Polypyrimidine tract binding protein 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30004929 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 291.967 bits (746), Expect = 8.068e-91 Identity = 183/541 (33.83%), Postives = 285/541 (52.68%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + L + P L + + G T +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 39 ANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNT--VLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 533
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 291.582 bits (745), Expect = 1.104e-90 Identity = 180/523 (34.42%), Postives = 277/523 (52.96%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + L + P L + + G T +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNT--VLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRD-HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 534
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 291.197 bits (744), Expect = 1.291e-90 Identity = 180/543 (33.15%), Postives = 287/543 (52.85%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + ++ L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 39 ANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDV-LHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 291.197 bits (744), Expect = 1.414e-90 Identity = 178/525 (33.90%), Postives = 279/525 (53.14%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRD-HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 529
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 288.115 bits (736), Expect = 2.762e-89 Identity = 183/530 (34.53%), Postives = 279/530 (52.64%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE-------NAVSTTN--------QICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSKQYL 1652 PS+V+H+R LP DVTE E+ S+ PFG ++ +++ + QA +EM T+E A TM YY +P LR + +IQ+S+H L+ TDSS + N+V + N + MA PVLR++V++ + ++ L +IF +G + +I+ + Q +QY++P SA+ AK +G ++ CC LR++FS SL++ +D RD+ R P P G P + AA A P A+P ++ P + G L + + G S +L+VSNLN ++ P +LF LFG YGDV RVKI++N+K AL+Q A AQ A+ LNG L+GKP+ + SKH + + P G E++ L ++Y +S LHRFK+ S+N NI+ PS LH++ + VSEED++ LF+ N VK + F +KMAL+++ SVE A++ALI+LH++DL G N LRVSFSK + Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDV-LHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTR-PDLPS---------GDSQPSLDQTMA---------------AAFASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNV--QLPREGQEDQG----LTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKD-RKMALIQMGSVEEAVQALIDLHNHDL-GENHHLRVSFSKSTI 550
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 227.639 bits (579), Expect = 3.101e-66 Identity = 160/515 (31.07%), Postives = 260/515 (50.49%), Query Frame = 3 Query: 108 EIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERF-RDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGF-LDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 IP SKV+HVR++P D+ ++E+ + +G +S ++ + QA +E E + A +R + F QYS H L+ + + E+ + + + ++Q VLR ++++ ++ L+++F YG + RI+ + Q +Q SE SA++AK V+ CC LR+++S +L++ +D RD+ +P P + I IP + F +P T Q + AA + ++AP + L S +L P S N +P+++VSNL+E K+ DALF LFG YGDV RVKI+YN+K+ ALIQ++ + AQ AL L+ V + + + V SKH + + P G + L R+Y S LHRFK+ S+N+ NIY P LH++ + VSEE ++ +F + F VK + F KMAL +L +E+AI+ALI +H++ L ++LRVSFSK Sbjct: 116 SIPVSKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKAISDTESVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT-NPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAAALAPYLNPLGLTSANLAPSISSMRFPMINL---------TPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNV--QMPKEGQPDAG----LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSK 612
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 195.667 bits (496), Expect = 8.737e-56 Identity = 134/406 (33.00%), Postives = 210/406 (51.72%), Query Frame = 3 Query: 435 KEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERF-RDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGF-LDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 ++Q VLR ++++ ++ L+++F YG + RI+ + Q +Q SE SA++AK V+ CC LR+++S +L++ +D RD+ +P P + I IP + F +P T Q + AA + ++AP + L S +L P S N +P+++VSNL+E K+ DALF LFG YGDV RVKI+YN+K+ ALIQ++ + AQ AL L+ V + + + V SKH + + P G + L R+Y S LHRFK+ S+N+ NIY P LH++ + VSEE ++ +F + F VK + F KMAL +L +E+AI+ALI +H++ L ++LRVSFSK Sbjct: 63 QQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT-NPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAAALAPYLNPLGLTSANLAPSISSMRFPMINL---------TPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNV--QMPKEGQPDAG----LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSK 450
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 195.667 bits (496), Expect = 8.737e-56 Identity = 134/406 (33.00%), Postives = 210/406 (51.72%), Query Frame = 3 Query: 435 KEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERF-RDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGF-LDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 ++Q VLR ++++ ++ L+++F YG + RI+ + Q +Q SE SA++AK V+ CC LR+++S +L++ +D RD+ +P P + I IP + F +P T Q + AA + ++AP + L S +L P S N +P+++VSNL+E K+ DALF LFG YGDV RVKI+YN+K+ ALIQ++ + AQ AL L+ V + + + V SKH + + P G + L R+Y S LHRFK+ S+N+ NIY P LH++ + VSEE ++ +F + F VK + F KMAL +L +E+AI+ALI +H++ L ++LRVSFSK Sbjct: 63 QQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT-NPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAAALAPYLNPLGLTSANLAPSISSMRFPMINL---------TPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNV--QMPKEGQPDAG----LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSK 450
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 106.301 bits (264), Expect = 6.712e-24 Identity = 123/513 (23.98%), Postives = 199/513 (38.79%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLH-LFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLR--SIAPAIRGFLD--------------SQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISH-RAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLH---VAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMA--LVELSSVESAIEAL 1586 PS V+HVR+L VTE ++ + FG ++Y + AL+E E E A+ + + ++ + YS T+Q + M E A P LVV N + + +++I G + R+ + +VQ +++ AK AK NG ++ CC L+V F+ + + R+D RDF +P + E F+D TL +P + + DD R AP+ G+ P R D D G ++++ L KI+ D LF + YG+V R+ M + T +I+ T E Q L FL G L+G L S + + H R P + G ++Y+ S+ RF + + I P+ LH G +D+ + D+ A T++K KI +F S ++ A E +VE A E L Sbjct: 30 PSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYS----------------------TSQCIERMGFESATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFT-------------------LP-DNESFQDTGR--------KTLIPAKPDDHYRRPYEDDRNHYDRHDYQAPSSYGYSSRGGGHSDYYGGDRGGPPHPPPSRYRDDYEDRGYAQPAGGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPD----GSPSFKDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHK--PVKIDIFPSRNERSAAGTAEFETVEIANEVL 486
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 106.301 bits (264), Expect = 6.712e-24 Identity = 123/513 (23.98%), Postives = 199/513 (38.79%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLH-LFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLR--SIAPAIRGFLD--------------SQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISH-RAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLH---VAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMA--LVELSSVESAIEAL 1586 PS V+HVR+L VTE ++ + FG ++Y + AL+E E E A+ + + ++ + YS T+Q + M E A P LVV N + + +++I G + R+ + +VQ +++ AK AK NG ++ CC L+V F+ + + R+D RDF +P + E F+D TL +P + + DD R AP+ G+ P R D D G ++++ L KI+ D LF + YG+V R+ M + T +I+ T E Q L FL G L+G L S + + H R P + G ++Y+ S+ RF + + I P+ LH G +D+ + D+ A T++K KI +F S ++ A E +VE A E L Sbjct: 30 PSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYS----------------------TSQCIERMGFESATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFT-------------------LP-DNESFQDTGR--------KTLIPAKPDDHYRRPYEDDRNHYDRHDYQAPSSYGYSSRGGGHSDYYGGDRGGPPHPPPSRYRDDYEDRGYAQPAGGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPD----GSPSFKDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHK--PVKIDIFPSRNERSAAGTAEFETVEIANEVL 486
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0112865) HSP 1 Score: 259.61 bits (662), Expect = 1.584e-78 Identity = 175/570 (30.70%), Postives = 280/570 (49.12%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQS----------TDSSMHPEAENA------------------------------VSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETE------RFRDIREFRELRDPIDTLAALQP----LLTHAATHPDDAMP-----------LLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 SKV+H+R++P++ E ++ ++ PFG ++ +++ + QA +EM + A +M Y P +R + ++Q+S+H L++ +D S+ A + S N ++ A VLR++V+ + ++ L +IFQ YG + +IV + Q IQY + SA+ AK+L +G ++ CC LR++ S +L++ +D RDF + P E + GG+ + R R ++ + + L P L T ++A+P L++ APA+RG+ S +L+VSNLNE + PDALF LFG YGDV RVKI+YN+K++ALIQ A + A A+ L+ + L+GKP+ V SKH + + P G + L R+Y+ + LHRFK+ S+N+ NIY PS LH++ + SE+DI+ FT N F VK + F +KMAL++L SVE A+ ALI++H++ L SN LRVSFSK Sbjct: 33 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDI-LHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGY-----------------------------SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAV--QLPKEGQPDAG----LTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSK 565
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300268) HSP 1 Score: 259.225 bits (661), Expect = 2.922e-78 Identity = 175/570 (30.70%), Postives = 280/570 (49.12%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQS----------TDSSMHPEAENA------------------------------VSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETE------RFRDIREFRELRDPIDTLAALQP----LLTHAATHPDDAMP-----------LLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 SKV+H+R++P++ E ++ ++ PFG ++ +++ + QA +EM + A +M Y P +R + ++Q+S+H L++ +D S+ A + S N ++ A VLR++V+ + ++ L +IFQ YG + +IV + Q IQY + SA+ AK+L +G ++ CC LR++ S +L++ +D RDF + P E + GG+ + R R ++ + + L P L T ++A+P L++ APA+RG+ S +L+VSNLNE + PDALF LFG YGDV RVKI+YN+K++ALIQ A + A A+ L+ + L+GKP+ V SKH + + P G + L R+Y+ + LHRFK+ S+N+ NIY PS LH++ + SE+DI+ FT N F VK + F +KMAL++L SVE A+ ALI++H++ L SN LRVSFSK Sbjct: 46 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDI-LHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGY-----------------------------SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAV--QLPKEGQPDAG----LTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSK 578
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300269) HSP 1 Score: 259.225 bits (661), Expect = 2.922e-78 Identity = 175/570 (30.70%), Postives = 280/570 (49.12%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQS----------TDSSMHPEAENA------------------------------VSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETE------RFRDIREFRELRDPIDTLAALQP----LLTHAATHPDDAMP-----------LLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 SKV+H+R++P++ E ++ ++ PFG ++ +++ + QA +EM + A +M Y P +R + ++Q+S+H L++ +D S+ A + S N ++ A VLR++V+ + ++ L +IFQ YG + +IV + Q IQY + SA+ AK+L +G ++ CC LR++ S +L++ +D RDF + P E + GG+ + R R ++ + + L P L T ++A+P L++ APA+RG+ S +L+VSNLNE + PDALF LFG YGDV RVKI+YN+K++ALIQ A + A A+ L+ + L+GKP+ V SKH + + P G + L R+Y+ + LHRFK+ S+N+ NIY PS LH++ + SE+DI+ FT N F VK + F +KMAL++L SVE A+ ALI++H++ L SN LRVSFSK Sbjct: 46 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDI-LHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGY-----------------------------SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAV--QLPKEGQPDAG----LTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSK 578
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300267) HSP 1 Score: 259.225 bits (661), Expect = 2.922e-78 Identity = 175/570 (30.70%), Postives = 280/570 (49.12%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQS----------TDSSMHPEAENA------------------------------VSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETE------RFRDIREFRELRDPIDTLAALQP----LLTHAATHPDDAMP-----------LLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 SKV+H+R++P++ E ++ ++ PFG ++ +++ + QA +EM + A +M Y P +R + ++Q+S+H L++ +D S+ A + S N ++ A VLR++V+ + ++ L +IFQ YG + +IV + Q IQY + SA+ AK+L +G ++ CC LR++ S +L++ +D RDF + P E + GG+ + R R ++ + + L P L T ++A+P L++ APA+RG+ S +L+VSNLNE + PDALF LFG YGDV RVKI+YN+K++ALIQ A + A A+ L+ + L+GKP+ V SKH + + P G + L R+Y+ + LHRFK+ S+N+ NIY PS LH++ + SE+DI+ FT N F VK + F +KMAL++L SVE A+ ALI++H++ L SN LRVSFSK Sbjct: 46 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDI-LHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGY-----------------------------SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAV--QLPKEGQPDAG----LTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSK 578
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0085880) HSP 1 Score: 259.225 bits (661), Expect = 2.922e-78 Identity = 175/570 (30.70%), Postives = 280/570 (49.12%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQS----------TDSSMHPEAENA------------------------------VSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETE------RFRDIREFRELRDPIDTLAALQP----LLTHAATHPDDAMP-----------LLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 SKV+H+R++P++ E ++ ++ PFG ++ +++ + QA +EM + A +M Y P +R + ++Q+S+H L++ +D S+ A + S N ++ A VLR++V+ + ++ L +IFQ YG + +IV + Q IQY + SA+ AK+L +G ++ CC LR++ S +L++ +D RDF + P E + GG+ + R R ++ + + L P L T ++A+P L++ APA+RG+ S +L+VSNLNE + PDALF LFG YGDV RVKI+YN+K++ALIQ A + A A+ L+ + L+GKP+ V SKH + + P G + L R+Y+ + LHRFK+ S+N+ NIY PS LH++ + SE+DI+ FT N F VK + F +KMAL++L SVE A+ ALI++H++ L SN LRVSFSK Sbjct: 46 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDI-LHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGY-----------------------------SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAV--QLPKEGQPDAG----LTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSK 578
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Match: ptbp2b (polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]) HSP 1 Score: 296.204 bits (757), Expect = 1.223e-92 Identity = 182/550 (33.09%), Postives = 299/550 (54.36%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE---NAVS--------TTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIR------GFLDSQDLLPREISRHDRNDNFGRTHFGEKTSP--LLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSKQYL 1652 ++ ++KK+R E PPS+V+H+R LP++V+E E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +P +RN FIQYS+H L+ TDS+++ A+ AVS +++ S+ PVLR+++D+ + ++ L +IF +G + +I+ + Q +Q+S+P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P P+D + AA D+ LL + + + GF S + + GR + P +L+VSNLN+ + P +LF LFG YGDV RVKI+YN+K++ALIQ + AQ A+ LNG +YGK + V SKH + + P G +++ L +++ S LHRFK+ S+N NI+ PS LH++ + D+V+EED+ LF+++ VK + F +KM+L+++++ E AI+ALI+LH+YD+ G LRVSFSK + Sbjct: 34 ANGSDSKKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELK-TDSALNQRAQAVLQAVSAVQEGGSPSSDMASKSVLTPAPSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------PVDP--------SMAAALSKDSPSLLGTPSGMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSVPGGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRLLFSNSGGTVKAFKFFQD--RKMSLLQMATAEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 538
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1b (polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]) HSP 1 Score: 286.96 bits (733), Expect = 8.741e-89 Identity = 173/526 (32.89%), Postives = 276/526 (52.47%), Query Frame = 3 Query: 99 IRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQI---------CDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 IR PS+V+HVR LP+D+ E E+ ++ PFG ++ +++ + QA LEM ++E A+TM YY +P +RN F+QYS+H L++ +S A+ A+ N + D PVLR++V++ + ++ L +IF +G + +++ + Q +Q+++ +A+ AK +G ++ CC LR++FS SL++ +D RD+ R +P + + + P + A P A+ P + G L S + P + G T +++VSNLN ++ P LF LFG YGDV RVKIM+N+K ALIQ + AQ A+ LNG LYG+PL + SKH + + P G E++ L ++Y++S LHRFK+ S+N+SNI+ PS LH++ + V E+D++ LF + VK + F +KMAL+++SSVE AIE+LI+ H++DL G N LRVSFSK Sbjct: 63 IRSPAVPSRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDV-LHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYTRP----------------DLPTGDSQPALEHHAVAAAFAAPGIISAAPYASAHAFPPAFAIQQAGLTIPGVPGALASLTI-PGAAAAAAAASRLGFPTL-TGTHCVMLVSNLNPERVTPHCLFILFGVYGDVLRVKIMFNKKENALIQMSDGTQAQLAMSHLNGQKLYGRPLRITLSKHTTV--QMPREGHEDQG----LTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKD-RKMALIQMSSVEEAIESLIQFHNHDL-GENHHLRVSFSK 561
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1b (polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]) HSP 1 Score: 286.189 bits (731), Expect = 1.200e-88 Identity = 173/526 (32.89%), Postives = 276/526 (52.47%), Query Frame = 3 Query: 99 IRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQI---------CDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 IR PS+V+HVR LP+D+ E E+ ++ PFG ++ +++ + QA LEM ++E A+TM YY +P +RN F+QYS+H L++ +S A+ A+ N + D PVLR++V++ + ++ L +IF +G + +++ + Q +Q+++ +A+ AK +G ++ CC LR++FS SL++ +D RD+ R +P + + + P + A P A+ P + G L S + P + G T +++VSNLN ++ P LF LFG YGDV RVKIM+N+K ALIQ + AQ A+ LNG LYG+PL + SKH + + P G E++ L ++Y++S LHRFK+ S+N+SNI+ PS LH++ + V E+D++ LF + VK + F +KMAL+++SSVE AIE+LI+ H++DL G N LRVSFSK Sbjct: 54 IRSPAVPSRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDV-LHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYTRP----------------DLPTGDSQPALEHHAVAAAFAAPGIISAAPYASAHAFPPAFAIQQAGLTIPGVPGALASLTI-PGAAAAAAAASRLGFPTL-TGTHCVMLVSNLNPERVTPHCLFILFGVYGDVLRVKIMFNKKENALIQMSDGTQAQLAMSHLNGQKLYGRPLRITLSKHTTV--QMPREGHEDQG----LTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKD-RKMALIQMSSVEEAIESLIQFHNHDL-GENHHLRVSFSK 552
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 283.493 bits (724), Expect = 4.615e-88 Identity = 184/546 (33.70%), Postives = 281/546 (51.47%), Query Frame = 3 Query: 75 SDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTNQICDSMAKEQAG-------PVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRD-IREFRELRDPIDTLAALQPLLTHA-ATHPDDAMPLLRSIAP------AIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 +D+++ K R PS+VLHVR +P +V+E E+ S+ PFG ++ +++ + QA +EM ++E A TM YY +PH+RN+ +IQYS+H L++ + + +A NAV T N A G PVLR++V++ + ++ L +IF +G + +I+ + Q +QY++P +A AK +G ++ CC LRV FS SL++ +D RDF R + + G G P + + P A P + A AMP ++ P A+ G + + P I +L+VSNLN I P LF LFG YGDV RVKI++N+K ALIQ A AQ A+ LNG LYGK + V SKH + + P G E++ L ++++ S LHRFK+ S+N NI+ PS LH++ + +++ ++ LF + + VK + F +KMAL++L SVE AI+ALI LH++DL G N LRVSFSK Sbjct: 5 TDSKQYKGDRSPCAPSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENL-YYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTSLNVKYNNDKSRDFTR----------LDLPSGDGQPTLDPTMQTAFGAPGIISSPYPGAAGFAPAIGFPQAGLSMQAMP--GALGPLTIPSSAMTGRMAIHGMTPTAIHS------------------VLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTV--QLPREGQEDQG----LTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQKD-RKMALIQLGSVEEAIQALIHLHNHDL-GENHHLRVSFSK 511
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 283.108 bits (723), Expect = 7.005e-88 Identity = 184/546 (33.70%), Postives = 281/546 (51.47%), Query Frame = 3 Query: 75 SDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTNQICDSMAKEQAG-------PVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRD-IREFRELRDPIDTLAALQPLLTHA-ATHPDDAMPLLRSIAP------AIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 +D+++ K R PS+VLHVR +P +V+E E+ S+ PFG ++ +++ + QA +EM ++E A TM YY +PH+RN+ +IQYS+H L++ + + +A NAV T N A G PVLR++V++ + ++ L +IF +G + +I+ + Q +QY++P +A AK +G ++ CC LRV FS SL++ +D RDF R + + G G P + + P A P + A AMP ++ P A+ G + + P I +L+VSNLN I P LF LFG YGDV RVKI++N+K ALIQ A AQ A+ LNG LYGK + V SKH + + P G E++ L ++++ S LHRFK+ S+N NI+ PS LH++ + +++ ++ LF + + VK + F +KMAL++L SVE AI+ALI LH++DL G N LRVSFSK Sbjct: 13 TDSKQYKGDRSPCAPSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENL-YYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTSLNVKYNNDKSRDFTR----------LDLPSGDGQPTLDPTMQTAFGAPGIISSPYPGAAGFAPAIGFPQAGLSMQAMP--GALGPLTIPSSAMTGRMAIHGMTPTAIHS------------------VLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTV--QLPREGQEDQG----LTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQKD-RKMALIQLGSVEEAIQALIHLHNHDL-GENHHLRVSFSK 519
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 299.286 bits (765), Expect = 8.158e-94 Identity = 183/541 (33.83%), Postives = 292/541 (53.97%), Query Frame = 3 Query: 75 SDNEENKKIR----REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQICDSMAKEQ------AGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ +NKK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TDS+++ A+ AV T+N S A + PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P G ++ + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++++S LHRFK+ S+N NI+ PS LH++ + +++E+D+ LFT+ VK + F KMAL+++S+VE AI+ALI+LH+Y++ G N LRVSFSK Sbjct: 39 ANGNDNKKFKGDDKMEAAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELK-TDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPL--GIPNA-----AAAAAAAAASRVGMHGVSTGGNTVLLVSNLNEEMVSPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGGNVKAFKFFQD--HKMALLQMSTVEEAIQALIDLHNYNI-GDNHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 279.641 bits (714), Expect = 1.295e-86 Identity = 181/545 (33.21%), Postives = 287/545 (52.66%), Query Frame = 3 Query: 63 EEDISDNEENKKIR----REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQICDSMAKEQ------AGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 + D ++ +NKK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TDS+++ A+ AV T+N S A + PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + AA + L ++ P L + + G T +L+VSNLNE + + YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++++S LHRFK+ S+N NI+ PS LH++ + +++E+D+ LFT+ VK + F KMAL+++S+VE AI+ALI+LH+Y++ G N LRVSFSK Sbjct: 4 DPDYANGNDNKKFKGDDKMEAAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELK-TDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAI--AAAFAKETSLLGKASVPGALSPLGIPNAAAAAAAAAASRVGMHGVSTGGNT--VLLVSNLNE-----EVSETILCVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGGNVKAFKFFQD--HKMALLQMSTVEEAIQALIDLHNYNI-GDNHHLRVSFSK 495
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 277.33 bits (708), Expect = 2.607e-85 Identity = 180/541 (33.27%), Postives = 285/541 (52.68%), Query Frame = 3 Query: 75 SDNEENKKIR----REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQICDSMAKEQ------AGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ +NKK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TDS+++ A+ AV T+N S A + PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + AA + L ++ P L + + G T +L+VSNLNE + + YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++++S LHRFK+ S+N NI+ PS LH++ + +++E+D+ LFT+ VK + F KMAL+++S+VE AI+ALI+LH+Y++ G N LRVSFSK Sbjct: 41 ANGNDNKKFKGDDKMEAAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELK-TDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAI--AAAFAKETSLLGKASVPGALSPLGIPNAAAAAAAAAASRVGMHGVSTGGNT--VLLVSNLNE-----EVSETILCVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGGNVKAFKFFQD--HKMALLQMSTVEEAIQALIDLHNYNI-GDNHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 275.404 bits (703), Expect = 3.317e-85 Identity = 177/531 (33.33%), Postives = 280/531 (52.73%), Query Frame = 3 Query: 93 KKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQICDSMAKEQ------AGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 KK+ PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TDS+++ A+ AV T+N S A + PVLR+++D+ + ++ L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + AA + L ++ P L + + G T +L+VSNLNE + + YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++++S LHRFK+ S+N NI+ PS LH++ + +++E+D+ LFT+ VK + F KMAL+++S+VE AI+ALI+LH+Y++ G N LRVSFSK Sbjct: 4 KKLESLPAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELK-TDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNMYYPVTLDV-LHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAI--AAAFAKETSLLGKASVPGALSPLGIPNAAAAAAAAAASRVGMHGVSTGGNT--VLLVSNLNE-----EVSETILCVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGGNVKAFKFFQD--HKMALLQMSTVEEAIQALIDLHNYNI-GDNHHLRVSFSK 481
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 275.789 bits (704), Expect = 9.036e-85 Identity = 183/550 (33.27%), Postives = 283/550 (51.45%), Query Frame = 3 Query: 60 VEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQI------------CDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTS----PLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSKQYL 1652 ++ + +D+++ K R PS+VLH+R +P+DVTE EI S+ PFG ++ +++ + QA LEM ++E A +M YY PH+R++ +IQYS+H L++ + A+ A+ N + + + PVLR++V++ + +T L +IF +G + +I+ + Q +QY++P +A AK +G ++ CC LR+ FS SL++ +D RDF R + + G G P +T + P A P A P + + P + G L L I+ GR T+ +L+VSNLN I P LF LFG YGDV RVKI++N+K AL+Q AQ A+ LNG L+G+ L + SKH + + P G E++ L ++Y +S LHRFK+ S+N NI+ PS LH++ + V++ED++ LF VK + F +KMAL++L SVE AI ALIELH++DL G N LRVSFSK + Sbjct: 18 LQANGNDSKKFKGDRSPCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENLFYP-VTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLDTTMAAAFGAPGIISSPYAGAAGFAP----AIGFPQAGLSV-----PGVPG-LGPLALTTSAIT--------GRMAIPGMTAIPGHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSV--QLPREGHEDQG----LTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKD-RKMALIQLGSVEEAILALIELHNHDL-GENHHLRVSFSKSMI 530
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 291.582 bits (745), Expect = 4.764e-91 Identity = 191/556 (34.35%), Postives = 292/556 (52.52%), Query Frame = 3 Query: 36 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTN-QICDSMAKEQA-----GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHF----GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 M V + +DN++ K R PS+VLH+R +P DVTE E+ S+ PFG ++ +++ + QA LEM ++E A TM YY +PHLR++ +IQYS+H L++ + + +A +AV + N + + A E PVLR+++++ + +T L +IF +G + +I+ + Q +QY++P +A+ AK +G ++ CC LR++FS SL++ +D RDF R + + G G P E + P A P + A P ++ PA+ G L L +S GR G + +L+V+NLN I P LF LFG YGDV RVKIM+N+K AL+Q A AQ A+ L+G LYGK L SKH + + P G E++ L +++++S LHRFK+ S+N NI+ PS LH++ + V+ +D++ LFT+ VK + F +KMAL++L SVE AI+ALIELH++DL G N LRVSFSK Sbjct: 1 MNSSTSAGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYP-VTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAI---------AFPQAAGLSVPAVPGALGPLTLTSSAVS--------GRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAV--QLPREGQEDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKD-RKMALIQLGSVEEAIQALIELHNHDL-GENHHLRVSFSK 520
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Match: Ptbp2 (polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]) HSP 1 Score: 291.197 bits (744), Expect = 8.228e-91 Identity = 178/525 (33.90%), Postives = 279/525 (53.14%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 291.582 bits (745), Expect = 9.746e-91 Identity = 191/559 (34.17%), Postives = 293/559 (52.42%), Query Frame = 3 Query: 36 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTN-QICDSMAKEQA-----GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHF----GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSKQYL 1652 M V + +DN++ K R PS+VLH+R +P DVTE E+ S+ PFG ++ +++ + QA LEM ++E A TM YY +PHLR++ +IQYS+H L++ + + +A +AV + N + + A E PVLR+++++ + +T L +IF +G + +I+ + Q +QY++P +A+ AK +G ++ CC LR++FS SL++ +D RDF R + + G G P E + P A P + A P ++ PA+ G L L +S GR G + +L+V+NLN I P LF LFG YGDV RVKIM+N+K AL+Q A AQ A+ L+G LYGK L SKH + + P G E++ L +++++S LHRFK+ S+N NI+ PS LH++ + V+ +D++ LFT+ VK + F +KMAL++L SVE AI+ALIELH++DL G N LRVSFSK + Sbjct: 32 MNSSTSAGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYP-VTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAI---------AFPQAAGLSVPAVPGALGPLTLTSSAVS--------GRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAV--QLPREGQEDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKD-RKMALIQLGSVEEAIQALIELHNHDL-GENHHLRVSFSKSTI 554
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Match: Ptbp2 (polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]) HSP 1 Score: 290.812 bits (743), Expect = 1.293e-90 Identity = 178/525 (33.90%), Postives = 279/525 (53.14%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRD-HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 529
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 290.041 bits (741), Expect = 1.505e-90 Identity = 189/543 (34.81%), Postives = 289/543 (53.22%), Query Frame = 3 Query: 75 SDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTN-QICDSMAKEQA-----GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHF----GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 +DN++ K R PS+VLH+R +P DVTE E+ S+ PFG ++ +++ + QA LEM ++E A TM YY +PHLR++ +IQYS+H L++ + + +A +AV + N + + A E PVLR+++++ + +T L +IF +G + +I+ + Q +QY++P +A+ AK +G ++ CC LR++FS SL++ +D RDF R + + G G P E + P A P + A P ++ PA+ G L L +S GR G + +L+V+NLN I P LF LFG YGDV RVKIM+N+K AL+Q A AQ A+ L+G LYGK L SKH + + P G E++ L +++++S LHRFK+ S+N NI+ PS LH++ + V+ +D++ LFT+ VK + F +KMAL++L SVE AI+ALIELH++DL G N LRVSFSK Sbjct: 11 NDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYP-VTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAI---------AFPQAAGLSVPAVPGALGPLTLTSSAVS--------GRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAV--QLPREGQEDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKD-RKMALIQLGSVEEAIQALIELHNHDL-GENHHLRVSFSK 517
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Match: sp|Q8BHD7|PTBP3_MOUSE (Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.332e-90 Identity = 191/556 (34.35%), Postives = 292/556 (52.52%), Query Frame = 3 Query: 36 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTN-QICDSMAKEQA-----GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHF----GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 M V + +DN++ K R PS+VLH+R +P DVTE E+ S+ PFG ++ +++ + QA LEM ++E A TM YY +PHLR++ +IQYS+H L++ + + +A +AV + N + + A E PVLR+++++ + +T L +IF +G + +I+ + Q +QY++P +A+ AK +G ++ CC LR++FS SL++ +D RDF R + + G G P E + P A P + A P ++ PA+ G L L +S GR G + +L+V+NLN I P LF LFG YGDV RVKIM+N+K AL+Q A AQ A+ L+G LYGK L SKH + + P G E++ L +++++S LHRFK+ S+N NI+ PS LH++ + V+ +D++ LFT+ VK + F +KMAL++L SVE AI+ALIELH++DL G N LRVSFSK Sbjct: 1 MNSSTSAGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYP-VTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAI---------AFPQAAGLSVPAVPGALGPLTLTSSAVS--------GRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAV--QLPREGQEDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKD-RKMALIQLGSVEEAIQALIELHNHDL-GENHHLRVSFSK 520
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Match: sp|Q66H20|PTBP2_RAT (Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 5.756e-90 Identity = 178/525 (33.90%), Postives = 279/525 (53.14%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Match: sp|Q91Z31|PTBP2_MOUSE (Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 5.756e-90 Identity = 178/525 (33.90%), Postives = 279/525 (53.14%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + +T L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Match: sp|Q9UKA9|PTBP2_HUMAN (Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 6.200e-90 Identity = 180/543 (33.15%), Postives = 287/543 (52.85%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE------NAVSTTNQ------ICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRN--DNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + E PS+VLH+R LP +VTE E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +PHLRN+ +IQYS+H L+ TD++++ A+ AV T N + +S PVLR+++D+ + ++ L +IF +G + +I+ + Q +QY +P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P AL P + A + + +++P +P + G + +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A +Q A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + V+EED+ LF + VK + F KMAL+++++VE AI+ALI+LH+Y+L G N LRVSFSK Sbjct: 39 ANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELK-TDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDV-LHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTR-PDLPS---------GDGQP-----------------------ALDPAIAAAFAKETSLLAVPGALSPLA---------IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQD--HKMALLQMATVEEAIQALIDLHNYNL-GENHHLRVSFSK 528
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Match: sp|Q9Z118|PTBP3_RAT (Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.129e-88 Identity = 188/556 (33.81%), Postives = 288/556 (51.80%), Query Frame = 3 Query: 36 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTD------SSMHPEAENAVSTTNQICDSMAKEQA------GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPK-ETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIA-PAIRGFLDSQDLLPREISRHDRNDNFGRTHF----GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 M V + +DN++ K R PS+VLH+R +P DVTE E+ S+ PFG ++ +++ + QA LEM ++E A TM YY +PHLR++ +IQYS+H L++ + + +A +AV + N + PVLR+++++ + +T L +IF +G + +I+ + Q +QY++P +A+ AK +G ++ CC LR++FS SL++ +D RDF R + + G G P E + P A P + A P ++ A+ G L L +S GR G + +L+V+NLN I P LF LFG YGDV RVKIM+N+K AL+Q A AQ A+ L+G LYGK L SKH + + P G E++ L +++++S LHRFK+ S+N NI+ PS LH++ + V+ +D++ LFT+ VK + F +KMAL++L SVE AI+ALIELH++DL G N LRVSFSK Sbjct: 1 MNNSTSAGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYP-VTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTR----------LDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAI---------AFPQAAGLSVSAVPGALGPLTLTSSAVS--------GRMAIPGASGIPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQIAMNHLSGQRLYGKVLRATLSKHQAV--QLPREGQEDQG----LTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKD-RKMALIQLGSVEEAIQALIELHNHDL-GENHHLRVSFSK 520
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Match: A0A3Q0KEH4 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 1.307e-95 Identity = 214/610 (35.08%), Postives = 303/610 (49.67%), Query Frame = 3 Query: 30 FMMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQ--STDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQEL-----------------------------------KNIHVNIGGGIPKETERFRDIREFRELRDPIDTLA-----ALQPLLTHA--------------ATHPDDAMPLLRSIAPAIRGFLDSQDLLPR--------------EISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 F+M +E D ++N++++ E PSKV+H+R++PDD TE EIA + PFG + MVL++K QALLEM+ E A M YY+ + LR + +QYS H L+ S +SS+ +NA Q VLR+VVD+ ++I + L KIF YG + RIV Y+ G +++ A VA NG ++ CC LRV FS NR L++ +E D RD++ +P++ +EL + IH+ +G P T EL + LA AL P A T P L +I A++G +LP +S H R+ S +LIVSNLNE +++PDALF LFG YGDVTRVKIM+N+K+TALIQF A ALQFLNG L+ KP+ + S+H+ I +E T + L ++Y +S LHRF++ S+N NIY PS VLH++ + V+E DI LF F V R + KMALV+L +V+ AI++LIELH+ L S+LR+SFSK Sbjct: 22 FIMNGNGHAPMETDTNENKKSRIEYVETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSM----GINELTAQLAALAQQSGLALTPAAVAATASFMALTSQNSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGV-RSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHN-------IVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFMKDN--KMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSK 617
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Match: A0A5K4ECD7 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 1.997e-95 Identity = 214/610 (35.08%), Postives = 303/610 (49.67%), Query Frame = 3 Query: 30 FMMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQ--STDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQEL-----------------------------------KNIHVNIGGGIPKETERFRDIREFRELRDPIDTLA-----ALQPLLTHA--------------ATHPDDAMPLLRSIAPAIRGFLDSQDLLPR--------------EISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 F+M +E D ++N++++ E PSKV+H+R++PDD TE EIA + PFG + MVL++K QALLEM+ E A M YY+ + LR + +QYS H L+ S +SS+ +NA Q VLR+VVD+ ++I + L KIF YG + RIV Y+ G +++ A VA NG ++ CC LRV FS NR L++ +E D RD++ +P++ +EL + IH+ +G P T EL + LA AL P A T P L +I A++G +LP +S H R+ S +LIVSNLNE +++PDALF LFG YGDVTRVKIM+N+K+TALIQF A ALQFLNG L+ KP+ + S+H+ I +E T + L ++Y +S LHRF++ S+N NIY PS VLH++ + V+E DI LF F V R + KMALV+L +V+ AI++LIELH+ L S+LR+SFSK Sbjct: 13 FIMNGNGHAPMETDTNENKKSRIEYVETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSM----GINELTAQLAALAQQSGLALTPAAVAATASFMALTSQNSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGV-RSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHN-------IVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFMKDN--KMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSK 608
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Match: G4VQG0 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 GN=Smp_036590.1 PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 3.915e-95 Identity = 215/598 (35.95%), Postives = 297/598 (49.67%), Query Frame = 3 Query: 75 SDNEENKKIR---REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQ--STDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQEL-----------------------------------KNIHVNIGGGIPKETERFRDIREFRELRDPIDTLA-----ALQPLLTHA--------------ATHPDDAMPLLRSIAPAIRGFLDSQDLLPR--------------EISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 +D ENKK R E PSKV+H+R++PDD TE EIA + PFG + MVL++K QALLEM+ E A M YY+ + LR + +QYS H L+ S +SS+ +NA Q VLR+VVD+ ++I + L KIF YG + RIV Y+ G +++ A VA NG ++ CC LRV FS NR L++ +E D RD++ +P++ +EL + IH+ +G P T EL + LA AL P A T P L +I A++G +LP +S H R+ S +LIVSNLNE +++PDALF LFG YGDVTRVKIM+N+K+TALIQF A ALQFLNG L+ KP+ + S+H+ I +E T + L ++Y +S LHRF++ S+N NIY PS VLH++ + V+E DI LF F V R + KMALV+L +V+ AI++LIELH+ L S+LR+SFSK Sbjct: 11 TDTNENKKSRIEYVETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSM----GINELTAQLAALAQQSGLALTPAAVAATASFMALTSQNSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGV-RSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHN-------IVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFMKDN--KMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSK 594
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Match: A0A267E2T6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig010779g1 PE=4 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 6.671e-95 Identity = 200/543 (36.83%), Postives = 297/543 (54.70%), Query Frame = 3 Query: 93 KKIRRE--IP---PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDT-LAALQPLLTH--AATHPDDAMPLLR-SIAPAIRGFLDSQ---DLLPRE-----ISRHDRNDN---FGRTHFGEKTS--PLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGS-NLRVSFSKQYL 1652 KK+R E +P PSKV+H+R++P D E +I + PFG ++ MVL +K QALLEM+T+E A M +YY +H +R + IQYS+H L++ + AENA+S+ N + + +++ VLR++V++ +T L KIF +G++++IVI+ Q IQ A AK + N ++ CC LR++FS +L++ ++ RDF VN R P D LA P L AT +P L + AP + LD Q + P +S H FG+ + S +L+VSNL++ KI PDALF LFG YGDV RVKIMYN+K+ ALIQF AQ+ALQ LNGV L+G+PL + FS+H +++ P G++ T + + +S LHRFK+ S+N NI+ PS++LH++ + +V EE I+A+F D F V I+ F KKMALV++ +VE ++ ALI+LH+Y L + +LRVSFSK + Sbjct: 57 KKVRLENHVPEPEPSKVVHIRNVPQDAIENDIVQLGVPFGQMTNMVLAKKKNQALLEMKTQETATKMVDYYAQHPVTIRGRTVIIQYSNHAELKTEQPNA--AAENALSSANGLVSTYQQDEPPSVLRVIVENL-MAPVTIEVLHKIFSRFGMVQKIVIFSKNNTFQALIQMGSSTEALAAKLVLNDQNIYNGCCTLRIDFSKLNTLNVKFNNEKSRDFT-------------VN---------------------RAPGDNPLAYFDPNLAPHLGATLFPAMIPGLEFAQAPILAQTLDGQPNLGIFPAAAQLPAMSMHSLTSPVAPFGQAIMAPQASVNSILLVSNLDDEKITPDALFTLFGVYGDVQRVKIMYNKKDNALIQFTDASQAQQALQNLNGVRLFGRPLKIAFSRHAQVA--LPKEGADAGLT-----KIFTNSPLHRFKKPHSKNFQNIFPPSQILHLSNIPQEVPEEKIKAIFEDFGFNVVAIKFFQKE-KKMALVQMPTVEDSVIALIKLHNYQLSANYHLRVSFSKSVI 554
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Match: C1LNM3 (Regulator of differentiation 1 OS=Schistosoma japonicum OX=6182 PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.334e-94 Identity = 211/609 (34.65%), Postives = 303/609 (49.75%), Query Frame = 3 Query: 30 FMMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQ--STDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGG------------------IPKETERFRDI------------REFRELRDPIDTLA-------------------ALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFG---------RTHF---------GEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 F+M +E D ++N++++ E PSKV+H+R++PDD TE EIA + PFG + MVL++K QALLEM+ E A M YY+ + LR + +QYS H L+ S ++S+ +NA Q VLR+VVD+ ++I + L KIF YG + RIV Y+ G +++ A VA NG ++ CC LRV FS NR L++ +E + RD++ +P++ +EL ++ GG +P T + + EL + LA AL + T P L +I A++G +LP H N G TH S +LIVSNLNE +++PDALF LFG YGDVTRVKIM+N+K+TALIQF A ALQFLNG L+ KP+ + S+H+ I +E T + L ++Y +S LHRF++ S+N NIY PS VLH++ + V+E DI LF F V R + KMALV+L +V+ AI++LIELH+ L S+LR+SFSK Sbjct: 13 FIMNGNGHAPMETDTNENKKSRIEYVETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRTLVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESEKCRDYLNNPLTEEELLSLRRPTAGGGHHNNNPGHNSSNFQNSVVPNMTHQGIHLPVGMIAPPNANNMGINELTAQLAALAQQSGLALTPAAAAATASFMALTSQTSGPGTQSMSGTPNLSAILAALQGGAVQTGVLP-----HISGGNAGVMGSVQSPVSTHVTPVGVRPPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFTDPHQALTALQFLNGQRLWDKPMKIAVSRHN-------IVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFMKDN--KMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSK 607
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 305.064 bits (780), Expect = 2.197e-96 Identity = 185/542 (34.13%), Postives = 297/542 (54.80%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE---NAVS--------TTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSKQYL 1652 ++ ++KK+R E PPS+V+H+R LP++V+E E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +P +RN FIQYS+H L+ TDS+++ A+ AVS +++ DS+ PVLR+++D+ + ++ L +IF +G + +I+ + Q +Q+S+P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P P+D + AA D+ LL +I+P + +S H +L+ SNLN+ + P +LF LFG YGDV RVKI+YN+K++ALIQ A AQ A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + DDV+EED+ LF+++ VK + F +KMAL+++S+VE AI+ALI+LH+YD+ G LRVSFSK + Sbjct: 34 ANGSDSKKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELK-TDSALNQRAQAVLQAVSAVQEGGSPSSDTAGDSILSPAPSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------PVDP--------SMAAALSKDSTSLLGAISPLSAAAAAAAAAGRVALSGHSGGGG------------VLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFFQD--RKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 518
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 301.597 bits (771), Expect = 8.043e-95 Identity = 186/551 (33.76%), Postives = 298/551 (54.08%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE---NAVS--------TTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREIS-------RHDRNDNFGRTHFG--EKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSKQYL 1652 ++ ++KK+R E PPS+V+H+R LP++V+E E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +P +RN FIQYS+H L+ TDS+++ A+ AVS +++ DS+ PVLR+++D+ + ++ L +IF +G + +I+ + Q +Q+S+P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P P+D + AA D+ LL S + + + S P + GR +L+ SNLN+ + P +LF LFG YGDV RVKI+YN+K++ALIQ A AQ A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + DDV+EED+ LF+++ VK + F +KMAL+++S+VE AI+ALI+LH+YD+ G LRVSFSK + Sbjct: 34 ANGSDSKKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELK-TDSALNQRAQAVLQAVSAVQEGGSPSSDTAGDSILSPAPSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------PVDP--------SMAAALSKDSTSLLGSPSGMVTSY-SSAGAYPSSLGAISPLSAAAAAAAAAGRVALSGHSGGGGVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFFQD--RKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 538
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Match: ptbp2a (polypyrimidine tract-binding protein 2 [Source:NCBI gene;Acc:103025597]) HSP 1 Score: 296.975 bits (759), Expect = 9.581e-94 Identity = 180/535 (33.64%), Postives = 290/535 (54.21%), Query Frame = 3 Query: 60 VEEDISDNEENKKIRRE-----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 + + S+ ++KK+R E PPS+VLH+R LP++V+E E+ ++ PFG ++ ++ + QA LE+ T+E A TM YY +PH+RN FIQYS+H L++ ++ N + ++ D + PVLR+++D+ + ++ L +IF +G + +I+ + Q +QY++ SA+ AK +G ++ CC LR+++S +L++ +D RD+ R P P G G P A+ P + AA D+ LL +++P + +S H N S +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A AQ A+ LNG +Y K + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + D++E+D+ LFT++ VK + F +KMAL++LS+VE AI+ LI+LH+Y++ G N LRVSFSK Sbjct: 12 ISDGTSNGSDSKKLRVEDRVGDAPPSRVLHIRKLPNEVSETEVIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTPHVRNVPVFIQYSNHKELKTDNA-------NQSTPSSGSSDGTLTSPSSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQYNDAGSAQQAKVALDGQNIYNACCTLRIDYSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------------AVDP--SMAAAFSKDSNSLLGALSPLSAAAAAAAAAGRVALSGHSGN------------SGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADLNQAQLAMSHLNGQKMYSKIIRVTMSKHQTV--QLPRDGLDDQG----LTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFFQD--RKMALIQLSTVEEAIQCLIDLHNYNM-GDNHHLRVSFSK 482
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Match: ptbp2a (polypyrimidine tract-binding protein 2 [Source:NCBI gene;Acc:103025597]) HSP 1 Score: 293.508 bits (750), Expect = 4.963e-92 Identity = 181/538 (33.64%), Postives = 290/538 (53.90%), Query Frame = 3 Query: 60 VEEDISDNEENKKIRRE-----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSKQYL 1652 + + S+ ++KK+R E PPS+VLH+R LP++V+E E+ ++ PFG ++ ++ + QA LE+ T+E A TM YY +PH+RN FIQYS+H L++ ++ N + ++ D + PVLR+++D+ + ++ L +IF +G + +I+ + Q +QY++ SA+ AK +G ++ CC LR+++S +L++ +D RD+ R P P G G P A+ P + AA D+ LL I P L + R + + G S +L+VSNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ A AQ A+ LNG +Y K + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + D++E+D+ LFT++ VK + F +KMAL++LS+VE AI+ LI+LH+Y++ G N LRVSFSK + Sbjct: 34 ISDGTSNGSDSKKLRVEDRVGDAPPSRVLHIRKLPNEVSETEVIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTPHVRNVPVFIQYSNHKELKTDNA-------NQSTPSSGSSDGTLTSPSSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQYNDAGSAQQAKVALDGQNIYNACCTLRIDYSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------------AVDP--SMAAAFSKDSNSLLGKI-PGALSPLSAAAAAAAAAGRVALSGHSGN-------SGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADLNQAQLAMSHLNGQKMYSKIIRVTMSKHQTV--QLPRDGLDDQG----LTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFFQD--RKMALIQLSTVEEAIQCLIDLHNYNM-GDNHHLRVSFSKSTI 511
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 281.952 bits (720), Expect = 4.813e-88 Identity = 179/539 (33.21%), Postives = 288/539 (53.43%), Query Frame = 3 Query: 75 SDNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE---NAVS--------TTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 ++ ++KK+R E PPS+V+H+R LP++V+E E+ ++ PFG ++ +++ + QA LE+ T+E A TM YY +P +RN FIQYS+H L+ TDS+++ A+ AVS +++ DS+ PVLR+++D+ + ++ L +IF +G + +I+ + Q +Q+S+P +A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P G G P P+D + AA D+ LL +I+P + +S H +L+ SNLN+ YGDV RVKI+YN+K++ALIQ A AQ A+ LNG +YGK + V SKH + + P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ + DDV+EED+ LF+++ VK + F +KMAL+++S+VE AI+ALI+LH+YD+ G LRVSFSK Sbjct: 4 ANGSDSKKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELK-TDSALNQRAQAVLQAVSAVQEGGSPSSDTAGDSILSPAPSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTR-PELPA---------GDGQP-----------------PVDP--------SMAAALSKDSTSLLGAISPLSAAAAAAAAAGRVALSGHSGGGG------------VLLASNLNDE----------VSVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTV--QLPREGLDDQG----LTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFFQD--RKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSK 475
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006507.1 (pep scaffold:Pmarinus_7.0:GL480554:3468:10153:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006507.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 117.472 bits (293), Expect = 7.952e-30 Identity = 67/236 (28.39%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 75 SDNEENKKIRREIP---PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSM-----HPEAENAVSTTNQICDSMAKEQA------GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVR 740 ++ E+KK + + PSKVLH+R LP++ TE E+ ++A PFG ++ +++ + QA LEM ++E A +Y P LRN+ ++QYS + +L++ +S+ H E + + E+ P+L ++V++ + IT L +F YG + +I+I+ Q +Q+++ +A AK + +G ++ CC LRV FS +L++ ++ RD R Sbjct: 8 AEGSESKKFKGDSSDELPSKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVENLLY-PITLEVLHHVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAKTMLDGQNIYNGCCTLRVGFSRLTNLNVKYNNEKSRDLTR 242
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008413.1 (pep scaffold:Pmarinus_7.0:GL478562:177533:180128:-1 gene:ENSPMAG00000007617.1 transcript:ENSPMAT00000008413.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.9005 bits (237), Expect = 1.964e-23 Identity = 57/149 (38.26%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 1209 ALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSKQYL 1652 + LNG +YGKP+ V S++ + + P GS D L +++DS LHRF+R ++N +I+ PS LH++ + V E+D++ LF N VK ++ F ++ KMALV++ S+E AI+ L ELH+++L + LRVSFSK + Sbjct: 21 VMNHLNGQRMYGKPIRVTSSRYQTV--QLPRDGS------DSLTCDFSDSPLHRFRRMGAKNFHHIFPPSVTLHLSNIPSSVLEDDLKTLFESNGCVVKALKFF-ATDHKMALVQMESLEEAIQTLAELHNHELEKNRLLRVSFSKSVI 160
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006509.1 (pep scaffold:Pmarinus_7.0:GL480554:3489:6552:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006509.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 93.2041 bits (230), Expect = 6.049e-22 Identity = 57/206 (27.67%), Postives = 106/206 (51.46%), Query Frame = 3 Query: 75 SDNEENKKIRREIP---PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSM-----HPEAENAVSTTNQICDSMAKEQA------GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVF 650 ++ E+KK + + PSKVLH+R LP++ TE E+ ++A PFG ++ +++ + QA LEM ++E A +Y P LRN+ ++QYS + +L++ +S+ H E + + E+ P+L ++V++ + IT L +F YG + +I+I+ Q +Q+++ +A AK G V+ Sbjct: 1 AEGSESKKFKGDSSDELPSKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVENLLY-PITLEVLHHVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAKTANPGWSVY 205
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 94.7449 bits (234), Expect = 4.716e-21 Identity = 102/455 (22.42%), Postives = 182/455 (40.00%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQS---LDISREDDLVRDF-VRHPVSPQELKNIHVNIGGGIPKETERFRDIR-EFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSE-EEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEE 1463 PS V+H+R L E ++ FG + ++V+ QAL+E E E A ++ + + +S T Q A++ V+ TN I L L V++ + IT + I YG+++RIVI+ G VQ + SA+ AK+ NG ++ CC L++ ++ + L++ R D D+ + P P + + G P + + + + + + P T P P + H+ G G + +++V N+N + ++ LF L YG+V ++K + ++ +IQ A RA+ LN L+G+ L ++ SK I +AG E G R++ S+ +RF + + + I PS +LH + SE+ Sbjct: 10 PSPVVHIRGLASSADESQVMEALQEFGTVRHVVMMPHRRQALVEFERLEDARACVAGTAGDPVYVGGQPAYCNFS---TSQRISRKGGTPADD-VARTNHI------------LLLTVNNALY-PITTEVIHTICSPYGVVQRIVIFKKNG-VQALRTFDSIPSAQQAKSSLNGADIYSGCCTLKIEYAKERKPARLNVYRNDSETWDYTLEGPCVPNGQQKKQPALLGDHPSTMRGYGNQQGTYCPQNYSFNNYTSGSPFGNARPTTPMSG---------------------PGTCAPHNNPCPMG----GSAANRVMMVYNMNPSVMNCSRLFNLVCLYGNVEKIKFLKSKPGVGMIQMADAASVDRAVANLNTAQLFGQKLSLSVSKQQEI-----VAGQAFELEDGSDSFRDFVGSRHNRFSTHEQASKNRILPPSAILHFYSAPPEFSEQ 416
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 72.4034 bits (176), Expect = 1.145e-13 Identity = 57/219 (26.03%), Postives = 94/219 (42.92%), Query Frame = 3 Query: 114 PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKN 770 PPS V+HVR L D E ++ FG ISY+V+ K QAL+E E E + + Y S ++ + + +S T Q PE +N I + P+ + D L+ I G ++RIVI+ G+ Q + SA+ AK+ NG ++ CC L+V ++ L++ + D D+ + + +N Sbjct: 46 PPSAVVHVRGLSDAALESDLVEAVQHFGPISYVVMMPKKRQALVEFEDLESSRSCVNYSSTGSIYVCGQPAYFNFS---TSQKISRPGGPEDNR---NSNHI---LLFTILNPIYPITTD----------VLYTICNPCGPVQRIVIFRKNGL-QAMATFDSVQSAQRAKSSLNGADIYSGCCTLKVEYAKPTRLNVFKNDSETWDYTNPGLKAGQAEN 244 HSP 2 Score: 60.077 bits (144), Expect = 8.843e-10 Identity = 50/206 (24.27%), Postives = 98/206 (47.57%), Query Frame = 3 Query: 1053 LLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEE-ATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKF-RVKKIRVFNS-SGKKMA-LVELSSVESAIEALIELHDYDLCGSN------LRVSFS 1640 +L+V + +I+ D +F + +G+V +VK + ++ A+++ RA+ LN ++GK +++ SK I + G E G ++++ S+ +RF A+ + I +P+ VLH D++ E L + R + F+ S K M+ L+E + A+EAL ++ + L +N L++ FS Sbjct: 316 VLMVYGFDAERINCDRVFNILCLFGNVEKVKFLKSKPGAAMVEMGDPYAVDRAVSHLNMSQIFGKKINLCVSKQQSI-----VPGQAYELPDGTNSYKDFTGSRNNRFANAEKAAKNRIQQPTTVLHFFNAPMDITAEIFMQLCDEMSIARPLSFKAFSGKSDKSMSGLMEWENKNDAMEALACINHHSLKNANGPYPYTLKLCFS 516
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Yeast
Match: MSL1 (U2B component of U2 snRNP; involved in splicing, binds the U2 snRNA stem-loop IV in vitro but requires association of Lea1p for in vivo binding; does not contain the conserved C-terminal RNA binding domain found in other family members [Source:SGD;Acc:S000001448]) HSP 1 Score: 45.4394 bits (106), Expect = 1.294e-6 Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 3 Query: 1056 LIVSNLNEAKIHPDAL----FKLFGCYGDVTRVKIMYNR-KNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHD 1277 L VS LNE KI+ L F LF +G+V +V + + + + A I T + A A LNG +GKPL V FSK + Sbjct: 30 LYVSQLNE-KINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSE 107
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Nematostella
Match: EDO43995 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXA3]) HSP 1 Score: 165.622 bits (418), Expect = 6.257e-45 Identity = 91/200 (45.50%), Postives = 132/200 (66.00%), Query Frame = 3 Query: 1047 SPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGS-NLRVSFSK 1643 SPL++VSNLNE I DALF LFGCYGDV RVKI++N+K+TAL+QFA AQ A+ LNGV ++GK + V SKH +S P G + T D Y +S LHRFK+ S+N NI+ PS+ LH++ + + V+EE++ ++F D V R F +KMA + +++ E AI+ALI++H+Y + + +LRVSF++ Sbjct: 277 SPLVLVSNLNEEMISCDALFTLFGCYGDVQRVKILFNKKDTALVQFANVHQAQTAIGHLNGVRVFGKEMKVTNSKHTSVS--LPKEGEDTNLTKD-----YMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCG-DVADFR-FLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFAR 467 HSP 2 Score: 117.087 bits (292), Expect = 5.453e-28 Identity = 66/218 (30.28%), Postives = 119/218 (54.59%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICD--------SMAKEQA---GPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVR 740 SKVLH+R++ + T+ EI ++ P+G ++ +++ + QA LEM+TKE A + Y P +R ++ +IQYS+H L +T+ S H +S+++ +A E G +LR++V++ + IT L +IF YG + +IVI+ Q +Q+S+ A+ AK +G ++ CC LR+++S ++L + +D RD+ R Sbjct: 2 SKVLHLRNVAAEATDAEIIALGIPYGRVTNVLMLKGKNQAFLEMKTKENAMALMNSYSYIPPSIRGRQIYIQYSNHQEL-TTNESQHSPGVRGLSSSHLGAGIGSLTSGLGIAGELPSVNGCILRIIVENMLY-PITIEVLNQIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYNGCCTLRIDYSKLKTLSVKYNNDKTRDYTR 217
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Nematostella
Match: EDO26232 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TCJ0]) HSP 1 Score: 90.8929 bits (224), Expect = 1.203e-21 Identity = 55/147 (37.41%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 1209 ALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGS-NLRVSFSKQ 1646 A+ LNGV ++GK + V SKH +S P G + T D Y +S LHRFK+ S+N NI+ PS+ LH++ + + V+EE++ ++F D V R F +KMA + +++ E AI+ALI++H+Y + + +LRVSF++ Sbjct: 1 AIGHLNGVRVFGKEMKVTNSKHTSVS--LPKEGEDTNLTKD-----YMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCG-DVADFR-FLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFARS 138
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Nematostella
Match: EDO35537 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLA1]) HSP 1 Score: 81.6481 bits (200), Expect = 8.095e-18 Identity = 55/208 (26.44%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 114 PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNR-QSLDISREDDLVRDF 734 PPS+V+H R++ D E ++ + PFG I+Y+ L K QAL+E E+ E A + Y Q + ++ F+ YS ++ D ++ ++ A + + I +L +++ + + LH KI G + RIVI+ G+ + SA+ A A+ NG ++ CC L++++S + + L++ + DD D+ Sbjct: 4 PPSRVIHCRAVADGCKETDLIQVLQPFGTITYVTLLPKIRQALVEFESLESAIAVVTYSQTSPLTVLGRQMFVNYSKSQEIKR-DKVLNGDSNGACAEASNI-----------LLLTIINPLHPINVKILH--KICSPSGKVLRIVIFHKNGL--------QALSAERALAVLNGQDIYAGCCTLKIDYSKKAKKLNVFKNDDETWDY 189
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Nematostella
Match: EDO39119 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAW4]) HSP 1 Score: 82.0333 bits (201), Expect = 1.613e-16 Identity = 54/200 (27.00%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 1053 LLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDI-EALFTDNKFRVKKIRVFNSSGK---KMALVELSSVESAIEALIELHDYDLCGSNLRVSFS 1640 +++V L++ K++ D LF L CYG+V ++K + + TA+ + ++ L+ + L+ + L +FSK D + A + + G + +++SK +RF A + + + ++ P KVLH D +EE I E K I++F+ SG L+E SV A+EAL+ + Y + S + F+ Sbjct: 305 VIMVYGLDKDKMNCDRLFNLLCCYGNVIKIKFLLGKPGTAMAELHEHVACNTVMENLSKMTLFDQQLEFSFSKQDYLVEPANVPNLPD---GSPSFKSFDNSKNNRFTSATASSKNRVFTPMKVLHFFNAPVDCTEEQIREMCQVCGVAPPKTIKMFSPSGNARTSSGLIEWESVTQALEALVMCNHYVIRNSTAKTIFT 501 HSP 2 Score: 60.077 bits (144), Expect = 1.685e-9 Identity = 51/213 (23.94%), Postives = 98/213 (46.01%), Query Frame = 3 Query: 117 PSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPF----SAKVAKALTNGLCVFPRCCVLRVNFSN-RQSLDISREDDLVRDFVR 740 PS+V+HVR + D+ E ++ + +G+IS + + K QAL+E E A T+ Q +P + R Y+++ + ++H +E Q +L + + + + T++ L IF G+++RIVI+ G+ Q ++ S F +A+ AK NG ++ C L++ Q L++ + D D+ + Sbjct: 46 PSRVVHVRGVADEAREQDLMQCLSQYGNISCITMMPKIRQALVEFEEIACANTLVNQTQMGNPVILCGR--PAYANYSKSKQISRNVHVRSET---------------QPNKILLITIINPQYVVTTDI-LHTIFSKQGMVQRIVIFRKSGL-QAMVEESR-FDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYTQ 238
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:NCBI gene;Acc:101156726]) HSP 1 Score: 290.041 bits (741), Expect = 1.024e-90 Identity = 182/531 (34.27%), Postives = 287/531 (54.05%), Query Frame = 3 Query: 75 SDNEENKKIR-REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE-NAVSTT----NQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 S ++KK+R E PS+V+H+R LP + + E+ ++ PFG ++ ++ R QA LEM T+E A TM YY PH+RN ++Q+S+H L++ +S +A AVS +++ D +A + PVLR+++D+ + ++ L +IF +G + +I+ + Q +QYS+P A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P + R DP + AA D+ PLL I G L+ + R G+ G +L+ SNLNE + P +LF LFG YGDV RVKI+YN+K++ALIQ AQ A+ LNG +YGK + V SKH ++ P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ ++ DV+EED+ LF++ VK + F +KMAL+++S+VE AI+ALI+LH+Y++ G+N LRVSFSK Sbjct: 36 STGSDSKKLRVEEALPSRVIHIRRLPTEAMDAEVIALGLPFGKVTNILTLRGKNQAFLEMGTEEAAITMVNYYNTVPPHVRNSPVYVQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAA-SSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYSR-PELPAG-----------------------DSRPTLDP-----------SVAAALSKDSTPLLCKIP----GALNPLSAAAAAAAAAGRVALPGQAGSGG----VLLASNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMCDPSQAQLAMSHLNGQKMYGKIIRVTLSKHQSVA--LPRDGLDDQG----LTKDFTNSSLHRFKKPGSKNFQNIFPPSATLHLSNVLQDVTEEDLRLLFSNTGGTVKAFKFFQD--RKMALIQMSTVEEAIQALIDLHNYNM-GANQHLRVSFSK 512
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000042697.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 278.485 bits (711), Expect = 3.042e-86 Identity = 183/542 (33.76%), Postives = 287/542 (52.95%), Query Frame = 3 Query: 75 SDNEENKKIRREI----PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGP--VLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQ-------ELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMP-LLRSI---APAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + ++ PS+VLH+R LP D+TE E+ S+ PFG ++ +++ + QA LEM ++E A+ M YY P +R + F+Q+S+H L++ +S A+ A+ + A P VLR+VV++ + ++ L +IF +G + RI+++ Q +QY+E SA+ AK +G ++ CC LR++FS +L++ +D RDF R P P E + + G GI + F ALQP+ + A +P L S+ A A GF P + H +++VSNLN ++ P LF LFG YGDV RVKI++N+K AL+Q + AQ A+ LNG L+G+PL + SKH + + P G E++ L ++Y+ S LHRFK+ S+N+SNI+ PS LH++ + V E+D++ LF+ + VK + F KMAL+++ SVE AIE LI+LH++DL G N LRVSFSK Sbjct: 5 ANGNDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVENLLYP-VSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTTLNVKYNNDKSRDFTR-PDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAF-------PPAFALQPVSSPYAGLTMSGLPGTLASLTLPAGARLGF-------PAIPAGHS----------------VVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSV--QLPREGHEDQG----LTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKD-HKMALIQMGSVEEAIECLIQLHNHDL-GENHHLRVSFSK 506
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000036879.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 278.485 bits (711), Expect = 1.051e-85 Identity = 183/542 (33.76%), Postives = 287/542 (52.95%), Query Frame = 3 Query: 75 SDNEENKKIRREI----PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGP--VLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQ-------ELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMP-LLRSI---APAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + ++ PS+VLH+R LP D+TE E+ S+ PFG ++ +++ + QA LEM ++E A+ M YY P +R + F+Q+S+H L++ +S A+ A+ + A P VLR+VV++ + ++ L +IF +G + RI+++ Q +QY+E SA+ AK +G ++ CC LR++FS +L++ +D RDF R P P E + + G GI + F ALQP+ + A +P L S+ A A GF P + H +++VSNLN ++ P LF LFG YGDV RVKI++N+K AL+Q + AQ A+ LNG L+G+PL + SKH + + P G E++ L ++Y+ S LHRFK+ S+N+SNI+ PS LH++ + V E+D++ LF+ + VK + F KMAL+++ SVE AIE LI+LH++DL G N LRVSFSK Sbjct: 58 ANGNDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVENLLYP-VSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTTLNVKYNNDKSRDFTR-PDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAF-------PPAFALQPVSSPYAGLTMSGLPGTLASLTLPAGARLGF-------PAIPAGHS----------------VVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSV--QLPREGHEDQG----LTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKD-HKMALIQMGSVEEAIECLIQLHNHDL-GENHHLRVSFSK 559
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:NCBI gene;Acc:101156726]) HSP 1 Score: 266.929 bits (681), Expect = 5.467e-82 Identity = 176/531 (33.15%), Postives = 280/531 (52.73%), Query Frame = 3 Query: 75 SDNEENKKIR-REIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAE-NAVSTT----NQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 S + ++KK+R E PS+V+H+R LP + + E+ ++ PFG ++ ++ R QA LEM T+E A TM YY PH+RN ++Q+S+H L++ +S +A AVS +++ D +A + PVLR+++D+ + ++ L +IF +G + +I+ + Q +QYS+P A+ AK +G ++ CC LR++FS +L++ +D RD+ R P P D+ L P + AA D+ PLL I G L+ + R G+ G +L+ SNLNE YGDV RVKI+YN+K++ALIQ AQ A+ LNG +YGK + V SKH ++ P G +++ L +++ +S LHRFK+ S+N NI+ PS LH++ ++ DV+EED+ LF++ VK + F +KMAL+++S+VE AI+ALI+LH+Y++ G+N LRVSFSK Sbjct: 30 SPSSDSKKLRVEEALPSRVIHIRRLPTEAMDAEVIALGLPFGKVTNILTLRGKNQAFLEMGTEEAAITMVNYYNTVPPHVRNSPVYVQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAA-SSPVLRIIIDNMFYPVTLDV-LQQIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYSR-PELPAG--------------------------------DSRPTLDP--SVAAALSKDSTPLLCKIP----GALNPLSAAAAAAAAAGRVALPGQAGSGG----VLLASNLNEE----------VRVYGDVQRVKILYNKKDSALIQMCDPSQAQLAMSHLNGQKMYGKIIRVTLSKHQSVA--LPRDGLDDQG----LTKDFTNSSLHRFKKPGSKNFQNIFPPSATLHLSNVLQDVTEEDLRLLFSNTGGTVKAFKFFQD--RKMALIQMSTVEEAIQALIDLHNYNM-GANQHLRVSFSK 496
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000017576.2 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 259.225 bits (661), Expect = 1.159e-78 Identity = 178/543 (32.78%), Postives = 281/543 (51.75%), Query Frame = 3 Query: 75 SDNEENKKIRREI----PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGP--VLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQ-------ELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMP-LLRSI---APAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLN-EAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN--LRVSFSK 1643 ++ ++KK + ++ PS+VLH+R LP D+TE E+ S+ PFG ++ +++ + QA LEM ++E A+ M YY P +R + F+Q+S+H L++ +S A+ A+ + A P VLR+VV++ + ++ L +IF +G + RI+++ Q +QY+E SA+ AK +G ++ CC LR++FS +L++ +D RDF R P P E + + G GI + F ALQP+ + A +P L S+ A A GF P + H +++VSNLN E + YGDV RVKI++N+K AL+Q + AQ A+ LNG L+G+PL + SKH + + P G E++ L ++Y+ S LHRFK+ S+N+SNI+ PS LH++ + V E+D++ LF+ + VK + F KMAL+++ SVE AIE LI+LH++DL G N LRVSFSK Sbjct: 34 ANGNDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVENLLYP-VSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTTLNVKYNNDKSRDFTR-PDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAF-------PPAFALQPVSSPYAGLTMSGLPGTLASLTLPAGARLGF-------PAIPAGHS----------------VVLVSNLNAECGTIMKRFLTCWCVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSV--QLPREGHEDQG----LTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKD-HKMALIQMGSVEEAIECLIQLHNHDL-GENHHLRVSFSK 536
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Match: SMESG000019377.1 (SMESG000019377.1) HSP 1 Score: 1121.3 bits (2899), Expect = 0.000e+0 Identity = 540/541 (99.82%), Postives = 541/541 (100.00%), Query Frame = 3 Query: 33 MMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN 1655 MMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFAT+EHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN Sbjct: 1 MMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATEEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN 541
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Match: SMESG000019377.1 (SMESG000019377.1) HSP 1 Score: 1118.61 bits (2892), Expect = 0.000e+0 Identity = 539/540 (99.81%), Postives = 540/540 (100.00%), Query Frame = 3 Query: 36 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN 1655 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFAT+EHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN Sbjct: 1 MKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATEEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYLN 540
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Match: SMESG000022463.1 (SMESG000022463.1) HSP 1 Score: 405.601 bits (1041), Expect = 4.600e-135 Identity = 230/531 (43.31%), Postives = 325/531 (61.21%), Query Frame = 3 Query: 120 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNI-HVNIGGGIP-------KETERFRDIREFRELRD----PIDTLAALQPLLTHAATHPDDAMPLLRSIAPAIRGFLDSQDLLP---REISRHD-RNDNFGRTHFGEKT----SPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYL 1652 S+VLH+R++ DVTE +IA++A PFG ISY+VLTRKTGQAL+EM +E A+ M +YY + PH K IQ+S + TL + S MHPEAE AV N+ + + + VL + +++W ++ +LH +K+FQ YG + RI+++V Q I++ +A VAK G F V R+ FS R+SLDI E D RD+ PV EL +I N G+ + + R+ + + + LA LQPLL A+ +P+D +P+L+S+AP + L+ + RE SR + N+N T K+ + ++IV+NLNE +I PDALF LFG YGDV RVKI+YN+KNTALIQF EHA RA+ LN VNLYGKP+ VNFSKH IS P EE L+++Y++S+LHRFKRA SR NIY P VLH+AGL + EE+I+ LF D + + K+++ N + +KMALV+L +++ AI+ALI+LHD D+ S LRVSFSK ++ Sbjct: 25 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL--SGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPV-RIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTAAEALAMLQPLLQQASNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKP-----EEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFI 545
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 259.225 bits (661), Expect = 8.652e-79 Identity = 178/552 (32.25%), Postives = 289/552 (52.36%), Query Frame = 3 Query: 66 EDISDN---EENKKIRREI----PPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTL--QSTDSSMHPEAENAVSTTNQICDSMAKEQAGP--VLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQELKNIHVN------IGGGIPKETERFRDIREFRELRDPIDTLAA-----LQPLLTHAATHPDDAMPLL--RSIAPAIRGFLDSQDLLPREISRHDRNDNFGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSN-LRVSFSK 1643 +D S N +KK++ E PS+V+H+R++P +V + +A +A PFG+I +V RK QAL++M A M +Y+ ++ P + K FIQ+S H L ++ +S++ ++A + A G +LR+++D+ + I +L +KIF +G + RIV + G ++++ S+ VA+ NG + C +R++FS N L + R+ D VRD++ P++ EL+ + G R D + + + +A+ L P AA A + R+ + GF +Q +N F E + +++V+NLN K +PDALF LFG YGDV RVK+M+N+KNTAL+QFA + A A++ L+ L+GK +H++ SK + I + P+ + T D Y++S LHRFK+ S+N+ NI+ PS V+H++ + SE D+ + + VKK + F + KKMAL+EL+SVE AI LIE H+ L N LR+SFSK Sbjct: 2 DDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMSNITAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQS----------QNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVI--QLPMEDANHGLTKD-----YSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFK-FLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSK 535
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Match: SMESG000033951.1 (SMESG000033951.1) HSP 1 Score: 250.366 bits (638), Expect = 1.891e-74 Identity = 179/553 (32.37%), Postives = 280/553 (50.63%), Query Frame = 3 Query: 78 DNEENKKIRRE----IPPSKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQ------STDSSMHPEAENAVSTTNQ-ICDSMAKEQAGP--VLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFS-NRQSLDISREDDLVRDFVRHPVSPQELKNIHVNIGGGIPKETERFRDIREFRELRDPIDTLAALQ--PLLTHAATHP--DDAMP--LLRSIAPAI--RGFLDSQDLLPREISRHDRNDN--------FGRTHFGEKTSPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATDEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLC-GSNLRVSFSK 1643 D+ E+KK + E PSKVLH+R++ E +++ +A PFG I MV +KT QALLE+E A MF+YY R+ P + +QYS H +L+ + D+S+ +A N ++ ++ I D + E +LR+V+++ + I +L + K+FQ +G + RI+I+ Q ++ SA V+ NG +F CC L++ FS N SL I R++D RD+ P+ E ++H F D + P +L PLL P D +P L ++ P + F S +P + D N + S +++VSNLN K++ D++F LFG YGDV++V I AL+ T+ A+ A + LN V L+GK + + ++ + E D+ + + ++ LHRFK+ S+NH NIY PS VLH++ + EED+ LF DN F+ +R+F KKMAL +++S+E AI ALI LH++ L S+LRVSFSK Sbjct: 105 DSNESKKSKLEPSTNTEPSKVLHIRNIASRAQESDLSLLAVPFGKIRSMVYAKKTNQALLELEKASEATRMFDYYTRYPPCFNGREMIVQYSKHVSLELKLKNSNIDASV--DAANKMNEKHRSIVDEWSSENKSDRRILRVVIENLKNYNINHLVILKVFQRFGKVLRIIIFTKNMQCQCLVELDNSISAHVSLLHLNGQDLFNDCCRLKIEFSKNTDSLQIQRQNDKCRDYTVSPLQEDEQFSLH-------------FLDWQAKSVSTVPPQQYPSLSTVPLLQTQVQKPLYSDFLPNNLFYTVMPNVFKSTFQPSPVAIPESLLISDCAINPLYQEPIVKPPSSANAIDSSIILVSNLNYEKVNTDSIFTLFGVYGDVSKVCISPPSVGAALVYMQTNSQAETACRHLNLVPLFGKIISTYLLPGEIVAQ----SIFNTELNSDIEVKHFTNTPLHRFKKPNSKNHFNIYPPSSVLHLSNIPLSFKEEDLLTLFHDNGFQCSSLRIF-QKDKKMALAKMTSLEDAISALISLHNWKLTDSSHLRVSFSK 637 The following BLAST results are available for this feature:
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Polypyrimidine tract binding protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Polypyrimidine tract binding protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30004929 ID=SMED30004929|Name=Polypyrimidine tract binding protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1803bpback to top protein sequence of SMED30004929-orf-1 >SMED30004929-orf-1 ID=SMED30004929-orf-1|Name=SMED30004929-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=542bp MMKRKLDVKVEEDISDNEENKKIRREIPPSKVLHVRSLPDDVTEMEIASIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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