G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30004551 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A183SJQ7 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4455 PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.431e-22 Identity = 107/369 (29.00%), Postives = 177/369 (47.97%), Query Frame = 3 Query: 570 MFIVKYINNCLIAQSNKTMIDNRESSSKIYATVSMAL-ATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALI-ILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKT---------YCFFIYQSVLPVVIVGIVSL-------------AMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIK--LTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIF 1598 M + Y+NNC + + ++I TVS+ + ++ A + +LI+L R N RFG ++ +L+ L+ +E +L I H V E S + + L I F + S C+RNW V +IA SRCE I P R + N +II L+ ++ + S +RL ++C + L+++ RL T FF YQS +P+ IV + ++ A + ST ++ ++ ++ ++ +L +Q +ATRTI +A VFT+LE PVF I +V F NH +++K + +L L++LDS +NIV+YLLTS+ FR E+ R+ Sbjct: 1 MLNLHYLNNC------QELPPVELEDARI--TVSLLVCSSFAIMLELIALIVLAR-NGAKRFGSMRKSLIALTSIEMWLNTSI-FVHKVWEDYGSPHPETLLAYILAAISFSLLNSAICSRNWCVTLIALSRCEAITRPLAHRSSKQILSPNRQIILLVCVVTLAMVFSAIRLTFLSIVVCTN----------LEHKVIRLPPTNSTNAQIFEKVFFAYQSAIPISIVALATVFMIWTLLRPRIESAKKSPSAKAQPQLQRQSTVSGTNNHGKILPRGYEKKNAPRLTNQVRATRTIFFIAAVFTILEAPVFFI--IV----FENHIGIEVKKVIVQLLKFLIILDSYTNIVIYLLTSEHFRTELIRML 343
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A3P7M935 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS14106 PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.030e-21 Identity = 118/412 (28.64%), Postives = 195/412 (47.33%), Query Frame = 3 Query: 570 MFIVKYINNCLIAQSNKTMIDNRESSSKIYATVSMAL-ATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALI-ILFFSYCISFVRLFAKKALICQDTN-----VPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAM---------XXXXXXXXXXXXXXXTHINDCSYFRMNHLS------DQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNH--SILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDENNYLSATEHLVVHQNNV-LSLLSAIPLSTRSNPS 1730 M ++Y+N+C K + ++I TVS+ + ++ A + +LI+L R + RFG ++ +L+ L+ +E +L I H V E S + + L I+F + S C+RNW V +IA SRCE I P R + N ++I L+ ++ S VRL ++C + N +P AN A R K FF YQS +P+ IV + ++ M + + + ++ NH ++R+ SR L +Q +ATRTI +A VFT+LE PVF I +V F NH S +++ + +L L++LDS +NI +YLLTS+ FR E+ R+ +C Y + H + + + S PL ++++P Sbjct: 1 MLNLQYLNDC------KELPPVVLEDARI--TVSLLVCSSFAILLELIALIVLARHRAK-RFGSMRKSLIALTSIEMWLNTSI-FVHKVWEDYGSPHPETLLSYILAAILFSLLNSAICSRNWCVTLIALSRCEAITRPLAHRSSKQLLSPNRQLILLVFVIILGIIFSAVRLTFLNIVVCTNLNNTVIRLPP-AN---STNAGRFEKV--FFAYQSAIPISIVALATVFMIWTLLRPKIAAAKRTPSSPEIQRQLQCPSTAHGSHNHGKILPRGYEKRNVSR-LTNQVRATRTIFFIAAVFTVLEAPVFFI--IV----FENHIGSDVRVVIVQLLKFLIILDSYTNIAIYLLTSEHFRTELIRML----TC-----GRYRTEKAHSRIRNTKLAIQRPSKTPLPSQASPP 380
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3T6F1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS2638 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.044e-18 Identity = 109/379 (28.76%), Postives = 179/379 (47.23%), Query Frame = 3 Query: 576 IVKYINNCLIAQSNKTMIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITL-----FHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLK-FNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAY-RLFK--TYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHIN------------DCSYFRMNHLSDQ-------------------RHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSN--HSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEV 1586 +V Y + C A N+T ++ SSK + T+ M LA A + +L +LTR + RFG ++ +L+ L+ +E +LT I + +V+ ++++ + L I+F ++ S TC+RNW V IA +RCE+I P +R F+ I +I + ++ +R+ + +IC TN+ + H + +Y R K FF YQS +P+ +V I +L M +LL S + N +C + S+ RH+ R L +Q +ATR I+ +A VF + E PVF +VV + S L I L +L+++DS SN +YLLTS FR+E+ Sbjct: 24 LVYYSDTCDPAILNRTNEYDQVQSSKAHITL-MVLAAFAVVLEAIALGVLTRPGAT-RFGSMRQSLVTLTAIEMWLTSTILVNKLWDLYVIEKHEK------LPELCFSFILFLSVNSATCSRNWAVTFIALARCEVITRPVATRISTHIFSPRRQLIYIVIFILIGVIMATIRISIRPMVIC--TNLDSIV-HFPNVSSYSRTSKIIENTFFAYQSAIPITVVTIATLFMIVALLRHRMPSEKKTKQRNAFNCTNDEEKSWNCCRIQGKRGSNGTPGKEENGTGSVVKSIQTVRHAQR-LPNQIRATRFIIFIATVFIVCEAPVFF--AVVFKSAISELFGKFLNIYL----RLLIIIDSFSNFFIYLLTSKPFRVEL 384
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SJV1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS5214 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.321e-18 Identity = 106/377 (28.12%), Postives = 175/377 (46.42%), Query Frame = 3 Query: 576 IVKYINNCLIAQSNKTMIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITL-----FHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLK-FNHHNTKIIALIILFFSYCISFVRLFAKKALICQD-TNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHIND-------------CSYFRMNHLSDQ------------------RHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSN--HSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEV 1586 +V Y + C A N+T + +SK + T+ M LA A + +L +LTR + RFG ++ +L+ L+ +E +LT I + +V+ +Y++ + L I+F ++ S TC+RNW+V IA +RCE+I P +R F+ I I + ++ +R+ + +IC + ++ N +A ++ + FF YQS +P+ +V I +L M +LL S C R +D RH+ R L +Q +ATR I+ +A VF + E PVF +VV + S L I L +L+++DS SN V+YLLTS FR+E+ Sbjct: 9 LVYYSDACDPAILNQTNEYEQVQNSKAHITL-MILAAFAVVLEAIALGVLTRPGAT-RFGSMRQSLVTLTAIEMWLTSTILVNKLWDLYVIEKYEK------LPELCFSFILFLSVNSATCSRNWVVTFIALARCEVITRPVATRVSTHIFSPRRQLIYIAIFILVGVIMATIRISIRPMVICTNLESIVHFPNVSRYSKASKIIEN-TFFAYQSAIPITVVTIATLFMIIALLRHRMPSEKKEKQEEKFKCETDQRQSWTCCRIQRKRQRTDTSGKDEDGCGSVVKSIQTVRHAQR-LPNQIRATRFIIFIATVFIVCEAPVFF--AVVFKSAISELFGKFLNIYL----RLLIIVDSFSNFVIYLLTSRPFRVEL 369
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: G7Y2I6 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Clonorchis sinensis OX=79923 GN=CLF_100044 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-17 Identity = 97/367 (26.43%), Postives = 173/367 (47.14%), Query Frame = 3 Query: 570 MFIVKYINNCLIAQSNKTMIDNRESSSKIYATVSMAL-ATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIG----LLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSR--RGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXX-----THINDCSYFRMNHLSDQRHSS---------RKLNSQRKATRTILVLAVVFTLLEVPVF---IIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIF 1598 M V + N+C+ + + S+ Y + + + ++ A + F+L++LTR+ S +R G +++NL+ L++ E L I++F+ ++ R S I + +++ F + CTRNWI+ +IA +RC I P SR F + ++ + Y + F RL + ICQ+ + D F Y +FI+Q+ LP++I+ I ++ M LL + + T CS ++ + S +H+ R+ +Q +ATR I +LA F + E PVF +++ +R F + +T LVVLDSC+N+ +Y+L S +FR E R+ Sbjct: 1 MSFVTFKNDCVAISGGQ-----KPSTEATYIYILLVVVSSWALVMGIFALVVLTRRRS-IRMGSMRVNLMTLTIFEIILN--ISIFYCILT--RLTVSADIAERLVVALVNIFSFCVLQGSLCTRNWIITLIALARCVAITRPMASRLMSTHLFRPKPLGCLTVLCILTGYILGFSRLVEMEITICQNLDKRVRLTETTDPWK---FPRYTYFIFQAALPIIILFISTVIMVTVLLRARVLTIDTRENNQGTKRIKCSPSQLRNSSGAQHTRMCAEKRVNYRRAQNQLRATRMITLLAATFIIFESPVFFCVVLEHHFERAHFRS-------VTWAVKSLVVLDSCANVFIYVLVSKRFRQESARLL 347
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO38784 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBY6]) HSP 1 Score: 48.521 bits (114), Expect = 6.178e-6 Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 1377 TRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDENNYLSATEH 1658 TRT+ V+ V+F LL +P I ++D N S L L + S IL L SCSN +VY L + +FR +VR+ + C + +Y S TEH Sbjct: 233 TRTLAVIVVLFALLMLPHEIAWMLLDFGPDPN-SKLADTLIKFSPILTYLHSCSNPLVYGLMTTQFRNDVRKYVY----CCRRYQGSYESETEH 321
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000016965.1 (SMESG000016965.1) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 3 Query: 624 MIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDENNYLSATEHLVVHQNNVLSLLSAIPLSTRSNPSHDKE 1742 MIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKLNLLLLSLVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMSFSLLGSTRSSSYNSTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDENNYLSATEHLVVHQNNVLSLLSAIPLSTRSNPSHDKE Sbjct: 1 MIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKLNLLLLSLVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMSFSLLGSTRSSSYNSTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDENNYLSATEHLVVHQNNVLSLLSAIPLSTRSNPSHDKE 373
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000078733.1 (SMESG000078733.1) HSP 1 Score: 266.929 bits (681), Expect = 2.530e-83 Identity = 167/391 (42.71%), Postives = 245/391 (62.66%), Query Frame = 3 Query: 570 MFIVKYINNCLIAQSNKTMIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHV-----VVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSR---KLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDF-----SNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSC-----QLCDENNYLSATEHLVVHQNNVLS 1688 MF++ + NNC+ + + +S IY+ + + + +A + NG S++IL+R NS+ RFGQI+LNLL+LS+ ET L FIT+F++ + +Y R IG LW+D ++F+NITSL C RNWIV++IACSRCEI+F+P +S GLKFN+ + ++++I SY +S VRLF+KKA++C + + +L HL AY +++TYCFFI+QSVLPV++VG +S M++SL+ + N LS + +S + +SQRKAT+TI VLA+VFT LE PVFIIQ ++ F SN ++ + N LVVLDSCSN +VYL+TSDKFR E RR+ W+ S C Q N+ S TE L+V Q+ ++ Sbjct: 1 MFLISFSNNCVFENITRPTL----ASKPIYSYMMILFSILASLANGVSVVILSRPNSSQRFGQIRLNLLILSISETSLNAFITVFNLTHIVNISQYSR------IGALWIDTMLFWNITSLICNRNWIVILIACSRCEIVFLPLHSVSGLKFNNKVIRNLSILIFIISYLLSSVRLFSKKAIVCTNIDEVKLQPHLSGQWAYSVYETYCFFIFQSVLPVLVVGGISAGMTYSLIKEPNPQLLRPQN---------NTLSQKSYSKTSNIRGSSQRKATKTIFVLAIVFTTLEAPVFIIQILIQNGTFAFILNSNPHVVYFII----NFLVVLDSCSNFMVYLVTSDKFRAEFRRLIWR-SGCYSQGRQRSVINDNFSVTEQLIVTQSQKMA 367
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000031763.1 (SMESG000031763.1) HSP 1 Score: 243.047 bits (619), Expect = 3.184e-74 Identity = 166/374 (44.39%), Postives = 231/374 (61.76%), Query Frame = 3 Query: 570 MFIVKYINNCLIAQSNKTMIDNRESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRD---DFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDEN---NYLSATEHLVVHQ 1673 M I+ + N+C+ SN T N E Y + + L+ +A NG S+IIL+R N++ RFG I+LNLL+LS+ ET L I +F++ E + LL+ D VF+NI +L CTRNWIVV+IA SRCE++F+P NS RGL FN+ K+ ++IIL SY +SFVRLF+KKA++C + + L HL Y +++TYCFFIYQSVLPV++V VSLAM + +C R N L +R + + SQRKATRTI VLA+VFT LE PVFIIQ++ +N++ L+ ++ L N+LVV DSC N+ VY++TSDKFR E+RR+ C ++ LSATEHL+V+Q Sbjct: 1 MLILNFSNSCI--PSNVTSNVNSEP----YRPLIICLSILATFLNGISVIILSRSNASHRFGPIRLNLLILSISETALNSLIAVFNIASESELDKLFSVTALLF-DTFVFWNILTLICTRNWIVVLIALSRCEVVFLPLNSVRGLTFNNSVIKLCSVIILLLSYLLSFVRLFSKKAIVCSNLSKILLEPHLYKSWQYVIYETYCFFIYQSVLPVILVAGVSLAM------FVSLIRGPKEELTECKSSR-NQLGMKRKTIKAF-SQRKATRTIFVLAIVFTSLEGPVFIIQALTQSGMILTGNNNAKLRRQVFFLINLLVVFDSCCNVFVYMITSDKFRGEIRRLMGVFGYCTNGQQSFALGKLSATEHLIVNQ 359
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000063918.1 (SMESG000063918.1) HSP 1 Score: 130.183 bits (326), Expect = 9.395e-33 Identity = 102/353 (28.90%), Postives = 184/353 (52.12%), Query Frame = 3 Query: 570 MFIVKYINNC---LIAQSNKTMIDNR----ESSSKIYATVSMALATMAFIFNGFSLIILTRKNSNLRFGQIKXXXXXXXXVETFLTGFITLFHVVVEYKRSANSGGIGLLWLDLIVFYNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLLDYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQI 1607 MF++ Y+ NC N N + S+ I+ V +A + F+ N ++ L++ R ++ +++E L +I + + + + + + F++I +L C+RNW+V+++A +R E IF P R F+ +++ +I+L S+ +S +R+F KKA++C++ N +H + Y+ F+ +FIYQSV PVVIV I +L M + ++ STH+ YFR N ++ + SQ+KAT TI VLA VFT+ E+P+FII + + + N + L +++ LVV+DSC N ++Y+ TS+ +R ++ +F +I Sbjct: 1 MFLIHYVRNCSNVYYFHKNLNFSSNEYELFDYSTNIFIAV---VAIIGFVTNTLTVFTLSQPRFKGRSHNMRYTSFYHAIIELVLDLWI-FTDKISMFAHLPDDKYVSAMIFSTLTFWSINALLCSRNWMVMLVALARLEAIFRPLKIRSYSIFSSCKSRLYTIIVLLLSFSLSVIRVFYKKAIVCENENKIIFDSHWKNSSLYQCFEI-GYFIYQSVFPVVIVTISTLTM----IYFLFKQTFKSTHLLK-QYFREN-------ETQCMTSQQKATLTITVLAGVFTVTEIPIFII--TLLKFTYPNGLSNLMVLYQITRALVVVDSCCNFLIYVSTSEHYRRDLWYLFQRI 334
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000037130.1 (SMESG000037130.1) HSP 1 Score: 83.9593 bits (206), Expect = 2.282e-17 Identity = 66/245 (26.94%), Postives = 110/245 (44.90%), Query Frame = 3 Query: 900 YNITSLTCTRNWIVVIIACSRCEIIFVPFNSRRGLKFNHHNTKIIALIILFFSYCISFVRLFAKKALICQDTNVPQLANHLL-DYRAYRLFKTYCFFIYQSVLPVVIVGIVSLAMXXXXXXXXXXXXXXXTHINDCSYFRMNHLSDQRHSSRKLNSQRKATRTILVLAVVFTLLEVPVFIIQSVVDRDDFSNHSILKIKLTELSNILVVLDSCSNIVVYLLTSDKFRLEVRRIFWQISSCQLCDE 1631 + I S C RNW VV++ SRCE++ P ++R + F+H+ T I + + S+ +SF+ IC++ L L YR + F+ Y F++QS +PV++ I ++ + L ++ S + HS R T +LV ++VF LL++P FI + F + + I SN +L S N VY +S +FR ++ I QL D+ Sbjct: 79 WGINSFICMRNWTVVLLTLSRCEVVINPLSTRNRMIFSHYRTVIFEISFVTSSFSLSFLNNLRFLIKICENLQGIVLTEKFLAKYRFFHYFQIYGIFMFQSCIPVLVTVIATVIIWVCLQQASSIGRGGSNM----------EIHKHSHSVRT-----NTTGLVLVFSIVFCLLQIPTFIATCI---TTFRSSHLYTIHPDIFSNTFCILGSLLNFFVYAASSKRFRSSLKAILISSERVQLSDQ 305 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30004551 ID=SMED30004551|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1876bpback to top protein sequence of SMED30004551-orf-1 >SMED30004551-orf-1 ID=SMED30004551-orf-1|Name=SMED30004551-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=421bp MFIFHKLTNREILIGWLTLKISPKRIIAQMFIVKYINNCLIAQSNKTMIDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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