Actin

Overview


Name	Actin
Smed ID	SMED30004773
Length (bp)	4512

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Actin (SMED30004773) t-SNE clustered cells

Violin plots show distribution of expression levels for Actin (SMED30004773) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Actin (SMED30004773) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Actin (SMED30004773) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30004773

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
intestinal phagocyte	SMED30004773	h1SMcG0016691	Contig5997	uc_Smed_v2	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30004773	h1SMcG0016691	Contig5997	newmark_ests	PMID:23079596 Forsthoefel et al., 2012
dorsal ventral margin of the whole animal	SMED30004773	h1SMcG0016691	dd_Smed_v4_15615_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Actin vs. Ensembl Human
Match: ACTG1 (actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144])

HSP 1 Score: 192.2 bits (487), Expect = 6.252e-55
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Human
Match: ACTB (actin beta [Source:HGNC Symbol;Acc:HGNC:132])

HSP 1 Score: 191.045 bits (484), Expect = 1.536e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Human
Match: ACTG1 (actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144])

HSP 1 Score: 191.045 bits (484), Expect = 1.739e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Celegans
Match: act-4 (Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986])

HSP 1 Score: 191.43 bits (485), Expect = 4.037e-53
Identity = 95/173 (54.91%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TG+V +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   20 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 192

[Close]

BLAST of Actin vs. Ensembl Celegans
Match: act-2 (Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984])

HSP 1 Score: 191.43 bits (485), Expect = 5.157e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Celegans
Match: act-4 (Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986])

HSP 1 Score: 191.045 bits (484), Expect = 7.556e-53
Identity = 95/173 (54.91%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TG+V +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Fly
Match: Act57B (gene:FBgn0000044 transcript:FBtr0071519)

HSP 1 Score: 191.815 bits (486), Expect = 5.459e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Fly
Match: Act42A (gene:FBgn0000043 transcript:FBtr0086029)

HSP 1 Score: 191.43 bits (485), Expect = 6.800e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Fly
Match: Act5C (gene:FBgn0000042 transcript:FBtr0070822)

HSP 1 Score: 191.045 bits (484), Expect = 7.698e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Fly
Match: Act5C (gene:FBgn0000042 transcript:FBtr0100662)

HSP 1 Score: 191.045 bits (484), Expect = 7.698e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Fly
Match: Act5C (gene:FBgn0000042 transcript:FBtr0345894)

HSP 1 Score: 191.045 bits (484), Expect = 7.698e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Zebrafish
Match: actb1 (actin, beta 1 [Source:NCBI gene;Acc:57934])

HSP 1 Score: 191.815 bits (486), Expect = 9.973e-55
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Zebrafish
Match: actb1 (actin, beta 1 [Source:NCBI gene;Acc:57934])

HSP 1 Score: 191.045 bits (484), Expect = 1.816e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Zebrafish
Match: actb1 (actin, beta 1 [Source:NCBI gene;Acc:57934])

HSP 1 Score: 191.045 bits (484), Expect = 1.045e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Zebrafish
Match: actb2 (actin, beta 2 [Source:NCBI gene;Acc:57935])

HSP 1 Score: 191.045 bits (484), Expect = 1.194e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Xenopus
Match: actg1 (actin gamma 1 [Source:NCBI gene;Acc:394957])

HSP 1 Score: 191.045 bits (484), Expect = 1.419e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Xenopus
Match: actb (actin, beta [Source:NCBI gene;Acc:407952])

HSP 1 Score: 191.045 bits (484), Expect = 1.561e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Xenopus
Match: acta2 (actin, alpha 2, smooth muscle, aorta [Source:NCBI gene;Acc:496696])

HSP 1 Score: 185.267 bits (469), Expect = 1.259e-50
Identity = 94/173 (54.34%), Postives = 116/173 (67.05%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I+++S YNEL+  PE+      EA LN K  RE++ Q+MFET N   MYV +Q ++SLYA G  TGIV +SGD V +  PIYE Y L H I R++LA +D TDYL+KILTERG  F  T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE 207

[Close]

BLAST of Actin vs. Ensembl Xenopus
Match: acta2 (actin, alpha 2, smooth muscle, aorta [Source:NCBI gene;Acc:496696])

HSP 1 Score: 185.267 bits (469), Expect = 1.747e-50
Identity = 94/173 (54.34%), Postives = 116/173 (67.05%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I+++S YNEL+  PE+      EA LN K  RE++ Q+MFET N   MYV +Q ++SLYA G  TGIV +SGD V +  PIYE Y L H I R++LA +D TDYL+KILTERG  F  T++
Sbjct:   32 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE 204

[Close]

BLAST of Actin vs. Ensembl Xenopus
Match: acta2 (actin, alpha 2, smooth muscle, aorta [Source:NCBI gene;Acc:496696])

HSP 1 Score: 184.496 bits (467), Expect = 2.170e-50
Identity = 94/173 (54.34%), Postives = 116/173 (67.05%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I+++S YNEL+  PE+      EA LN K  RE++ Q+MFET N   MYV +Q ++SLYA G  TGIV +SGD V +  PIYE Y L H I R++LA +D TDYL+KILTERG  F  T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE 207

[Close]

BLAST of Actin vs. Ensembl Mouse
Match: Actg1 (actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:87906])

HSP 1 Score: 192.971 bits (489), Expect = 1.399e-54
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   90 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 262

[Close]

BLAST of Actin vs. Ensembl Mouse
Match: Actb (actin, beta [Source:MGI Symbol;Acc:MGI:87904])

HSP 1 Score: 191.43 bits (485), Expect = 4.060e-54
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Mouse
Match: Actb (actin, beta [Source:MGI Symbol;Acc:MGI:87904])

HSP 1 Score: 191.045 bits (484), Expect = 1.054e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Mouse
Match: Actg1 (actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:87906])

HSP 1 Score: 191.045 bits (484), Expect = 1.194e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. UniProt/SwissProt
Match: sp|P69003|ACT1_HELTB (Actin CyI, cytoplasmic OS=Heliocidaris tuberculata OX=7635 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.897e-53
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. UniProt/SwissProt
Match: sp|P69002|ACT1_HELER (Actin CyI, cytoplasmic OS=Heliocidaris erythrogramma OX=7634 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.897e-53
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. UniProt/SwissProt
Match: sp|P30170|ACT10_SOLTU (Actin-85C (Fragment) OS=Solanum tuberosum OX=4113 GN=AC85C PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.335e-53
Identity = 93/173 (53.76%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRH   M+ MGQKD+YV +EAQ    ILTL Y IE+G  +N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TD+L+KILTERG  FT T++
Sbjct:   15 SIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAE 187

[Close]

BLAST of Actin vs. UniProt/SwissProt
Match: sp|Q07903|ACTC_STRPU (Actin, cytoskeletal 2A OS=Strongylocentrotus purpuratus OX=7668 GN=CYIIA PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.944e-53
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. UniProt/SwissProt
Match: sp|P53474|ACTE_STRPU (Actin, cytoskeletal 3A OS=Strongylocentrotus purpuratus OX=7668 GN=CYIIIA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.334e-53
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. TrEMBL
Match: B3XZG4 (Actin (Fragment) OS=Pseudocentrotus depressus OX=7678 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.126e-53
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   19 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 191

[Close]

BLAST of Actin vs. TrEMBL
Match: I6ZGN7 (Beta-actin (Fragment) OS=Petrosia ficiformis OX=68564 GN=act PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 9.523e-53
Identity = 97/173 (56.07%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. TrEMBL
Match: Q6ZYL2 (Actin (Fragment) OS=Arion lusitanicus OX=236853 GN=act PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.028e-52
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL   PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   20 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVFDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 192

[Close]

BLAST of Actin vs. TrEMBL
Match: A0A2B4S264 (Actin, cytoplasmic OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene12875 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.801e-52
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. TrEMBL
Match: A0A1B4Z306 (Actin (Fragment) OS=Mesocentrotus nudus OX=7666 GN=ACT PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.912e-52
Identity = 98/171 (57.31%), Postives = 119/171 (69.59%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTIT 2588
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIVF+SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T
Sbjct:   12 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 182

[Close]

BLAST of Actin vs. Ensembl Cavefish
Match: actb1 (actin, cytoplasmic 1 [Source:NCBI gene;Acc:103039558])

HSP 1 Score: 191.045 bits (484), Expect = 8.852e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Cavefish
Match: actb2 (actin beta [Source:NCBI gene;Acc:103030443])

HSP 1 Score: 191.045 bits (484), Expect = 1.012e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Cavefish
Match: actb1 (actin, cytoplasmic 1 [Source:NCBI gene;Acc:103039558])

HSP 1 Score: 190.66 bits (483), Expect = 1.254e-52
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 207

[Close]

BLAST of Actin vs. Ensembl Cavefish
Match: acta2 (actin alpha 2, smooth muscle [Source:NCBI gene;Acc:103040556])

HSP 1 Score: 184.882 bits (468), Expect = 1.494e-50
Identity = 94/173 (54.34%), Postives = 116/173 (67.05%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I+++S YNEL+  PE+      EA LN K  RE++ Q+MFET N   MYV +Q ++SLYA G  TGIV +SGD V +  PIYE Y L H I R++LA +D TDYL+KILTERG  F  T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE 207

[Close]

BLAST of Actin vs. Ensembl Cavefish
Match: zgc:86709 (actin, alpha cardiac muscle 1 [Source:NCBI gene;Acc:103031734])

HSP 1 Score: 183.726 bits (465), Expect = 2.939e-50
Identity = 93/173 (53.76%), Postives = 116/173 (67.05%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+      EA LN K  RE++ Q+MFET N   MYV +Q ++SLYA G  TGIV +SGD V +  PIYE Y L H I R++LA +D TDYL+KILTERG  F  T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE 207

[Close]

BLAST of Actin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011113.1 (pep scaffold:Pmarinus_7.0:GL498954:115:1245:1 gene:ENSPMAG00000010086.1 transcript:ENSPMAT00000011113.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 191.045 bits (484), Expect = 1.933e-53
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004586.1 (pep scaffold:Pmarinus_7.0:GL479516:23873:27955:-1 gene:ENSPMAG00000004161.1 transcript:ENSPMAT00000004586.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 185.652 bits (470), Expect = 1.300e-51
Identity = 94/173 (54.34%), Postives = 118/173 (68.21%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV  P HQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET N+  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGHPLHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011230.1 (pep scaffold:Pmarinus_7.0:GL476986:121012:122166:1 gene:ENSPMAG00000010203.1 transcript:ENSPMAT00000011230.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 105.145 bits (261), Expect = 4.508e-24
Identity = 59/184 (32.07%), Postives = 95/184 (51.63%), Query Frame = 3

Query: 2070 ILSIVCRPRHQVAMI*---------MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            + S+V RPR +  M+           G    Y+  +A C   +L+L Y +E G     D  E ++ ++   EL A P+ Q V   EA LN    RE+  Q++FE   +  +++ +Q ++SLYA G  TG+    GD V +  P++E Y L   + R ++A +D TD L +IL ERG  F  +++
Sbjct:   33 VPSLVGRPRQRDTMLVSRGLDDAGGSGDGGCYIGRQALCRRGVLSLRYPVERGIVTRWDDMERVWAHAYEAELHARPQDQPVLLTEAPLNPLENREQAAQLLFERFGAPAVHIAVQAVLSLYASGMVTGLAVGVGDGVTHAVPVFEGYGLPRAVLRSDVAGRDVTDNLGRILAERGHAFVSSAE 216

[Close]

BLAST of Actin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008200.1 (pep scaffold:Pmarinus_7.0:GL477804:3783:17322:1 gene:ENSPMAG00000007412.1 transcript:ENSPMAT00000008200.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 85.5001 bits (210), Expect = 2.767e-18
Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = 3

Query: 2127 KDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMY-NELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYA-PGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKIL 2558
            KD  V ++A     +L +NY +ENG   N D  ++++ Y+   ++L     + ++   E  +N    RE+II++MFE      +Y+ +Q +++LYA  G  TG+V +SGD V +  P+YE + L H   R+++A +D T YLIK+L
Sbjct:   37 KDLMVGDDASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPDKLNVNTRECKILLTEPPMNPMKNREKIIEVMFEQYGFSAVYIAIQAVLTLYAQAGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKVL 182

[Close]

BLAST of Actin vs. Ensembl Sea Lamprey
Match: actl6a (actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36])

HSP 1 Score: 56.6102 bits (135), Expect = 1.050e-8
Identity = 33/123 (26.83%), Postives = 62/123 (50.41%), Query Frame = 3

Query: 2166 EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDF 2534
            E + +   ++NG   + D  + I  ++    +K+ P+   V  +EA  N + KRE + ++MFE  N    ++    +++ +A G +T +V +SG       P+++ YVL   I +  LA  DF
Sbjct:   87 EGMEVTSPLKNGMIEDWDCFQAILDHTYKRNIKSEPDLHPVLMSEAPWNARGKRERLTELMFEHYNIPAFFLCKSAVLTAFANGRSTALVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG-DF 208

[Close]

BLAST of Actin vs. Ensembl Yeast
Match: ACT1 (Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions [Source:SGD;Acc:S000001855])

HSP 1 Score: 177.178 bits (448), Expect = 6.525e-49
Identity = 88/173 (50.87%), Postives = 117/173 (67.63%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA +N K  RE++ Q+MFET N    YV++Q ++SLY+ G  TGIV +SGD V +  PIY  + L H I R++LA +D TDYL+KIL+ERG  F+ T++
Sbjct:   33 SIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAE 205

[Close]

BLAST of Actin vs. Ensembl Yeast
Match: ARP2 (Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; required for efficient Golgi-to-ER trafficking in COPI mutants [Source:SGD;Acc:S000002187])

HSP 1 Score: 93.2041 bits (230), Expect = 2.248e-20
Identity = 58/183 (31.69%), Postives = 99/183 (54.10%), Query Frame = 3

Query: 2076 SIVCRP---RHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQ--RVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQLHEAK 2609
            SIV RP     + A +    KD  + +EA      L ++Y +ENG   N    E ++ Y+ + ++K LP     ++   E  +N    RE++ ++MFE  +   +YV +Q +++LYA G ++G+V +SGD V +  P+YE  VL H   R+++A +D T +LI +L+ RG  F  T+     +
Sbjct:   32 SIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMK-LPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGYAFNRTADFETVR 213

[Close]

BLAST of Actin vs. Ensembl Yeast
Match: ARP1 (Actin-related protein of the dynactin complex; required for spindle orientation and nuclear migration; forms actin-like short filament composed of 9 or 10 Arp1p monomers; putative ortholog of mammalian centractin [Source:SGD;Acc:S000001171])

HSP 1 Score: 75.485 bits (184), Expect = 1.265e-14
Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 3

Query: 2124 QKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPE--KQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYL 2546
            Q D+++ N AQ    +L L Y I++G   + D  E I+ Y + NE+  L    +  +   EA +N    RE++ Q++FET +   +YV+   ++SLYA G  TG V + G+   +T PIY+ + L  ++ RM++   D T+ L
Sbjct:   56 QGDTFIGNNAQKLRGLLKLRYPIKHGVVEDWDSMELIWSYVL-NEVLQLQNIGEHPLLITEAPMNPLKNREQMAQVLFETFDVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQL 197

[Close]

BLAST of Actin vs. Ensembl Yeast
Match: ARP3 (Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity [Source:SGD;Acc:S000003826])

HSP 1 Score: 63.5438 bits (153), Expect = 1.145e-10
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 3

Query: 2175 TLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIM--------SLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERG 2570
            +L+Y I +G   N D+ E  +  S++  L+  PE       E  LN    RE++ ++ FE+ N   +Y+ +Q ++        S       TG V +SGD V +  P+ E YV+   I  + +A +D T ++  +L ERG
Sbjct:  111 SLSYPIRHGQVENWDHMERFWENSIFKYLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDITLFIQSLLRERG 250

[Close]

BLAST of Actin vs. Ensembl Nematostella
Match: EDO38006 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEB1])

HSP 1 Score: 192.971 bits (489), Expect = 6.947e-54
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Nematostella
Match: EDO37976 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEA7])

HSP 1 Score: 192.586 bits (488), Expect = 9.229e-54
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Nematostella
Match: EDO45013 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RU31])

HSP 1 Score: 192.586 bits (488), Expect = 9.891e-54
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Nematostella
Match: EDO38520 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCN8])

HSP 1 Score: 192.586 bits (488), Expect = 1.194e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206

[Close]

BLAST of Actin vs. Ensembl Nematostella
Match: EDO42646 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0V7])

HSP 1 Score: 192.586 bits (488), Expect = 1.197e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Medaka
Match: ENSORLT00000021726.2 (actin, cytoplasmic [Source:NCBI gene;Acc:101155523])

HSP 1 Score: 192.586 bits (488), Expect = 2.744e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Medaka
Match: actb (cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:100049433])

HSP 1 Score: 191.815 bits (486), Expect = 5.751e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   35 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 207

[Close]

BLAST of Actin vs. Ensembl Medaka
Match: actb (cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:100049433])

HSP 1 Score: 192.2 bits (487), Expect = 6.161e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Medaka
Match: actb (cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:100049433])

HSP 1 Score: 191.43 bits (485), Expect = 6.239e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Ensembl Medaka
Match: actb (cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:100049433])

HSP 1 Score: 192.971 bits (489), Expect = 9.320e-53
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I R++LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205

[Close]

BLAST of Actin vs. Planmine SMEST
Match: SMESG000077923.1 (SMESG000077923.1)

HSP 1 Score: 342.043 bits (876), Expect = 1.449e-103
Identity = 191/300 (63.67%), Postives = 218/300 (72.67%), Query Frame = 3

Query: 2946 LIVLFYQGFPHVYYKTINNSAGFCSNIPNVFKCEVECKMNGVFVTLGSSIAPSSLPEEYQALYVNIRFVKRLITFNYIYLTEN---ITCLCNGSF----HITPYKQFTVSRFLLVKKDFVNPTIEHNYNNITKVYNLKCNFPHPRGNLHFYIECNGQIGFVNEWLIGENVLKLNYGDLGKSIMCFCDMRFPYFTVLTKSLKILFHLPPNEVFIIPSRTNINDTLVCDYKFGE------------------NRSSGNFLTNFGKYLFQNLFVDSNNNLKLSYELLIINITCYCEVTFHSVH 3770
            +IV++ Q  P  +Y+ +  ++   +NI  +F C  +  +    V LG      +  +E +  Y ++   K ++    IYLTE+   ++C+C  +     H   Y+ F +S+      DFVNPTIEHNYNNITKVYNLKCNFPHPRGNLHFYIECNGQIGFVNEWLIGENVLKLNYGDLGKSIMCFCDMRFPYFTVLTKSLKILFHLPPNEVFIIPSRTNINDTLVCDYKFGE                  NRSSGNFLTNFGKYLFQNLFVDSNNNLKLSYELLIINITCYCEVTFHSVH
Sbjct:  171 IIVMYPQPIP--WYENVTCTSEVTTNIDYIFLCFWKKNL----VQLGIENITHNFDKEERIQYKSLVVDKNVLA---IYLTESPKSLSCVCRVTVSFGTHFNIYQPFLISQI-----DFVNPTIEHNYNNITKVYNLKCNFPHPRGNLHFYIECNGQIGFVNEWLIGENVLKLNYGDLGKSIMCFCDMRFPYFTVLTKSLKILFHLPPNEVFIIPSRTNINDTLVCDYKFGEYKSHDWYCQINNRFLLLRNRSSGNFLTNFGKYLFQNLFVDSNNNLKLSYELLIINITCYCEVTFHSVH 456

HSP 2 Score: 149.443 bits (376), Expect = 2.807e-37
Identity = 93/175 (53.14%), Postives = 111/175 (63.43%), Query Frame = 3

Query: 3060 MNGVFVTLGSSIAPSSLPEEYQALYVNIRFVKRLITFNYIYLTENITCLCNGSFHITPYKQFTVSRFLLVKKDF-------------VNPTIEHNYNNITKVYNLKCNFPHPRGNLHFYIECNGQIGFVNEWLIGENVLKLNYGDLGKSIMCFCDMRFPYFTVLTKSLKILFHLP 3545
            MNGVFVTLGSSIAPSSLPEEYQALYVNIRFVKRLITFNYIYLTENITCLCNGSFHITPYKQFTVSRF LVKKD              VN T ++  +N+       C F     +   Y+  N +  F N  ++ +  LK N+ + G+S  C C+ R  Y  +   S+ +   +P
Sbjct:    1 MNGVFVTLGSSIAPSSLPEEYQALYVNIRFVKRLITFNYIYLTENITCLCNGSFHITPYKQFTVSRFRLVKKDIPLIILNPSNPVFNVNITCKYTISNVVVFCKWSCLFCSTNESYSRYLCINTK--FYNSVILFD--LKFNF-ESGESCTCICETRHFYPKLHNISINLPLKIP 170

[Close]

BLAST of Actin vs. Planmine SMEST
Match: SMESG000077924.1 (SMESG000077924.1)

HSP 1 Score: 338.191 bits (866), Expect = 2.466e-103
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1

Query: 4024 INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP 4512
            INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP
Sbjct:  244 INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP 406

[Close]

BLAST of Actin vs. Planmine SMEST
Match: SMESG000077924.1 (SMESG000077924.1)

HSP 1 Score: 337.035 bits (863), Expect = 1.951e-101
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1

Query: 4024 INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP 4512
            INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP
Sbjct:  357 INNYHIKLKEIDLNLYFMYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNPLVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSVEIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP 519

[Close]

BLAST of Actin vs. Planmine SMEST
Match: SMESG000077922.1 (SMESG000077922.1)

HSP 1 Score: 256.529 bits (654), Expect = 5.378e-79
Identity = 123/128 (96.09%), Postives = 124/128 (96.88%), Query Frame = 3

Query: 2247 MYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQLHEAKYPRIKQT 2630
            MYNELKALPEKQRVW NEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAK FTDYLIKILTERGC FTIT QL+EAKYPRIKQT
Sbjct:    1 MYNELKALPEKQRVWKNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKGFTDYLIKILTERGCSFTITPQLYEAKYPRIKQT 128

[Close]

BLAST of Actin vs. Planmine SMEST
Match: SMESG000012317.1 (SMESG000012317.1)

HSP 1 Score: 192.971 bits (489), Expect = 1.332e-53
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 3

Query: 2076 SIVCRPRHQVAMI*MGQKDSYV*NEAQCD*EILTLNYTIENGYEANRDYSENIFYYSMYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTIMSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYLIKILTERGCRFTITSQ 2594
            SIV RPRHQ  M+ MGQKDSYV +EAQ    ILTL Y IE+G   N D  E I++++ YNEL+  PE+  V   EA LN K  RE++ Q+MFET NS  MYV +Q ++SLYA G  TGIV +SGD V +T PIYE Y L H I RM+LA +D TDYL+KILTERG  FT T++
Sbjct:   33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKILTERGYSFTTTAE 205

The following BLAST results are available for this feature:

BLAST of Actin vs. Ensembl Human
BLAST of Actin vs. Ensembl Celegans
BLAST of Actin vs. Ensembl Fly
BLAST of Actin vs. Ensembl Zebrafish
BLAST of Actin vs. Ensembl Xenopus
BLAST of Actin vs. Ensembl Mouse
BLAST of Actin vs. UniProt/SwissProt
BLAST of Actin vs. TrEMBL
BLAST of Actin vs. Ensembl Cavefish
BLAST of Actin vs. Ensembl Sea Lamprey
BLAST of Actin vs. Ensembl Yeast
BLAST of Actin vs. Ensembl Nematostella
BLAST of Actin vs. Ensembl Medaka
BLAST of Actin vs. Planmine SMEST

BLAST of Actin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ACTG1	6.252e-55	55.49	actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]	[more]
ACTG1	6.252e-55	55.49	actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]	[more]
ACTB	1.536e-52	55.49	actin beta [Source:HGNC Symbol;Acc:HGNC:132]	[more]
ACTB	1.536e-52	55.49	actin beta [Source:HGNC Symbol;Acc:HGNC:132]	[more]
ACTG1	1.739e-52	55.49	actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]	[more]

BLAST of Actin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
act-4	4.037e-53	54.91	Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]	[more]
act-2	5.157e-53	55.49	Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]	[more]
act-2	5.157e-53	55.49	Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]	[more]
act-2	5.157e-53	55.49	Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]	[more]
act-4	7.556e-53	54.91	Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]	[more]

BLAST of Actin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Act57B	5.459e-53	56.07	gene:FBgn0000044 transcript:FBtr0071519	[more]
Act42A	6.800e-53	55.49	gene:FBgn0000043 transcript:FBtr0086029	[more]
Act5C	7.698e-53	55.49	gene:FBgn0000042 transcript:FBtr0070822	[more]
Act5C	7.698e-53	55.49	gene:FBgn0000042 transcript:FBtr0100662	[more]
Act5C	7.698e-53	55.49	gene:FBgn0000042 transcript:FBtr0345894	[more]

BLAST of Actin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
actb1	9.973e-55	55.49	actin, beta 1 [Source:NCBI gene;Acc:57934]	[more]
actb1	1.816e-53	55.49	actin, beta 1 [Source:NCBI gene;Acc:57934]	[more]
actb1	1.045e-52	55.49	actin, beta 1 [Source:NCBI gene;Acc:57934]	[more]
actb1	1.045e-52	55.49	actin, beta 1 [Source:NCBI gene;Acc:57934]	[more]
actb2	1.194e-52	55.49	actin, beta 2 [Source:NCBI gene;Acc:57935]	[more]

BLAST of Actin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
actg1	1.419e-52	55.49	actin gamma 1 [Source:NCBI gene;Acc:394957]	[more]
actb	1.561e-52	55.49	actin, beta [Source:NCBI gene;Acc:407952]	[more]
acta2	1.259e-50	54.34	actin, alpha 2, smooth muscle, aorta [Source:NCBI ...	[more]
acta2	1.747e-50	54.34	actin, alpha 2, smooth muscle, aorta [Source:NCBI ...	[more]
acta2	2.170e-50	54.34	actin, alpha 2, smooth muscle, aorta [Source:NCBI ...	[more]

BLAST of Actin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Actg1	1.399e-54	55.49	actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc...	[more]
Actb	4.060e-54	55.49	actin, beta [Source:MGI Symbol;Acc:MGI:87904]	[more]
Actb	1.054e-52	55.49	actin, beta [Source:MGI Symbol;Acc:MGI:87904]	[more]
Actg1	1.194e-52	55.49	actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc...	[more]
Actg1	1.194e-52	55.49	actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc...	[more]

BLAST of Actin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P69003\|ACT1_HELTB	1.897e-53	56.65	Actin CyI, cytoplasmic OS=Heliocidaris tuberculata...	[more]
sp\|P69002\|ACT1_HELER	1.897e-53	56.65	Actin CyI, cytoplasmic OS=Heliocidaris erythrogram...	[more]
sp\|P30170\|ACT10_SOLTU	2.335e-53	53.76	Actin-85C (Fragment) OS=Solanum tuberosum OX=4113 ...	[more]
sp\|Q07903\|ACTC_STRPU	2.944e-53	56.65	Actin, cytoskeletal 2A OS=Strongylocentrotus purpu...	[more]
sp\|P53474\|ACTE_STRPU	3.334e-53	56.65	Actin, cytoskeletal 3A OS=Strongylocentrotus purpu...	[more]

BLAST of Actin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
B3XZG4	1.126e-53	56.65	Actin (Fragment) OS=Pseudocentrotus depressus OX=7...	[more]
I6ZGN7	9.523e-53	56.07	Beta-actin (Fragment) OS=Petrosia ficiformis OX=68...	[more]
Q6ZYL2	3.028e-52	56.07	Actin (Fragment) OS=Arion lusitanicus OX=236853 GN...	[more]
A0A2B4S264	3.801e-52	56.65	Actin, cytoplasmic OS=Stylophora pistillata OX=504...	[more]
A0A1B4Z306	5.912e-52	57.31	Actin (Fragment) OS=Mesocentrotus nudus OX=7666 GN...	[more]

BLAST of Actin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
actb1	8.852e-53	55.49	actin, cytoplasmic 1 [Source:NCBI gene;Acc:1030395...	[more]
actb2	1.012e-52	55.49	actin beta [Source:NCBI gene;Acc:103030443]	[more]
actb1	1.254e-52	55.49	actin, cytoplasmic 1 [Source:NCBI gene;Acc:1030395...	[more]
acta2	1.494e-50	54.34	actin alpha 2, smooth muscle [Source:NCBI gene;Acc...	[more]
zgc:86709	2.939e-50	53.76	actin, alpha cardiac muscle 1 [Source:NCBI gene;Ac...	[more]

BLAST of Actin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000011113.1	1.933e-53	55.49	pep scaffold:Pmarinus_7.0:GL498954:115:1245:1 gene...	[more]
ENSPMAT00000004586.1	1.300e-51	54.34	pep scaffold:Pmarinus_7.0:GL479516:23873:27955:-1 ...	[more]
ENSPMAT00000011230.1	4.508e-24	32.07	pep scaffold:Pmarinus_7.0:GL476986:121012:122166:1...	[more]
ENSPMAT00000008200.1	2.767e-18	34.25	pep scaffold:Pmarinus_7.0:GL477804:3783:17322:1 ge...	[more]
actl6a	1.050e-8	26.83	actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]	[more]

BLAST of Actin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4


Match Name	E-value	Identity	Description
ACT1	6.525e-49	50.87	Actin; structural protein involved in cell polariz...	[more]
ARP2	2.248e-20	31.69	Essential component of the Arp2/3 complex; Arp2/3 ...	[more]
ARP1	1.265e-14	32.87	Actin-related protein of the dynactin complex; req...	[more]
ARP3	1.145e-10	29.29	Essential component of the Arp2/3 complex; Arp2/3 ...	[more]

BLAST of Actin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO38006	6.947e-54	56.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37976	9.229e-54	56.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45013	9.891e-54	56.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38520	1.194e-53	56.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO42646	1.197e-53	56.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Actin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000021726.2	2.744e-53	56.07	actin, cytoplasmic [Source:NCBI gene;Acc:101155523...	[more]
actb	5.751e-53	56.07	cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:1000...	[more]
actb	6.161e-53	56.07	cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:1000...	[more]
actb	6.239e-53	56.07	cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:1000...	[more]
actb	9.320e-53	56.07	cytoplasmic actin OlCA1 [Source:NCBI gene;Acc:1000...	[more]

BLAST of Actin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000077923.1	1.449e-103	63.67	SMESG000077923.1	[more]
SMESG000077924.1	2.466e-103	100.00	SMESG000077924.1	[more]
SMESG000077924.1	1.951e-101	100.00	SMESG000077924.1	[more]
SMESG000077922.1	5.378e-79	96.09	SMESG000077922.1	[more]
SMESG000012317.1	1.332e-53	56.65	SMESG000012317.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence
protein sequence
protein sequence
protein sequence

transcript sequence

>SMED30004773 ID=SMED30004773|Name=Actin|organism=Schmidtea mediterranea sexual|type=transcript|length=4512bp
CACAATTTTATTTATTTTAATATCAATTATAATTATGCTGGGACAAGTTG
ATATTTTCTATTTTCACATATAAATGGTAGTAAGCATTAACTTTCTTACT
TATATTTAAAATTCTTTTTAATTTTCACCAAATTTTTGAAGTACGGAAAG
GTTAAATATTAAAATATAAATTATTTTAATATTCTGACAGTTTCTGTTAT
TGTTATTTTATGAAATATTTGCAATCTCTTTGCCAAAGAAATAAACAGTA
TTGTATAATATTTTATATTTTGTTGCTTACTATGGAAACAAAGTGCTATA
TGACGATTAATTTTGCGAATGTTAGTATAGGAAATACAGCTGAATGTATT
TTATATCATGATACCCCAGTAGTATATAACATTACTTTAAAAGCTGAACT
CAACGGTCATGAAATACTTTTACCTAGTAAAGGGTTCCCTTATTTGTCGG
ATTTTGACAATAAATACGTTTTGCCCAATCTCATTGCTTTTAATACCAGA
TTTTTAAAAATTCAAATTGAATTTATTCCTTATAAACTACCATTAATTTG
TGTTATTTTAGAAAAGTATTATTTTGTCACCAAATACATTCATTCAACAG
GTTTGATGGCACTATTTGTTATGCAAATAATTGAATTTTTAATTAATTCT
TAGCATAATAATTTAATTATTCTCATTATACAAATGGTTTCGGTCAGTAA
TTCTTATTCTGAAGCAAAATAAAACCCAATCATATTACATTGCGGATACT
TGTTATTGATGTGAGCTATAATGACAATTACTTAGAGTCCCAATAATATA
AATTAAATTAACCTATAATAAATGTATGTCATTAAGAAAATTAATATTAT
ATGAAAATAGGCCAGTATTTCCAAAGGTGTGGTACGCGTTCCCGAAGTCA
TATCCAAGGGGTTTACAAGGGGTACGCAAACACTTTTAAAAATTGCGTGT
TTTTGTGTGTGCCATCACACTGGAGATTATTAAAAAAATATTAGTATAGT
TTTTTATTAGTCTATCCTAGAAATTTTCTATTTAAGGGTATGAATTGGTA
AATAAATATTAGAAAAGGGTACGCATTGGTCAAAAGTTTGTGAAACACAA
AAGTTGAGGAAAGAATTTTTTTATTTAAATTTCAATTTAATCAGTTACTA
ACACACCTCTGAGTCAATGACTGACAAAATGAAATTCTAAACAACACTAA
CTTTGAGATAGATGTTTTTTTAATAAGTATTTACTTTGTATTGTTTCACA
TGCTGTAAATAAACTTTTTCTCATCTTTGCCTTTCTTTTTATGTGATTCA
TCACAACTCTTAGTATCAAAAACAGCCATAGAAATCTATCGCGAAACATT
GGTTAAATTTGTGATCGACTTCATTAAACGCCTTTATGATTAGTTTACTA
ACTACCACTTGTGTACCTATGGTAACTAAAATGTTGGTAATGCACAGTGG
TTGAACATCAATGAGCAGATGAGCTCCATTTCTAGAAATGCTTCATTATA
TTTTCACTTTCTGGTTTATGGCTTCTAATCGGTCTTGCTTCTCTTCACCA
TCTTGTCTTTGTAACTGGAATTATCAATATTTCATGAACTTTAGTCTTAT
AGTTCTCTTTGTTTGATAAAAATAAATGTAACCTTCGAAATTTAAGCAGA
AATCTGTTCTTATTTTCCACTTTAATAAATTGTTTAAGACAATATTCCAA
AAATTTTCTCAACGTTCTGTCCTAAATATTTGCATCACAACCTTCTACAT
TTTTTAGTATAGTTTTTCCAGTGTTTTATGGAAGTTATCGACTCACATTC
ATTTATTAGGACATTACTTTATATTCATAATTATTCCTTTATTATCAGAA
AAAGTTCACCTTTTCTTTAACAGATTTTAACCTACTTAAGCCACTATTCG
GTTTCCACGTCAATCCATTAGGTTTTAGTGAAAACATCGACATGTGTCAA
TGATCGAAAAATTACCTCGAAAAAACGCCGCCAAATACGGGCCAGAATCA
TAAACAAGACCTGGTTTGAGGAATTTATTTTGTAATTTATATACTTTGAT
TTGAATCTTTTGGAATTATATTTTGTCAATTGTTTGTCGACCAAGACATC
AAGTTGCTATGATTTGAATGGGCCAAAAAGATAGTTATGTTTAAAACGAG
GCTCAATGTGATTGAGAAATCTTAACTTTGAATTACACTATTGAAAATGG
TTATGAGGCAAATCGTGATTACAGCGAAAATATATTTTATTACTCAATGT
ACAATGAGCTTAAAGCACTACCAGAAAAACAACGAGTTTGGACAAATGAA
GCGTTATTGAATCTCAAGATAAAACGTGAAGAGATAATTCAAATGATGTT
TGAAACAACGAATTCATTACCTATGTATGTGACCATGCAAACAATTATGT
CTTTGTATGCGCCTGGGTGTGCAACGGGTATCGTTTTTGAGTCTGGAGAT
AGAGTTTTTAATACTGCTCCAATTTATGAAGATTATGTGTTGCTTCATAC
AATTTATAGAATGAATTTGGCTGCAAAAGATTTTACAGATTATTTGATCA
AAATCCTAACAGAACGAGGTTGCAGATTTACAATTACATCCCAATTACAT
GAAGCAAAATACCCTAGAATTAAACAAACGTAATTTTTACCAATAAAAGC
GAAATATTTTACTCTGCTTTTCATGAAATAGCATTTACAGACAATGAATA
TTGGTAAGTTTATGCAATCATTCAAAGCTACTATATTGCTGAATTACTGA
GGATATATTTTGATACATAAATGTATTTTGAAGTTTTTGAACAAAGAAAT
TTGATCCATCAAATTGTAGTATGACTCACCATTTATCGAATCAATGAGCC
ATCTGATTAGTCTAAGAACTGAAATATTACTACTAATTCCTAAATTCCTT
TAAAGTTTTAAATTATAAATTAAAAATGTTTTAAAAAGTACTCTGTTAAT
TGTTTTATTTTATCAAGGTTTCCCGCACGTTTATTACAAAACAATTAATA
ATTCTGCTGGTTTTTGCTCAAATATACCGAATGTGTTTAAGTGTGAAGTT
GAATGTAAGATGAACGGAGTCTTTGTCACGCTAGGATCTTCTATTGCACC
GTCTAGTTTGCCGGAAGAATATCAAGCACTTTATGTTAATATAAGATTTG
TAAAAAGATTAATAACATTTAACTATATATACTTAACTGAAAATATTACT
TGTTTATGCAATGGATCCTTTCATATTACGCCATATAAACAATTTACAGT
GAGCAGGTTCCTATTAGTTAAGAAAGATTTTGTAAATCCAACTATTGAAC
ACAACTATAACAACATAACAAAAGTTTATAATTTGAAATGTAATTTTCCG
CACCCGAGGGGCAATTTACATTTCTATATTGAGTGCAATGGACAAATTGG
ATTTGTAAATGAATGGCTTATAGGAGAAAACGTACTCAAATTGAATTACG
GTGATCTTGGCAAGTCAATTATGTGTTTTTGTGATATGCGATTTCCATAT
TTTACTGTTCTTACCAAAAGTCTGAAAATATTGTTCCATTTACCACCAAA
CGAAGTTTTCATTATACCTAGTAGAACGAATATTAACGATACACTTGTTT
GTGACTACAAATTCGGAGAAAACCGTTCAAGTGGAAATTTTTTGACAAAT
TTTGGGAAATATCTGTTTCAAAATTTATTTGTTGATTCAAACAATAATTT
AAAACTAAGTTATGAACTTCTTATCATCAATATTACATGTTATTGTGAGG
TTACTTTTCACTCGGTGCATTTTCTAAAACTTAAGAAATATTTTTTATTA
CCGAAAACAGTTTAGAGTTTCTACAATTCGAGTTTAATACTTTCAATTTA
TTATCAAAATCTAAAGAAATTCCTAAGCCAGGCTGTAAAGCTTTATACTG
GGCATTAGAATGGAAGAATACCAGTCAGATTATATCAACTGGACAATGGG
CTATTATGACTCATATATTCGATATGTCCTTTTTTCCTAAAGGTAATTGG
AACCAAGCTCATCCTTATCGCTAATTAATAATTATCATATCAAATTGAAA
GAAATAGATTTGAATCTGTATTTTATGTACGGCCATTTAAAGACAAAATG
TTTCACTAATAAATTCTACTACAAACTTTACAACATAACTGTTGATCAAG
ACTTTTATCGGCATTATATGAAAAAATATCGAATTATACGAAAATTTTCT
TCTTTTGTGACATCAACAAATCCATTAGTTTCTGATATGAATGCTTCTCT
CATTAAAGAAAAACAATTTCGCAGATTTGAATTAAATGAAGAAACTTTCT
TTGGTAACCGGAGGAAATTGAGATTTCACAGCACGAGAAAACAGCGTGTA
TTATCTATAGACTCCGGTAGCGTAGAAATAATGATGGACAAAATTGAAGA
TAGAAGAAAATTAACTATTGGTAAAATGGATAAAAGTTTGCAACCTCAAA
AGCAAATGCCATACGATATGTACAGTATAGCCTCTATGGATTCACTGATC
TATATGCCTCCG

protein sequence of SMED30004773-orf-1

>SMED30004773-orf-1 ID=SMED30004773-orf-1|Name=SMED30004773-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=146bp
MYGHLKTKCFTNKFYYKLYNITVDQDFYRHYMKKYRIIRKFSSFVTSTNP
LVSDMNASLIKEKQFRRFELNEETFFGNRRKLRFHSTRKQRVLSIDSGSV
EIMMDKIEDRRKLTIGKMDKSLQPQKQMPYDMYSIASMDSLIYMPP

protein sequence of SMED30004773-orf-2

>SMED30004773-orf-2 ID=SMED30004773-orf-2|Name=SMED30004773-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=148bp
MKYLQSLCQRNKQYCIIFYILLLTMETKCYMTINFANVSIGNTAECILYH
DTPVVYNITLKAELNGHEILLPSKGFPYLSDFDNKYVLPNLIAFNTRFLK
IQIEFIPYKLPLICVILEKYYFVTKYIHSTGLMALFVMQIIEFLINS*

protein sequence of SMED30004773-orf-3

>SMED30004773-orf-3 ID=SMED30004773-orf-3|Name=SMED30004773-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=252bp
MNGVFVTLGSSIAPSSLPEEYQALYVNIRFVKRLITFNYIYLTENITCLC
NGSFHITPYKQFTVSRFLLVKKDFVNPTIEHNYNNITKVYNLKCNFPHPR
GNLHFYIECNGQIGFVNEWLIGENVLKLNYGDLGKSIMCFCDMRFPYFTV
LTKSLKILFHLPPNEVFIIPSRTNINDTLVCDYKFGENRSSGNFLTNFGK
YLFQNLFVDSNNNLKLSYELLIINITCYCEVTFHSVHFLKLKKYFLLPKT
V*

protein sequence of SMED30004773-orf-4

>SMED30004773-orf-4 ID=SMED30004773-orf-4|Name=SMED30004773-orf-4|organism=Schmidtea mediterranea sexual|type=polypeptide|length=129bp
MYNELKALPEKQRVWTNEALLNLKIKREEIIQMMFETTNSLPMYVTMQTI
MSLYAPGCATGIVFESGDRVFNTAPIYEDYVLLHTIYRMNLAAKDFTDYL
IKILTERGCRFTITSQLHEAKYPRIKQT*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000043	dorsal ventral margin of the whole animal
PLANA:0000070	intestinal phagocyte

Vocabulary: **INTERPRO**
Term	Definition
IPR004000	Actin

Vocabulary: **molecular function**
Term	Definition
GO:0000166	nucleotide binding
GO:0005524	ATP binding

Vocabulary: **cellular component**
Term	Definition
GO:0005737	cytoplasm
GO:0005856	cytoskeleton

Main menu

Actin

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Owlery

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