Ras-like GTP-binding protein YPT1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30004913 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Match: RAB1A (RAB1A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9758]) HSP 1 Score: 199.519 bits (506), Expect = 1.508e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Match: RAB1A (RAB1A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9758]) HSP 1 Score: 199.519 bits (506), Expect = 1.508e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Match: RAB1B (RAB1B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18370]) HSP 1 Score: 196.052 bits (497), Expect = 3.038e-63 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Match: AL358472.6 (novel protein) HSP 1 Score: 182.185 bits (461), Expect = 9.163e-58 Identity = 82/168 (48.81%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV--NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 YD L K++++GD GVGK+ L+ RFA+D FN +YI T+G+DFK+RT+ I K+K+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ +F+N+ W+K + N S GV +RLL+GNK D+ KR V E A + A ++ ++F ETSAK+S NV+EAF SL I+ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGV--ERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Match: RAB13 (RAB13, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9762]) HSP 1 Score: 182.185 bits (461), Expect = 9.163e-58 Identity = 82/168 (48.81%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV--NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 YD L K++++GD GVGK+ L+ RFA+D FN +YI T+G+DFK+RT+ I K+K+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ +F+N+ W+K + N S GV +RLL+GNK D+ KR V E A + A ++ ++F ETSAK+S NV+EAF SL I+ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGV--ERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Match: rab-1 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q9UAQ6]) HSP 1 Score: 206.838 bits (525), Expect = 7.659e-68 Identity = 99/205 (48.29%), Postives = 144/205 (70.24%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNI--SSQYQTVRLEEYRK-QDDNNKYCC 614 M+ +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ TF NV W++E++R +LLVGNK DL+ KRAV T+ A+++A Q + F+ETSAK+S NVE+AF ++ I + + + VR+ + QD + CC Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAPGVRITGSQPVQDKKSGGCC 205
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Match: rab-35 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q9U2C3]) HSP 1 Score: 175.252 bits (443), Expect = 2.559e-55 Identity = 87/188 (46.28%), Postives = 131/188 (69.68%), Query Frame = 3 Query: 12 MSEINHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV-NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAF---FSLVDTIVTLTPNISSQYQT 563 M+ YD L K++I+GD GVGKSSLL RFAD+TF+E+YI T+GVDFK+RT+ IN +VK+QIWDTAG E++ ++TS++YRG+HG+++VY++ + +F NV W++E+ N V +++LVGNK + +++R V A+ +A+ + F ETSAK +NVE F SLV T P +S+ Q+ Sbjct: 1 MAGTRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSV--QKVLVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLANPQSASKDQS 186
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Match: rab-8 (RAB family; Rab8 [Source:UniProtKB/TrEMBL;Acc:G5EFC1]) HSP 1 Score: 174.866 bits (442), Expect = 3.936e-55 Identity = 72/165 (43.64%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF+DD+FN S+I T+G+DFK+RTI+++ K+K+QIWDTAG E++ ++T+++YRG+ GII+VY++ ++ +F+N+ WI+ + +R+++GNK D+ ++R VS + ++ A + +F+ETSAK + N++EAFF+L I Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Match: rab-8 (RAB family; Rab8 [Source:UniProtKB/TrEMBL;Acc:G5EFC1]) HSP 1 Score: 174.866 bits (442), Expect = 3.936e-55 Identity = 72/165 (43.64%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF+DD+FN S+I T+G+DFK+RTI+++ K+K+QIWDTAG E++ ++T+++YRG+ GII+VY++ ++ +F+N+ WI+ + +R+++GNK D+ ++R VS + ++ A + +F+ETSAK + N++EAFF+L I Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Match: rab-10 (Ras-related protein Rab-10 [Source:UniProtKB/Swiss-Prot;Acc:Q94148]) HSP 1 Score: 174.096 bits (440), Expect = 5.754e-55 Identity = 74/196 (37.76%), Postives = 135/196 (68.88%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQ--TVRLEEYRKQDDNNKYC 611 YD+L K++++GD GVGK+ +L RF+DD FN ++I T+G+DFK++TI++ K+K+QIWDTAG E++ ++T+S+YRG+ GI++VY++ + +F N++ W++ ++ ++++GNK D+SD+R VS E ++ A+ + + F ETSAK + +V+ AF+ L + I+ P+ + + TV + ++Q + C Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDEQSRDTVNPVQPQRQSSSGGCC 201
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Match: Rab1 (gene:FBgn0285937 transcript:FBtr0084104) HSP 1 Score: 201.06 bits (510), Expect = 1.868e-65 Identity = 96/205 (46.83%), Postives = 140/205 (68.29%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI---VTLTPNISSQYQTVRLEEYRKQDDNNKYCC 614 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY+ DQ +F NV W++E+ R +LLVGNK DL+ K+ V TA E+A Q + F+ETSAK++ NVE+AF ++ I V + + V++++ R ++ CC Sbjct: 1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKSGCC 205
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0333549) HSP 1 Score: 183.341 bits (464), Expect = 1.466e-58 Identity = 92/198 (46.46%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSL----VDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYC 611 +D L K++I+GD GVGKSSLL RF+DDTF+ SYI T+GVDFK+RT+ I +VK+QIWDTAG E++ ++TS++YRG+HG+I+VY++ + +F NV W++E+ + V K++LVGNK D D++ V TE A+ FA+Q +++ ETSAK + NVE F S+ +D + +PN Q T+ L+ K K C Sbjct: 5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVV-KKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN-EQQKDTLHLKPNPKGSKGGKCC 200
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0303258) HSP 1 Score: 183.341 bits (464), Expect = 1.466e-58 Identity = 92/198 (46.46%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSL----VDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYC 611 +D L K++I+GD GVGKSSLL RF+DDTF+ SYI T+GVDFK+RT+ I +VK+QIWDTAG E++ ++TS++YRG+HG+I+VY++ + +F NV W++E+ + V K++LVGNK D D++ V TE A+ FA+Q +++ ETSAK + NVE F S+ +D + +PN Q T+ L+ K K C Sbjct: 5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVV-KKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN-EQQKDTLHLKPNPKGSKGGKCC 200
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Match: Rab35 (gene:FBgn0031090 transcript:FBtr0070028) HSP 1 Score: 183.341 bits (464), Expect = 1.466e-58 Identity = 92/198 (46.46%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSL----VDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYC 611 +D L K++I+GD GVGKSSLL RF+DDTF+ SYI T+GVDFK+RT+ I +VK+QIWDTAG E++ ++TS++YRG+HG+I+VY++ + +F NV W++E+ + V K++LVGNK D D++ V TE A+ FA+Q +++ ETSAK + NVE F S+ +D + +PN Q T+ L+ K K C Sbjct: 5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVV-KKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN-EQQKDTLHLKPNPKGSKGGKCC 200
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Match: Rab8 (gene:FBgn0262518 transcript:FBtr0308833) HSP 1 Score: 176.792 bits (447), Expect = 7.671e-56 Identity = 74/165 (44.85%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF++D FN ++I T+G+DFK+RTI+++ K+K+QIWDTAG E++ ++T+++YRG+ GI++VY++ + +F+N+ WI+ + + +++L+GNK +L+DKR VS E ++ A + ++F+ETSAK S NVEEAF +L I Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Match: rab1aa (RAB1A, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-090312-110]) HSP 1 Score: 199.134 bits (505), Expect = 1.197e-64 Identity = 89/166 (53.61%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V AKEFA+ + F+ETSAK+S NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTAAKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Match: rab1ab (RAB1A, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-030616-564]) HSP 1 Score: 198.749 bits (504), Expect = 1.793e-64 Identity = 89/166 (53.61%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Match: rab1ba (zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]) HSP 1 Score: 197.593 bits (501), Expect = 5.759e-64 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Match: rab1bb (RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]) HSP 1 Score: 197.208 bits (500), Expect = 7.163e-64 Identity = 93/198 (46.97%), Postives = 137/198 (69.19%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVT-LTPNIS--SQYQTVRLEEYRKQDDNNKYC 611 YD L K++++GD GVGKS +L RFADDT+ ES+I T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W+KE++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ + I + P S S+ +++E Q C Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSEKPDLKIESTPVQQSGGGCC 201
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Match: rab1bb (RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]) HSP 1 Score: 197.208 bits (500), Expect = 7.163e-64 Identity = 93/198 (46.97%), Postives = 137/198 (69.19%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVT-LTPNIS--SQYQTVRLEEYRKQDDNNKYC 611 YD L K++++GD GVGKS +L RFADDT+ ES+I T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W+KE++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ + I + P S S+ +++E Q C Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSEKPDLKIESTPVQQSGGGCC 201
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Match: rab1a (RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:448007]) HSP 1 Score: 201.06 bits (510), Expect = 3.819e-65 Identity = 92/172 (53.49%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Match: rab1a (RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:448007]) HSP 1 Score: 196.438 bits (498), Expect = 2.864e-63 Identity = 88/164 (53.66%), Postives = 124/164 (75.61%), Query Frame = 3 Query: 33 DILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 D L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 173
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Match: maf (v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:Xenbase;Acc:XB-GENE-6053271]) HSP 1 Score: 181.415 bits (459), Expect = 1.906e-57 Identity = 86/166 (51.81%), Postives = 124/166 (74.70%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 YD L K++I+GD GVGKSSLL RFAD+TF+ SYI T+GVDFK+RT++IN KVK+QIWDTAG E++ ++TS++YRG+HG+I+VY++ +F NV W+ E+N++ R+LVGNK D +++ V TE A +FA Q ++Q ETSAK + NVEE F + + ++ Sbjct: 5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVL 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Match: pknox2 (PBX/knotted 1 homeobox 2 [Source:Xenbase;Acc:XB-GENE-853128]) HSP 1 Score: 180.644 bits (457), Expect = 5.309e-57 Identity = 77/167 (46.11%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVT 530 YD L K++++GD GVGK+ LL RF++D FN ++I T+G+DFK+RTI+++ K+K+QIWDTAG E++ ++T+++YRG+ GI++VY++ ++ +F N+ WI+ + +R+++GNK D++DKR VS E ++ A ++F+ETSAK+S NVEEAFF+L I+T Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMT 171
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Match: rab1a (RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:448007]) HSP 1 Score: 174.866 bits (442), Expect = 5.216e-55 Identity = 79/148 (53.38%), Postives = 111/148 (75.00%), Query Frame = 3 Query: 81 SSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 S LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 13 SCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 160
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Match: Rab1a (RAB1A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97842]) HSP 1 Score: 199.519 bits (506), Expect = 1.035e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Match: Rab1a (RAB1A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97842]) HSP 1 Score: 197.208 bits (500), Expect = 7.807e-64 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Match: Rab1b (RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]) HSP 1 Score: 196.438 bits (498), Expect = 1.751e-63 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Match: Rab1b (RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]) HSP 1 Score: 193.356 bits (490), Expect = 1.567e-61 Identity = 87/164 (53.05%), Postives = 124/164 (75.61%), Query Frame = 3 Query: 33 DILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 D L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 69 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 232
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Match: Rab13 (RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232]) HSP 1 Score: 181.415 bits (459), Expect = 1.265e-57 Identity = 87/197 (44.16%), Postives = 133/197 (67.51%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV--NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYCC 614 YD L K++++GD GVGK+ L+ RFA+D FN +YI T+G+DFK+RT+ I ++K+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ +F+N+ W+K + N S GV +RLL+GNK D+ KR V E A++ A ++ ++F ETSAK+S NV+EAF SL I+ T S + K D K C Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGV--ERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLKTSDKKKNKC 199
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Match: sp|Q01890|YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans OX=4787 GN=YPT1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.469e-65 Identity = 92/166 (55.42%), Postives = 126/166 (75.90%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W+ E++R +LLVGNK DL+ KR VST+ AKEFAE ++F+ETSAK + NVE+AF + I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Match: sp|Q05974|RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis OX=6523 GN=RAB1A PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 4.890e-64 Identity = 98/205 (47.80%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 12 MSEINH-YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNI---SSQYQTVRLEEYRKQDDNNKYCC 614 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKE+A+Q + F+ETSAK + NVE+AF ++ I I S +V++ N CC Sbjct: 1 MSTMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Match: sp|Q52NJ2|RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa OX=9823 GN=RAB1A PE=2 SV=3) HSP 1 Score: 199.904 bits (507), Expect = 5.822e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Match: sp|Q6NYB7|RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 7.241e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Match: sp|P62821|RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus OX=10090 GN=Rab1A PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 7.241e-64 Identity = 91/172 (52.91%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE++F ++ I Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Match: M2X9H6 (Rab family, other OS=Galdieria sulphuraria OX=130081 GN=Gasu_58900 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.712e-65 Identity = 100/178 (56.18%), Postives = 135/178 (75.84%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQT 563 YD L K++++GD GVGKS LL RFADDT+NESYI T+GVDFK+RTI+++ VK+QIWDTAG E++ ++TSS+YRG+HGIIIVY++ DQ +F NV W+ E++R +LLVGNK DL+ K+ V T TAKEFA+ ++F+ETSAKTSENVE+AF ++ I ++SQ QT Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANESVNKLLVGNKNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEI---KERMASQPQT 179
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Match: A0A0D6LMF2 (Ras family protein OS=Ancylostoma ceylanicum OX=53326 GN=ANCCEY_12107 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.826e-65 Identity = 100/205 (48.78%), Postives = 145/205 (70.73%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNI--SSQYQTVRLEEYRK-QDDNNKYCC 614 M+ +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ KRAV T+ AKE+A+Q + F+ETSAK+S NVE+AF ++ I + + + VR+ + QD + CC Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAPAVRITGSQPVQDKKSGGCC 205
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Match: A0A2R5GFY2 (Ras-related protein Rab-1A OS=Hondaea fermentalgiana OX=2315210 GN=FCC1311_060522 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.107e-65 Identity = 97/170 (57.06%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 21 INH--YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 +NH YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGIIIVY++ DQ +F NV W++E++R + LLVGNK DL++KR VS E AKEFA+ EM+F+ETSAK S NVE+AF + I Sbjct: 1 MNHPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNVKTWLQEIDRYAAEKVNTLLVGNKSDLTNKRVVSYEAAKEFADSVEMEFLETSAKNSTNVEKAFMVMASQI 170
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Match: A0A3P7XJS1 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS4064 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.423e-65 Identity = 96/164 (58.54%), Postives = 127/164 (77.44%), Query Frame = 3 Query: 33 DILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 D LLK++++GD GVGKS LL RFAD+TFNE+YI T+GVDFK+RTI +N VK+QIWDTAG E++ ++TSS+YRG+ GIIIVY++ DQ+TF NV W+ E++ RLLVGNK DL+++RAV T AKEFA++N+M FIETSAK + NVE AF + + I Sbjct: 13 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYANSTVSRLLVGNKCDLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEKI 176
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Match: A0A183LJT9 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.504e-65 Identity = 96/164 (58.54%), Postives = 127/164 (77.44%), Query Frame = 3 Query: 33 DILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 D LLK++++GD GVGKS LL RFAD+TFNE+YI T+GVDFK+RTI +N VK+QIWDTAG E++ ++TSS+YRG+ GIIIVY++ DQ+TF NV W+ E++ RLLVGNK DL+++RAV T AKEFA++N+M FIETSAK + NVE AF + + I Sbjct: 13 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYANSTVSRLLVGNKCDLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEKI 176
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Match: rab1ab (ras-related protein Rab-1A [Source:NCBI gene;Acc:103035225]) HSP 1 Score: 198.749 bits (504), Expect = 1.535e-64 Identity = 89/166 (53.61%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Match: zgc:171927 (ras-related protein ORAB-1-like [Source:NCBI gene;Acc:103045400]) HSP 1 Score: 197.978 bits (502), Expect = 3.974e-64 Identity = 93/182 (51.10%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRL 572 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ VK+QIWDTAG E++ ++TSS+YRG+HGIIIVY++ DQ +F N+ W++E++R +LLVGNK DL+ K+ V TAKEFAE ++ F+E+SAK + NVE+AF ++ I + + Q +TV++ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMDGKIVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNLKQWLEEIDRYACENVSKLLVGNKSDLTSKKVVDFTTAKEFAEPLKIPFLESSAKNASNVEKAFLTMASEIQKRLGSENVQNETVKV 185
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Match: ENSAMXT00000045110.1 (ras-related protein Rab-1A [Source:NCBI gene;Acc:103028654]) HSP 1 Score: 196.052 bits (497), Expect = 1.865e-63 Identity = 87/166 (52.41%), Postives = 124/166 (74.70%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +L+VGNK DL+ K+ V TAKEFA+ + F+E SAK + NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLMVGNKCDLTTKKVVDYTTAKEFADSLGIPFLEASAKNATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Match: rab1ba (zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]) HSP 1 Score: 196.052 bits (497), Expect = 3.859e-63 Identity = 87/165 (52.73%), Postives = 125/165 (75.76%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 +D L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ ++ NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I Sbjct: 26 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI 190
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Match: rab13 (RAB13, member RAS oncogene family [Source:NCBI gene;Acc:103044636]) HSP 1 Score: 182.185 bits (461), Expect = 5.057e-58 Identity = 77/167 (46.11%), Postives = 123/167 (73.65%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 YD L K++++GD GVGK+ L+ RFA+D FN +YI T+G+DFK++TI++ KVK+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ +F+N+ W+K + + R+L+GNK D+ KR VS E ++ A+ + ++F ETSAK+S NVEE+F SL I+ Sbjct: 4 KYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKEMGEKLAKDHGIRFFETSAKSSINVEESFMSLARDIL 170
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Match: rab1aa (RAB1A, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-090312-110]) HSP 1 Score: 203.371 bits (516), Expect = 6.185e-67 Identity = 93/172 (54.07%), Postives = 130/172 (75.58%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ E+ F+ETSAK + NVE+AF ++ I Sbjct: 1 MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLEIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Match: rab8a (RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]) HSP 1 Score: 173.326 bits (438), Expect = 3.412e-55 Identity = 71/165 (43.03%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF++D FN ++I T+G+DFK+RTI ++ K+K+QIWDTAG E++ ++T+++YRG+ GI++VY++ ++ +F+N+ WI+ + +++++GNK D++++R V+ E ++ A + ++F+ETSAK S NVEEAFF+L I Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMILGNKCDMNERRQVTRERGEKLAIEYGIKFMETSAKASINVEEAFFTLARDI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Match: rab3c (RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]) HSP 1 Score: 159.844 bits (403), Expect = 1.342e-49 Identity = 69/167 (41.32%), Postives = 118/167 (70.66%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 ++D + K++I+G+ VGK+S L R+AD++F +++ T+G+DFK++T+ NE ++K+QIWDTAG E+Y ++T+++YRG+ G I++Y++ ++++F VS W ++ + + +LVGNK D+ D R V TE ++ AEQ +F ETSAK + NV++ F LVD I Sbjct: 25 NFDYMFKLLIIGNSSVGKTSFLFRYADESFTSAFVSTVGIDFKVKTVYRNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVSDWSTQIKTYSWDNAQVVLVGNKCDMEDDRMVPTEQGRQLAEQLGFEFFETSAKDNINVKQTFERLVDVIC 191
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Match: rab30 (RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250]) HSP 1 Score: 158.688 bits (400), Expect = 2.333e-49 Identity = 67/161 (41.61%), Postives = 110/161 (68.32%), Query Frame = 3 Query: 33 DILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLV 515 D+L KI+++G+ GVGK+ L+ RF F T+GVDF ++T++++ +K+K+QIWDTAG E++ S+T S+YR +H +++ Y++ + TF + W++E+ + R+LVGNKLDL+D R V+ E A+ FA + ++++ETSAK +ENVE F L Sbjct: 7 DLLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGTKIKLQIWDTAGQERFRSITQSYYRSAHALVLTYDVSSEETFACLPAWLREMEQHASAHVPRVLVGNKLDLADVRQVTREQAEAFARLHGLRYLETSAKEAENVERLFVELA 167
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Match: rab8a (RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]) HSP 1 Score: 155.221 bits (391), Expect = 5.611e-48 Identity = 69/167 (41.32%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLR--TIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF++D FN ++I T+G + I+I+ K+K+QIWDTAG E++ ++T+++YRG+ G ++VY++ ++ +F+N+ WI+ + ++ +VGNK D++D+R V+ + ++ AE +QF+ETSAK S NVEEAFF+L I Sbjct: 5 YDCLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGGSRPVCQVCIRIDLKKIKLQIWDTAGQERFRTITTAYYRGAMGSMLVYDITNEKSFENIKNWIRNIEEHASADVQK-MVGNKCDMNDRRQVTKDRGEKLAEDYNIQFMETSAKASINVEEAFFTLAREI 170
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Match: YPT1 (Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]) HSP 1 Score: 195.667 bits (496), Expect = 3.976e-64 Identity = 88/167 (52.69%), Postives = 124/167 (74.25%), Query Frame = 3 Query: 24 NHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 + YD L K++++G+ GVGKS LL RF+DDT+ YI T+GVDFK++T++++ VK+QIWDTAG E++ ++TSS+YRGSHGIIIVY++ DQ +F V W++E++R +LLVGNK DL DKR V + AKEFA+ N+M F+ETSA S NVE+AF ++ I Sbjct: 3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Match: SEC4 (Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]) HSP 1 Score: 171.014 bits (432), Expect = 2.526e-54 Identity = 78/165 (47.27%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD ++KI+++GD GVGKS LL RF +D FN S+I T+G+DFK++T+ IN KVK+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ TF N+ W K VN + LLVGNK D+ + R V+ + + A++ + FIE+SAK +NV E FF+L I Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Match: YPT31 (Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]) HSP 1 Score: 165.236 bits (417), Expect = 6.418e-52 Identity = 76/165 (46.06%), Postives = 119/165 (72.12%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD+L KI+++GD GVGKS+LL+RF + FN T+GV+F RT++I+ ++K QIWDTAG E+Y ++TS++YRG+ G +IVY++ ++++N ++W+ E+ + L+GNK DL+ RAV TE +K FA++N++ F ETSA SENV++AF L++TI Sbjct: 10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTI 174
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Match: YPT32 (Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]) HSP 1 Score: 161.384 bits (407), Expect = 1.632e-50 Identity = 87/213 (40.85%), Postives = 129/213 (60.56%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTL------------TPNISS----QYQTVRLEEYRKQDDNNKY--CC 614 YD L KI+++GD GVGKS+LL+RF D FN T+GV+F RTI++ K+K QIWDTAG E+Y ++TS++YRG+ G +IVY++ ++++N ++W+ E+ + L+GNK DL+ RAV T+ AK FA +N+M F ETSA S+NV++AF L+ I + T N+ S + T+ L K+D K CC Sbjct: 10 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Match: YPT6 (Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]) HSP 1 Score: 123.25 bits (308), Expect = 1.241e-35 Identity = 64/155 (41.29%), Postives = 102/155 (65.81%), Query Frame = 3 Query: 45 KIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRL-LVGNKLDLSDKRAVSTETAKEFAEQNEMQ-FIETSAKTSENVEEAF 503 KI+ +G+ GVGK+SL+ RF DTF++ Y T+G+DF +T+ +++ +++Q+WDTAG E++ SL S+ R S IIVY++ + +F+ + WI++V G N L +VGNK DLSD+R +STE ++ A+ + F+ETS K NV+ F Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALF 166
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Match: EDO40167 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S806]) HSP 1 Score: 200.675 bits (509), Expect = 1.149e-65 Identity = 96/205 (46.83%), Postives = 137/205 (66.83%), Query Frame = 3 Query: 12 MSEIN-HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI---VTLTPNISSQYQTVRLEEYRKQDDNNKYCC 614 MS +N YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKE+AE + F+ETSAK + NVE+AF ++ I + +P V++ CC Sbjct: 1 MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQGAGSNVKINSSTPVKQGGGGCC 205
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Match: EDO42144 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2G3]) HSP 1 Score: 182.185 bits (461), Expect = 2.244e-58 Identity = 83/164 (50.61%), Postives = 121/164 (73.78%), Query Frame = 3 Query: 24 NHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLV 515 + YD L K++++GD GVGKSSLL RFADDTF+ +YI T+GVDFK+RT+ ++ +K+QIWDTAG E++ +LT+++YR +HGI+++Y++ + TF ++S W++EV+ +LVGNK DL D R V TAKEFAE+ ++ FIETSAK S NVE F ++ Sbjct: 3 SEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMA 166
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Match: EDO47471 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMA6]) HSP 1 Score: 177.178 bits (448), Expect = 1.915e-56 Identity = 78/195 (40.00%), Postives = 133/195 (68.21%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYCC 614 YD L K++++GD GVGK+ +L RF+DD FN ++I T+G+DFK++TI++ K+K+QIWDTAG E++ ++T+S+YRG+ GI++VY++ + TF N+S W++ + +++++GNK D+ D+R VS E ++ A ++ ++F+ETSAKT+ N+E+AF L I+ N S+ + + + Q D CC Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSNNIHVH-DQKDKKGGCC 199
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Match: EDO41018 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5I6]) HSP 1 Score: 176.022 bits (445), Expect = 6.336e-56 Identity = 73/165 (44.24%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGK+ +L RF++D FN ++I T+G+DFK+RTI+++ K+K+QIWDTAG E++ ++T+++YRG+ GI++VY++ + +F+N+ WI+ + +++++GNK D+ D+R VS E ++ A + ++F+ETSAK S NVEEAFF+L I Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Match: EDO43129 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZN1]) HSP 1 Score: 174.866 bits (442), Expect = 1.503e-55 Identity = 78/161 (48.45%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSL 512 YD L KI+++GD GVGKS LL RF DD+ ESY T+GVDFK++T++++ VK+QIWDTAG E++ ++TSS+YRG+HG++IVY++ + ++ N+ W+ EV +LVGNK+DL R V + A+E+A ++M F+ETSAK ++NV+EAF L Sbjct: 13 YDYLFKILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKIKTMRVDGKVVKLQIWDTAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVL 173
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Match: rab1ab (ras-related protein ORAB-1 [Source:NCBI gene;Acc:101161080]) HSP 1 Score: 198.749 bits (504), Expect = 1.525e-64 Identity = 94/199 (47.24%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVT-LTPN--ISSQYQTVRLEEYRKQDDNNKYCC 614 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ K+ V TAKEFA+ + F+ETSAK + NVE+AF ++ I + P + + V+L ++ CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATVGGEKPNVKLTPGTSVKPSSGGCC 202
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Match: rab1aa (ras-related protein Rab-1A [Source:NCBI gene;Acc:101162421]) HSP 1 Score: 198.364 bits (503), Expect = 2.115e-64 Identity = 88/166 (53.01%), Postives = 126/166 (75.90%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W++E++R +LLVGNK DL+ ++ V TAKEFA+ + F+ETSAK++ NVE+AF ++ I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Match: zgc:171927 (ras-related protein ORAB-1-like [Source:NCBI gene;Acc:101173484]) HSP 1 Score: 193.356 bits (490), Expect = 2.791e-62 Identity = 89/165 (53.94%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI ++ VK+QIWDTAG E++ ++TSS+YRG+HGIIIVY++ +Q +F NV W++E++R RLLVGNK DL K+ V TA++ A ++ F+ETSAK+S NVE+AF ++ I Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVRQWLEEIDRYACENVSRLLVGNKSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSGNVEKAFLTMASEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Match: zgc:171927 (ras-related protein ORAB-1-like [Source:NCBI gene;Acc:101173484]) HSP 1 Score: 193.356 bits (490), Expect = 2.791e-62 Identity = 89/165 (53.94%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTI 524 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI ++ VK+QIWDTAG E++ ++TSS+YRG+HGIIIVY++ +Q +F NV W++E++R RLLVGNK DL K+ V TA++ A ++ F+ETSAK+S NVE+AF ++ I Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVRQWLEEIDRYACENVSRLLVGNKSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSGNVEKAFLTMASEI 169
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Match: ENSORLT00000032751.1 (RAB13, member RAS oncogene family [Source:NCBI gene;Acc:101156603]) HSP 1 Score: 180.644 bits (457), Expect = 1.988e-57 Identity = 80/168 (47.62%), Postives = 128/168 (76.19%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEV--NRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV 527 YD L K++++GD GVGK+ L+ RFA+D +N +YI T+G+DFK++TI+++ KVK+Q+WDTAG E++ ++T+++YRG+ GII+VY++ D+ +F+N+ W+K + N S GV R+L+GNK D+ KR VS ET + A+++ ++F ETSAK+S NVEE+F +L I+ Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGV--TRMLLGNKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDIL 170
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Match: SMESG000076068.1 (SMESG000076068.1) HSP 1 Score: 413.305 bits (1061), Expect = 1.841e-149 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 3 Query: 12 MSEINHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYCC 614 MSEINHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYCC Sbjct: 1 MSEINHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEYRKQDDNNKYCC 201
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Match: SMESG000076066.1 (SMESG000076066.1) HSP 1 Score: 228.794 bits (582), Expect = 1.524e-76 Identity = 102/184 (55.43%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 30 YDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLTPNISSQYQTVRLEEY 581 YD + KI+I+GD VGK+SLL+RF DD FNE+Y+ TLGVDFKL+T+K+N+ VK+ IWDTAG E Y SLT++FYRG HG ++V++L ++ +F N+S+W+KE++++ N RLLVGNKLDL+D+R VS E AK FA+ ++Q+IETSAK+SENVEEAF +L D ++TL PN Q ++L+ + Sbjct: 6 YDFIFKIVIIGDAHVGKTSLLSRFTDDKFNENYLNTLGVDFKLKTVKVNDHVVKLNIWDTAGEELYNSLTTAFYRGCHGFVLVFSLTEKKSFTNLSHWLKEIDKNANSTNVRLLVGNKLDLNDERVVSFEQAKIFADSRKLQYIETSAKSSENVEEAFLTLADDVITLFPNSKLQNDVIKLDTH 189
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Match: SMESG000026323.1 (SMESG000026323.1) HSP 1 Score: 202.986 bits (515), Expect = 3.115e-66 Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVTLT--PNISSQYQTVRLEEYRKQDDNNKYCC 614 YD L K++++GD GVGKS LL RFADDT+ ESYI T+GVDFK+RTI+++ +K+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ++F NV W+ E++R +LLVGNK DL KR V AKE+A+ + F+ETSAK + NVE+AF ++ I + + P SSQ TV++ + + CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKNWLSEIDRYANENVNKLLVGNKTDLISKRVVEASNAKEYADSLNIPFLETSAKDATNVEQAFLTMAGEIKSRSGPPASSSQKPTVKVGSATQPVKASSGCC 201
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Match: SMESG000049854.1 (SMESG000049854.1) HSP 1 Score: 194.897 bits (494), Expect = 4.255e-63 Identity = 94/199 (47.24%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIVT-LTP--NISSQYQTVRLEEYRKQDDNNKYCC 614 YD L K++++GD GVGKS +L RFADDT+ +SYI T+GVDFK+RTI+++ VK+QIWDTAG E++ ++TSS+YRG+HGII+VY++ DQ +F NV W+ E+ R +LL+GNK D+ K+ V + TAKEFA+ + F+ETSA+ S NVE+ F ++ I L P S+Q +VR+ K ++ CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTDSYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQTSFNNVKNWLNEIERYANENVNKLLIGNKSDMVSKKVVDSGTAKEFADSLNIPFLETSARDSTNVEKTFITMAQEIKNRLGPAAAASNQRPSVRVGAATKPVKSSSGCC 202
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Match: SMESG000030620.1 (SMESG000030620.1) HSP 1 Score: 182.185 bits (461), Expect = 3.315e-58 Identity = 89/184 (48.37%), Postives = 130/184 (70.65%), Query Frame = 3 Query: 27 HYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRTIKINESKVKIQIWDTAGTEKYASLTSSFYRGSHGIIIVYNLIDQNTFQNVSYWIKEVNRSTGVRNKRLLVGNKLDLSDKRAVSTETAKEFAEQNEMQFIETSAKTSENVEEAFFSLVDTIV--TLTPNISSQYQTVRL 572 +YD LLK++++GD VGKSSLL RF DD F++SYI T+GVDFK +INE KVK+Q+WDT+G +++ ++T+S+YRGS G ++VY++ D+N+F +S W+ +N+S+ K +LVGNK D DKR ++ E K+FA NE+ F ETSAK S NV+EAF +L I+ N+S Q + +L Sbjct: 4 NYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKVYLINVSEQQKKSKL 186 The following BLAST results are available for this feature:
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Ras-like GTP-binding protein YPT1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30004913 ID=SMED30004913|Name=Ras-like GTP-binding protein YPT1|organism=Schmidtea mediterranea sexual|type=transcript|length=628bpback to top protein sequence of SMED30004913-orf-1 >SMED30004913-orf-1 ID=SMED30004913-orf-1|Name=SMED30004913-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=202bp MSEINHYDILLKIIIVGDPGVGKSSLLARFADDTFNESYIQTLGVDFKLRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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