRFREQQEKTREEAFADAAIRHDRIAILLDERQREESRALDRSLAQYWARCQSASDRSQ----PPAGVVGGDSDVVADEGAVSGLRS---FAGEDLEAGERRGLQKEQQRRWLLEQQEEKRRAQDERR 168
BLAST of RIB43A protein vs. Ensembl Nematostella
Match: EDO49672 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFW4]) HSP 1 Score: 346.28 bits (887), Expect = 2.948e-117 Identity = 217/379 (57.26%), Postives = 274/379 (72.30%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLPVD KE A I RR+RE QRQSRIFN+++R IGID QAL QV D+K +E E+ A+AAD RND I L+ +RQ DIRELNK +N FR HQ+PE REW+L DPD LKKDKPARV DDDPRCG++S+QKF GEDLN+K+R K Q+ Q+ +W ++Q +K + + Q AD LYDLK RE+D+RAC LA AE CRRA+N A +NLAL +E + L+ QQE DD +T I+N ++ D+LT NP A SAFG R++ DR+KGM+P QL EI Q+ Q+K+ +R + EE+ R KE+ R L QAKA +++E+E ERK +L K A ENL LS EQK HQE++N+EVYTN PTAAYFMQFNTTSR Sbjct: 1 MYKLDLPVDMKETAAIERRRNRELQRQSRIFNARVRTIGIDLQALETQVADRKRQEVEEQRRHNAFAADMKRNDMICALMQQRQEHDIRELNKEVNTFRQEHQRPEDTREWELNDPDCLKKDKPARVSDDDPRCGISSLQKFVGEDLNSKSRRKLQEEQMREWVKQQSNEKNQDKANQSYADYLYDLKARELDQRACELAQAESDCRRAINQATKDFNLALMKERQAKEDLEKQQELDDNMTEISNHVFGDMLTENPDVAQSAFGGHRVITDRWKGMSPAQLAEIRYIQQQQLKEKERLKQEEEEREKEYQRLLLTQAKAGILMERELERKRKQLEKDQAQENLRLSAEQKSHQEYVNKEVYTNPPTAAYFMQFNTTSR 379
BLAST of RIB43A protein vs. Ensembl Nematostella
Match: EDO27826 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T868]) HSP 1 Score: 154.451 bits (389), Expect = 6.977e-46 Identity = 89/140 (63.57%), Postives = 105/140 (75.00%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQ 481 MYKLDLPVD KE A I RR+RE QRQSRIFN+++R IGID QAL QV D+K +E E+ A+AAD RND I L+ +RQ DIRELNK +N FR HQ+PE REW+L DPD LKKDKPARV DDDPRCG++S+Q Sbjct: 1 MYKLDLPVDMKETAAIERRRNRELQRQSRIFNARVRTIGIDLQALETQVADRKRQEVEEQRRHNAFAADMKRNDMICALMQQRQEHDIRELNKEVNTFRQEHQRPEDTREWELNDPDCLKKDKPARVSDDDPRCGISSLQ 140
BLAST of RIB43A protein vs. Ensembl Medaka
Match: ribc1 (RIB43A domain with coiled-coils 1 [Source:NCBI gene;Acc:101166625]) HSP 1 Score: 114.775 bits (286), Expect = 3.885e-28 Identity = 119/393 (30.28%), Postives = 206/393 (52.42%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGR--RQLDDIRELNKILNEFRSLHQQPET---------RREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLT--ANPAQA-ISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 M+K D DQ + RRS E R++RIFN+++R +G+D AL QQVK+K ++E +E+ + A + ++ LL + + + R L K L + + Q+ +T + +D+ P+A + G ASMQ+F GED N K + Q + QM + R ++ + D L + ++ + AA EE R+A IA +N A A E E + ++++E + L + + + SD+LT A+ + + P +I+PDR+KG+ PEQL+ +++E Q + +R+ +++ W+ ++L ++ A E+ + KM EL + N+ L++EQ HQE+LN+++YTN+PT YF QFNT+SR Sbjct: 1 MFKGDARQDQSLTKAVEGRRSAEAARKARIFNTRLRVMGLDLDALNQQVKEKLQQENLEKLQ--SNALETLKKSQDEALLQQDNNEKEKRRALQKDLTHYWATQQRLDTQNAGLQNGLKGAFDITTPEA--------------KLGPASMQRFQGEDANWKQMRREQIRMTERALKGQMDENIRRQERENHKDMLEKQELLHQNQEQLHKAAMEEERRKAARIALHSFNQAQAAERAESLKEQHRREETENLAEMWHTMTSDMLTECADAGERDVGGGKPPQILPDRWKGIRPEQLRSFQRDREQQCQQKQRQCDAGKIQDAAWNLEQLTLSRKAEEEERRKAEKMRELRIQMDQYNMQLAREQSAHQEYLNKKLYTNKPTKDYFYQFNTSSR 377
BLAST of RIB43A protein vs. Ensembl Medaka
Match: ribc2 (RIB43A-like with coiled-coils protein 2 [Source:NCBI gene;Acc:101155347]) HSP 1 Score: 100.908 bits (250), Expect = 2.863e-23 Identity = 105/352 (29.83%), Postives = 174/352 (49.43%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQEND-DTLTAIANALYSDLLTANPAQAISAFGPGRIV-PDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 +F+ K+R +G+D + L QV++KK +E + + A+ AD + A +L RQ L K L FRS +QQP+TRRE+DL DPD+ KK D + L + GED +R + QK Q+ +W +Q A+ + + Q E ++ ++ R E RA + R+ +A YNLA+ + E+ R K Q + D D TA A+ F P V P PE ++++ + Q+ QI++ KR +ME+ ++ +R RL A+AAL++E+ + R +L + + N L++ K + + R Q ++F++FNT SR Sbjct: 29 VFDDKLRTMGVDTEVLDAQVQEKKRQEGKAKQEQAAFDADVLHQSKAAAVLQNRQTKQKLALQKALETFRSQNQQPQTRREFDLNDPDSWKK-----TDQSDAQMILPGL---VGEDPTKSSREQRQKEQLREWLIQQQAELDASRSQQEEEEQRHNRSREETLNRAGEHLHLQAERRKEAAVATQNYNLAM---IEEKHRRKQQNDPDYDQETA----------------AVPGFSPSADVRP------PPETVQQVIQFQKYQIQEKKRIEMEKKQEDERHERVRLDSARAALLMERRQARLGKQLRQQLDSANGQLAQTHKQQKPDIER----GQIDESFFLKFNTCSR 343
BLAST of RIB43A protein vs. Ensembl Medaka
Match: ribc2 (RIB43A-like with coiled-coils protein 2 [Source:NCBI gene;Acc:101155347]) HSP 1 Score: 63.1586 bits (152), Expect = 1.177e-10 Identity = 61/215 (28.37%), Postives = 99/215 (46.05%), Query Frame = 2 Query: 149 IFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAY---AADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMA--DKERAEQAQREADRLYDLKRRE--MDERACNLAAAEEACRRAMNIANSQY------NLALAREMNERARL 754 +F+ K+R +G+ A + R++ L Y AD + A +L RQ L K L FRS +QQP+TRRE+DL DPD+ KK + P GL GED +R + QK Q+ +W +Q A D R ++ R+ L +R+E + + NLA + C+ + ++ Y ++ L R + E +++ Sbjct: 30 VFDDKLRTMGVSFPASGR-----------TRHLRLLYEQSYADVLHQSKAAAVLQNRQTKQKLALQKALETFRSQNQQPQTRREFDLNDPDSWKKTDQSDAQMILP--GLV------GEDPTKSSREQRQKEQLREWLIQQQAELDASRKQRHNRKHLHLQAERRKEAAVATQNYNLAMVNKKCQDFVQVSTCFYLVNFCFSIRLKRNIGESSKM 225
BLAST of RIB43A protein vs. Planmine SMEST
Match: SMESG000071493.1 (SMESG000071493.1) HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0 Identity = 378/379 (99.74%), Postives = 378/379 (99.74%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLPVDQKEAAIINNRRSREEQRQSRIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLT NPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRLAQAKAALVLEKEEERKMLELSKHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR Sbjct: 1 MYKLDLPVDQKEAAIINNRRSREEQRQSRIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTENPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQIKDNKRRQMEEDLRNKEWDRQRLAQAKAALVLEKEEERKMLELSKHVADENLCLSKEQKLHQEFLNREVYTNQPTAAYFMQFNTTSR 379
BLAST of RIB43A protein vs. Planmine SMEST
Match: SMESG000037028.1 (SMESG000037028.1) HSP 1 Score: 375.941 bits (964), Expect = 1.424e-128 Identity = 220/387 (56.85%), Postives = 288/387 (74.42%), Query Frame = 2 Query: 62 MYKLDLPVDQKEAAXXXXXXXXXXXXXXXIFNSKIRQIGIDKQALAQQVKDKKERECIERNVELAYAADAMRNDSIATLLGRRQLDDIRELNKILNEFRSLHQQPETRREWDLYDPDALKKDKPARVCDDDPRCGLASMQKFDGEDLNNKARNKYQKGQVNDWNERQMADKERAEQAQREADRLYDLKRREMDERACNLAAAEEACRRAMNIANSQYNLALAREMNERARLKNQQENDDTLTAIANALYSDLLTANPAQAISAFGPGRIVPDRFKGMTPEQLKEIFKEQEDQ-----IKDNKRRQMEEDLRNKEWDRQRXXXXXXXXXXXXXXXXXXXXXXXHVADENLCLSKEQKLHQE---FLNREVYTNQPTAAYFMQFNTTSR 1198 MYKLDLPVD KEA I RR +EE R+SRIFNSKIRQIG+D AL QQ+ +K+ +E ++ + YAA A+R D I L+ +RQLDD++ELNK LNEFR LHQ+PE RRE+DLYDP+ LKKDKPARV DDDPRCG++S+QKFDGEDLN K RN Q+ Q+ W E QM +K+ A +A + A RL+DLK+ E+D+RAC+L +EE CR+A+N+A S YN AL +E + RLK+QQE DD T I+NAL SDLLT NP Q++SAFG RI+PDRFKGM+ EQL++I Q+ Q ++ K RQ+ +DL +D+QR+AQA++ L++E+E R+ ++ K +A+EN+ LSK+ HQE +LN+EVYTNQPTA YFMQFNT SR Sbjct: 1 MYKLDLPVDLKEANQIEQRRIKEESRKSRIFNSKIRQIGVDTNALDQQINEKRSKEKLQNEFDHLYAAAAIRMDKICQLMEKRQLDDLKELNKALNEFRQLHQRPEQRREFDLYDPNGLKKDKPARVSDDDPRCGISSIQKFDGEDLNGKGRNAVQRDQMKRWLELQMNEKQNALEAGKRAQRLHDLKQIELDQRACDLLQSEEDCRKAINLALSNYNEALRQERIVKERLKHQQEEDDRKTHISNALMSDLLTENPNQSMSAFGSHRIIPDRFKGMSKEQLQQILDTQQRQRMEKMLELEKERQL-KDL----FDKQRIAQARSGLLIEREISRQKNQIDKQLAEENIKLSKD---HQEIINYLNKEVYTNQPTADYFMQFNTCSR 379 The following BLAST results are available for this feature:
BLAST of RIB43A protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of RIB43A protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of RIB43A protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of RIB43A protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of RIB43A protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of RIB43A protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of RIB43A protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of RIB43A protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of RIB43A protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of RIB43A protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of RIB43A protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of RIB43A protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of RIB43A protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of RIB43A protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30004949 ID=SMED30004949|Name=RIB43A protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1226bpback to top protein sequence of SMED30004949-orf-1 >SMED30004949-orf-1 ID=SMED30004949-orf-1|Name=SMED30004949-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=380bp MYKLDLPVDQKEAAIINNRRSREEQRQSRIFNSKIRQIGIDKQALAQQVKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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