Nuclear receptor subfamily 4 group A

Overview


Name	Nuclear receptor subfamily 4 group A
Smed ID	SMED30004876
Length (bp)	2845

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Nuclear receptor subfamily 4 group A (SMED30004876) t-SNE clustered cells

Violin plots show distribution of expression levels for Nuclear receptor subfamily 4 group A (SMED30004876) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Nuclear receptor subfamily 4 group A (SMED30004876) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Nuclear receptor subfamily 4 group A (SMED30004876) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30004876

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30004876	h1SMcG0011606	dd_Smed_v4_12229_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30004876	h1SMcG0011606	dd_Smed_v4_12229_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30004876	h1SMcG0011606	dd_Smed_v4_12229_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
head region	SMED30004876	h1SMcG0011606	dd_Smed_v6_12229_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Human
Match: NR4A1 (nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980])

HSP 1 Score: 191.43 bits (485), Expect = 5.830e-51
Identity = 133/366 (36.34%), Postives = 187/366 (51.09%), Query Frame = 1

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  223 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 538

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Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  223 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 538

[Close]

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  223 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 538

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Human
Match: NR4A1 (nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980])

HSP 1 Score: 191.43 bits (485), Expect = 7.760e-51
Identity = 133/366 (36.34%), Postives = 187/366 (51.09%), Query Frame = 1

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  236 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 551

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Human
Match: NR4A1 (nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980])

HSP 1 Score: 191.43 bits (485), Expect = 7.760e-51
Identity = 133/366 (36.34%), Postives = 187/366 (51.09%), Query Frame = 1

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  236 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 551

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Celegans
Match: nhr-6 (Nuclear hormone receptor family member nhr-6 [Source:UniProtKB/Swiss-Prot;Acc:P41829])

HSP 1 Score: 155.221 bits (391), Expect = 6.254e-40
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1

Query: 1471 TDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRI 1785
            T +     + +D +++C VC D A C HYG RTCEGCKGFFKRT+QKN++Y C  +K C +DKR R+RCQYCR+QKCL+VGMVKE+VR  S  GRRGRLSSKT++
Sbjct:  116 TSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEIVRHGSLSGRRGRLSSKTKL 220

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Query: 1471 TDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRI 1785
            T +     + +D +++C VC D A C HYG RTCEGCKGFFKRT+QKN++Y C  +K C +DKR R+RCQYCR+QKCL+VGMVKE+VR  S  GRRGRLSSKT++
Sbjct:  116 TSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEIVRHGSLSGRRGRLSSKTKL 220

[Close]

Query: 1471 TDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRI 1785
            T +     + +D +++C VC D A C HYG RTCEGCKGFFKRT+QKN++Y C  +K C +DKR R+RCQYCR+QKCL+VGMVKE+VR  S  GRRGRLSSKT++
Sbjct:  116 TSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEIVRHGSLSGRRGRLSSKTKL 220

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Celegans
Match: nhr-6 (Nuclear hormone receptor family member nhr-6 [Source:UniProtKB/Swiss-Prot;Acc:P41829])

HSP 1 Score: 155.606 bits (392), Expect = 2.619e-39
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1

Query: 1471 TDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRI 1785
            T +     + +D +++C VC D A C HYG RTCEGCKGFFKRT+QKN++Y C  +K C +DKR R+RCQYCR+QKCL+VGMVKE+VR  S  GRRGRLSSKT++
Sbjct:  252 TSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEIVRHGSLSGRRGRLSSKTKL 356

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Celegans
Match: nhr-25 (Nuclear hormone receptor family member nhr-25 [Source:UniProtKB/Swiss-Prot;Acc:Q19345])

HSP 1 Score: 108.227 bits (269), Expect = 4.019e-24
Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 1

Query: 1513 QLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSS 1773
            ++C VCGD  +  HYG+ TCE CKGFFKRT+Q   QY C    NC VD+  R RC  CRFQKCL +GM  E VR+D  +G R +  S
Sbjct:   16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRFQKCLTMGMKMEAVRADRMRGGRNKFGS 102

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Match: Hr38 (gene:FBgn0014859 transcript:FBtr0301347)

HSP 1 Score: 185.267 bits (469), Expect = 5.236e-48
Identity = 119/299 (39.80%), Postives = 170/299 (56.86%), Query Frame = 1

Query: 1510 NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            +QLC VCGDTAACQHYGVRTCEGCKGFFKRT+QK ++Y+CL  KNC VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S                  S     + +++  H +   +        YE+    S    +++F   L SSV  ++Q+ + IPG+ DL   DQ+L+ +  +L++ +L+LA R       ++  + T +      LR  G  +W+++I + S SL   +  D++  A L A+ +     I ++   + P  +  LQ + I  L+ H
Sbjct:  504 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPP----------------SPPISLITALVRSHVDTTPDPSCLDYSHYEEQ-SMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRT-QCLRSFG--EWLNDIMEFSRSLHN-LEIDISAFACLCALTL-----ITERHGLREPKKVEQLQMKIIGSLRDH 776

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Match: Hr38 (gene:FBgn0014859 transcript:FBtr0081397)

HSP 1 Score: 185.652 bits (470), Expect = 1.108e-47
Identity = 119/299 (39.80%), Postives = 170/299 (56.86%), Query Frame = 1

Query: 1510 NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            +QLC VCGDTAACQHYGVRTCEGCKGFFKRT+QK ++Y+CL  KNC VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S                  S     + +++  H +   +        YE+    S    +++F   L SSV  ++Q+ + IPG+ DL   DQ+L+ +  +L++ +L+LA R       ++  + T +      LR  G  +W+++I + S SL   +  D++  A L A+ +     I ++   + P  +  LQ + I  L+ H
Sbjct:  746 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPP----------------SPPISLITALVRSHVDTTPDPSCLDYSHYEEQ-SMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRT-QCLRSFG--EWLNDIMEFSRSLHN-LEIDISAFACLCALTL-----ITERHGLREPKKVEQLQMKIIGSLRDH 1018

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Match: usp (gene:FBgn0003964 transcript:FBtr0333803)

HSP 1 Score: 119.398 bits (298), Expect = 8.544e-28
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRR---GRL 1767
            LC +CGD A+ +HYGV +CEGCKGFFKRT++K+  Y C +++NCI+DKR+RNRCQYCR+QKCL  GM +E V+ +  +G R   GRL
Sbjct:  103 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQRGARNAAGRL 189

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Match: usp (gene:FBgn0003964 transcript:FBtr0070346)

HSP 1 Score: 119.398 bits (298), Expect = 8.544e-28
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRR---GRL 1767
            LC +CGD A+ +HYGV +CEGCKGFFKRT++K+  Y C +++NCI+DKR+RNRCQYCR+QKCL  GM +E V+ +  +G R   GRL
Sbjct:  103 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQRGARNAAGRL 189

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0082563)

HSP 1 Score: 116.316 bits (290), Expect = 3.500e-26
Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            C+VCGD ++ +HYG  TCEGCK FFKR++++N  Y C  S+NC +D+  RN+CQYCR +KCLK+GM +E V       +RGR+       AG     +G    +   P G +G      S L+ +  +      +   +Y   ++ + I+ +          +    ++ KNIP F +LQ+TDQ
Sbjct:  200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAV-------QRGRVPPTQPGLAGM----HGQYQIANGDPMGIAG--FNGHSYLSSYISLLLRAEPYPTSRYGQCMQPNNIMGIDNICELAARLLFSAVEWAKNIPFFPELQVTDQ 370

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
Match: nr4a2b (nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103])

HSP 1 Score: 187.578 bits (475), Expect = 5.666e-50
Identity = 122/301 (40.53%), Postives = 169/301 (56.15%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLE----GSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLK 2400
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+ S KGRRGRL SK +                +D+P   S + V LL+ L + H +   +       K++ S E    G   L +++F   L +S+  +R + + IPGF +L   DQ  ++   A   + +       N P    D        +L  L+ V G  +W+D+I + S +L + +  D++  + +AA+ +V      ++   K P     LQ++ I  LK
Sbjct:  257 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTASLKGRRGRLPSKPK--------------SPQDIP--VSFTPVNLLNALVRAHIDSNPSMARLDYSKFQTSPEYHSGGDESLHIQQFYDLLTASMSIIRGWAEKIPGFTELPKCDQ-ELLFESAFLELFVLRLAYRSNLP---EDKLIFCNGMVLHKLQCVRGFGEWIDSIVEFSSNL-QSMSLDVSAFSCIAALTIV-----TERHGLKEPKKAEELQNKLINCLK 531

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
Match: nr4a1 (nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11])

HSP 1 Score: 186.037 bits (471), Expect = 1.934e-49
Identity = 119/303 (39.27%), Postives = 172/303 (56.77%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S +V               S     + S++T H +   + P    + Y    E ++ L  KE       F   L  S+  +R++  +IPGF      DQ+L+++   +++ +L+LA R   +   ++  +   +      +R  G  DW+D+I + S+SL   ++ D++  + LA +++     I  +   K P  I   Q+R I  L+ H
Sbjct:  239 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDSVSV---------------SSPVNIIASLVTAHID---SNPASANLDYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELLLESAFVELFILRLAYRSNPETDKLIFCNGVVLHRT-QCVRSFG--DWIDSIMEFSQSLHR-LNLDISAFSCLATLVI-----ITDRHGLKEPKRIEDFQNRLITCLRDH 514

[Close]

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S +V               S     + S++T H +   + P    + Y    E ++ L  KE       F   L  S+  +R++  +IPGF      DQ+L+++   +++ +L+LA R   +   ++  +   +      +R  G  DW+D+I + S+SL   ++ D++  + LA +++     I  +   K P  I   Q+R I  L+ H
Sbjct:  239 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDSVSV---------------SSPVNIIASLVTAHID---SNPASANLDYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELLLESAFVELFILRLAYRSNPETDKLIFCNGVVLHRT-QCVRSFG--DWIDSIMEFSQSLHR-LNLDISAFSCLATLVI-----ITDRHGLKEPKRIEDFQNRLITCLRDH 514

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
Match: nr4a1 (nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11])

HSP 1 Score: 184.882 bits (468), Expect = 6.216e-49
Identity = 119/303 (39.27%), Postives = 172/303 (56.77%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S +V               S     + S++T H +   + P    + Y    E ++ L  KE       F   L  S+  +R++  +IPGF      DQ+L+++   +++ +L+LA R   +   ++  +   +      +R  G  DW+D+I + S+SL   ++ D++  + LA +++     I  +   K P  I   Q+R I  L+ H
Sbjct:  270 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDSVSV---------------SSPVNIIASLVTAHID---SNPASANLDYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELLLESAFVELFILRLAYRSNPETDKLIFCNGVVLHRT-QCVRSFG--DWIDSIMEFSQSLHR-LNLDISAFSCLATLVI-----ITDRHGLKEPKRIEDFQNRLITCLRDH 545

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
Match: nr4a1 (nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11])

HSP 1 Score: 184.882 bits (468), Expect = 6.216e-49
Identity = 119/303 (39.27%), Postives = 172/303 (56.77%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    S +V               S     + S++T H +   + P    + Y    E ++ L  KE       F   L  S+  +R++  +IPGF      DQ+L+++   +++ +L+LA R   +   ++  +   +      +R  G  DW+D+I + S+SL   ++ D++  + LA +++     I  +   K P  I   Q+R I  L+ H
Sbjct:  270 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDSVSV---------------SSPVNIIASLVTAHID---SNPASANLDYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELLLESAFVELFILRLAYRSNPETDKLIFCNGVVLHRT-QCVRSFG--DWIDSIMEFSQSLHR-LNLDISAFSCLATLVI-----ITDRHGLKEPKRIEDFQNRLITCLRDH 545

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Match: bmp7.2 (bone morphogenetic protein 7, gene 2 [Source:Xenbase;Acc:XB-GENE-855954])

HSP 1 Score: 184.111 bits (466), Expect = 9.983e-49
Identity = 122/323 (37.77%), Postives = 182/323 (56.35%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDS----LEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGPTQNQQIFSTVTEYNEDQC 2472
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +  A S+ V                     + S++  H +   +       K++++    LE  +   +++F   L  S++ +R++ + I GFV+L   DQDL+++   L++ +L+LA R   +   ++  +      +L   + V G  +W+D+I + S +L    + D+   + L+A+++     I  +   K P  +  LQ R I  LK H         + S++ E N   C
Sbjct:  246 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQIAESSPVS-------------------LINSLVRAHIDSIPSSSKLDYSKFQENVPVQLEKESSADVQQFYDLLSGSLEVIRKWAEKIQGFVELPKEDQDLLLESAFLELFILRLAYRSRPEEGKLIFCNGV----VLHRTQCVRGFGEWIDSIIEFSHNLQR-TNIDVPSFSCLSALVI-----ITDRHGLKEPKKVEELQSRIINCLKEH---------VPSSMNEQNRPNC 530

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Match: nr4a2 (nuclear receptor subfamily 4 group A member 2 [Source:NCBI gene;Acc:100101682])

HSP 1 Score: 184.111 bits (466), Expect = 1.312e-48
Identity = 119/305 (39.02%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       E  + G     +++F   L  S++ +R + + IPGF +L   DQDL+ +   L++ +L+LA R       ++  +      +L+ L+ V G  +W+D+I   S +L   ++ D++  + +AA+ +     I ++   K P  +  LQ++ +  LK H
Sbjct:  255 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPP---------------SPPVSLISALVRAHVD---SNPAVSSLDYSRFQANPEYQMNGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFSELHKQDQDLLFESAFLELFVLRLAYRSNPAEGKLIFCNGV----VLNRLQCVRGFGEWIDSIVDFSSNLHS-MNIDISAFSCIAALAV-----ITERHGLKEPKRVEELQNKIVNCLKDH 531

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Match: nr4a2 (nuclear receptor subfamily 4 group A member 2 [Source:NCBI gene;Acc:100101682])

HSP 1 Score: 184.111 bits (466), Expect = 1.973e-48
Identity = 119/305 (39.02%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       E  + G     +++F   L  S++ +R + + IPGF +L   DQDL+ +   L++ +L+LA R       ++  +      +L+ L+ V G  +W+D+I   S +L   ++ D++  + +AA+ +     I ++   K P  +  LQ++ +  LK H
Sbjct:  276 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPP---------------SPPVSLISALVRAHVD---SNPAVSSLDYSRFQANPEYQMNGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFSELHKQDQDLLFESAFLELFVLRLAYRSNPAEGKLIFCNGV----VLNRLQCVRGFGEWIDSIVDFSSNLHS-MNIDISAFSCIAALAV-----ITERHGLKEPKRVEELQNKIVNCLKDH 552

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Match: abi2 (abl-interactor 2 [Source:Xenbase;Acc:XB-GENE-944589])

HSP 1 Score: 176.407 bits (446), Expect = 5.720e-46
Identity = 121/316 (38.29%), Postives = 176/316 (55.70%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK---HFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGPTQNQ--QIFSTVT 2451
            C VCGD AACQHYGVRTCEGCKGFFKRT+QK A+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+D+ KGRRGRL SK +    S N+           P G   + V  L+  T     +  +       +   + + EG+    + +F   L  S +  +++ + +PGF +L   DQ L+I+   L++ +L+L++R        V  +   +  I   LR  G  +W+D +   S +L + ++ D++ +A L+A  +        +   K+P  +  L ++ +  LK H     QN+  Q+ STV 
Sbjct:  257 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKKAKYVCLANKNCPVDKRRRNRCQYCRFQKCLNVGMVKEVVRTDNLKGRRGRLPSKPK----SPNLHETSLQVPSTTPAGILNALVHALADSTSTDLDYSTY-------STTTDQAAEGNDTESVHQFYNLLTISFEVTKKWAEKLPGFKELSKDDQTLLIESTFLELFILRLSVRSNMAEDEFVFCNGCVLHRI-QCLR--GFGEWLDAVQHFSLNL-QSLNLDVSTVACLSAACL-----FTGRQGLKDPKKVEELHNKIVGCLKEHLAVRGQNRPNQLDSTVV 552

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Match: grip2 (glutamate receptor interacting protein 2 [Source:Xenbase;Acc:XB-GENE-854056])

HSP 1 Score: 125.946 bits (315), Expect = 7.332e-30
Identity = 84/249 (33.73%), Postives = 121/249 (48.59%), Query Frame = 1

Query: 1354 SELGPTSIPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRID----------VNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            S +GP S+PS  +L  P   S   + M N S SE        S   +  ++             +C +CGD ++ +HYGV +CEGCKGFFKRTI+K+  Y C  +K+C++DKR+RNRCQYCR+QKCL +GM +E V+ +    +R R  S T   + S        S S ++P         +  IL     V    P   A   +  L  ST   +       +  +  + ++ K IP F DL L DQ
Sbjct:   79 SSMGPHSLPSPTILNFPGHESPPFNLMNNISCSEDIKPPPGLSNLGSPCMNNYSCNSPGALTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDTKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER---QRSREKSDTEAESTS--------STSEEMP---------VERILEAELAV---EPKIEAFG-DAGLPNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLEDQ 303

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
Match: Nr4a2 (nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456])

HSP 1 Score: 187.578 bits (475), Expect = 6.956e-50
Identity = 120/305 (39.34%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 538

[Close]

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 538

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
Match: Nr4a2 (nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456])

HSP 1 Score: 186.037 bits (471), Expect = 9.205e-50
Identity = 120/305 (39.34%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  199 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 475

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
Match: Nr4a2 (nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456])

HSP 1 Score: 178.333 bits (451), Expect = 1.915e-48
Identity = 92/192 (47.92%), Postives = 117/192 (60.94%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQ
Sbjct:  199 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQ 372

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
Match: Nr4a1 (nuclear receptor subfamily 4, group A, member 1 [Source:MGI Symbol;Acc:MGI:1352454])

HSP 1 Score: 180.644 bits (457), Expect = 2.068e-47
Identity = 131/358 (36.59%), Postives = 186/358 (51.96%), Query Frame = 1

Query: 1330 SFSLPASISELGPTSI--PSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHR 2382
            S+S+PA+   L PTS    ++G+L  P +S+ S  G +  S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QK+A+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++   F              ED+ +      +++F   L  S+  +R++ + IPGF++L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+DNI   S SL   +  D+   A L+A+++     I  +   ++P  +  LQ+R
Sbjct:  226 SYSMPAAFPGLAPTSPNRDTSGILDAPVTSTKSRSGASGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPTNLLTSLIRAHLDSGPSTAKLDYSKFQELVLPRF------------GKEDAGD------VQQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHQLQCARGFGDWIDNILAFSRSLHS-LGVDVPAFACLSALVL-----ITDRHGLQDPRRVEELQNR 533

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BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Match: sp|P22736|NR4A1_HUMAN (Nuclear receptor subfamily 4 group A member 1 OS=Homo sapiens OX=9606 GN=NR4A1 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.800e-50
Identity = 133/366 (36.34%), Postives = 187/366 (51.09%), Query Frame = 1

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+P +   L PTS  +  +G+L  P +S+ +  G    S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   +  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  223 SYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQ--DLLLESAFLELFILRLAYRSKPGEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLLV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 538

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BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Match: sp|P51666|NR4A1_CANLF (Nuclear receptor subfamily 4 group A member 1 OS=Canis lupus familiaris OX=9615 GN=NR4A1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.642e-50
Identity = 121/301 (40.20%), Postives = 165/301 (54.82%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSR----DVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK + +   A+  N   S  R      P      Y     ++  HF              ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   V  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK-QPPDASPANLLTSLVRAHLDSGPSTAKLDYSKFQELVLPHF------------GKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFAELSPGDQ--DLLLESAFLELFILRLAYRSKPAEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHGLVV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 538

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Match: sp|P43354|NR4A2_HUMAN (Nuclear receptor subfamily 4 group A member 2 OS=Homo sapiens OX=9606 GN=NR4A2 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.730e-49
Identity = 120/305 (39.34%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 538

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Match: sp|Q06219|NR4A2_MOUSE (Nuclear receptor subfamily 4 group A member 2 OS=Mus musculus OX=10090 GN=Nr4a2 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.866e-49
Identity = 120/305 (39.34%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 538

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Match: sp|Q07917|NR4A2_RAT (Nuclear receptor subfamily 4 group A member 2 OS=Rattus norvegicus OX=10116 GN=Nr4a2 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 5.297e-49
Identity = 120/305 (39.34%), Postives = 174/305 (57.05%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +     +                 S     + +++  H +   + P   ++ Y       +  + G     +++F   L  S++ +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D+I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ++ +  LK H
Sbjct:  262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPP---------------SPPVSLISALVRAHVD---SNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGV----VLHRLQCVRGFGEWIDSIVEFSSNLQN-MNIDISAFSCIAALAMV-----TERHGLKEPKRVEELQNKIVNCLKDH 538

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Match: A0A4Z2DQC9 (Nuclear receptor subfamily 4 group A member 3 OS=Schistosoma japonicum OX=6182 GN=EWB00_009911 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.786e-54
Identity = 118/268 (44.03%), Postives = 155/268 (57.84%), Query Frame = 1

Query: 1471 TDYSQYDTSRI-----DVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGS------------------------------------ANVGNGWDSCSRDVPGGGS------GSYVTLLSILTKHFEV-------FCNRPVWRAIKYE-------DSLEGSTILILK-------EFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            T+Y+  D + I     D +QLCLVCGD AACQHYGVRTCEGCKGFFKRTIQKNAQY+CLQ+KNC+VDKRRRNRCQYCRFQKCLKVGMVKEVVR DS KGRRGRLSSK R +                                        N G  + +C+  +            S VTLLS+L++ +E+         N     +++++       DSL+ +T+  +K       +F L LE S+Q++R+Y + +PGF++L + D+
Sbjct:  282 TNYNLNDINSITMTETDCHQLCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQAKNCVVDKRRRNRCQYCRFQKCLKVGMVKEVVRRDSLKGRRGRLSSKARCQLNEHGGLTNFYNDTNLKQNLLPLHNFLHKRNSLCNNLSLINNGKRYTNCNLQLNTMNRTNSCHVNSTVTLLSMLSRAYEIVGPRNHSIINNNEIDSMEHDELNVDVNDSLQVTTLNDMKIDEQYTMKFCLLLEESMQELRRYAEYVPGFMNLSVNDR 549

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BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Match: A0A094ZSH8 (Nuclear receptor subfamily 4 group A member 3 (Fragment) OS=Schistosoma haematobium OX=6185 GN=MS3_04330 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 7.386e-51
Identity = 115/269 (42.75%), Postives = 145/269 (53.90%), Query Frame = 1

Query: 1474 DYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIR----AGSANVGNGWDSCSRDVP-------------------------------------GGGSGSYVTLLSILTKHFEVFCNRPVWRAI-----------------------KYEDSLEGST------ILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            D +    +  D +QLCLVCGD AACQHYGVRTCEGCKGFFKRTIQKNAQY+CLQ+KNC+VDKRRRNRCQYCRFQKCLKVGMVKEVVR DS KGRRGRLSSK R +     G AN  N  +     +P                                          S VTLLS+L++ +E+    P   ++                       + EDSL+ S+           +F   LE S+Q+++ Y + +PGF++L + D+
Sbjct:  115 DINSISMNETDCHQLCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQAKNCVVDKRRRNRCQYCRFQKCLKVGMVKEVVRRDSLKGRRGRLSSKARCQLNEHGGLANCYNDGNINKNLLPLHSFLHKRNSISPNFSSIHGKRYSGSNIQLNHTNRTNSNTVNSTVTLLSMLSRAYEMV--GPRSHSVMNNNENNLIQSNECSKKHDVLNGEVEDSLQASSDDTEIDEHYTNKFCSILEESMQELKHYAELVPGFMNLSINDR 381

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Match: H2KRL0 (Nuclear receptor subfamily 4 group A member 3 (Fragment) OS=Clonorchis sinensis OX=79923 GN=CLF_106587 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.202e-49
Identity = 98/153 (64.05%), Postives = 111/153 (72.55%), Query Frame = 1

Query: 1501 IDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGS 1959
            +D NQ CLVCGD+AACQHYGVRTCEGCKGFFKRTIQKNAQY+CLQSKNC+VDKRRRNRCQYCRFQKCLKVGMVKEVVR DS KGRRGRLSSK R +      GN +     D+    SG++ +L   +        N     A ++ DSL GS
Sbjct:  856 VDFNQQCLVCGDSAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQSKNCVVDKRRRNRCQYCRFQKCLKVGMVKEVVRRDSLKGRRGRLSSKARCQLNEHTYGNNYPGHLSDL-YLSSGNHNSLRKTMAP-----VNHTSSVARRFGDSLSGS 1002

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Match: A0A0R3S8B8 (Nuclear receptor domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS378 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.352e-49
Identity = 111/234 (47.44%), Postives = 131/234 (55.98%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIR------AGSANVGNGWDSCSRDVPGGG------------------------------SGSYVTLLSILTKHFE-VFCNRPVWRAIKY------------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
             CLVCGD AACQHYGVRTCEGCKGFFKRTIQKNA Y+CLQ+KNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVR DS KGRRGRLS+K R         G+ N   G+   +   PG G                              S + +TLLS+LTK +E V C        K+            +   E     +++  +  L  SV+ +RQY + +PGF  L   DQ
Sbjct:  501 FCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAHYVCLQTKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRRDSLKGRRGRLSAKARCPIDGEGGGGADNAHKGFSLNAGGGPGAGFMLSGDKGTHHGVLSAGYGNGSGPAGTTSSSANSMTLLSMLTKAYETVDCTLEAAHLFKHPPGSNYLVKDRDQQGFEKDEDALIQMAIKNLGESVEIIRQYAELVPGFSSLTEADQ 734

HSP 2 Score: 78.5666 bits (192), Expect = 6.426e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 1

Query: 2188 DDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGPTQNQQIFSTVTE-YNEDQCKNQQIDCNKSNTSSNDTLSLAANDSTFFSRALNHKDTI 2586
            ++L   GL  W+  +      L E    D + +AGL+A++++N++++  +  F+N S+IY + HRF+EMLK+HCC P     I +  +  Y  D+          + TS+ + +     DST+FS+    KDT+
Sbjct:  891 EELGRAGLGPWIRALTWFGWQLLELAMGDHSTVAGLSALVLINYQALCGRSDFENSSEIYTVHHRFVEMLKSHCCSPANAVTIPTGYSGCYGPDR---DPTAAVAAATSAANMVPPTRADSTYFSQVFKKKDTV 1021

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Match: G3UM99 (Nuclear receptor subfamily 4 group A member 1 OS=Loxodonta africana OX=9785 GN=NR4A1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.459e-49
Identity = 139/364 (38.19%), Postives = 192/364 (52.75%), Query Frame = 1

Query: 1330 SFSLPASISELGPTS--IPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR--IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            S+S+PA+   L PTS  +  +G+L VP +S+ +  G  + S                        C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    A  AN+         D     SG   T L   +K  E+   R        ED+ +      +++F   L  S++ +R++ + IPGF +L   DQ   + L +  + L  L L   +KP        + +  +L  L+   G  DW+D+I   S SL   V  D+   A L+A+++     I  +   + P  +  LQ+R    LK H
Sbjct:  209 SYSMPAAFPGLAPTSPHLDGSGILDVPVTSAKARSGAPSGSEGR---------------------CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD-----SGPSTTKLDY-SKFQELMLPR-----FGKEDAGD------VQQFYDLLSGSLEVIRKWAEKIPGFTELSPGDQ--DLLLESAFLELFILRLAYRSKPAEGKLIFCSGL--VLHRLQCARGFGDWIDSILAFSRSLHSLVV-DVPAFACLSALVL-----ITDRHGLQEPRRVEELQNRIASCLKEH 524

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Match: nr4a2a (nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184])

HSP 1 Score: 186.422 bits (472), Expect = 2.094e-49
Identity = 123/310 (39.68%), Postives = 172/310 (55.48%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGP 2418
            +C VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+ S KGRRGRL SK +                       +   V+LLS L + H +   + P   ++ Y       +  L G     +++F   L  S+  +R + + IPGF DL   DQDL+ +   L++ +L+LA R       ++  +      +L  L+ V G  +W+D I + S +L   ++ D++  + +AA+ MV      ++   K P  +  LQ + +  LK     P
Sbjct:  278 MCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTASLKGRRGRLPSKPKSPQEPTP----------------APPPVSLLSALVRAHVD---SNPTMSSLDYSRFHASPDYQLSGDDTQHIQQFYDLLTGSMDIIRAWAQKIPGFTDLPKQDQDLLFESAFLELFVLRLAYRSNPMEGKLIFCNSV----VLHRLQCVRGFGEWIDAIVEFSSNLQS-MNIDISAFSCIAALAMV-----TERHGLKEPKKVEELQTKIVNCLKDQLAFP 558

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Match: nr4a1 (nuclear receptor subfamily 4 group A member 1-like [Source:NCBI gene;Acc:103033875])

HSP 1 Score: 182.956 bits (463), Expect = 1.687e-48
Identity = 121/304 (39.80%), Postives = 172/304 (56.58%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    SA             P     + VT  S++T H +   + P    + Y    E    L  KE       F   L  S+  +R++ ++IPGF      DQDL+++   +++ +L+LA R   +   ++  +      +L  ++ V G  DW+D+I + S++L   ++ D+   + LA +++     I  +   K P  +   Q+  I  LK H
Sbjct:  235 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKPLQESA-------------PAAAPVNIVT--SLVTAHMD---SDPALDKLDYSKYQETVASLSEKENANDIQQFYDLLTGSMTVIRKWAESIPGFNAFCKEDQDLLLESAFVELFILRLAYRSNPETDELIFCNGV----VLHRMQCVRGFGDWIDSIMEFSQNLHR-MNLDVASFSCLATLVI-----ITDRHGLKEPKRVEDFQNSLIPCLKDH 510

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Match: nr4a2a (nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184])

HSP 1 Score: 181.03 bits (458), Expect = 2.697e-48
Identity = 95/193 (49.22%), Postives = 117/193 (60.62%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            +C VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+ S KGRRGRL SK +                       +   V+LLS L + H +   + P   ++ Y       +  L G     +++F   L  S+  +R + + IPGF DL   DQ
Sbjct:  207 MCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTASLKGRRGRLPSKPKSPQEPTP----------------APPPVSLLSALVRAHVD---SNPTMSSLDYSRFHASPDYQLSGDDTQHIQQFYDLLTGSMDIIRAWAQKIPGFTDLPKQDQ 380

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Match: nr4a2b (nuclear receptor subfamily 4 group A member 2-like [Source:NCBI gene;Acc:103029080])

HSP 1 Score: 179.104 bits (453), Expect = 6.101e-47
Identity = 121/304 (39.80%), Postives = 174/304 (57.24%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKY-------EDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            LC VCGD AACQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +KNC VDKRRRNRCQYCRFQKCL VGMVKEVVR+DS KGRRGRL SK +                +DVP   S + +    +   H +   + P+   + Y       E    G   L +++F   L  S+  +R + + +PGF DL   DQ+L+ +   L++ +L+LA R       ++  + T +   L  +R  G  +W+D+I + S +L + ++ D++  + +AA+ M     + ++   K    +  LQ + +  LK H
Sbjct:  273 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPK--------------SPQDVPSSLSPASLLSALV-RAHID---SNPLIGRLDYSKFQVNPEYHGAGDESLHVQQFYDLLTGSMSIIRGWAEKMPGFTDLPKCDQELLFESAFLELFVLRLAYRSNLAEDKLIFCNGTVLHK-LQCVRAFG--EWIDSIVEFSVNL-QSMNIDISAFSCMAALTM-----LTERHGLKESKKMEELQSKILNCLKEH 549

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Match: NR4A1 (probable nuclear hormone receptor HR38 [Source:NCBI gene;Acc:103040841])

HSP 1 Score: 178.333 bits (451), Expect = 8.706e-47
Identity = 118/304 (38.82%), Postives = 168/304 (55.26%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD+A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+DS KGRRGRL SK +    SA   N                     +++  H +   + P    + Y    E  + L  KE       F   L  +++ ++++ + IPGF      DQ+L+++   +++ +L+LA R       ++  +      +L  L+ V G  DW+D+I   S SL   +  D+     LAA+++     I  +   K P  +  LQ+R I  L+ H
Sbjct:  261 CAVCGDSASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCHVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSVPDSAQPVN------------------ITAALVRAHID---SSPALGKLDYSKYQEDVSGLSEKEDANDIKLFYELLTGTMEVLQKWAEAIPGFSFFCREDQELLLESAFVELFILRLAYRSHPDEQKLIFCNGL----VLHRLQCVRGFGDWIDSIMDFSNSLHR-MSLDVTSFCCLAALVI-----ITDRHGLKEPKRVEELQNRLISCLRDH 533

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Match: thrb (thyroid hormone receptor beta [Source:NCBI gene;Acc:30607])

HSP 1 Score: 112.079 bits (279), Expect = 1.264e-26
Identity = 89/295 (30.17%), Postives = 142/295 (48.14%), Query Frame = 1

Query: 1486 YDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKN--AQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDV---PGGGSGSYVTLLSILTKHFEVFCNRPVWRAIK------------YEDSLEGSTILILK---EFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMM 2310
            Y  S +D N+ C+VCGD A   HY   TCEGCKGFF+RTIQKN    Y C    +CI+D+  RN+CQ CR+QKC+ VGM  ++V  DS +  + RL  + R R          D   R+V   PG     +  +  +   H         W+  +               SL+G   + L+    F   +  S+  V  + K +P F +L   DQ +++K   ++I+ L+ A+R   +  ++  + + +++   + L++ GL    D I+ L  SL+ F  DD  +    A ++M
Sbjct:   29 YMPSYLDKNEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYACKYEGSCIIDRITRNQCQECRYQKCIAVGMASDLVLDDSKRLAKRRLIEENRQRRKQ-------DEKRRNVIERPGPSDKEWELIQLVTAAHCTTNAQGSQWKEHRRFLVSNCLGPESVLSSLDGDDKVDLQAFTHFTAIITPSITRVVDFAKKLPMFTELPCEDQIVLLKGCCMEIMSLRAAVRYDPESDTLTLNGEVAVKK--EQLKNGGLGLVSDAIFDLGRSLAAFSLDDTEVALLQAVLLM 314

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006803.1 (pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-1 gene:ENSPMAG00000006138.1 transcript:ENSPMAT00000006803.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 102.834 bits (255), Expect = 3.298e-25
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 1513 QLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKE 1725
            + C+VCGD A+ +HYG  +CEGCKGFFKR+++KN +Y C  S++C+++K  RNRCQYCR QKC  VGM  E
Sbjct:  125 EFCVVCGDRASGRHYGAVSCEGCKGFFKRSVRKNLKYTCRGSQDCVINKHHRNRCQYCRLQKCFNVGMKTE 195

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Match: ESR2 (estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3468])

HSP 1 Score: 102.449 bits (254), Expect = 1.509e-24
Identity = 59/190 (31.05%), Postives = 99/190 (52.11%), Query Frame = 1

Query: 1510 NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEV-VRSDSFKGRRGRLSSK-----TRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQL 2061
             QLC VCGD ++  HYGV TCEGCK FFKR++Q    ++C  + +C +DK RR RCQ CR +KC + GM+++V + + +   R  RL+ +       ++    N  +G ++ S+ + GG +   +  + +  +  ++ C R     +     +   T L  KE +         +  + K IPGF++L L
Sbjct:   29 TQLCSVCGDFSSGYHYGVWTCEGCKAFFKRSVQGKNNFVCPATNHCTIDKTRRRRCQACRLRKCYEAGMIRDVPLLATACSSRLTRLARRHCMVIKSLKQLEKNASHGTEA-SKVMLGGVASVGIIHILLEAEPPKLLCMRSPGEPLTEASMMTLFTDLATKEMV--------HIVSWAKKIPGFMELDL 209

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Match: rorb (RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2])

HSP 1 Score: 102.064 bits (253), Expect = 5.831e-23
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR 1782
            C +CGD ++  HYGV TCEGCKGFF+R+ Q NA Y C + +NC++D+  RNRCQ+CR QKCL +GM ++ V+        GR+S K R
Sbjct:   21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKF-------GRMSKKQR 101

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Match: nr1d2a (nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1])

HSP 1 Score: 102.834 bits (255), Expect = 7.942e-23
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYM-CLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIR 1788
            LC VCGD A+  HYGV  CEGCKGFF+R+IQ+N +Y  CL+++ C + +  RNRCQ+CRF+KCL VGM K+ VR        GR+  + ++R
Sbjct:  121 LCKVCGDAASGFHYGVHACEGCKGFFRRSIQQNIKYKPCLKNETCPIVRANRNRCQHCRFKKCLSVGMSKDAVRF-------GRIPKREKLR 205

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Match: EDO42195 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S286])

HSP 1 Score: 124.79 bits (312), Expect = 4.344e-31
Identity = 69/187 (36.90%), Postives = 101/187 (54.01%), Query Frame = 1

Query: 1510 NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
             ++C +CGD ++  HYGV++CEGCK FFKRT+QK  QY C++SK+C +DK  R RCQYCRFQKCL +GM+KE VR D   G R R+ S   ++  +                    S + +  I  +   +   RP +  +   D    + +  + E  LTL+  V+ V  + K +PGF D+   DQ
Sbjct:   11 QRVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAETF---------------VSSELIIQLIQARPDAIPKRRPDYLELGLNDMCPLNPVEAIME--LTLQ-EVEHVINWAKRVPGFCDVDKEDQ 179

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Match: EDO27017 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAF5])

HSP 1 Score: 120.168 bits (300), Expect = 2.944e-30
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 1

Query: 1510 NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSS 1773
             ++C +CGD ++  HYGV++CEGCK FFKRT+QK  QY C++SK+C +DK  R RCQYCRFQKCL +GM+KE VR D   G R R+ S
Sbjct:   11 QRVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKS 98

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BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Match: EDO39982 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8G8])

HSP 1 Score: 121.324 bits (303), Expect = 1.024e-29
Identity = 75/202 (37.13%), Postives = 104/202 (51.49%), Query Frame = 1

Query: 1516 LCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSS---------KTRIRAGSANVGNGWDSCS-RDVPGG-----GSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTI--LILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            LC+VC D A   HYGV TCEGCKGFFKRT+QK  +Y C  +++C +++  RNRCQYCRF+KC+K GM+K+ VR D   G R R +S         K + +A      NG  S    D P G         ++  +  L    +V  + PV          EGS      + + +      +  V Q+ KN+PGF +L+L DQ
Sbjct:    3 LCVVCNDKATGYHYGVFTCEGCKGFFKRTVQKQLEYTCRGNQDCDINQHTRNRCQYCRFEKCVKSGMLKQAVRDDRTPGGRHRHASLQDHRQKKQKLQGKAPKELPQNGLSSPEGPDTPEGVVSKEDENEFLIYIQQLRHDVDVIPDSPV-------KPPEGSPAAGFSVDKLMQYGYQELYQVIQWGKNVPGFRELKLEDQ 197

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Match: EDO37645 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF49])

HSP 1 Score: 112.079 bits (279), Expect = 1.310e-26
Identity = 103/391 (26.34%), Postives = 169/391 (43.22%), Query Frame = 1

Query: 1489 DTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQ-DVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVG-----------LVDWVDNIYKLSESLSEF--VHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGPTQNQQIFSTVTEYNEDQCKNQQIDCNKSNTSSNDTLSLAAN--DSTFFSRALNHKDTIRNVNQNFLI 2613
            + S  +V   C VCGD ++ +HYGV TCEGCK FFKR++++N  Y C  S++C +D+  RN+CQYCR +KCLKVGM +E V       +RGR+ +       +A  G   D       G  +G      S L+    +      +   +++  L     ++  E +  L + +     ++ +NIP F DL +TDQ  +++L   +              L V+++ Q  M   +  L               +V ++DNI    E + +   +H D    A L AI++      +      +P  I +LQ       KT C            + EY  +Q  NQ     K         S++++  +  FF R L  K  I  + ++ L+
Sbjct:   18 EDSEKNVQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAV-------QRGRIPAAQTPTQNAALPGINGD-------GSTNGH-----SYLSGFIALLLRAEPYPTTRFQQGLNMPCGIMGIENICELAARLLFSAVEWARNIPFFPDLAVTDQVALLRLVWSE--------------LFVLNAAQCPMPLQVAPLLATAGIHSNHMSPDRMVSFMDNIRIFQEQVEKLRNLHVDAAEFACLKAIVLFT----SDASGLTDPQYIESLQE------KTQC-----------ALEEYTRNQYPNQPTRFGKLLLRLPSLRSISSSVVEQLFFVR-LVGKTPIETLLRDMLL 353

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Match: EDO32192 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SVT5])

HSP 1 Score: 107.457 bits (267), Expect = 3.545e-25
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 1

Query: 1492 TSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQ-SKNCIVDKRRRNRCQYCRFQKCLKVGMVKE 1725
            + R  VN++C +C D A  QHYGV +CEGCKGFFKR++Q    Y C   +K+C +DKR RNRCQYCRFQKC++ GM+KE
Sbjct:    6 SPRPVVNEICAICLDKATGQHYGVTSCEGCKGFFKRSVQNKKDYTCRNLTKDCPIDKRHRNRCQYCRFQKCIQAGMIKE 84

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
Match: nr4a1 (nuclear receptor subfamily 4 group A member 1 [Source:NCBI gene;Acc:101175402])

HSP 1 Score: 182.57 bits (462), Expect = 2.001e-48
Identity = 116/298 (38.93%), Postives = 179/298 (60.07%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR-IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLEGST-------ILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHR 2382
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKN++Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMV+EVVR+DS KGRRGRL SK + ++  +  V                 S V++++ L + H +   + P    + Y   LE          +  +K+F   L +S++ +R++ K+IPGF D  L DQ+L+++   +++ +L+LA R   K   ++  +     ++L   + V G  +W+D+I + S+SL   +  D++  + LAA+++     I  +   K P  +  LQ++
Sbjct:  236 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVREVVRTDSLKGRRGRLPSKPKGVKDATPIV-----------------SPVSMIASLVRAHID---SNPAVGNLDYSKYLEKEVSANQKEDVSDIKQFYDLLTASLEVIRKWAKDIPGFSDFCLEDQELLVESAFVELFILRLAYRSNPKMEKLIFCNG----AVLHKTQCVRGFGEWIDSILEFSQSLHR-MKLDVSSFSCLAALIL-----ITDRHGLKEPKRVEDLQNQ 503

[Close]

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR-IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLEGST-------ILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHV-GLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHR 2382
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKN++Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMV+EVVR+DS KGRRGRL SK + ++  +  V                 S V++++ L + H +   + P    + Y   LE          +  +K+F   L +S++ +R++ K+IPGF D  L DQ+L+++   +++ +L+LA R   K   ++  +     ++L   + V G  +W+D+I + S+SL   +  D++  + LAA+++     I  +   K P  +  LQ++
Sbjct:  236 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVREVVRTDSLKGRRGRLPSKPKGVKDATPIV-----------------SPVSMIASLVRAHID---SNPAVGNLDYSKYLEKEVSANQKEDVSDIKQFYDLLTASLEVIRKWAKDIPGFSDFCLEDQELLVESAFVELFILRLAYRSNPKMEKLIFCNG----AVLHKTQCVRGFGEWIDSILEFSQSLHR-MKLDVSSFSCLAALIL-----ITDRHGLKEPKRVEDLQNQ 503

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
Match: ENSORLT00000037261.1 (probable nuclear hormone receptor HR38 [Source:NCBI gene;Acc:101165550])

HSP 1 Score: 181.415 bits (459), Expect = 6.367e-48
Identity = 119/305 (39.02%), Postives = 173/305 (56.72%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR-IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+D+ KGRRGRL SK + +   S+ + N                 V +++ L K H +   + P    + Y    E +  L  KE       F   L  ++  +R++++ IPGF D    DQ+L+++   +++ +L+LA R   +   +V  +   +        H    DW+D+I + S+SL   ++ D+++ A LAA+++     I  +   K P  I   Q   I  L+ H
Sbjct:  248 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDNLKGRRGRLPSKPKSMIEASSTIPN-----------------VNIIASLVKAHLD---SNPSAGKLNYSRYQEKTNHLKEKEDAGDIQQFYELLTGALDVIRKWSQAIPGFTDFCEEDQELLLESAFVELFILRLAYRSNPEKDKLVFCNGVVLHR--QQCAH-SFGDWIDSIMEFSQSLHR-MNLDLSLFACLAALVI-----ITDRHGLKEPRRIEDFQSNLISCLREH 523

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
Match: ENSORLT00000019479.2 (probable nuclear hormone receptor HR38 [Source:NCBI gene;Acc:101165550])

HSP 1 Score: 181.415 bits (459), Expect = 6.427e-48
Identity = 119/305 (39.02%), Postives = 173/305 (56.72%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR-IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTH 2406
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+D+ KGRRGRL SK + +   S+ + N                 V +++ L K H +   + P    + Y    E +  L  KE       F   L  ++  +R++++ IPGF D    DQ+L+++   +++ +L+LA R   +   +V  +   +        H    DW+D+I + S+SL   ++ D+++ A LAA+++     I  +   K P  I   Q   I  L+ H
Sbjct:  248 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDNLKGRRGRLPSKPKSMIEASSTIPN-----------------VNIIASLVKAHLD---SNPSAGKLNYSRYQEKTNHLKEKEDAGDIQQFYELLTGALDVIRKWSQAIPGFTDFCEEDQELLLESAFVELFILRLAYRSNPEKDKLVFCNGVVLHR--QQCAH-SFGDWIDSIMEFSQSLHR-MNLDLSLFACLAALVI-----ITDRHGLKEPRRIEDFQSNLISCLREH 523

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
Match: ENSORLT00000030899.1 (probable nuclear hormone receptor HR38 [Source:NCBI gene;Acc:101165550])

HSP 1 Score: 180.259 bits (456), Expect = 9.452e-48
Identity = 125/317 (39.43%), Postives = 181/317 (57.10%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTR-IRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTK-HFEVFCNRPVWRAIKYEDSLEGSTILILKE-------FLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVHDDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGPTQN-QQIF 2439
            C VCGD A+CQHYGVRTCEGCKGFFKRT+QKNA+Y+CL +K+C VDKRRRNRCQ+CRFQKCL VGMVKEVVR+D+ KGRRGRL SK + +   S+ + N                 V +++ L K H +   + P    + Y    E +  L  KE       F   L  ++  +R++++ IPGF D    DQ+L+++   +++ +L+LA R   +   +V  +   +        H    DW+D+I + S+SL   ++ D+++ A LAA+++     I  +   K P  I   Q +  E L+T C   TQ  Q+IF
Sbjct:  248 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDNLKGRRGRLPSKPKSMIEASSTIPN-----------------VNIIASLVKAHLD---SNPSAGKLNYSRYQEKTNHLKEKEDAGDIQQFYELLTGALDVIRKWSQAIPGFTDFCEEDQELLLESAFVELFILRLAYRSNPEKDKLVFCNGVVLHR--QQCAH-SFGDWIDSIMEFSQSLHR-MNLDLSLFACLAALVI-----ITDRHGLKEPRRIEDFQSKLPE-LRTLC---TQGLQRIF 531

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Match: SMESG000063104.1 (SMESG000063104.1)

HSP 1 Score: 1274.23 bits (3296), Expect = 0.000e+0
Identity = 683/684 (99.85%), Postives = 683/684 (99.85%), Query Frame = 1

Query:  169 MESKNMVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHXXXXXXXXXXXXXXXXGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQXXXXXXXXXXXXXXXXXTTQTPSFSLPASISELGPTSIPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDW 2220
            MESKNMVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRID NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGLVDW
Sbjct:    1 MESKNMVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRIDANQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGLVDW 684

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Match: SMESG000063104.1 (SMESG000063104.1)

HSP 1 Score: 1263.06 bits (3267), Expect = 0.000e+0
Identity = 678/679 (99.85%), Postives = 678/679 (99.85%), Query Frame = 1

Query:  184 MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHXXXXXXXXXXXXXXXXGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQXXXXXXXXXXXXXXXXXTTQTPSFSLPASISELGPTSIPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGLVDW 2220
            MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRID NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGLVDW
Sbjct:    1 MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRIDANQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGLVDW 679

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Match: SMESG000063104.1 (SMESG000063104.1)

HSP 1 Score: 1254.97 bits (3246), Expect = 0.000e+0
Identity = 675/676 (99.85%), Postives = 675/676 (99.85%), Query Frame = 1

Query:  184 MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHXXXXXXXXXXXXXXXXGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQXXXXXXXXXXXXXXXXXTTQTPSFSLPASISELGPTSIPSTGMLCVPXXXXXXXHGMANNSVSEHTDSYTDYSQYDTSRIDVNQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQXXXXXXXXXXXXXXXXXXXXXNKPLSVVDSHQTSMRSILDDLRHVGL 2211
            MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRID NQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGL
Sbjct:    1 MVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSDQSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTTDDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTHNNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGPHSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSHPTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRMPLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFGFHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGPTSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRIDANQLCLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKLALRLLNKPLSVVDSHQTSMRSILDDLRHVGL 676

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Match: SMESG000033175.1 (SMESG000033175.1)

HSP 1 Score: 114.775 bits (286), Expect = 8.436e-26
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSS 1773
            C VC D  +  HYGV TCE CKGFFKRTIQ   +Y CL++  C VD   R RC +CRFQKCL VGM  E VR +  +G RGR SS
Sbjct:   29 CPVCNDQVSGFHYGVMTCESCKGFFKRTIQNKKEYQCLENSGCSVDINNRRRCAFCRFQKCLSVGMKSESVRENRMRGGRGRFSS 113

[Close]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Match: SMESG000056421.1 (SMESG000056421.1)

HSP 1 Score: 105.916 bits (263), Expect = 1.673e-23
Identity = 66/185 (35.68%), Postives = 95/185 (51.35%), Query Frame = 1

Query: 1519 CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRRNRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGWDSCSRDVPGGGSGSYVTLLSILTKHFEV-FCNRPVWRAIKYEDSLEGSTILILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQ 2070
            C+VCGD ++ +HYG  TCEGCK FFKR++++N  Y C  + NC +D   RN+CQ CRFQKCLK+GM KE V+    +GR  + SS       S     G    +R +     G  +   S+L+K  ++ F N          D+        +          +  V Q++K+IP F DL +TDQ
Sbjct:  112 CVVCGDKSSGKHYGQYTCEGCKSFFKRSVRRNLTYSCRGNHNCPIDIHHRNQCQNCRFQKCLKMGMRKEAVQ----QGRIPQFSSHYGQYIAST---YGSSYFNRFI-----GMMMQNDSMLSKQEKIGFMNHLFSNHSNICDTTSEEKYFGIDSIYDIASKILHGVIQWSKSIPFFPDLSITDQ 284

The following BLAST results are available for this feature:

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Human
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Celegans
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Yeast
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
NR4A1	5.830e-51	36.34	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
NR4A1	5.830e-51	36.34	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
NR4A1	5.830e-51	36.34	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
NR4A1	7.760e-51	36.34	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
NR4A1	7.760e-51	36.34	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
nhr-6	6.254e-40	60.95	Nuclear hormone receptor family member nhr-6 [Sou...	[more]
nhr-6	6.254e-40	60.95	Nuclear hormone receptor family member nhr-6 [Sou...	[more]
nhr-6	6.254e-40	60.95	Nuclear hormone receptor family member nhr-6 [Sou...	[more]
nhr-6	2.619e-39	60.95	Nuclear hormone receptor family member nhr-6 [Sou...	[more]
nhr-25	4.019e-24	52.87	Nuclear hormone receptor family member nhr-25 [So...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Hr38	5.236e-48	39.80	gene:FBgn0014859 transcript:FBtr0301347	[more]
Hr38	1.108e-47	39.80	gene:FBgn0014859 transcript:FBtr0081397	[more]
usp	8.544e-28	58.62	gene:FBgn0003964 transcript:FBtr0333803	[more]
usp	8.544e-28	58.62	gene:FBgn0003964 transcript:FBtr0070346	[more]
svp	3.500e-26	34.24	gene:FBgn0003651 transcript:FBtr0082563	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
nr4a2b	5.666e-50	40.53	nuclear receptor subfamily 4, group A, member 2b [...	[more]
nr4a1	1.934e-49	39.27	nuclear receptor subfamily 4, group A, member 1 [S...	[more]
nr4a1	1.934e-49	39.27	nuclear receptor subfamily 4, group A, member 1 [S...	[more]
nr4a1	6.216e-49	39.27	nuclear receptor subfamily 4, group A, member 1 [S...	[more]
nr4a1	6.216e-49	39.27	nuclear receptor subfamily 4, group A, member 1 [S...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
bmp7.2	9.983e-49	37.77	bone morphogenetic protein 7, gene 2 [Source:Xenba...	[more]
nr4a2	1.312e-48	39.02	nuclear receptor subfamily 4 group A member 2 [Sou...	[more]
nr4a2	1.973e-48	39.02	nuclear receptor subfamily 4 group A member 2 [Sou...	[more]
abi2	5.720e-46	38.29	abl-interactor 2 [Source:Xenbase;Acc:XB-GENE-94458...	[more]
grip2	7.332e-30	33.73	glutamate receptor interacting protein 2 [Source:X...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Nr4a2	6.956e-50	39.34	nuclear receptor subfamily 4, group A, member 2 [S...	[more]
Nr4a2	6.956e-50	39.34	nuclear receptor subfamily 4, group A, member 2 [S...	[more]
Nr4a2	9.205e-50	39.34	nuclear receptor subfamily 4, group A, member 2 [S...	[more]
Nr4a2	1.915e-48	47.92	nuclear receptor subfamily 4, group A, member 2 [S...	[more]
Nr4a1	2.068e-47	36.59	nuclear receptor subfamily 4, group A, member 1 [S...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P22736\|NR4A1_HUMAN	2.800e-50	36.34	Nuclear receptor subfamily 4 group A member 1 OS=H...	[more]
sp\|P51666\|NR4A1_CANLF	5.642e-50	40.20	Nuclear receptor subfamily 4 group A member 1 OS=C...	[more]
sp\|P43354\|NR4A2_HUMAN	4.730e-49	39.34	Nuclear receptor subfamily 4 group A member 2 OS=H...	[more]
sp\|Q06219\|NR4A2_MOUSE	4.866e-49	39.34	Nuclear receptor subfamily 4 group A member 2 OS=M...	[more]
sp\|Q07917\|NR4A2_RAT	5.297e-49	39.34	Nuclear receptor subfamily 4 group A member 2 OS=R...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4Z2DQC9	6.786e-54	44.03	Nuclear receptor subfamily 4 group A member 3 OS=S...	[more]
A0A094ZSH8	7.386e-51	42.75	Nuclear receptor subfamily 4 group A member 3 (Fra...	[more]
H2KRL0	1.202e-49	64.05	Nuclear receptor subfamily 4 group A member 3 (Fra...	[more]
A0A0R3S8B8	1.352e-49	47.44	Nuclear receptor domain-containing protein OS=Hyme...	[more]
G3UM99	1.459e-49	38.19	Nuclear receptor subfamily 4 group A member 1 OS=L...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
nr4a2a	2.094e-49	39.68	nuclear receptor subfamily 4, group A, member 2a [...	[more]
nr4a1	1.687e-48	39.80	nuclear receptor subfamily 4 group A member 1-like...	[more]
nr4a2a	2.697e-48	49.22	nuclear receptor subfamily 4, group A, member 2a [...	[more]
nr4a2b	6.101e-47	39.80	nuclear receptor subfamily 4 group A member 2-like...	[more]
NR4A1	8.706e-47	38.82	probable nuclear hormone receptor HR38 [Source:NCB...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thrb	1.264e-26	30.17	thyroid hormone receptor beta [Source:NCBI gene;Ac...	[more]
ENSPMAT00000006803.1	3.298e-25	57.75	pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-...	[more]
ESR2	1.509e-24	31.05	estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3...	[more]
rorb	5.831e-23	51.14	RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB...	[more]
nr1d2a	7.942e-23	51.09	nuclear receptor subfamily 1, group D, member 2a [...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO42195	4.344e-31	36.90	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO27017	2.944e-30	57.95	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO39982	1.024e-29	37.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37645	1.310e-26	26.34	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32192	3.545e-25	58.23	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
nr4a1	2.001e-48	38.93	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
nr4a1	2.001e-48	38.93	nuclear receptor subfamily 4 group A member 1 [Sou...	[more]
ENSORLT00000037261.1	6.367e-48	39.02	probable nuclear hormone receptor HR38 [Source:NCB...	[more]
ENSORLT00000019479.2	6.427e-48	39.02	probable nuclear hormone receptor HR38 [Source:NCB...	[more]
ENSORLT00000030899.1	9.452e-48	39.43	probable nuclear hormone receptor HR38 [Source:NCB...	[more]

BLAST of Nuclear receptor subfamily 4 group A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000063104.1	0.000e+0	99.85	SMESG000063104.1	[more]
SMESG000063104.1	0.000e+0	99.85	SMESG000063104.1	[more]
SMESG000063104.1	0.000e+0	99.85	SMESG000063104.1	[more]
SMESG000033175.1	8.436e-26	57.65	SMESG000033175.1	[more]
SMESG000056421.1	1.673e-23	35.68	SMESG000056421.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30004876 ID=SMED30004876|Name=Nuclear receptor subfamily 4 group A|organism=Schmidtea mediterranea sexual|type=transcript|length=2845bp
GCCATTCACTGATTGTGTAGCTTTGTCTGCTCGCTTGGTAAAATAGCGAG
TGTAGAGTGTTATTAGTTATCATTGAACGATAGCATTGTGTTATTAGCAC
TATGTTAATTGCATTTGGACCTCAATATTATTGACAAATCTTAACTTTTA
ACAGATTCGAAGAAAATAATGGAATCTAAGAACATGGTTACAGTAGAATC
TCTGATGCCTGATACAAAACCAGACCATACACAATTGTATTTACTAAGTC
AACATCCGATGTTAACTAGATATGAAAATTATTCAAATATGCTTCCGTAT
TCTAATAATCTTTCTGATCAGTCATTTGCCTTGTCAGATACAAATTCAAA
TTGTGCCCCATTACCATCACTATTTTCATCAACTCATCTTGATTCCAATT
CACTAAACTTTTCACTCAGCCTTCCTCAACTATCAGGGAATGAGTCTCAC
ATAAACTCAATGACAACAGACGATATTTATATGTCTTCCAAATCTTGTTC
TACCTCTCAAAATAACACCATTAACAATCAAGCTTCTGATGTGAATATGT
TTAACAAATCCGAACTCAACTCAAACAATCTTGATTCAGATTTCAACGTC
CAAAATTTCATGACTCACAATAATTTCTCTCGTAATCAAGAGTTCACAAT
TCTTGATACCTCTATTCAAAACTGTTCTTTCAATATTCGACCAAATCAAG
TCGGATCTCCATGCTTTATCCAAAAGCAAAATACAGATTCACATTTTCTT
CCCCAACTTACTGGTCCCCATTCTCGAGATTCAGATTGGTCAAATTCTCA
TCTAATGGTTCCTTCTTTGATGAACAATTTGTCGTTTTTTGAAAACTCTC
CAAGCATGATGATCAATTCCCAAAAAGATGACTACGAAAGAATGTACTCT
GTTGATAATTACTCCCATCCGACAACTTTAAATTTTTTATCGCCCGAATT
AGGATTTACTATTTCTGATAGTCCTTATCAAGAATTCTGTGATTCTCTGT
GGAGACAAAGCAGAGCAAATATAAGATCCCAAAAAGATGGTAGTAAGGAG
CAGTTGGATTCTAGAATGCCGCTAATCAGCGACGACATGTCATATTCAGA
AAAAACAAATAATTTCCTAAATGAGATTGCAAGAGATCAGAAATCATTTG
AAAATCTACCAAATTCTTGCTTGATAAATATAAAAGACAATGATGACAAG
TCTGATCTTGGATTTGGATTTCATCTGAACGATTTCGGAGGCTCTCATAT
TAGTCACCTTCAATCAGGATTGGGAGTTGTAAATTCGAACTCGAATTTCA
ATTTGAATGTGTTTACAACTCAAACGCCATCATTTTCATTGCCAGCAAGC
ATCTCCGAATTGGGTCCAACTTCAATTCCGTCTACTGGAATGTTATGCGT
TCCTTCGTCATCTTCTTCATCCAGCCACGGCATGGCTAATAACTCAGTTT
CTGAGCACACTGATTCATATACAGATTATTCTCAATATGATACTTCTCGA
ATTGATGTCAATCAACTGTGCTTGGTATGTGGTGACACTGCGGCTTGTCA
GCATTACGGTGTTCGTACGTGTGAAGGGTGCAAAGGTTTTTTCAAGAGAA
CCATTCAGAAAAACGCTCAGTATATGTGTTTGCAAAGCAAGAACTGTATC
GTTGATAAAAGGAGACGAAATAGATGTCAGTATTGTAGGTTTCAAAAATG
TCTCAAAGTTGGTATGGTTAAAGAAGTCGTAAGGAGTGACAGTTTCAAAG
GACGTCGAGGAAGATTAAGTTCGAAAACCAGAATAAGAGCTGGTTCAGCA
AATGTTGGAAACGGTTGGGATTCATGTAGTCGAGATGTACCTGGAGGAGG
TAGTGGAAGCTATGTGACATTACTATCGATTTTAACGAAACATTTCGAGG
TATTTTGTAATAGACCGGTTTGGAGAGCCATAAAATATGAAGACTCATTA
GAGGGATCGACTATTTTAATATTAAAGGAATTTCTTCTAACTTTGGAATC
ATCAGTACAAGACGTTCGACAATACACAAAAAATATTCCAGGATTCGTAG
ATTTACAATTAACCGATCAGGACTTAATCATAAAGCTTCATGCATTGGAT
ATAATCCTTCTGAAATTGGCTTTAAGATTATTAAATAAACCTCTCTCAGT
GGTCGACAGTCATCAAACAAGCATGAGATCTATTTTAGATGACTTACGAC
ACGTGGGACTTGTAGACTGGGTTGATAATATATATAAATTAAGCGAATCC
TTATCAGAATTCGTACACGACGATATGAACATCATGGCTGGTCTAGCTGC
AATAATGATGGTCAATTTTAAATCAATCAACAAGCAAATGCAGTTCAAAA
ACCCCAGCGACATATATGCACTGCAACATCGATTCATAGAGATGCTTAAA
ACTCATTGCTGTGGACCAACTCAAAATCAGCAGATATTTTCTACAGTAAC
CGAATACAACGAAGATCAATGCAAAAATCAACAGATTGACTGTAATAAAT
CCAATACCAGTTCAAATGATACGTTATCCTTAGCAGCTAACGATTCCACA
TTTTTTTCAAGAGCTCTTAATCACAAAGATACGATAAGAAACGTAAATCA
AAACTTTTTAATACCAAATCTCCACAGTTTACAAACTCACCATGAATCAT
TGAATTATGGACATGATCTAAATTTTGACTTTCTTACTGATATCCTAGCA
ATGAATCGATTCTGACGACCCACATTGAAATGCATTTTTGCTTATTAATA
AAACTATCATTTGTATACTATATATGAAAAATGAGCTTATGTCGATAGAT
GTAGATTAATATTGTAAATACAAAAAATTAGACCATTAAAATAAA

protein sequence of SMED30004876-orf-1

>SMED30004876-orf-1 ID=SMED30004876-orf-1|Name=SMED30004876-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=849bp
MESKNMVTVESLMPDTKPDHTQLYLLSQHPMLTRYENYSNMLPYSNNLSD
QSFALSDTNSNCAPLPSLFSSTHLDSNSLNFSLSLPQLSGNESHINSMTT
DDIYMSSKSCSTSQNNTINNQASDVNMFNKSELNSNNLDSDFNVQNFMTH
NNFSRNQEFTILDTSIQNCSFNIRPNQVGSPCFIQKQNTDSHFLPQLTGP
HSRDSDWSNSHLMVPSLMNNLSFFENSPSMMINSQKDDYERMYSVDNYSH
PTTLNFLSPELGFTISDSPYQEFCDSLWRQSRANIRSQKDGSKEQLDSRM
PLISDDMSYSEKTNNFLNEIARDQKSFENLPNSCLINIKDNDDKSDLGFG
FHLNDFGGSHISHLQSGLGVVNSNSNFNLNVFTTQTPSFSLPASISELGP
TSIPSTGMLCVPSSSSSSSHGMANNSVSEHTDSYTDYSQYDTSRIDVNQL
CLVCGDTAACQHYGVRTCEGCKGFFKRTIQKNAQYMCLQSKNCIVDKRRR
NRCQYCRFQKCLKVGMVKEVVRSDSFKGRRGRLSSKTRIRAGSANVGNGW
DSCSRDVPGGGSGSYVTLLSILTKHFEVFCNRPVWRAIKYEDSLEGSTIL
ILKEFLLTLESSVQDVRQYTKNIPGFVDLQLTDQDLIIKLHALDIILLKL
ALRLLNKPLSVVDSHQTSMRSILDDLRHVGLVDWVDNIYKLSESLSEFVH
DDMNIMAGLAAIMMVNFKSINKQMQFKNPSDIYALQHRFIEMLKTHCCGP
TQNQQIFSTVTEYNEDQCKNQQIDCNKSNTSSNDTLSLAANDSTFFSRAL
NHKDTIRNVNQNFLIPNLHSLQTHHESLNYGHDLNFDFLTDILAMNRF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0042025	host cell nucleus
GO:0005634	nucleus

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000101	muscle cell
PLANA:0000418	head

Vocabulary: **INTERPRO**
Term	Definition
IPR035500	NHR-like_dom_sf
IPR001628	Znf_hrmn_rcpt
IPR001723	Nuclear_hrmn_rcpt
IPR000536	Nucl_hrmn_rcpt_lig-bd
IPR013088	Znf_NHR/GATA

Vocabulary: **molecular function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0003677	DNA binding
GO:0003707	steroid hormone receptor activity
GO:0046872	metal ion binding

Vocabulary: **biological process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0043401	steroid hormone mediated signaling pathway
GO:0006351	transcription, DNA-templated

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001628	Zinc finger, nuclear hormone receptor-type	PRINTS	PR00047	STROIDFINGER	coord: 467..482 score: 64.3 coord: 500..508 score: 65.67 coord: 451..467 score: 50.97 coord: 508..516 score: 63.69
IPR001628	Zinc finger, nuclear hormone receptor-type	SMART	SM00399	c4gold	coord: 448..519 e-value: 9.0E-39 score: 144.8
IPR001628	Zinc finger, nuclear hormone receptor-type	PFAM	PF00105	zf-C4	coord: 449..518 e-value: 6.0E-31 score: 106.7
IPR001628	Zinc finger, nuclear hormone receptor-type	PROSITE	PS00031	NUCLEAR_REC_DBD_1	coord: 451..477
IPR001628	Zinc finger, nuclear hormone receptor-type	PROSITE	PS51030	NUCLEAR_REC_DBD_2	coord: 448..523 score: 20.327
IPR001723	Nuclear hormone receptor	PRINTS	PR00398	STRDHORMONER	coord: 512..522 score: 52.32 coord: 629..645 score: 28.94 coord: 608..629 score: 26.18
IPR035500	Nuclear hormone receptor-like domain superfamily	GENE3D	G3DSA:1.10.565.10		coord: 576..762 e-value: 1.1E-19 score: 72.6
IPR035500	Nuclear hormone receptor-like domain superfamily	SUPERFAMILY	SSF48508	Nuclear receptor ligand-binding domain	coord: 500..750
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 441..546 e-value: 3.1E-32 score: 112.7
None	No IPR available	PANTHER	PTHR24085	NUCLEAR HORMONE RECEPTOR	coord: 76..755
None	No IPR available	CDD	cd06969	NR_DBD_NGFI-B	coord: 449..522 e-value: 5.13733E-51 score: 170.704
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 448..527

Main menu

Nuclear receptor subfamily 4 group A

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

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