Matrix metallopeptidase 9

Overview
NameMatrix metallopeptidase 9
Smed IDSMED30004716
Length (bp)1281
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Matrix metallopeptidase 9 (SMED30004716) t-SNE clustered cells

Violin plots show distribution of expression levels for Matrix metallopeptidase 9 (SMED30004716) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Matrix metallopeptidase 9 (SMED30004716) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Matrix metallopeptidase 9 (SMED30004716) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30004716

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30004716h1SMcG0022619 SmedASXL_008979SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30004716h1SMcG0022619 dd_Smed_v4_12601_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30004716h1SMcG0022619 dd_Smed_v6_12601_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
head regionSMED30004716h1SMcG0022619 OX_Smed_1.0.07353ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
reproductive organSMED30004716h1SMcG0022619 Contig32028uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30004716h1SMcG0022619 Contig32028newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Match: MMP2 (matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166])

HSP 1 Score: 86.6557 bits (213), Expect = 1.333e-17
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K  N C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  157 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATTANYDDDRKWGFC 314

HSP 2 Score: 52.373 bits (124), Expect = 1.357e-6
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    + C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT++YD+D  R+W  C +    L
Sbjct:  215 CKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKM--WCATTANYDDD--RKWGFCPDQGYSL 321
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Match: MMP2 (matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166])

HSP 1 Score: 86.6557 bits (213), Expect = 1.333e-17
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K  N C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  157 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATTANYDDDRKWGFC 314

HSP 2 Score: 52.373 bits (124), Expect = 1.357e-6
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    + C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT++YD+D  R+W  C +    L
Sbjct:  215 CKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKM--WCATTANYDDD--RKWGFCPDQGYSL 321
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Match: MMP2 (matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166])

HSP 1 Score: 86.6557 bits (213), Expect = 1.378e-17
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K  N C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  183 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATTANYDDDRKWGFC 340

HSP 2 Score: 52.373 bits (124), Expect = 1.361e-6
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    + C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT++YD+D  R+W  C +    L
Sbjct:  241 CKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKM--WCATTANYDDD--RKWGFCPDQGYSL 347
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Match: MMP2 (matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166])

HSP 1 Score: 86.6557 bits (213), Expect = 1.554e-17
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K  N C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  233 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATTANYDDDRKWGFC 390

HSP 2 Score: 51.9878 bits (123), Expect = 1.689e-6
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    + C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT++YD+D  R+W  C +    L
Sbjct:  291 CKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKM--WCATTANYDDD--RKWGFCPDQGYSL 397
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Match: MMP9 (matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176])

HSP 1 Score: 81.6481 bits (200), Expect = 6.765e-16
Identity = 64/219 (29.22%), Postives = 85/219 (38.81%), Query Frame = 3 
Query:  357 VCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
             C FP I+  +  + C       G  WC    N+D  ++   CP+  L T  G+  G+ C+ PF+++ + Y AC        Y+   WCATT++YD DK                                  LF     C T            T   GNS G+ C FPF F   EY +C S  R D             LWCATT N++ DKKW  C
Sbjct:  229 ACHFPFIFEGRSYSACTTDGRSDGLPWCSTTANYDTDDRFGFCPSERLYTQDGNADGKPCQFPFIFQGQSYSACTTDGRSDGYR---WCATTANYDRDK----------------------------------LF---GFCPTRADS--------TVMGGNSAGELCVFPFTFLGKEYSTCTSEGRGDG-----------RLWCATTSNFDSDKKWGFC 388

HSP 2 Score: 56.225 bits (134), Expect = 6.942e-8
Identity = 37/113 (32.74%), Postives = 49/113 (43.36%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPN--TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP I++ +  + C       GY WC    N+D       CP    S    G+  G LC  PF +  K Y  C     E       WCATTS++D+DKK  W  C +    L
Sbjct:  288 CQFPFIFQGQSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGKEYSTC---TSEGRGDGRLWCATTSNFDSDKK--WGFCPDQGYSL 395
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Zebrafish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-16
Identity = 61/182 (33.52%), Postives = 79/182 (43.41%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKK------RRWTRCNENSSQLPCYFSNVTDSYA-TGINSECRLFYNKWVCNTER----KEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T  G+  G +C  PF+++   Y  C     E       WC+TT+DYD DKK            + NS++ PC F  + D        +E R    +W   T      K+   CP  +T    GNS G+ CHFPF F  + Y SC S  R D             LWC TT NY+ DKKW  C
Sbjct:  221 TRYGNAEGAMCHFPFLFEGTSYSTCTT---EGRTDGLPWCSTTADYDKDKKFGFCPSELLFTFDGNSNEAPCVFPFIFDGKKYDSCTTEGRNDGYRWCSTTANFDTDKKYGFCPNRDTAVIGGNSEGEPCHFPFTFLGNTYSSCTSEGRNDG-----------KLWCGTTSNYDTDKKWGFC 388

HSP 2 Score: 54.299 bits (129), Expect = 1.985e-7
Identity = 40/124 (32.26%), Postives = 49/124 (39.52%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQCQLSPA--GYWWCPKDDNFDLHNQKTVCPN-TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP I+  K  + C       GY WC    NFD   +   CPN  +    G+  G  C  PF +    Y +C     E       WC TTS+YD DKK  W  C +    L
Sbjct:  277 LFTFDGNSNEAPCVFPFIFDGKKYDSCTTEGRNDGYRWCSTTANFDTDKKYGFCPNRDTAVIGGNSEGEPCHFPFTFLGNTYSSCTS---EGRNDGKLWCGTTSNYDTDKK--WGFCPDRGYSL 395
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Zebrafish
Match: mmp2 (matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123])

HSP 1 Score: 79.337 bits (194), Expect = 2.066e-15
Identity = 63/221 (28.51%), Postives = 85/221 (38.46%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            + C+FP ++  K  N C  Q    G+ WC    NFD   +   CP+  L T  G+  G  CK PF ++   Y +C  S  +  Y+   WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F    Y SC ++ R D             +WCA T +++ D+KW  C
Sbjct:  231 EFCKFPFLFMGKEYNSCTSQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQGDKYDSCTTSGRDDGYR---WCATTEDYDKDKTYGF-----------------------------------------------CPETAMSTSGGNSDGAPCVFPFKFLGDSYDSCTTSGRNDG-----------KMWCAVTKSFDDDRKWGFC 390
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Zebrafish
Match: sel1l (SEL1L adaptor subunit of ERAD E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-041001-122])

HSP 1 Score: 52.7582 bits (125), Expect = 6.030e-7
Identity = 29/75 (38.67%), Postives = 36/75 (48.00%), Query Frame = 3 
Query:  792 RECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEE 1016
            +E P       G + G+ C FPFLF   EY  C +  R D             LWCATT +YN DK+W  C +EE
Sbjct:   95 KEVP---VVNGGTASGEPCIFPFLFQGKEYSDCTTEGRGDG-----------RLWCATTYDYNNDKRWGFCETEE 155
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Match: pax6 (paired box 6 [Source:Xenbase;Acc:XB-GENE-484088])

HSP 1 Score: 85.8853 bits (211), Expect = 2.580e-17
Identity = 83/295 (28.14%), Postives = 114/295 (38.64%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPA-TPTAPP 1223
            + C+FP ++ DK  N C  S    G+ WC    +FD   +   CP+  L T AG+  G+ CK PF ++   + +C     E     Y WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F  ++Y SC S+ R+D             LWCA++ NY+ D+KW  C  +   L +          + L        L A +Y F +  R ++ DI G Q  Y   S     P   PT  P
Sbjct:  218 EFCKFPFMFNDKEYNSCTDSGRSDGFLWCSTTYDFDKDGKYGFCPHELLFTLAGNAEGKPCKFPFKFQGSTFDSCTT---EGRTDGYRWCATTEDYDKDKLYGF-----------------------------------------------CPETALSTVGGNSEGSPCVFPFTFLGNKYDSCTSSGRSDG-----------KLWCASSSNYDDDRKWGFCPDQGYSL-FLVAAHEFGHALGLEHSQDPGALMAPIYTFIKNFRLSQDDITGIQELYGQGSKEKPRPGPVPTMGP 450
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Match: pax6 (paired box 6 [Source:Xenbase;Acc:XB-GENE-484088])

HSP 1 Score: 85.5001 bits (210), Expect = 3.001e-17
Identity = 83/295 (28.14%), Postives = 114/295 (38.64%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPA-TPTAPP 1223
            + C+FP ++ DK  N C  S    G+ WC    +FD   +   CP+  L T AG+  G+ CK PF ++   + +C     E     Y WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F  ++Y SC S+ R+D             LWCA++ NY+ D+KW  C  +   L +          + L        L A +Y F +  R ++ DI G Q  Y   S     P   PT  P
Sbjct:  226 EFCKFPFMFNDKEYNSCTDSGRSDGFLWCSTTYDFDKDGKYGFCPHELLFTLAGNAEGKPCKFPFKFQGSTFDSCTT---EGRTDGYRWCATTEDYDKDKLYGF-----------------------------------------------CPETALSTVGGNSEGSPCVFPFTFLGNKYDSCTSSGRSDG-----------KLWCASSSNYDDDRKWGFCPDQGYSL-FLVAAHEFGHALGLEHSQDPGALMAPIYTFIKNFRLSQDDITGIQELYGQGSKEKPRPGPVPTMGP 458
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Match: pax6 (paired box 6 [Source:Xenbase;Acc:XB-GENE-484088])

HSP 1 Score: 85.5001 bits (210), Expect = 3.362e-17
Identity = 83/295 (28.14%), Postives = 114/295 (38.64%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPA-TPTAPP 1223
            + C+FP ++ DK  N C  S    G+ WC    +FD   +   CP+  L T AG+  G+ CK PF ++   + +C     E     Y WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F  ++Y SC S+ R+D             LWCA++ NY+ D+KW  C  +   L +          + L        L A +Y F +  R ++ DI G Q  Y   S     P   PT  P
Sbjct:  221 EFCKFPFMFNDKEYNSCTDSGRSDGFLWCSTTYDFDKDGKYGFCPHELLFTLAGNAEGKPCKFPFKFQGSTFDSCTT---EGRTDGYRWCATTEDYDKDKLYGF-----------------------------------------------CPETALSTVGGNSEGSPCVFPFTFLGNKYDSCTSSGRSDG-----------KLWCASSSNYDDDRKWGFCPDQGYSL-FLVAAHEFGHALGLEHSQDPGALMAPIYTFIKNFRLSQDDITGIQELYGQGSKEKPRPGPVPTMGP 453
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Match: pax6 (paired box 6 [Source:Xenbase;Acc:XB-GENE-484088])

HSP 1 Score: 85.1149 bits (209), Expect = 4.136e-17
Identity = 83/295 (28.14%), Postives = 114/295 (38.64%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPA-TPTAPP 1223
            + C+FP ++ DK  N C  S    G+ WC    +FD   +   CP+  L T AG+  G+ CK PF ++   + +C     E     Y WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F  ++Y SC S+ R+D             LWCA++ NY+ D+KW  C  +   L +          + L        L A +Y F +  R ++ DI G Q  Y   S     P   PT  P
Sbjct:  214 EFCKFPFMFNDKEYNSCTDSGRSDGFLWCSTTYDFDKDGKYGFCPHELLFTLAGNAEGKPCKFPFKFQGSTFDSCTT---EGRTDGYRWCATTEDYDKDKLYGF-----------------------------------------------CPETALSTVGGNSEGSPCVFPFTFLGNKYDSCTSSGRSDG-----------KLWCASSSNYDDDRKWGFCPDQGYSL-FLVAAHEFGHALGLEHSQDPGALMAPIYTFIKNFRLSQDDITGIQELYGQGSKEKPRPGPVPTMGP 446
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Match: pax6 (paired box 6 [Source:Xenbase;Acc:XB-GENE-484088])

HSP 1 Score: 85.1149 bits (209), Expect = 4.147e-17
Identity = 83/295 (28.14%), Postives = 114/295 (38.64%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPA-TPTAPP 1223
            + C+FP ++ DK  N C  S    G+ WC    +FD   +   CP+  L T AG+  G+ CK PF ++   + +C     E     Y WCATT DYD DK   +                                               CP T  +T  GNS G  C FPF F  ++Y SC S+ R+D             LWCA++ NY+ D+KW  C  +   L +          + L        L A +Y F +  R ++ DI G Q  Y   S     P   PT  P
Sbjct:  256 EFCKFPFMFNDKEYNSCTDSGRSDGFLWCSTTYDFDKDGKYGFCPHELLFTLAGNAEGKPCKFPFKFQGSTFDSCTT---EGRTDGYRWCATTEDYDKDKLYGF-----------------------------------------------CPETALSTVGGNSEGSPCVFPFTFLGNKYDSCTSSGRSDG-----------KLWCASSSNYDDDRKWGFCPDQGYSL-FLVAAHEFGHALGLEHSQDPGALMAPIYTFIKNFRLSQDDITGIQELYGQGSKEKPRPGPVPTMGP 488
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Match: Mmp2 (matrix metallopeptidase 2 [Source:MGI Symbol;Acc:MGI:97009])

HSP 1 Score: 82.4185 bits (202), Expect = 2.594e-16
Identity = 64/219 (29.22%), Postives = 87/219 (39.73%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  +  + C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R D             +WCATT NY+ D+KW  C
Sbjct:  233 CKFPFLFNGREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYNSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRNDG-----------KVWCATTTNYDDDRKWGFC 390

HSP 2 Score: 54.299 bits (129), Expect = 2.353e-7
Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    N C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + KV  WCATT++YD+D  R+W  C +    L
Sbjct:  291 CKFPFRFQGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRNDGKV--WCATTTNYDDD--RKWGFCPDQGYSL 397
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Match: Mmp9 (matrix metallopeptidase 9 [Source:MGI Symbol;Acc:MGI:97011])

HSP 1 Score: 78.5666 bits (192), Expect = 3.936e-15
Identity = 82/264 (31.06%), Postives = 111/264 (42.05%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKK------RRWTRCNENSSQLPCYFSNVTDSYA-TGINSECRLFYNKWVCNT----ERKEIRECPR--TETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHS-ANVNHPAT------PTAPPS 1226
            T+ G+  G  C  PF ++ + Y AC  + D  N    W C+TT+DYD D K       R    + N    PC F  + +  + +   ++ R    +W   T    + K    CP     T   GNS G+ C FPF+F   +Y SC S  R D             LWCATT N++ DKKW  C  +   L +          + L    +   L   LY + EG   NK DI G Q  Y   S  +   PAT      PTAPP+
Sbjct:  220 TYYGNSNGAPCHFPFTFEGRSYSAC--TTDGRNDGTPW-CSTTADYDKDGKFGFCPSERLYTEHGNGEGKPCVFPFIFEGRSYSACTTKGRSDGYRWCATTANYDQDKLYGFCPTRVDATVVGGNSAGELCVFPFVFLGKQYSSCTSDGRRDG-----------RLWCATTSNFDTDKKWGFCPDQGYSL-FLVAAHEFGHALGLDHSSVPEALMYPLYSYLEGFPLNKDDIDGIQYLYGRGSKPDPRPPATTTTEPQPTAPPT 468

HSP 2 Score: 53.1434 bits (126), Expect = 4.700e-7
Identity = 36/113 (31.86%), Postives = 48/113 (42.48%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPN--TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C FP I+  +  + C       GY WC    N+D       CP    +    G+  G LC  PFV+  K Y +C     +       WCATTS++D DKK  W  C +    L
Sbjct:  288 CVFPFIFEGRSYSACTTKGRSDGYRWCATTANYDQDKLYGFCPTRVDATVVGGNSAGELCVFPFVFLGKQYSSC---TSDGRRDGRLWCATTSNFDTDKK--WGFCPDQGYSL 395
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Match: Fn1 (fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566])

HSP 1 Score: 61.2326 bits (147), Expect = 2.117e-9
Identity = 44/170 (25.88%), Postives = 66/170 (38.82%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T+ G+  G  C +PF Y  + +Y+C     E     + WC+TTS+Y+ D+K  ++ C +++  +                                           T  GNS G  CHFPFL+    Y  C S  R D +            WC TT NY+ D+K+  C
Sbjct:  350 TYGGNSNGEPCVLPFTYNGRTFYSCT---TEGRQDGHLWCSTTSNYEQDQK--YSFCTDHAVLV------------------------------------------QTRGGNSNGALCHFPFLYNNRNYTDCTSEGRRDNMK-----------WCGTTQNYDADQKFGFC 461
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Match: Fn1 (fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566])

HSP 1 Score: 60.8474 bits (146), Expect = 2.144e-9
Identity = 44/170 (25.88%), Postives = 66/170 (38.82%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T+ G+  G  C +PF Y  + +Y+C     E     + WC+TTS+Y+ D+K  ++ C +++  +                                           T  GNS G  CHFPFL+    Y  C S  R D +            WC TT NY+ D+K+  C
Sbjct:  350 TYGGNSNGEPCVLPFTYNGRTFYSCT---TEGRQDGHLWCSTTSNYEQDQK--YSFCTDHAVLV------------------------------------------QTRGGNSNGALCHFPFLYNNRNYTDCTSEGRRDNMK-----------WCGTTQNYDADQKFGFC 461
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Match: Fn1 (fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566])

HSP 1 Score: 61.2326 bits (147), Expect = 2.144e-9
Identity = 44/170 (25.88%), Postives = 66/170 (38.82%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T+ G+  G  C +PF Y  + +Y+C     E     + WC+TTS+Y+ D+K  ++ C +++  +                                           T  GNS G  CHFPFL+    Y  C S  R D +            WC TT NY+ D+K+  C
Sbjct:  350 TYGGNSNGEPCVLPFTYNGRTFYSCT---TEGRQDGHLWCSTTSNYEQDQK--YSFCTDHAVLV------------------------------------------QTRGGNSNGALCHFPFLYNNRNYTDCTSEGRRDNMK-----------WCGTTQNYDADQKFGFC 461
[Close]
BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Match: sp|P08253|MMP2_HUMAN (72 kDa type IV collagenase OS=Homo sapiens OX=9606 GN=MMP2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.462e-17
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K  N C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  233 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATTANYDDDRKWGFC 390

HSP 2 Score: 51.9878 bits (123), Expect = 8.111e-6
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    + C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT++YD+D  R+W  C +    L
Sbjct:  291 CKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKM--WCATTANYDDD--RKWGFCPDQGYSL 397
[Close]
BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Match: sp|Q90611|MMP2_CHICK (72 kDa type IV collagenase OS=Gallus gallus OX=9031 GN=MMP2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.711e-16
Identity = 66/219 (30.14%), Postives = 87/219 (39.73%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSPA--GYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP  +  K  N C  +    G+ WC    +FD   +   CP+ SL T  G+  G+ CK PF ++ + Y  C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF+F  ++Y SC SA R D             LWCA+T +Y+ D+KW  C
Sbjct:  230 CKFPFWFNGKEYNSCTDAGRNDGFLWCSTTKDFDADGKYGFCPHESLFTMGGNGDGQPCKFPFKFQGQSYDQCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFIFLGNKYDSCTSAGRNDG-----------KLWCASTSSYDDDRKWGFC 387

HSP 2 Score: 54.299 bits (129), Expect = 1.647e-6
Identity = 35/112 (31.25%), Postives = 57/112 (50.89%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++ +  +QC  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF++    Y +C  S    + K+  WCA+TS YD+D  R+W  C +    L
Sbjct:  288 CKFPFKFQGQSYDQCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFIFLGNKYDSCT-SAGRNDGKL--WCASTSSYDDD--RKWGFCPDQGYSL 394
[Close]
BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Match: sp|P33436|MMP2_RAT (72 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 8.316e-16
Identity = 64/219 (29.22%), Postives = 88/219 (40.18%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  +  + C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCATT NY+ D+KW  C
Sbjct:  233 CKFPFLFNGREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNGDGQPCKFPFRFQGTSYNSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KVWCATTTNYDDDRKWGFC 390

HSP 2 Score: 54.6842 bits (130), Expect = 1.161e-6
Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    N C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + KV  WCATT++YD+D  R+W  C +    L
Sbjct:  291 CKFPFRFQGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRSDGKV--WCATTTNYDDD--RKWGFCPDQGYSL 397
[Close]
BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Match: sp|P50757|MMP2_RABIT (72 kDa type IV collagenase OS=Oryctolagus cuniculus OX=9986 GN=MMP2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.620e-16
Identity = 64/219 (29.22%), Postives = 87/219 (39.73%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  K    C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R+D             +WCAT+ NY+ D+KW  C
Sbjct:  233 CKFPFLFNGKEYTSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYSSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTIGGNSEGAPCVFPFTFLGNKYESCTSAGRSDG-----------KMWCATSTNYDDDRKWGFC 390
[Close]
BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Match: sp|P33434|MMP2_MOUSE (72 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.814e-15
Identity = 64/219 (29.22%), Postives = 87/219 (39.73%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            C+FP ++  +  + C  +    G+ WC    NF+   +   CP+ +L T  G+  G+ CK PF ++   Y +C     E     Y WC TT DYD DKK  +                                               CP T  +T  GNS G  C FPF F  ++Y SC SA R D             +WCATT NY+ D+KW  C
Sbjct:  233 CKFPFLFNGREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYNSCTT---EGRTDGYRWCGTTEDYDRDKKYGF-----------------------------------------------CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRNDG-----------KVWCATTTNYDDDRKWGFC 390

HSP 2 Score: 54.299 bits (129), Expect = 1.646e-6
Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++    N C  +    GY WC   +++D   +   CP T++ T  G+  G  C  PF +    Y +C  S    + KV  WCATT++YD+D  R+W  C +    L
Sbjct:  291 CKFPFRFQGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCT-SAGRNDGKV--WCATTTNYDDD--RKWGFCPDQGYSL 397
[Close]
BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Match: A0A2H1CT90 (Epididymal sperm-binding protein 1 OS=Fasciola hepatica OX=6192 GN=D915_001199 PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 5.798e-39
Identity = 104/301 (34.55%), Postives = 142/301 (47.18%), Query Frame = 3 
Query:  276 FLLSLALLDHGKLFCKLIPFSFRSPVDVCEFPSIYRDKLINQCQLSPAGY-----------WWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNY-------------KVYWWCATTSDYDNDKKRRWTRCNEN-SSQLPCYF---SNVTDSYATGINSECRLFYNKWVCNTERKEIRECP---------RTETTYAGNSPGDKCHFPF------------LFGQSEYRSCISAKRTDTIHYRDASQFEPYL--WCATTPNYNIDKKWTKCVSEESVL 1025
            FL  +   D G+   +    S  S    C FPS++R   I +C  S               WWCP  DNFD + +   CP T+ T+AG+ PG+ C  PF+YKK+ Y  CIR+ DE+ Y               YWWC+TT+D+D D  R+WTRC    + QLPC+F   S  T    +GI  EC+ F   W+C TE  +IRECP          +  T  GNSPG  CHFPF              G +  R+  +              + P++  WCATT N++ D+ WT+C  E + L
Sbjct:   14 FLCPIGCWDRGQTSIR----SDLSREKACVFPSVHRRAAIYECVHSSLSVPNDNFHSKKPIWWCPLTDNFDHYPEWIPCPETASTYAGNQPGQECHFPFLYKKQVYSTCIRNGDELVYGQSEDPVPVDTGQSGYWWCSTTADFDRD--RKWTRCRPQLAQQLPCHFPKHSKWTGGMISGIAYECQAFSGHWICMTELGQIRECPGNRNSINTITSPNTEGGNSPGSPCHFPFQATLLLLTKQLTWTGPARKRNFTTCLPGTPNSPLSGVVYPPWIGYWCATTENFDRDRLWTRCSVELTQL 308
[Close]
BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Match: A0A504Z180 (Matrix metallopeptidase-9 (M10 family) OS=Fasciola gigantica OX=46835 GN=FGIG_12171 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.003e-38
Identity = 96/270 (35.56%), Postives = 131/270 (48.52%), Query Frame = 3 
Query:  357 VCEFPSIYRDKLINQCQLSPAGY-----------WWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKV-------------YWWCATTSDYDNDKKRRWTRCNEN-SSQLPCYF---SNVTDSYATGINSECRLFYNKWVCNTERKEIRECP---------RTETTYAGNSPGDKCHFPF------------LFGQSEYRSCISAKRTDTIHYRDASQFEPYL--WCATTPNYNIDKKWTKCVSE 1013
             C FPS++R   I +C  S               WWCP  DNFD + +   CP T+ T+AG+ PG+ C  PF+YKK+ Y  CIR+ DE+ Y               YWWC+TT+D+D D  R+WTRC    + QLPC+F   S  T    +GI  EC+ F   W+C TE  ++RECP          +  T  GNSPG  CHFPF              G +  R+  +              + P++  WCATT N++ D+ WT+C  E
Sbjct:   37 ACVFPSVHRRAAIYECVHSSLSVPNDNFHSKKPIWWCPLTDNFDHYPEWIPCPETASTYAGNQPGQECHFPFLYKKQVYSTCIRNGDELVYSQSEDPVPVDTGLSGYWWCSTTADFDRD--RKWTRCRPQLAQQLPCHFPKHSTWTGGMISGIAYECQAFSGHWICMTELGQLRECPGNRNSKYTITSPNTEGGNSPGSPCHFPFQATLLLLTKQLTWTGPARKRNFTTCLPGTPNSPLSGVVYPPWIGYWCATTENFDRDRLWTRCSVE 304
[Close]
BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Match: H2KSV5 (Epididymal sperm-binding protein 1 OS=Clonorchis sinensis OX=79923 GN=CLF_110454 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.285e-38
Identity = 99/310 (31.94%), Postives = 148/310 (47.74%), Query Frame = 3 
Query:  267 FRIFLLSLALLDHGKLFCKLIPFSFRSPVDV----CEFPSIYRDKLINQCQ------------LSP----AGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKV-------------YWWCATTSDYDNDKKRRWTRC-NENSSQLPCYFSNVT---DSYATGINSECRLFYNKWVCNTERKEIRECPRTET-------TYAGNSPGDKCHFPFL------------FGQSEYRSCISAKRTDTIHYRDASQFEPYL--WCATTPNYNIDKKWTKCVSEESV 1022
             ++ ++ LALL          P  +R   +     C FP+++R   + +CQ            L+P     G WWC   DNFD + +  VCP T  T+ G+ PGR C  PF+++K+ Y+ CIR   E+ ++              YWWCATT ++D D  R WTRC ++++ QLPC+F   T         ++ EC+ F   WVC+TE  ++RECPR +        T  GN PG +CHFPF              G +  R+  +     T      S + P++  WCATT N++ DK WT+C   +  
Sbjct:    1 MQLDVIFLALLTSVGYTLAWRPREYRGSSEAGEKPCIFPTVHRRTAMYECQNSLVSVPIEPFQLAPNQQSRGIWWCSLTDNFDHYPEWRVCPETPTTYGGNQPGRDCHFPFIHQKRIYHTCIREGGELRFQQSDDPVPVDDGRSGYWWCATTPNFDRD--RFWTRCRSQHAHQLPCHFPKQTVQVGGLVQDMDHECQPFAGHWVCHTELNQLRECPRAQLGGSLSSFTEGGNDPGFQCHFPFQATLPLLTPDVHWVGTARRRNITTCLPGVTTSNGLESIYPPWIGYWCATTSNFDEDKLWTRCTHPQEA 308
[Close]
BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Match: A0A075A8C5 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_01905 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.128e-36
Identity = 91/273 (33.33%), Postives = 136/273 (49.82%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQ------------LSP----AGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYK-------------VYWWCATTSDYDNDKKRRWTRC-NENSSQLPCYFSNVT---DSYATGINSECRLFYNKWVCNTERKEIREC-------PRTETTYAGNSPGDKCHFPFL------------FGQSEYRSCISAKRTDTIHYRDASQFEPYL--WCATTPNYNIDKKWTKCVSEE 1016
            C FP+++R   + +CQ            L+P     G WWC   DNFD + +  +CP T  T+ G+ PGR C  PF+++K+ Y+ CIR   E+ ++              YWWCATT ++D D  R WTRC ++++ QLPC+F+  T         ++ EC+ F   WVC+TE  ++REC       P +  T  GN PG +CHFPF              G +  R+  +     T      S + P++  WCATT N++ DK WT+C   +
Sbjct:   36 CIFPTVHRRTAMYECQNSLVSVPTEPFQLAPNQQNRGIWWCSLTDNFDHYPEWRICPETPTTYGGNQPGRDCHFPFIHQKRIYHTCIREGGELRFQRPDDPVPVDDGRSGYWWCATTPNFDKD--RFWTRCRSQHAHQLPCHFTKHTVKVGGLVQDVDHECQPFAGHWVCHTELNQLRECPSALVGGPSSSLTEGGNDPGFQCHFPFQATLPLLTADFHWVGTARRRNITTCLPGLTTSSGLESIYPPWIGYWCATTSNFDEDKLWTRCTHPQ 306

HSP 2 Score: 68.5514 bits (166), Expect = 1.306e-8
Identity = 51/190 (26.84%), Postives = 75/190 (39.47%), Query Frame = 3 
Query:  507 SDPG-RLCKIPFVYKKKFYYACIRSIDEVNYKVY-----------WWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCIS-------AKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEES 1019
            S+PG + C  P V+++   Y C  S+  V  + +           WWC+ T ++D+                                      Y +W         R CP T TTY GN PG  CHFPF+  +  Y +CI         +  D +   D      Y WCATTPN++ D+ WT+C S+ +
Sbjct:   29 SEPGQKPCIFPTVHRRTAMYECQNSLVSVPTEPFQLAPNQQNRGIWWCSLTDNFDH--------------------------------------YPEW---------RICPETPTTYGGNQPGRDCHFPFIHQKRIYHTCIREGGELRFQRPDDPVPVDDGRSG--YWWCATTPNFDKDRFWTRCRSQHA 169
[Close]
BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Match: A0A419QF60 (Epididymal sperm-binding protein 1 OS=Clonorchis sinensis OX=79923 GN=ELSPBP1 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.128e-36
Identity = 97/310 (31.29%), Postives = 145/310 (46.77%), Query Frame = 3 
Query:  267 FRIFLLSLALLDHGKLFCKLIPFSFRSPVDV----CEFPSIYRDKLINQCQLSPA----------------GYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKV-------------YWWCATTSDYDNDKKRRWTRC-NENSSQLPCYFSNVT---DSYATGINSECRLFYNKWVCNTERKEIRECPRTET-------TYAGNSPGDKCHFPFL------------FGQSEYRSCISAKRTDTIHYRDASQFEPYL--WCATTPNYNIDKKWTKCVSEESV 1022
             ++ ++ LALL          P  +R   +     C FP+++R   + +CQ S                  G WWC   DNFD + +  VCP T  T+ G+ PGR C  PF+++K+ Y+ CIR   E+ ++              YWWCATT ++D D  R WTRC ++++ QLPC+F   T         ++ EC+ F   WVC+TE  ++RECP  +        T  GN PG +CHFPF              G +  R+  +     T      S + P++  WCATT N++ DK WT+C   +  
Sbjct:    1 MQLDVIFLALLTSVGYTLAWRPKEYRGSSEAGEKPCIFPTVHRRTAMYECQNSLVSVPIEPFQSAPNQQSRGIWWCSLTDNFDHYPEWRVCPETPTTYGGNQPGRDCHFPFIHQKRIYHTCIREGGELRFQQPDDPIPVDDGRSGYWWCATTPNFDRD--RFWTRCRSQHAHQLPCHFPKHTVQVGGLVQDMDHECQPFAGHWVCHTELNQLRECPSAQLGGPLSSFTEGGNDPGFQCHFPFQATLPLLTPDVHWVGTARRRNITTCLPGVTTSNGLESIYPPWIGYWCATTSNFDEDKLWTRCTHPQEA 308
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 87.0409 bits (214), Expect = 6.012e-18
Identity = 64/183 (34.97%), Postives = 84/183 (45.90%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRW--------TRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTER----KEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T  G+  G LCK PF+++   Y  CI    E       WCATT++YDNDKK  +           N N ++    F+   ++Y  G  +E R    +W   T      K+   CP  +T    GNS G+ C FPF F  ++Y SC S  R D             LWCATT NY+ DKKW  C
Sbjct:  221 TRYGNGEGALCKFPFIFEGTSYSTCIT---EGRSDGLPWCATTANYDNDKKFGFCPSELLFTFDGNSNGAECVFPFTFQGETY-NGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTSEGRGDG-----------KLWCATTSNYDADKKWGFC 388

HSP 2 Score: 56.9954 bits (136), Expect = 2.623e-8
Identity = 40/124 (32.26%), Postives = 52/124 (41.94%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPN-TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP  ++ +  N C  +    GY WC    NFD   +   CPN  +    G+  G  C+ PF +    Y +C     E       WCATTS+YD DKK  W  C +    L
Sbjct:  277 LFTFDGNSNGAECVFPFTFQGETYNGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTS---EGRGDGKLWCATTSNYDADKK--WGFCPDKGYSL 395

HSP 3 Score: 51.6026 bits (122), Expect = 1.286e-6
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 3 
Query:  801 PRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            P  +T Y GN  G  C FPF+F  + Y +CI+  R+D +            WCATT NY+ DKK+  C SE
Sbjct:  217 PVVKTRY-GNGEGALCKFPFIFEGTSYSTCITEGRSDGLP-----------WCATTANYDNDKKFGFCPSE 275
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 87.0409 bits (214), Expect = 6.175e-18
Identity = 64/183 (34.97%), Postives = 84/183 (45.90%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRW--------TRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTER----KEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T  G+  G LCK PF+++   Y  CI    E       WCATT++YDNDKK  +           N N ++    F+   ++Y  G  +E R    +W   T      K+   CP  +T    GNS G+ C FPF F  ++Y SC S  R D             LWCATT NY+ DKKW  C
Sbjct:  221 TRYGNGEGALCKFPFIFEGTSYSTCIT---EGRSDGLPWCATTANYDNDKKFGFCPSELLFTFDGNSNGAECVFPFTFQGETY-NGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTSEGRGDG-----------KLWCATTSNYDADKKWGFC 388

HSP 2 Score: 56.9954 bits (136), Expect = 2.190e-8
Identity = 40/124 (32.26%), Postives = 52/124 (41.94%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPN-TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP  ++ +  N C  +    GY WC    NFD   +   CPN  +    G+  G  C+ PF +    Y +C     E       WCATTS+YD DKK  W  C +    L
Sbjct:  277 LFTFDGNSNGAECVFPFTFQGETYNGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTS---EGRGDGKLWCATTSNYDADKK--WGFCPDKGYSL 395

HSP 3 Score: 51.6026 bits (122), Expect = 1.153e-6
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 3 
Query:  801 PRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            P  +T Y GN  G  C FPF+F  + Y +CI+  R+D +            WCATT NY+ DKK+  C SE
Sbjct:  217 PVVKTRY-GNGEGALCKFPFIFEGTSYSTCITEGRSDGLP-----------WCATTANYDNDKKFGFCPSE 275
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 86.6557 bits (213), Expect = 7.715e-18
Identity = 64/183 (34.97%), Postives = 84/183 (45.90%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRW--------TRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTER----KEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T  G+  G LCK PF+++   Y  CI    E       WCATT++YDNDKK  +           N N ++    F+   ++Y  G  +E R    +W   T      K+   CP  +T    GNS G+ C FPF F  ++Y SC S  R D             LWCATT NY+ DKKW  C
Sbjct:  221 TRYGNGEGALCKFPFIFEGTSYSTCIT---EGRSDGLPWCATTANYDNDKKFGFCPSELLFTFDGNSNGAECVFPFTFQGETY-NGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTSEGRGDG-----------KLWCATTSNYDADKKWGFC 388

HSP 2 Score: 56.6102 bits (135), Expect = 2.863e-8
Identity = 40/124 (32.26%), Postives = 52/124 (41.94%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPN-TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP  ++ +  N C  +    GY WC    NFD   +   CPN  +    G+  G  C+ PF +    Y +C     E       WCATTS+YD DKK  W  C +    L
Sbjct:  277 LFTFDGNSNGAECVFPFTFQGETYNGCTTEGRSDGYRWCATTSNFDTDKKYGFCPNRDTAVIGGNSEGEPCQFPFTFLGTKYTSCTS---EGRGDGKLWCATTSNYDADKK--WGFCPDKGYSL 395

HSP 3 Score: 51.6026 bits (122), Expect = 1.330e-6
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 3 
Query:  801 PRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            P  +T Y GN  G  C FPF+F  + Y +CI+  R+D +            WCATT NY+ DKK+  C SE
Sbjct:  217 PVVKTRY-GNGEGALCKFPFIFEGTSYSTCITEGRSDGLP-----------WCATTANYDNDKKFGFCPSE 275
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 76.2554 bits (186), Expect = 1.511e-14
Identity = 61/197 (30.96%), Postives = 74/197 (37.56%), Query Frame = 3 
Query:  420 GYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYA-GNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            G  WC    N+D   +   CP+  L T  G+  G  C  PF ++ K Y +C     E     Y WCATTS+YD DKK  +                                               CP  +T    GNS G+ CHFPF F    Y SC S  R D             LWCATT N++ DKKW  C
Sbjct:  230 GLPWCATTANYDKDRKYGFCPSELLFTFDGNSNGAKCVFPFTFQGKTYDSCTT---EGRSDGYRWCATTSNYDTDKKYGF-----------------------------------------------CPNRDTAVVDGNSDGELCHFPFTFSGKTYTSCTSEGREDR-----------QLWCATTSNFDKDKKWGFC 365

HSP 2 Score: 59.3066 bits (142), Expect = 3.807e-9
Identity = 42/125 (33.60%), Postives = 56/125 (44.80%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPN--TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP  ++ K  + C  +    GY WC    N+D   +   CPN  T++    SD G LC  PF +  K Y +C     E       WCATTS++D DKK  W  C ++   L
Sbjct:  254 LFTFDGNSNGAKCVFPFTFQGKTYDSCTTEGRSDGYRWCATTSNYDTDKKYGFCPNRDTAVVDGNSD-GELCHFPFTFSGKTYTSCTS---EGREDRQLWCATTSNFDKDKK--WGFCPDSGYSL 372

HSP 3 Score: 51.9878 bits (123), Expect = 8.851e-7
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 3 
Query:  816 TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVL 1025
            T+ GNS G KC FPF F    Y SC +  R+D            Y WCATT NY+ DKK+  C + ++ +
Sbjct:  256 TFDGNSNGAKCVFPFTFQGKTYDSCTTEGRSDG-----------YRWCATTSNYDTDKKYGFCPNRDTAV 314
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Match: mmp9 (matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132])

HSP 1 Score: 76.2554 bits (186), Expect = 1.600e-14
Identity = 61/197 (30.96%), Postives = 74/197 (37.56%), Query Frame = 3 
Query:  420 GYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYA-GNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            G  WC    N+D   +   CP+  L T  G+  G  C  PF ++ K Y +C     E     Y WCATTS+YD DKK  +                                               CP  +T    GNS G+ CHFPF F    Y SC S  R D             LWCATT N++ DKKW  C
Sbjct:  240 GLPWCATTANYDKDRKYGFCPSELLFTFDGNSNGAKCVFPFTFQGKTYDSCTT---EGRSDGYRWCATTSNYDTDKKYGF-----------------------------------------------CPNRDTAVVDGNSDGELCHFPFTFSGKTYTSCTSEGREDR-----------QLWCATTSNFDKDKKWGFC 375

HSP 2 Score: 59.3066 bits (142), Expect = 4.000e-9
Identity = 42/125 (33.60%), Postives = 56/125 (44.80%), Query Frame = 3 
Query:  324 LIPFSFRSPVDVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPN--TSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            L  F   S    C FP  ++ K  + C  +    GY WC    N+D   +   CPN  T++    SD G LC  PF +  K Y +C     E       WCATTS++D DKK  W  C ++   L
Sbjct:  264 LFTFDGNSNGAKCVFPFTFQGKTYDSCTTEGRSDGYRWCATTSNYDTDKKYGFCPNRDTAVVDGNSD-GELCHFPFTFSGKTYTSCTS---EGREDRQLWCATTSNFDKDKK--WGFCPDSGYSL 382

HSP 3 Score: 51.9878 bits (123), Expect = 9.061e-7
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 3 
Query:  816 TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVL 1025
            T+ GNS G KC FPF F    Y SC +  R+D            Y WCATT NY+ DKK+  C + ++ +
Sbjct:  266 TFDGNSNGAKCVFPFTFQGKTYDSCTTEGRSDG-----------YRWCATTSNYDTDKKYGFCPNRDTAV 324
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Sea Lamprey
Match: mmp2 (matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123])

HSP 1 Score: 70.8626 bits (172), Expect = 1.510e-13
Identity = 59/219 (26.94%), Postives = 81/219 (36.99%), Query Frame = 3 
Query:  357 VCEFPSIYRDKLINQCQLSPA--GYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
             C FP ++       C       G  WC    +FD   +   CP+ SL T  G+  G+ CK PFV+  + Y +C  +  +  Y+   WC+TT DYD DK                Y    +D+ AT                                 GN+ G  C FPF+F    Y +C    R D              WCATT +++ DKKW  C
Sbjct:  165 TCHFPFLFEGVEYTGCTAKGRKDGMLWCSTTADFDTDAKYGFCPSESLMTFGGNGGGKPCKFPFVFLGETYDSCTATGRKDGYR---WCSTTEDYDRDK---------------LYGFCPSDAMATS-------------------------------GGNAEGAPCVFPFVFLDDSYDACTQNGRKDGKS-----------WCATTSSFDDDKKWGFC 323

HSP 2 Score: 50.8322 bits (120), Expect = 4.249e-7
Identity = 25/63 (39.68%), Postives = 33/63 (52.38%), Query Frame = 3 
Query:  825 GNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            GN+ G  CHFPFLF   EY  C +  R D +           LWC+TT +++ D K+  C SE
Sbjct:  159 GNAEGATCHFPFLFEGVEYTGCTAKGRKDGM-----------LWCSTTADFDTDAKYGFCPSE 210

HSP 3 Score: 48.9062 bits (115), Expect = 1.560e-6
Identity = 42/174 (24.14%), Postives = 60/174 (34.48%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECP-RTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            T  G+  G  C  PF+++   Y  C     +       WC+TT+D+D D K  +                                               CP  +  T+ GN  G  C FPF+F    Y SC +  R D            Y WC+TT +Y+ DK +  C S+
Sbjct:  156 TRFGNAEGATCHFPFLFEGVEYTGCTAKGRKDGM---LWCSTTADFDTDAKYGF-----------------------------------------------CPSESLMTFGGNGGGKPCKFPFVFLGETYDSCTATGRKDG-----------YRWCSTTEDYDRDKLYGFCPSD 268
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002759.1 (pep scaffold:Pmarinus_7.0:GL476598:1070841:1483940:-1 gene:ENSPMAG00000002510.1 transcript:ENSPMAT00000002759.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.6842 bits (130), Expect = 3.231e-8
Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = 3 
Query:  813 TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            TT  GNS G  CHFPF+FG  E+ +C S  R D +            WC+TT N++ D+++  C
Sbjct:  373 TTRGGNSNGALCHFPFVFGGREHVACTSEGRADGMK-----------WCSTTANFDTDQRYGFC 425
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006577.1 (pep scaffold:Pmarinus_7.0:GL477954:3213:54075:-1 gene:ENSPMAG00000005878.1 transcript:ENSPMAT00000006577.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 50.8322 bits (120), Expect = 5.220e-7
Identity = 33/120 (27.50%), Postives = 51/120 (42.50%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQCQLS--PAGYWWCPKDDNFDLHNQKTVCPNTSL-----THAGSDPGRLCKIPFVYKKKFYYACI---RSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQ 683
            D C FP ++    +  C       G  WC    NFD  ++ T C +        +  G+  G LC +PF +  + Y  C    R   E+      WC+TT+D+D D K  +   N  S++
Sbjct:  102 DPCVFPFVFEGMALWGCTARGRTDGRQWCGTTSNFDRDSRYTYCVDEHAEMLVPSQGGNSHGALCALPFSFGGRVYSECTAVGRDDGEL------WCSTTADFDGDGKYGFCPMNGESAR 215

HSP 2 Score: 48.9062 bits (115), Expect = 2.149e-6
Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 3 
Query:  816 TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEES 1019
            T  GN+ GD C FPF+F       C +  RTD              WC TT N++ D ++T CV E +
Sbjct:   94 TRGGNADGDPCVFPFVFEGMALWGCTARGRTDGRQ-----------WCGTTSNFDRDSRYTYCVDEHA 150
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Match: EDO32111 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW03])

HSP 1 Score: 67.0106 bits (162), Expect = 1.070e-13
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSS 680
            C FP  Y+    N+C  +   + WC   +N+D   +   CP+ ++ H G+  G  C  PF+YK K Y  CIR   + N K   WCATT ++D D+K  W  C  N S
Sbjct:   13 CFFPFTYKGVEQNRCIRADRNFRWCATTNNYDNDKEWGFCPHCNVAHGGTAGGDCCHFPFIYKSKVYQKCIR---DSNGKP--WCATTYNFDLDQK--WGYCGGNYS 112

HSP 2 Score: 63.5438 bits (153), Expect = 1.588e-12
Identity = 52/175 (29.71%), Postives = 69/175 (39.43%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEES 1019
            TH G+  G  C  PF YK      CIR+  + N++   WCATT++YDNDK                                               E   CP     + G + GD CHFPF++    Y+ CI          RD S  +P  WCATT N+++D+KW  C    S
Sbjct:    3 THEGTSNGACCFFPFTYKGVEQNRCIRA--DRNFR---WCATTNNYDNDK-----------------------------------------------EWGFCPHCNVAHGGTAGGDCCHFPFIYKSKVYQKCI----------RD-SNGKP--WCATTYNFDLDQKWGYCGGNYS 112
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Match: EDO29980 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T236])

HSP 1 Score: 51.2174 bits (121), Expect = 8.710e-9
Identity = 32/60 (53.33%), Postives = 36/60 (60.00%), Query Frame = 3 
Query:  474 VCPNTSL-THAG-SDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKK 647
            VCP   L  HAG S PG  CK PFVYK    + C R  +E N++   WCATT DYD DKK
Sbjct:    6 VCPPGHLEVHAGNSPPGSCCKFPFVYKGITMHRCTR--EEKNFR---WCATTQDYDKDKK 60
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Match: EDO45372 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RT12])

HSP 1 Score: 50.447 bits (119), Expect = 3.153e-8
Identity = 33/96 (34.38%), Postives = 43/96 (44.79%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKK 647
            C FP +YR K  N C  +     WC    N+D+      C       AG      C  PF+YK + Y AC R     N K   WC+ T++YD D+K
Sbjct:    1 CVFPFVYRGKRYNSCTRARHNRPWCAITPNYDVDKLWGNC-------AGGRGDECCVFPFIYKGRRYNACTRR----NSKRGPWCSLTNNYDKDRK 85
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Match: EDO29979 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T235])

HSP 1 Score: 47.3654 bits (111), Expect = 1.511e-7
Identity = 24/63 (38.10%), Postives = 32/63 (50.79%), Query Frame = 3 
Query:  816 TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            T+ GNS G  C FPF++  + Y SC +   ++  H           WCATT NY  D+KW  C
Sbjct:    1 THGGNSEGACCMFPFVYQNTTYNSCTNTDASNGQH-----------WCATTGNYEQDQKWGYC 52

HSP 2 Score: 42.743 bits (99), Expect = 7.736e-6
Identity = 23/57 (40.35%), Postives = 31/57 (54.39%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRC 665
            TH G+  G  C  PFVY+   Y +C  + D  N +   WCATT +Y+ D+K  W  C
Sbjct:    1 THGGNSEGACCMFPFVYQNTTYNSCTNT-DASNGQH--WCATTGNYEQDQK--WGYC 52
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Match: EDO45377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RT17])

HSP 1 Score: 47.3654 bits (111), Expect = 2.365e-7
Identity = 31/96 (32.29%), Postives = 42/96 (43.75%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKK 647
            C FP +YR K  N C  +     WC    N+D                    G  C +PFVY+ + Y +C R    VN K   WC+ T++YD D+K
Sbjct:    1 CVFPFVYRGKRHNSCTRARHNRPWCAMTPNYD--------------------GDCCALPFVYRGRRYSSCTR----VNSKRGPWCSLTNNYDKDRK 72
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Match: mmp9 (matrix metallopeptidase 9 [Source:NCBI gene;Acc:100125420])

HSP 1 Score: 83.5741 bits (205), Expect = 6.785e-17
Identity = 66/220 (30.00%), Postives = 84/220 (38.18%), Query Frame = 3 
Query:  357 VCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETT-YAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            +C FP ++  K    C  +       WC   D++D   +   CP+  L T  G+  G  C  PFV+    Y +C     E     Y WCATTS+YD DKK  +                                               CP T+TT   GN+ G+ CHFPF F   EY SC S  R D             LWC TT +Y+ DKKW  C
Sbjct:  231 MCHFPFVFGGKTYTSCTSEGRADKLPWCSTTDDYDRDGKYGFCPSELLYTIGGNSDGAKCVFPFVFLGDEYDSCTT---EGRRDGYRWCATTSNYDQDKKYGF-----------------------------------------------CPNTDTTTIGGNAEGEPCHFPFEFLGKEYDSCTSEGRGDG-----------KLWCGTTASYDDDKKWGFC 389

HSP 2 Score: 62.003 bits (149), Expect = 5.954e-10
Identity = 51/177 (28.81%), Postives = 65/177 (36.72%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESV 1022
            T+ G+  G +C  PFV+  K Y +C     E       WC+TT DYD D K  +                                               CP     T  GNS G KC FPF+F   EY SC +  R D            Y WCATT NY+ DKK+  C + ++ 
Sbjct:  222 TYYGNADGAMCHFPFVFGGKTYTSCTS---EGRADKLPWCSTTDDYDRDGKYGF-----------------------------------------------CPSELLYTIGGNSDGAKCVFPFVFLGDEYDSCTTEGRRDG-----------YRWCATTSNYDQDKKYGFCPNTDTT 337

HSP 3 Score: 53.9138 bits (128), Expect = 2.164e-7
Identity = 36/112 (32.14%), Postives = 47/112 (41.96%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSP--AGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDP-GRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C FP ++     + C       GY WC    N+D   +   CPNT  T  G +  G  C  PF +  K Y +C     E       WC TT+ YD+DKK  W  C +    L
Sbjct:  290 CVFPFVFLGDEYDSCTTEGRRDGYRWCATTSNYDQDKKYGFCPNTDTTTIGGNAEGEPCHFPFEFLGKEYDSCTS---EGRGDGKLWCGTTASYDDDKK--WGFCPDQGYSL 396
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Match: mmp9 (matrix metallopeptidase 9 [Source:NCBI gene;Acc:100125420])

HSP 1 Score: 83.1889 bits (204), Expect = 9.643e-17
Identity = 66/220 (30.00%), Postives = 84/220 (38.18%), Query Frame = 3 
Query:  357 VCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETT-YAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            +C FP ++  K    C  +       WC   D++D   +   CP+  L T  G+  G  C  PFV+    Y +C     E     Y WCATTS+YD DKK  +                                               CP T+TT   GN+ G+ CHFPF F   EY SC S  R D             LWC TT +Y+ DKKW  C
Sbjct:  231 MCHFPFVFGGKTYTSCTSEGRADKLPWCSTTDDYDRDGKYGFCPSELLYTIGGNSDGAKCVFPFVFLGDEYDSCTT---EGRRDGYRWCATTSNYDQDKKYGF-----------------------------------------------CPNTDTTTIGGNAEGEPCHFPFEFLGKEYDSCTSEGRGDG-----------KLWCGTTASYDDDKKWGFC 389

HSP 2 Score: 61.6178 bits (148), Expect = 8.169e-10
Identity = 51/177 (28.81%), Postives = 65/177 (36.72%), Query Frame = 3 
Query:  495 THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTET-TYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESV 1022
            T+ G+  G +C  PFV+  K Y +C     E       WC+TT DYD D K  +                                               CP     T  GNS G KC FPF+F   EY SC +  R D            Y WCATT NY+ DKK+  C + ++ 
Sbjct:  222 TYYGNADGAMCHFPFVFGGKTYTSCTS---EGRADKLPWCSTTDDYDRDGKYGF-----------------------------------------------CPSELLYTIGGNSDGAKCVFPFVFLGDEYDSCTTEGRRDG-----------YRWCATTSNYDQDKKYGFCPNTDTT 337

HSP 3 Score: 53.9138 bits (128), Expect = 2.491e-7
Identity = 36/112 (32.14%), Postives = 47/112 (41.96%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQCQLSP--AGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDP-GRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C FP ++     + C       GY WC    N+D   +   CPNT  T  G +  G  C  PF +  K Y +C     E       WC TT+ YD+DKK  W  C +    L
Sbjct:  290 CVFPFVFLGDEYDSCTTEGRRDGYRWCATTSNYDQDKKYGFCPNTDTTTIGGNAEGEPCHFPFEFLGKEYDSCTS---EGRGDGKLWCGTTASYDDDKK--WGFCPDQGYSL 396
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Match: mmp2 (matrix metallopeptidase 2 [Source:NCBI gene;Acc:100125419])

HSP 1 Score: 78.1814 bits (191), Expect = 4.627e-15
Identity = 63/221 (28.51%), Postives = 84/221 (38.01%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            + C+FP ++       C  Q    G+ WC    NFD   +   CP+  L T  G+  G  CK PF ++ K Y +C     +  Y+   WCATT DYD D                        SY                          CP T  +T  GN  G  C FPF F    Y SC ++ R+D             +WCATT +Y+ D+KW  C
Sbjct:  231 EFCKFPFLFMGTEYKSCTAQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNGDGAPCKFPFTFQGKQYDSCTTEGRDDGYR---WCATTEDYDRDT-----------------------SYGF------------------------CPETAMSTVGGNGEGSPCVFPFTFLGDTYESCTTSGRSDG-----------KMWCATTKSYDDDRKWGFC 390

HSP 2 Score: 53.5286 bits (127), Expect = 2.810e-7
Identity = 35/112 (31.25%), Postives = 53/112 (47.32%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++ K  + C  +    GY WC   +++D       CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT  YD+D  R+W  C +    L
Sbjct:  291 CKFPFTFQGKQYDSCTTEGRDDGYRWCATTEDYDRDTSYGFCPETAMSTVGGNGEGSPCVFPFTFLGDTYESCTTS-GRSDGKM--WCATTKSYDDD--RKWGFCPDQGYSL 397

HSP 3 Score: 48.9062 bits (115), Expect = 7.844e-6
Identity = 25/63 (39.68%), Postives = 35/63 (55.56%), Query Frame = 3 
Query:  825 GNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            GN+ G+ C FPFLF  +EY+SC +  R D            +LWC+TT N++ D K+  C  E
Sbjct:  226 GNADGEFCKFPFLFMGTEYKSCTAQGRDDG-----------FLWCSTTYNFDEDGKYGFCPHE 277
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Match: mmp2 (matrix metallopeptidase 2 [Source:NCBI gene;Acc:100125419])

HSP 1 Score: 78.1814 bits (191), Expect = 4.730e-15
Identity = 61/221 (27.60%), Postives = 83/221 (37.56%), Query Frame = 3 
Query:  354 DVCEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTE-TTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            + C+FP ++       C  Q    G+ WC    NFD   +   CP+  L T  G+  G  CK PF ++ K Y +C     +  Y+   WCATT DYD D    +                                               CP T  +T  GN  G  C FPF F    Y SC ++ R+D             +WCATT +Y+ D+KW  C
Sbjct:  231 EFCKFPFLFMGTEYKSCTAQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNGDGAPCKFPFTFQGKQYDSCTTEGRDDGYR---WCATTEDYDRDTSYGF-----------------------------------------------CPETAMSTVGGNGEGSPCVFPFTFLGDTYESCTTSGRSDG-----------KMWCATTKSYDDDRKWGFC 390

HSP 2 Score: 53.5286 bits (127), Expect = 2.882e-7
Identity = 35/112 (31.25%), Postives = 53/112 (47.32%), Query Frame = 3 
Query:  360 CEFPSIYRDKLINQC--QLSPAGYWWCPKDDNFDLHNQKTVCPNTSL-THAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQL 686
            C+FP  ++ K  + C  +    GY WC   +++D       CP T++ T  G+  G  C  PF +    Y +C  S    + K+  WCATT  YD+D  R+W  C +    L
Sbjct:  291 CKFPFTFQGKQYDSCTTEGRDDGYRWCATTEDYDRDTSYGFCPETAMSTVGGNGEGSPCVFPFTFLGDTYESCTTS-GRSDGKM--WCATTKSYDDD--RKWGFCPDQGYSL 397

HSP 3 Score: 48.9062 bits (115), Expect = 7.829e-6
Identity = 25/63 (39.68%), Postives = 35/63 (55.56%), Query Frame = 3 
Query:  825 GNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSE 1013
            GN+ G+ C FPFLF  +EY+SC +  R D            +LWC+TT N++ D K+  C  E
Sbjct:  226 GNADGEFCKFPFLFMGTEYKSCTAQGRDDG-----------FLWCSTTYNFDEDGKYGFCPHE 277
[Close]
BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Match: fn1 (fibronectin-1 [Source:NCBI gene;Acc:100529198])

HSP 1 Score: 56.225 bits (134), Expect = 6.172e-8
Identity = 46/172 (26.74%), Postives = 68/172 (39.53%), Query Frame = 3 
Query:  498 HAGSDPGRLCKIPFVYKKKFYYACI---RSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            + G+  G  C  PFV+K K Y +C    RS  ++      WC+TTSD++ D+K  ++ C                                    TE+K +        T  GNS G  CHFPFL+    Y  C +  R D +            WC TT NY+ ++++  C
Sbjct:  343 YGGNSGGLPCVFPFVHKGKTYLSCTSDGRSDGQL------WCSTTSDFEKDQK--YSFC------------------------------------TEKKVVV------ATRGGNSNGALCHFPFLYNGRNYTDCTADGRRDGMK-----------WCGTTANYDAEQRFGFC 453
[Close]
BLAST of Matrix metallopeptidase 9 vs. Planmine SMEST
Match: SMESG000037117.1 (SMESG000037117.1)

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 334/335 (99.70%), Postives = 335/335 (100.00%), Query Frame = 3 
Query:  258 MNCFRIFLLSLALLDHGKLFCKLIPFSFRSPVDVCEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRXXXXXXXXXXXXXXXXXXXXXXYFFCEGGRQNKRDIWGHQSQYISHSANVNHPATPTAPPSYHEAVMSLTNII 1262
            MNCFRIFLLSLALLDHGKLFCKLIPFSFRSPVDVCEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRVLIPVL+VLGILGLVLLLAALLYFFCEGGRQNKRDIWGHQSQYISHSANVNHPATPTAPPSYHEAVMSLTNII
Sbjct:    1 MNCFRIFLLSLALLDHGKLFCKLIPFSFRSPVDVCEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKCVSEESVLRWSDKRVLIPVLIVLGILGLVLLLAALLYFFCEGGRQNKRDIWGHQSQYISHSANVNHPATPTAPPSYHEAVMSLTNII 335
[Close]
BLAST of Matrix metallopeptidase 9 vs. Planmine SMEST
Match: SMESG000060653.1 (SMESG000060653.1)

HSP 1 Score: 202.216 bits (513), Expect = 6.424e-62
Identity = 105/238 (44.12%), Postives = 144/238 (60.50%), Query Frame = 3 
Query:  297 LDHGKLFCKLIPFSFRSPVDV--CEFPSIYRDKLINQCQLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKKFYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSNVTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHFPFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC 1004
            L + K+F  +I  SF S  D   C FPS+Y++K I  CQL+  G+WWCP D+N+D +    +CP+T  T AG+DPG+ CK PF++     Y C+++ D      +WWCATT +YD D  R+WT+C  +S +LPCYFSN    +   I+S+C  F    +C TE  EIR+CP T +TY GN PG  CHFPF + Q EY+ C+ ++ TD          E  LWC+TT N+   KKWT C
Sbjct:   10 LFYPKIFV-VIFNSFLSITDAENCVFPSLYKNKPIFDCQLNSNGHWWCPLDENYDSYRTWQLCPSTKKTFAGNDPGKPCKFPFIFDSNPVYTCLKANDSK----FWWCATTDNYDID--RKWTKCRPDSDELPCYFSNYGQVHVAKIDSQCHSFSGDLICKTETNEIRKCPFTSSTYGGNDPGKMCHFPFYYKQMEYKGCVRSQFTDD------QLDEGALWCSTTINFETHKKWTLC 234
The following BLAST results are available for this feature:
BLAST of Matrix metallopeptidase 9 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MMP21.333e-1730.14matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:... [more]
MMP21.333e-1730.14matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:... [more]
MMP21.378e-1730.14matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:... [more]
MMP21.554e-1730.14matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:... [more]
MMP96.765e-1629.22matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
mmp91.207e-1633.52matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
mmp22.066e-1528.51matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GEN... [more]
sel1l6.030e-738.67SEL1L adaptor subunit of ERAD E3 ubiquitin ligase ... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pax62.580e-1728.14paired box 6 [Source:Xenbase;Acc:XB-GENE-484088][more]
pax63.001e-1728.14paired box 6 [Source:Xenbase;Acc:XB-GENE-484088][more]
pax63.362e-1728.14paired box 6 [Source:Xenbase;Acc:XB-GENE-484088][more]
pax64.136e-1728.14paired box 6 [Source:Xenbase;Acc:XB-GENE-484088][more]
pax64.147e-1728.14paired box 6 [Source:Xenbase;Acc:XB-GENE-484088][more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Mmp22.594e-1629.22matrix metallopeptidase 2 [Source:MGI Symbol;Acc:M... [more]
Mmp93.936e-1531.06matrix metallopeptidase 9 [Source:MGI Symbol;Acc:M... [more]
Fn12.117e-925.88fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566][more]
Fn12.144e-925.88fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566][more]
Fn12.144e-925.88fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566][more]
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BLAST of Matrix metallopeptidase 9 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P08253|MMP2_HUMAN7.462e-1730.1472 kDa type IV collagenase OS=Homo sapiens OX=9606... [more]
sp|Q90611|MMP2_CHICK3.711e-1630.1472 kDa type IV collagenase OS=Gallus gallus OX=903... [more]
sp|P33436|MMP2_RAT8.316e-1629.2272 kDa type IV collagenase OS=Rattus norvegicus OX... [more]
sp|P50757|MMP2_RABIT8.620e-1629.2272 kDa type IV collagenase OS=Oryctolagus cuniculu... [more]
sp|P33434|MMP2_MOUSE1.814e-1529.2272 kDa type IV collagenase OS=Mus musculus OX=1009... [more]
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BLAST of Matrix metallopeptidase 9 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2H1CT905.798e-3934.55Epididymal sperm-binding protein 1 OS=Fasciola hep... [more]
A0A504Z1802.003e-3835.56Matrix metallopeptidase-9 (M10 family) OS=Fasciola... [more]
H2KSV55.285e-3831.94Epididymal sperm-binding protein 1 OS=Clonorchis s... [more]
A0A075A8C51.128e-3633.33Uncharacterized protein OS=Opisthorchis viverrini ... [more]
A0A419QF601.128e-3631.29Epididymal sperm-binding protein 1 OS=Clonorchis s... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mmp96.012e-1834.97matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
mmp96.175e-1834.97matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
mmp97.715e-1834.97matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
mmp91.511e-1430.96matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
mmp91.600e-1430.96matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GEN... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
mmp21.510e-1326.94matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GEN... [more]
ENSPMAT00000002759.13.231e-839.06pep scaffold:Pmarinus_7.0:GL476598:1070841:1483940... [more]
ENSPMAT00000006577.15.220e-727.50pep scaffold:Pmarinus_7.0:GL477954:3213:54075:-1 g... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO321111.070e-1336.45Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO299808.710e-953.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO453723.153e-834.38Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO299791.511e-738.10Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO453772.365e-732.29Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Matrix metallopeptidase 9 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mmp96.785e-1730.00matrix metallopeptidase 9 [Source:NCBI gene;Acc:10... [more]
mmp99.643e-1730.00matrix metallopeptidase 9 [Source:NCBI gene;Acc:10... [more]
mmp24.627e-1528.51matrix metallopeptidase 2 [Source:NCBI gene;Acc:10... [more]
mmp24.730e-1527.60matrix metallopeptidase 2 [Source:NCBI gene;Acc:10... [more]
fn16.172e-826.74fibronectin-1 [Source:NCBI gene;Acc:100529198][more]
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BLAST of Matrix metallopeptidase 9 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000037117.10.000e+099.70SMESG000037117.1[more]
SMESG000060653.16.424e-6244.12SMESG000060653.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30004716 ID=SMED30004716|Name=Matrix metallopeptidase 9|organism=Schmidtea mediterranea sexual|type=transcript|length=1281bp
GTTCATCTCTAAATGTGTGTGCATGCATGCATGCATGCAACTCGTTCTGA
TACACACCGCACATACCAGACAGACACACATACTGCCATTCTCTACCCTT
CCTCCAGTGTTGTATCCGGCACACACTCACAGACACACGGGCATTATTTC
AGGCGACAAAATGCATGTTTTCGGTTTGTTAGTTTTCGTGGGATGATTGA
AAGCTAATCCGTCAGATTTCCTAAGATTCCCAATGCGATTGCTATGCTCA
ATGTATGATGAATTGTTTCAGGATTTTCCTTTTGTCGCTCGCTCTTCTTG
ATCATGGAAAGCTCTTTTGTAAATTGATTCCATTCTCGTTTCGGTCGCCA
GTTGATGTCTGTGAATTCCCATCGATTTACAGAGACAAATTGATCAATCA
GTGCCAGCTGAGTCCCGCCGGCTATTGGTGGTGTCCTAAGGATGACAATT
TCGATTTGCACAACCAGAAAACCGTTTGCCCCAACACCTCTCTCACTCAC
GCAGGAAGTGATCCCGGAAGGCTGTGCAAGATTCCGTTCGTGTACAAAAA
GAAATTCTATTACGCGTGCATCCGATCGATTGATGAAGTGAATTACAAAG
TCTATTGGTGGTGCGCAACGACCTCCGATTACGACAACGACAAAAAGCGC
CGCTGGACTCGATGCAATGAAAACAGCAGCCAATTGCCATGCTATTTCTC
TAACGTCACAGATTCTTATGCAACTGGGATTAACTCAGAATGCCGATTGT
TTTACAATAAATGGGTGTGCAACACGGAGCGCAAGGAAATCCGCGAGTGC
CCCAGAACCGAGACGACTTACGCCGGCAACAGTCCAGGCGATAAATGCCA
TTTCCCATTTCTATTCGGTCAGTCGGAGTATCGGAGCTGCATATCGGCAA
AACGCACCGATACCATCCACTATCGGGACGCTAGTCAATTTGAGCCCTAT
CTCTGGTGTGCTACAACCCCAAATTATAACATTGACAAGAAATGGACAAA
ATGCGTCAGCGAAGAGTCGGTATTGCGGTGGAGTGACAAGCGGGTTTTGA
TTCCGGTTCTCGTCGTGTTGGGTATTCTCGGACTCGTGCTTTTATTGGCG
GCTTTGCTCTACTTTTTTTGTGAAGGAGGTCGGCAAAATAAGCGAGACAT
TTGGGGTCATCAATCTCAATACATATCGCATTCCGCTAATGTCAATCATC
CTGCCACCCCTACTGCCCCACCCTCCTATCACGAGGCCGTCATGTCTCTG
ACAAATATCATTTGATGTGTATATGTTGTAA
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protein sequence of SMED30004716-orf-1

>SMED30004716-orf-1 ID=SMED30004716-orf-1|Name=SMED30004716-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=337bp
MMNCFRIFLLSLALLDHGKLFCKLIPFSFRSPVDVCEFPSIYRDKLINQC
QLSPAGYWWCPKDDNFDLHNQKTVCPNTSLTHAGSDPGRLCKIPFVYKKK
FYYACIRSIDEVNYKVYWWCATTSDYDNDKKRRWTRCNENSSQLPCYFSN
VTDSYATGINSECRLFYNKWVCNTERKEIRECPRTETTYAGNSPGDKCHF
PFLFGQSEYRSCISAKRTDTIHYRDASQFEPYLWCATTPNYNIDKKWTKC
VSEESVLRWSDKRVLIPVLVVLGILGLVLLLAALLYFFCEGGRQNKRDIW
GHQSQYISHSANVNHPATPTAPPSYHEAVMSLTNII*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008233peptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO:0016787hydrolase activity
GO:0046872metal ion binding
Vocabulary: biological process
TermDefinition
GO:0006508proteolysis
Vocabulary: cellular component
TermDefinition
GO:0031012extracellular matrix
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000418head
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR036943FN_type2_sf
IPR000562FN_type2_dom
IPR013806Kringle-like
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00013FNTYPEIIcoord: 195..204
score: 58.93
coord: 206..218
score: 29.95
coord: 234..249
score: 49.92
NoneNo IPR availablePANTHERPTHR22918:SF8EPIDIDYMAL SPERM-BINDING PROTEIN 1coord: 21..131
NoneNo IPR availablePANTHERPTHR22918SEMINAL PLASMA PROTEINcoord: 21..131
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.625
NoneNo IPR availableTMHMMTMhelixcoord: 266..288
IPR000562Fibronectin type II domainSMARTSM00059FN2_2coord: 84..137
e-value: 2.7E-6
score: 33.2
coord: 191..250
e-value: 5.8E-11
score: 52.4
IPR000562Fibronectin type II domainPFAMPF00040fn2coord: 198..250
e-value: 8.9E-12
score: 45.1
coord: 91..137
e-value: 1.6E-8
score: 34.7
IPR000562Fibronectin type II domainPROSITEPS51092FN2_2coord: 193..252
score: 16.189
IPR000562Fibronectin type II domainPROSITEPS51092FN2_2coord: 31..77
score: 10.76
IPR000562Fibronectin type II domainPROSITEPS51092FN2_2coord: 86..139
score: 14.704
IPR000562Fibronectin type II domainCDDcd00062FN2coord: 192..250
e-value: 3.57442E-12
score: 58.471
IPR036943Fibronectin type II domain superfamilyGENE3DG3DSA:2.10.10.10coord: 79..141
e-value: 1.3E-14
score: 55.7
coord: 185..253
e-value: 2.4E-18
score: 67.7
coord: 29..78
e-value: 1.3E-5
score: 26.9
IPR013806Kringle-like foldSUPERFAMILYSSF57440Kringle-likecoord: 81..139
IPR013806Kringle-like foldSUPERFAMILYSSF57440Kringle-likecoord: 187..251
IPR013806Kringle-like foldSUPERFAMILYSSF57440Kringle-likecoord: 32..76