Fibrillar collagen

Overview


Name	Fibrillar collagen
Smed ID	SMED30004485
Length (bp)	4391

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Fibrillar collagen (SMED30004485) t-SNE clustered cells

Violin plots show distribution of expression levels for Fibrillar collagen (SMED30004485) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Fibrillar collagen (SMED30004485) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Fibrillar collagen (SMED30004485) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30004485

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
Smed sexual biotype	SMED30004485	h1SMcG0008395	Contig37887	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30004485	h1SMcG0008395	Contig37887	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30004485	h1SMcG0018100	Contig37887	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30004485	h1SMcG0018100	Contig37887	newmark_ests	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
enteric muscle cell	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
pharynx musculature	SMED30004485	h1SMcG0018100	dd_Smed_v6_1070_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
musculature system	SMED30004485	h1SMcG0018100	dd_Smed_v6_1070_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
muscle cell	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:30962434 Cote et al., 2019
muscle cell	SMED30004485	h1SMcG0018100	dd_Smed_v4_1070_0_1	dd_Smed_v4	PMID:30962434 Cote et al., 2019

Note: Hover over icons to view figure legend

Homology

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BLAST of Fibrillar collagen vs. Ensembl Human
Match: COL2A1 (collagen type II alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2200])

HSP 1 Score: 133.65 bits (335), Expect = 1.491e-30
Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 3

Query: 3534 VATMSNRQQGYMIIQADDPLIA--KYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNK-------------FISYSLD-------QQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            +  M   Q    + Q D  + A  K L N  ++I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P    +    PK NW+S  +  K               SY  D         QMTFL+++S + SQ IT +C+N          N  K L I   ND+ I    +  F+Y  L+D C  ++     T +E  S+ T RLPI  I++  +++     +   +I  VCF 
Sbjct: 1167 LQYMRADQAAGGLRQHDAEVDATLKSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANV----PKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPI--IDIAPMDIGGPEQEFGVDIGPVCFL 1418

HSP 2 Score: 56.6102 bits (135), Expect = 4.801e-7
Identity = 83/218 (38.07%), Postives = 102/218 (46.79%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIG------------------QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPGVVGKPGQQGSEGKLG---PEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG  G PG  G  G PG QG +G  GP+G RG  GP G  G PGA G +G                  + G  G++G++G PG  G+PG  GPAGP G                 GE GD+GP G   P GPQG  G+ G+VG PGQ+G  G  G   P G  G  G                      AG+PG+EG+PG DG PG +G +G  G+
Sbjct:  786 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEK---------------GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGD 988

HSP 3 Score: 53.1434 bits (126), Expect = 4.688e-6
Identity = 78/173 (45.09%), Postives = 89/173 (51.45%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G PG+ G  GP G  G  G DGP+G  G  GP G  G PG  G  G+RG  G  G  G  G+VG+ G  G  G  G  G  G  GP G  G  GEKG+ GPPGP G  G+RG PG  G+ G  G  G  GP G  G  G  G+ G+ G  G  G PG  G SG  G
Sbjct:  632 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 804

[Close]

BLAST of Fibrillar collagen vs. Ensembl Human
Match: COL1A2 (collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198])

HSP 1 Score: 132.109 bits (331), Expect = 4.446e-30
Identity = 109/366 (29.78%), Postives = 168/366 (45.90%), Query Frame = 3

Query: 3207 GLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLI---AKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFI------------SYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            GL   +G +G PG  G  GD+G  G +GP G +G  G  GP            +G  G  G+PG+ G  G    RGP G+ G  G  G  GP GP G +G     G  G    +++ +    ++  D  +    K L N  + +  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++VYC     +TCI+     I    P  NW+  S D K +             Y+++         Q+ F+++++N ASQ IT +C+N          N  K + +   ND+ ++   +  F+Y VL D C   + +   T +E  T++P+RLP  DI    +++     +   +I  VCF
Sbjct: 1021 GLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGP------------AGKDGRTGHPGTVGPAGI---RGPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENI----PAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIA--PLDIGGADQEFFVDIGPVCF 1365

HSP 2 Score: 63.5438 bits (153), Expect = 3.588e-9
Identity = 81/176 (46.02%), Postives = 97/176 (55.11%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPG---PNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  G+DG+PG+    GPPGR G  G    +GERGYPG   P G  G+PG  G +G  GK G++GETG  G VG  G  GP GP GP G RG +G        GEKG  G PG  G  G +G PG+ G  G QG+ G +GP G  G  GP+G  GK+G  G  G  G  G+ G  G 
Sbjct:  922 GEAGRDGNPGN---DGPPGRDGQPGH---KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEP------GEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGH 1085

[Close]

BLAST of Fibrillar collagen vs. Ensembl Human
Match: COL1A2 (collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198])

HSP 1 Score: 131.724 bits (330), Expect = 5.131e-30
Identity = 109/366 (29.78%), Postives = 168/366 (45.90%), Query Frame = 3

Query: 3207 GLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLI---AKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFI------------SYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            GL   +G +G PG  G  GD+G  G +GP G +G  G  GP            +G  G  G+PG+ G  G    RGP G+ G  G  G  GP GP G +G     G  G    +++ +    ++  D  +    K L N  + +  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++VYC     +TCI+     I    P  NW+  S D K +             Y+++         Q+ F+++++N ASQ IT +C+N          N  K + +   ND+ ++   +  F+Y VL D C   + +   T +E  T++P+RLP  DI    +++     +   +I  VCF
Sbjct: 1019 GLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGP------------AGKDGRTGHPGTVGPAGI---RGPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENI----PAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIA--PLDIGGADQEFFVDIGPVCF 1363

HSP 2 Score: 63.5438 bits (153), Expect = 3.410e-9
Identity = 81/176 (46.02%), Postives = 97/176 (55.11%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPG---PNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  G+DG+PG+    GPPGR G  G    +GERGYPG   P G  G+PG  G +G  GK G++GETG  G VG  G  GP GP GP G RG +G        GEKG  G PG  G  G +G PG+ G  G QG+ G +GP G  G  GP+G  GK+G  G  G  G  G+ G  G 
Sbjct:  920 GEAGRDGNPGN---DGPPGRDGQPGH---KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEP------GEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGH 1083

[Close]

BLAST of Fibrillar collagen vs. Ensembl Human
Match: COL2A1 (collagen type II alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2200])

HSP 1 Score: 130.568 bits (327), Expect = 1.250e-29
Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 3

Query: 3534 VATMSNRQQGYMIIQADDPLIA--KYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNK-------------FISYSLD-------QQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            +  M   Q    + Q D  + A  K L N  ++I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P    +    PK NW+S  +  K               SY  D         QMTFL+++S + SQ IT +C+N          N  K L I   ND+ I    +  F+Y  L+D C  ++     T +E  S+ T RLPI  I++  +++     +   +I  VCF 
Sbjct: 1236 LQYMRADQAAGGLRQHDAEVDATLKSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANV----PKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPI--IDIAPMDIGGPEQEFGVDIGPVCFL 1487

HSP 2 Score: 57.7658 bits (138), Expect = 2.266e-7
Identity = 83/218 (38.07%), Postives = 102/218 (46.79%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIG------------------QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPGVVGKPGQQGSEGKLG---PEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG  G PG  G  G PG QG +G  GP+G RG  GP G  G PGA G +G                  + G  G++G++G PG  G+PG  GPAGP G                 GE GD+GP G   P GPQG  G+ G+VG PGQ+G  G  G   P G  G  G                      AG+PG+EG+PG DG PG +G +G  G+
Sbjct:  855 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEK---------------GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGD 1057

HSP 3 Score: 54.6842 bits (130), Expect = 1.717e-6
Identity = 78/173 (45.09%), Postives = 89/173 (51.45%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G PG+ G  GP G  G  G DGP+G  G  GP G  G PG  G  G+RG  G  G  G  G+VG+ G  G  G  G  G  G  GP G  G  GEKG+ GPPGP G  G+RG PG  G+ G  G  G  GP G  G  G  G+ G+ G  G  G PG  G SG  G
Sbjct:  701 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 873

[Close]

BLAST of Fibrillar collagen vs. Ensembl Human
Match: COL5A2 (collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210])

HSP 1 Score: 128.257 bits (321), Expect = 4.431e-29
Identity = 72/225 (32.00%), Postives = 106/225 (47.11%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQ------------------QMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDIILDSSDQI-FSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            + +  P G+   PAR+C  L   + +   G YWIDPN G ++DA++VYC ++  +TCI      +     K  W S+S DNK + Y LD                    QMTFL+++S +ASQ IT  C+N         KN  K + +   ND+ + +   I F Y VL+D C   + ++  T  E  T    RLPI  I++  V+V     +    I  VCF 
Sbjct:  893 ETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETGETCISANPSSVPR---KTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPI--IDLAPVDVGGTDQEFGVEIGPVCFV 1112

HSP 2 Score: 65.855 bits (159), Expect = 5.843e-10
Identity = 78/184 (42.39%), Postives = 98/184 (53.26%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLG------AMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP------DGKPGTNGLSGKDG 1964
            G  G++G+PG +G      A G PG  G+ G  G RG +G  GP G+ G+PG+ GE G  G +G  G  G PG VG+ G PG  G  G  G  G +G        GE+G  G  GP G QG  G+PG  G PG +G  G  G +G  G LGP G PG++G PGP       G+PG+ GL G  G
Sbjct:   57 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQ------GERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG 234

HSP 3 Score: 62.003 bits (149), Expect = 9.296e-9
Identity = 84/218 (38.53%), Postives = 106/218 (48.62%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLG------SQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGP---------------------------------LGPQG------SRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G  G+ G+PG  GA G  G  GV G +G  G  G PG +G+ G PG+IG  GQ G +G      S G+ G PG  G+ G PG  G  G  G  G  GP G PG  GE+G+ GPPGP                                 LGP+G       RG+PG+ G PG++G  G  GP+G  G+ GP+G PG  G PG  G PG  G++G  G
Sbjct:  170 QGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPG 387

HSP 4 Score: 59.3066 bits (142), Expect = 6.397e-8
Identity = 79/182 (43.41%), Postives = 98/182 (53.85%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNG---QDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGK------PGTNGLSGKDG 1964
            RG +G  G+ G  G  G PG +G++G  GP G +G PGP+G     G PG  G  G+RG  G+ G  G  G +G+ G  G AG  G  G  G  GP G  G  GEKG+ GP G +GP GSRG PG  G+ G  G+ G  GP+G      P GQPG +G PG  G+      PG  GL+G  G
Sbjct:  323 RGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQG------PDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 498

HSP 5 Score: 56.9954 bits (136), Expect = 3.111e-7
Identity = 68/176 (38.64%), Postives = 77/176 (43.75%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQG---ETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  G  GDPG++G  GP G +G  G  G  G  G PGP G  G  G +G  G +G  G  G   E GLPG  G                             G  G  GP G LGP G+ G+ G  G PG  G  G+ G  GL G  G +G PGK G  G  G PG  G  GKDGE
Sbjct:  114 GPTGPMGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARG---------------------------LTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGE 262

HSP 6 Score: 55.4546 bits (132), Expect = 9.340e-7
Identity = 87/183 (47.54%), Postives = 101/183 (55.19%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQG---VSGRDGPRGERGYPGPNG---QDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQ---PGKEGTPGPDGKPGTNGLSGKDGE 1967
             G KG+ G PGS G  GP G  G     G  GP GERG PG  G    DG PG  G  G+RG +GS G  G  G+ G PG+PG  G  G  G  G +GP G  G LG  G++G PGP G  G RG+PG +G PG +GS G  G  G  GN G  GQ   PGK+G  GP G  G  GL+G+ GE
Sbjct:   98 EGPKGEVGAPGSKGEAGPTGPMGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGE 280

[Close]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58])

HSP 1 Score: 62.3882 bits (150), Expect = 2.426e-9
Identity = 61/173 (35.26%), Postives = 84/173 (48.55%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGL---VGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            +G KG DG  G+ G  G  G +G  G DGP+G++G  G  G +G+PGA G+ G++G  G++G  G PG  GD                              KG+ G  GP G +G+ G PG  G  G++G++G  G +G     G+ G  G  G +GTPG  G  G  GL G
Sbjct:  324 KGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGD------------------------------KGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDG 466

HSP 2 Score: 60.077 bits (144), Expect = 1.089e-8
Identity = 67/179 (37.43%), Postives = 87/179 (48.60%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLG---AMGPPGRQGVSGRDGPRGERGYPGPNGQ---DGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG DG PGS G   A G  G  G  G+ G +GE+G  GP G    DG+PGA G+ G++G  G++G  G PG+ GD                              KGD G  GP G +G+ G PG  G  G++G  G+ G +G  G  G  GQPG++G    DG+PG  G  G  G+
Sbjct:  427 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGD------------------------------KGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQ---DGQPGQKGDKGDKGQ 572

HSP 3 Score: 58.151 bits (139), Expect = 4.528e-8
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            +G KG+ G  GS G+ G  G +G  G  GP+G++G  G  G DG+PG+ G+   +G  G++G  G PG+ GD G  G  G  G  G +G  G  G+ G+ GEKG +G  G  G  GS+G  G  G  G  G+ G+ G +G  G  GP G  G +GTPG  G  G  G  G
Sbjct:  165 KGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGD---KGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADG 331

HSP 4 Score: 56.9954 bits (136), Expect = 1.090e-7
Identity = 66/191 (34.55%), Postives = 89/191 (46.60%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS------QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGK---------------EGTPGPDGKPGTNGLSG 1955
            +G KG DG+PG  G  G  G +G  G  G +G++G  G  G DG+PG+ G+ G +G+ GS      +G  G PG+ GD G+ G                       G KG +G PG  G +G+ G  G  G PGQ+G +G+ G +G  G+ G  G PG                +GTPG  G  G  GL G
Sbjct:  183 KGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGAD---------------------GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDG 352

HSP 5 Score: 55.0694 bits (131), Expect = 4.410e-7
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGY---PGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGP------QGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPG 1937
            +G KG DG  G+ G  G  G +G  G DGP+G++G    PG  G  G  G IG+ GQ+G  G +G+ G PG  G                +  +         GEKG +G PG  G       +G +G+ G +G+PGQ+G +G  G +G  G  G  GQPG++G    DG+PG
Sbjct:  483 KGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKG-------------QDGQPGQKGDKGDKGQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQKGQ---DGQPG 639

[Close]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58])

HSP 1 Score: 60.4622 bits (145), Expect = 7.590e-9
Identity = 67/179 (37.43%), Postives = 87/179 (48.60%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLG---AMGPPGRQGVSGRDGPRGERGYPGPNGQ---DGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG DG PGS G   A G  G  G  G+ G +GE+G  GP G    DG+PGA G+ G++G  G++G  G PG+ GD                              KGD G  GP G +G+ G PG  G  G++G  G+ G +G  G  G  GQPG++G    DG+PG  G  G  G+
Sbjct:  331 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGD------------------------------KGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQ---DGQPGQKGDKGDKGQ 476

HSP 2 Score: 60.077 bits (144), Expect = 9.649e-9
Identity = 66/172 (38.37%), Postives = 90/172 (52.33%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGL---VGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            G KG  G  G+ GA G PG +G +G  G +G  G  G  G +G+PG+ G+ G++G  G++G  G PG+ GD G  G  G  G PG              G+KG+ G  GP G +G+ G PG  G  G++G++G  G +G     G+ G  G  G +GTPG  G  G  GL G
Sbjct:  211 GSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQ------------KGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDG 370

HSP 3 Score: 59.3066 bits (142), Expect = 1.883e-8
Identity = 72/185 (38.92%), Postives = 96/185 (51.89%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXX---XXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQP---------GKEGTPGPDGKPGTNGLSGKDG 1964
            +G KG+ G  GS G+ G  G +G  G  GP+G++G  G  G DG+PG+ G+ G  G  G+ G  G  G+ GD G+ G  G  G  G     G +G  G  G  G KG +G PG  G +G+ G  G  G PGQ+G +G+ G +G  G+ G  G P         G +G  G DG PG+ G  G DG
Sbjct:  165 KGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADG 349

HSP 4 Score: 55.0694 bits (131), Expect = 3.291e-7
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERG---YPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGP------QGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPG 1937
            +G KG DG  G+ G  G  G +G  G DGP+G++G    PG  G  G  G IG+ GQ+G  G +G+ G PG  G                +  +         GEKG +G PG  G       +G +G+ G +G+PGQ+G +G  G +G  G  G  GQPG++G    DG+PG
Sbjct:  387 KGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKG-------------QDGQPGQKGDKGDKGQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQKGQ---DGQPG 543

[Close]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Match: col-60 (COLlagen [Source:UniProtKB/TrEMBL;Acc:Q19725])

HSP 1 Score: 58.151 bits (139), Expect = 1.922e-8
Identity = 64/175 (36.57%), Postives = 81/175 (46.29%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGK---PGTNGLSGKDG 1964
            G +G DG PG  G  G PG  G SG +GP G RG PG  G+DG+PG  G  G+ G+ G++G                                     +G+ G  G PG  GP+G RG+PG +G+PG+             G+ GPAGQPG +G  GPDG    PG  GL G D 
Sbjct:  146 GEQGPDGAPGEAGRDGQPGSDGQSGNEGPTGPRGSPGNKGRDGNPGRDGSPGRPGRDGTRG-------------------------------------VGQPGSPGQPGSRGPEGPRGQPGNMGRPGE------------YGDAGPAGQPGNDGEQGPDGVVGIPGEPGLPGSDA 271

[Close]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Match: emb-9 (Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139])

HSP 1 Score: 55.0694 bits (131), Expect = 5.303e-7
Identity = 78/195 (40.00%), Postives = 91/195 (46.67%), Query Frame = 3

Query: 1446 RGLKGKDGD---PGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPL-------GPQGSRGKPGVVGK---PGQQGSEGKLGPEGLVGNLGPAGQPGKEGTP--------GPDGKPGTNGLSGKDGE 1967
            +G KG+DG    PG LG  GPPG  G+ G+ G  G+ G  G  G+DG PG  GE G +G+ G  G  G PG  G                    G  G PG  G +GD GP GPL       GP G++G  GV G    PG  G  G +GP G VG  G  GQPG +G P        G DG PG  G  G  GE
Sbjct:  266 KGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKG------------------GAGEPGYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGE 442

[Close]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Match: emb-9 (Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139])

HSP 1 Score: 55.0694 bits (131), Expect = 5.814e-7
Identity = 78/195 (40.00%), Postives = 92/195 (47.18%), Query Frame = 3

Query: 1446 RGLKGKDGD---PGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPL-------GPQGSRGKPGVVGK---PGQQGSEGKLGPEGLVGNLGPAGQPGKEGTP--------GPDGKPGTNGLSGKDGE 1967
            +G KG+DG    PG LG  GPPG  G+ G+ G  G+ G  G  G+DG PG  GE G +G+ G  G  G PG  G  G+PG  G                    G +GD GP GPL       GP G++G  GV G    PG  G  G +GP G VG  G  GQPG +G P        G DG PG  G  G  GE
Sbjct:  266 KGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRP------------------GFEGDCGPEGPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGE 442

[Close]

BLAST of Fibrillar collagen vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079003)

HSP 1 Score: 61.2326 bits (147), Expect = 8.994e-9
Identity = 77/178 (43.26%), Postives = 96/178 (53.93%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS-----QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G+ G  G  GP    GV+G  G RG +G PG +G +G PGA G+IG RG++G      +GE GLPG  G        G  G  G  G  G  G PG  GE G  G PGP+GP GS+G+ G+ G PGQ G +G  G  GL G+ GP G  G+ G  G +G+ G  G  G  G
Sbjct: 1234 RGYTGEKGEQGERGLTGP---AGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPG------RNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQG 1402

HSP 2 Score: 55.4546 bits (132), Expect = 4.808e-7
Identity = 82/193 (42.49%), Postives = 97/193 (50.26%), Query Frame = 3

Query: 1455 KGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXX--------XXLGEKGDNGPPGPL------------GPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPD---GKPGTNGLSGKDG 1964
            KG  G+PG  G  GPPG  G  G  G  G +G  GP G  G  G  G  G RG+ G+QG  G+PGN G  G  G  G  G PGPRG+ G +           G  GEKGD GP GP+            G +G  G PGV G+PG  G +G +GP G  G  GP G PG +G  G D   G+PG+ GL G  G
Sbjct:  761 KGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPG 953

HSP 3 Score: 54.299 bits (129), Expect = 1.185e-6
Identity = 67/181 (37.02%), Postives = 82/181 (45.30%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGA--------MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG+ G++G PG  G         MGPPG  G+ G    +G+RG  GP G  G+ G++G  G RG  G  G +G PG VG                              EKGD GP GP G  G  G PG+ G  G+ G++G+ G  GLVG  G  G  G  G  GP G  G  G  GK G
Sbjct:  833 RGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGE---KGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVG------------------------------EKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRG 980

HSP 4 Score: 53.5286 bits (127), Expect = 2.155e-6
Identity = 78/181 (43.09%), Postives = 95/181 (52.49%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVV--------GKPGQQGSEGKLGPEGLVGNL---GPAGQPGKEGTPGPDGKPGTNGLSG 1955
            +G  G  G PG  G  GP G QG +G  GP+GERG     GQ G P  + +I  RG  GSQGE G  G  G+ G+ G  GP G  G +G RG  G PG  G  G  G  G +GP+G  G PGV         G+PG+ G +G +G  GL+G     G AG+PG  G PGP G  G+ G  G
Sbjct: 1176 KGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGI---RGQPGLPATVPDI--RGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERG 1351

HSP 5 Score: 51.6026 bits (122), Expect = 7.254e-6
Identity = 75/195 (38.46%), Postives = 94/195 (48.21%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRG-------------KPGVVGKPGQQG----------SEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            GL G+ G PG  G  G PG  G++G+DG  G+ G PG  G  G PG  G  GQ   LGS+GE G P         G  G  G  G  G  GP G PG  GE+GD+GP G  GP+G  G             KPG  G  G++G          +   +GP G +G  G  G  G++G PGP+G  G +G  G+ G
Sbjct:  140 GLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQ---LGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKG 331

HSP 6 Score: 51.6026 bits (122), Expect = 8.094e-6
Identity = 69/177 (38.98%), Postives = 79/177 (44.63%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---DGKPGTNGLSGKDGE 1967
            RGL G  G+PG +G  GP    G +G  G RG  G PG  GQDG PGA G  G  G  G +GE GL G  G                              +KGD         +G RG  G  G PG  G +G  G  GL GN GP G PG+ G  GP   DG+ GT GL G+ GE
Sbjct: 1323 RGLPGLAGEPGLVGLPGP---IGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEG------------------------------QKGD---------KGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGE 1457

[Close]

BLAST of Fibrillar collagen vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079002)

HSP 1 Score: 61.2326 bits (147), Expect = 8.994e-9
Identity = 77/178 (43.26%), Postives = 96/178 (53.93%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS-----QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G+ G  G  GP    GV+G  G RG +G PG +G +G PGA G+IG RG++G      +GE GLPG  G        G  G  G  G  G  G PG  GE G  G PGP+GP GS+G+ G+ G PGQ G +G  G  GL G+ GP G  G+ G  G +G+ G  G  G  G
Sbjct: 1234 RGYTGEKGEQGERGLTGP---AGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPG------RNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQG 1402

HSP 2 Score: 55.4546 bits (132), Expect = 4.808e-7
Identity = 82/193 (42.49%), Postives = 97/193 (50.26%), Query Frame = 3

Query: 1455 KGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXX--------XXLGEKGDNGPPGPL------------GPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPD---GKPGTNGLSGKDG 1964
            KG  G+PG  G  GPPG  G  G  G  G +G  GP G  G  G  G  G RG+ G+QG  G+PGN G  G  G  G  G PGPRG+ G +           G  GEKGD GP GP+            G +G  G PGV G+PG  G +G +GP G  G  GP G PG +G  G D   G+PG+ GL G  G
Sbjct:  761 KGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPG 953

HSP 3 Score: 54.299 bits (129), Expect = 1.185e-6
Identity = 67/181 (37.02%), Postives = 82/181 (45.30%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGA--------MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG+ G++G PG  G         MGPPG  G+ G    +G+RG  GP G  G+ G++G  G RG  G  G +G PG VG                              EKGD GP GP G  G  G PG+ G  G+ G++G+ G  GLVG  G  G  G  G  GP G  G  G  GK G
Sbjct:  833 RGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGE---KGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVG------------------------------EKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRG 980

HSP 4 Score: 53.5286 bits (127), Expect = 2.155e-6
Identity = 78/181 (43.09%), Postives = 95/181 (52.49%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVV--------GKPGQQGSEGKLGPEGLVGNL---GPAGQPGKEGTPGPDGKPGTNGLSG 1955
            +G  G  G PG  G  GP G QG +G  GP+GERG     GQ G P  + +I  RG  GSQGE G  G  G+ G+ G  GP G  G +G RG  G PG  G  G  G  G +GP+G  G PGV         G+PG+ G +G +G  GL+G     G AG+PG  G PGP G  G+ G  G
Sbjct: 1176 KGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGI---RGQPGLPATVPDI--RGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERG 1351

HSP 5 Score: 51.6026 bits (122), Expect = 7.254e-6
Identity = 75/195 (38.46%), Postives = 94/195 (48.21%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRG-------------KPGVVGKPGQQG----------SEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            GL G+ G PG  G  G PG  G++G+DG  G+ G PG  G  G PG  G  GQ   LGS+GE G P         G  G  G  G  G  GP G PG  GE+GD+GP G  GP+G  G             KPG  G  G++G          +   +GP G +G  G  G  G++G PGP+G  G +G  G+ G
Sbjct:  140 GLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQ---LGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKG 331

HSP 6 Score: 51.6026 bits (122), Expect = 8.094e-6
Identity = 69/177 (38.98%), Postives = 79/177 (44.63%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---DGKPGTNGLSGKDGE 1967
            RGL G  G+PG +G  GP    G +G  G RG  G PG  GQDG PGA G  G  G  G +GE GL G  G                              +KGD         +G RG  G  G PG  G +G  G  GL GN GP G PG+ G  GP   DG+ GT GL G+ GE
Sbjct: 1323 RGLPGLAGEPGLVGLPGP---IGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEG------------------------------QKGD---------KGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGE 1457

[Close]

BLAST of Fibrillar collagen vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079001)

HSP 1 Score: 61.2326 bits (147), Expect = 8.994e-9
Identity = 77/178 (43.26%), Postives = 96/178 (53.93%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS-----QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G+ G  G  GP    GV+G  G RG +G PG +G +G PGA G+IG RG++G      +GE GLPG  G        G  G  G  G  G  G PG  GE G  G PGP+GP GS+G+ G+ G PGQ G +G  G  GL G+ GP G  G+ G  G +G+ G  G  G  G
Sbjct: 1234 RGYTGEKGEQGERGLTGP---AGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPG------RNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQG 1402

HSP 2 Score: 55.4546 bits (132), Expect = 4.808e-7
Identity = 82/193 (42.49%), Postives = 97/193 (50.26%), Query Frame = 3

Query: 1455 KGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXX--------XXLGEKGDNGPPGPL------------GPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPD---GKPGTNGLSGKDG 1964
            KG  G+PG  G  GPPG  G  G  G  G +G  GP G  G  G  G  G RG+ G+QG  G+PGN G  G  G  G  G PGPRG+ G +           G  GEKGD GP GP+            G +G  G PGV G+PG  G +G +GP G  G  GP G PG +G  G D   G+PG+ GL G  G
Sbjct:  761 KGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPG 953

HSP 3 Score: 54.299 bits (129), Expect = 1.185e-6
Identity = 67/181 (37.02%), Postives = 82/181 (45.30%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGA--------MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG+ G++G PG  G         MGPPG  G+ G    +G+RG  GP G  G+ G++G  G RG  G  G +G PG VG                              EKGD GP GP G  G  G PG+ G  G+ G++G+ G  GLVG  G  G  G  G  GP G  G  G  GK G
Sbjct:  833 RGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGE---KGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVG------------------------------EKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRG 980

HSP 4 Score: 53.5286 bits (127), Expect = 2.155e-6
Identity = 78/181 (43.09%), Postives = 95/181 (52.49%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVV--------GKPGQQGSEGKLGPEGLVGNL---GPAGQPGKEGTPGPDGKPGTNGLSG 1955
            +G  G  G PG  G  GP G QG +G  GP+GERG     GQ G P  + +I  RG  GSQGE G  G  G+ G+ G  GP G  G +G RG  G PG  G  G  G  G +GP+G  G PGV         G+PG+ G +G +G  GL+G     G AG+PG  G PGP G  G+ G  G
Sbjct: 1176 KGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGI---RGQPGLPATVPDI--RGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERG 1351

HSP 5 Score: 51.6026 bits (122), Expect = 7.254e-6
Identity = 75/195 (38.46%), Postives = 94/195 (48.21%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRG-------------KPGVVGKPGQQG----------SEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            GL G+ G PG  G  G PG  G++G+DG  G+ G PG  G  G PG  G  GQ   LGS+GE G P         G  G  G  G  G  GP G PG  GE+GD+GP G  GP+G  G             KPG  G  G++G          +   +GP G +G  G  G  G++G PGP+G  G +G  G+ G
Sbjct:  140 GLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQ---LGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKG 331

HSP 6 Score: 51.6026 bits (122), Expect = 8.094e-6
Identity = 69/177 (38.98%), Postives = 79/177 (44.63%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---DGKPGTNGLSGKDGE 1967
            RGL G  G+PG +G  GP    G +G  G RG  G PG  GQDG PGA G  G  G  G +GE GL G  G                              +KGD         +G RG  G  G PG  G +G  G  GL GN GP G PG+ G  GP   DG+ GT GL G+ GE
Sbjct: 1323 RGLPGLAGEPGLVGLPGP---IGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEG------------------------------QKGD---------KGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGE 1457

[Close]

BLAST of Fibrillar collagen vs. Ensembl Fly
Match: vkg (gene:FBgn0016075 transcript:FBtr0333541)

HSP 1 Score: 54.299 bits (129), Expect = 1.101e-6
Identity = 82/217 (37.79%), Postives = 108/217 (49.77%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKL---------------GSQGETGLPGN--------VGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSR------------------GKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTP---GPDGKPGTNGLSGKDGE 1967
            GL G+DG+PG  G +G  G++GV G++  +GE G PG +G  G PG +G  GQ G                 G+ G+TGLPGN        VG PG  G  G  G   P G +G  G  G+LG+ G NG  G +G  G R                  G PG++G+ G++G  G  G +G +G  GP G+ G +G     GPDG PG NGL G+ GE
Sbjct:  784 GLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGE 1000

HSP 2 Score: 53.9138 bits (128), Expect = 1.517e-6
Identity = 63/155 (40.65%), Postives = 76/155 (49.03%), Query Frame = 3

Query: 1503 GRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            GRQ   G  G +GE G  G NGQ+G+ G+IG  G+RG LG+ G  GLPG+ G                 G  G  G  G  GE G NG  G +GP+G  G+ G  G  G  G +G  G  GL G  G  G PG  G PG  G    +G+ G DGE
Sbjct:  888 GRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPG---------------IPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGE 1027

HSP 3 Score: 53.1434 bits (126), Expect = 2.536e-6
Identity = 64/181 (35.36%), Postives = 81/181 (44.75%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETG--LPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPG------QQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G +G DGD G  G  G P    +    G  GE GY GP G  G+ G  G IG RG++G +G  G  +PG VG                               KG  GP G  G QG+ G PG  G+PG       +G  G  G E + G +GP G+ G +G PG  G PG  GL+G+ G
Sbjct:  694 KGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVG------------------------------AKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPG 844

[Close]

BLAST of Fibrillar collagen vs. Ensembl Fly
Match: vkg (gene:FBgn0016075 transcript:FBtr0079036)

HSP 1 Score: 54.299 bits (129), Expect = 1.101e-6
Identity = 82/217 (37.79%), Postives = 108/217 (49.77%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKL---------------GSQGETGLPGN--------VGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSR------------------GKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTP---GPDGKPGTNGLSGKDGE 1967
            GL G+DG+PG  G +G  G++GV G++  +GE G PG +G  G PG +G  GQ G                 G+ G+TGLPGN        VG PG  G  G  G   P G +G  G  G+LG+ G NG  G +G  G R                  G PG++G+ G++G  G  G +G +G  GP G+ G +G     GPDG PG NGL G+ GE
Sbjct:  784 GLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGE 1000

HSP 2 Score: 53.9138 bits (128), Expect = 1.517e-6
Identity = 63/155 (40.65%), Postives = 76/155 (49.03%), Query Frame = 3

Query: 1503 GRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            GRQ   G  G +GE G  G NGQ+G+ G+IG  G+RG LG+ G  GLPG+ G                 G  G  G  G  GE G NG  G +GP+G  G+ G  G  G  G +G  G  GL G  G  G PG  G PG  G    +G+ G DGE
Sbjct:  888 GRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPG---------------IPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGE 1027

HSP 3 Score: 53.1434 bits (126), Expect = 2.536e-6
Identity = 64/181 (35.36%), Postives = 81/181 (44.75%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETG--LPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPG------QQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G +G DGD G  G  G P    +    G  GE GY GP G  G+ G  G IG RG++G +G  G  +PG VG                               KG  GP G  G QG+ G PG  G+PG       +G  G  G E + G +GP G+ G +G PG  G PG  GL+G+ G
Sbjct:  694 KGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVG------------------------------AKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPG 844

[Close]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Match: col1a2 (collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415])

HSP 1 Score: 140.584 bits (353), Expect = 6.998e-33
Identity = 120/371 (32.35%), Postives = 169/371 (45.55%), Query Frame = 3

Query: 3225 GEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPG------PNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDG-AQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDP-LIAKYLGNDAISK-----------PLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI-------QLQKPKFNWFSQS---------NDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            G  GAPG  GPRG+KG  GE G  G +G++G PG      PNG  G SGP G +G  GP G  G  G  G  G  G  G +G  G  G A        P  P  P  P       +   GY   +AD   L AK    DA  K           P G+  +PAR+C  +   +P +  G YWIDPN G   DA++ +C     +TCI P    I         Q+ K  WF ++         ND      S+   Q+ F+++++N+A Q IT +C+N          N  K + +   ND+ L +  +  F++ VLED C  ++   S T +E  T++P+RLPI DI    +++     +   +I  VCF
Sbjct:  984 GARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDGSNGMPGAIGPPGHRGPAGHVGPAGPPGSPGLPGPPGPSGGGYDTSGGYDEYRADQASLRAKDYEVDATIKSLNTQIENLLSPEGSKKNPARTCRDIRLSHPEWSSGFYWIDPNQGCTMDAIKAFCDFSTGQTCIHPHPESIPRKNWYRSSQEKKHTWFGETINSGTEFAYNDETLSPQSM-ATQLAFMRLLANQAVQNITYHCKNSIAYMDAENGNLKKAVLLQGSNDVELRAEGNSRFTFSVLEDGCSRHTGQWSKTVIEYRTNKPSRLPILDIA--PLDIGGADQEFGLDIGPVCF 1351

HSP 2 Score: 56.9954 bits (136), Expect = 2.052e-7
Identity = 68/187 (36.36%), Postives = 82/187 (43.85%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGS---------------RGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G +G+ G  GS G  GPPGR G +G  G RGE G PG  G  G+PG  G  G  G+ G++GE+G  G  G                            +G  G  G PGP GP+G                RG PG+ G PG  G  G  GP G+ G  GP G  G     GP GK G+NG+ G  G
Sbjct:  909 GPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGAVGRPGNRGESGPSGPTG---------------------------AVGPAGARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPN---GPAGKDGSNGMPGAIG 1065

HSP 3 Score: 55.8398 bits (133), Expect = 4.655e-7
Identity = 82/196 (41.84%), Postives = 95/196 (48.47%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIG---------------------QRGKLGSQGETGLPGNVGDXXX---XXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G+ G PG  G +GP G  G +G+DGPRG RG  GP G  G  G IG +G                      +G+LGSQG  GLPG+ GD G    PG  G  G  GP G  G  G  GN+G  G  GP G  G +GS G  G  G+PG  G +G  G  G  G  GP G PG  G  G  G+PG  G SG  G
Sbjct:  780 GAPGRVGPPGPAGIVGPAGLTGPAGKDGPRGPRGDVGPAGPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGPQGQLGSQGFNGLPGSRGDRGLPGIPGSVGEPGRVGPAGAPGARGPGGNIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGAVGRPGNRGESGPSG 975

[Close]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Match: col2a1b (collagen, type II, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050302-9])

HSP 1 Score: 137.887 bits (346), Expect = 4.039e-32
Identity = 73/225 (32.44%), Postives = 112/225 (49.78%), Query Frame = 3

Query: 3621 ISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWF-SQSNDNKFISY-------------------SLDQQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            I +P GT  SPAR+C  L + +P +  G YWIDPN G   DA++V+C ++  ++CI P    I    P+ NW+ ++  D K I +                   +    QMTFL+++S +ASQ +T +CRN          N  K L +   ND+ I    +  F+Y VLED C+ ++   S T +E  S+ T RLP+ DI    V++     +   ++  VCF 
Sbjct: 1126 IRRPDGTKKSPARTCRDLKQCHPDWKSGEYWIDPNQGCTVDAIKVFCNMETGESCIYPKPANI----PRKNWWTTKGGDRKHIWFGEAMNGGFHFNYGDENLSPNTASIQMTFLRLLSTEASQNLTYHCRNSIAYMDESSGNLKKALLLRGSNDVEIRAEGNSRFTYSVLEDGCKKHTGQWSKTVIEYKSQKTSRLPLVDIA--PVDIGGAHQEFGVDVGAVCFL 1344

HSP 2 Score: 58.9214 bits (141), Expect = 4.919e-8
Identity = 78/166 (46.99%), Postives = 90/166 (54.22%), Query Frame = 3

Query: 1476 GSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            GS G  G PG +G +G  G RG  G  GP G+ G PGA G  G  G  GS G  G  G+VG PG  G  G  GP GP G +G TG  G  G+ GD+G  G     GP+G  G  G+ G PG  G EGK GP G  G  GP G  G+ GTPG  G PG +GL+G  G
Sbjct:  220 GSPGFPGSPGAKGEAGPTGARGPEGAQGPRGESGVPGASGPSGVSGNPGSDGMPGAKGSVGAPGIGGAPGFPGPRGPPGPQGATGPLGPKGQSGDSGLAGFKGEAGPKGEIGNAGLQGAPGPAGEEGKRGPRGEPGAAGPPGPTGERGTPGNRGFPGQDGLAGPKG 385

HSP 3 Score: 52.7582 bits (125), Expect = 3.936e-6
Identity = 56/156 (35.90%), Postives = 68/156 (43.59%), Query Frame = 3

Query: 1500 PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            PG +G +G  G +G RG PG  G DG  G +G  G  G  G  G  G+PG                                 E+G +G PGP G +G  G  G  G PG+ GS G  GP G  G  GP G+ G+ G  GP G  GT G+ G  GE
Sbjct:  561 PGERGGAGPQGLQGPRGLPGTPGTDGPKGGVGPAGTAGAQGPPGLQGMPG---------------------------------ERGTSGNPGPKGDRGDNGDKGPEGAPGKDGSRGLTGPIGPTGPAGPNGEKGESGPAGPSGVAGTRGVPGDRGE 683

HSP 4 Score: 51.6026 bits (122), Expect = 9.234e-6
Identity = 82/197 (41.62%), Postives = 96/197 (48.73%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGD------NGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGN------------------------LGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G PG  G  G PG QG +G  GP+G RG  GP G  G PGA G +G  G  G+ G  G  G  G  G  G  G  GPPG  G  G  G+ G  GEKGD      +GP GP GPQG  G+ G+VG PGQ+G  G  G  G  G                          G AG+PG+EG PG DG PG +G +G  G+
Sbjct:  718 GAPGPQGPSGAPGPQGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRPGDAGLRGSAGPAGEKGDPGEDGPHGPDGPAGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGPGDRGPPGPVGAPGLTGAAGEPGREGNPGSDGPPGRDGSAGIKGD 914

[Close]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Match: col2a1a (collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192])

HSP 1 Score: 136.732 bits (343), Expect = 8.687e-32
Identity = 75/249 (30.12%), Postives = 123/249 (49.40%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI--------QLQKPKFNWFSQSNDNKF-ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A+ S RQ     ++ D  L +     + I  P G+  +PARSC  L   +P +  G YW+DPN G   DA++V+C ++  +TC+KP   KI        + +  K  WF +S +  F  SY+   Q       Q+ FL+++S +A+Q IT +C+N     +       K + +   ND+ I    +  F+Y VLED C+ ++   + T +E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1178 ASSSLRQH---DVEVDATLKSINGQIEDIRSPDGSRKNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNMETGETCVKPSTPKIPRKNWWTSKSKAQKHVWFGESMNGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAILLQGSNDVEIRAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLPIMDIA--PMDIGGADQEFGVDIGAVCFL 1421

HSP 2 Score: 52.7582 bits (125), Expect = 4.146e-6
Identity = 81/172 (47.09%), Postives = 90/172 (52.33%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------PLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G PGS G  GP G +G  G  GPRGE G PG      SPG  G        G+ G  G+PG  G  G  G AG  G PGPRG  GP G  G LG KG +G PG        GP+G RG  G  G PG  G EGK GP G  G+ GP G PG+ G PG  G PG +GL+G  G
Sbjct:  303 GSPGSKGEAGPTGARGPEGAQGPRGEAGTPG------SPGPAG------ASGNPGTDGIPGAKGSAGASGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGIPGFKGEAGPKGERGVLGPQGPPGPSGEEGKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKG 462

HSP 3 Score: 52.7582 bits (125), Expect = 4.436e-6
Identity = 79/196 (40.31%), Postives = 94/196 (47.96%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGP------------PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKG---DNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK------------LGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            G +G  GD G +GA GP            PG +G  G  G +G+ G PGP G  G+PG +G  G  G  G++G  G PG  G PG  G  GP GP G  G  GP G  G  G KG   D GPPG  G  G RG PG  G+ G+ G +G              G  G+VG  G  G+ G  G PGP G+PG  G  G
Sbjct:  750 GARGAPGDRGEIGAPGPAGFAGPPGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTGVTGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGAAGPAGPSGKDGPKGVRGDAGPPGRAGDAGLRGPPGAPGEKGEAGEDGPPGPDGPSGPAGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 945

[Close]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Match: col2a1a (collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192])

HSP 1 Score: 134.806 bits (338), Expect = 4.503e-31
Identity = 75/249 (30.12%), Postives = 123/249 (49.40%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI--------QLQKPKFNWFSQSNDNKF-ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A+ S RQ     ++ D  L +     + I  P G+  +PARSC  L   +P +  G YW+DPN G   DA++V+C ++  +TC+KP   KI        + +  K  WF +S +  F  SY+   Q       Q+ FL+++S +A+Q IT +C+N     +       K + +   ND+ I    +  F+Y VLED C+ ++   + T +E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1248 ASSSLRQH---DVEVDATLKSINGQIEDIRSPDGSRKNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNMETGETCVKPSTPKIPRKNWWTSKSKAQKHVWFGESMNGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAILLQGSNDVEIRAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLPIMDIA--PMDIGGADQEFGVDIGAVCFL 1491

HSP 2 Score: 54.299 bits (129), Expect = 1.638e-6
Identity = 79/196 (40.31%), Postives = 94/196 (47.96%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGP------------PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKG---DNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK------------LGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            G +G  GD G +GA GP            PG +G  G  G +G+ G PGP G  G+PG +G  G  G  G++G  G PG  G PG  G  GP GP G  G  GP G  G  G KG   D GPPG  G  G RG PG  G+ G+ G +G              G  G+VG  G  G+ G  G PGP G+PG  G  G
Sbjct:  820 GARGAPGDRGEIGAPGPAGFAGPPGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTGVTGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGAAGPAGPSGKDGPKGVRGDAGPPGRAGDAGLRGPPGAPGEKGEAGEDGPPGPDGPSGPAGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 1015

HSP 3 Score: 53.9138 bits (128), Expect = 1.738e-6
Identity = 81/172 (47.09%), Postives = 90/172 (52.33%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------PLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G PGS G  GP G +G  G  GPRGE G PG      SPG  G        G+ G  G+PG  G  G  G AG  G PGPRG  GP G  G LG KG +G PG        GP+G RG  G  G PG  G EGK GP G  G+ GP G PG+ G PG  G PG +GL+G  G
Sbjct:  373 GSPGSKGEAGPTGARGPEGAQGPRGEAGTPG------SPGPAG------ASGNPGTDGIPGAKGSAGASGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGIPGFKGEAGPKGERGVLGPQGPPGPSGEEGKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKG 532

HSP 4 Score: 53.1434 bits (126), Expect = 3.218e-6
Identity = 78/185 (42.16%), Postives = 96/185 (51.89%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKP------------GQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+DG     GA G PG +GV G  GP+G  G PG  G+ G PGA G  G+ G  G+QG+ G  G  G+ G+PGP GP+G  G  G  G  G  G  GE G  G  G +G  G RG PG  G+             G++G +G+ GP G  G  GP G PG+ G PG  G PG  G +G  G
Sbjct:  519 RGFPGQDG---LAGAKGAPGDRGVPGLSGPKGGTGDPGRPGEPGLPGARGLTGRPGDAGAQGKVGATGAPGEDGRPGPPGPLGARGQPGVMGFPGPKGANGEPGKPGEKGLVGRTGLRGLPGKDGETGPSGPPGPVGAVGERGEQGQPGPSGFQGLPGPTGAPGEPGKPGDQGVPGEGGAAGPTG 700

[Close]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Match: col2a1a (collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192])

HSP 1 Score: 133.265 bits (334), Expect = 1.085e-30
Identity = 75/249 (30.12%), Postives = 123/249 (49.40%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI--------QLQKPKFNWFSQSNDNKF-ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A+ S RQ     ++ D  L +     + I  P G+  +PARSC  L   +P +  G YW+DPN G   DA++V+C ++  +TC+KP   KI        + +  K  WF +S +  F  SY+   Q       Q+ FL+++S +A+Q IT +C+N     +       K + +   ND+ I    +  F+Y VLED C+ ++   + T +E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1110 ASSSLRQH---DVEVDATLKSINGQIEDIRSPDGSRKNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNMETGETCVKPSTPKIPRKNWWTSKSKAQKHVWFGESMNGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAILLQGSNDVEIRAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLPIMDIA--PMDIGGADQEFGVDIGAVCFL 1353

HSP 2 Score: 55.4546 bits (132), Expect = 5.606e-7
Identity = 76/180 (42.22%), Postives = 89/180 (49.44%), Query Frame = 3

Query: 1452 LKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK------------LGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            L+G DG PG+ G  G  G++G SG  GP+G  G PGP G  G     G  G RG  G+ G TG PG  G  G PGP G  G  GP G  G  G     G +GD GPPG  G  G RG PG  G+ G+ G +G              G  G+VG  G  G+ G  G PGP G+PG  G  G
Sbjct:  707 LQGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTG---VTGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGAAGPAGPSGKDGPK---GVRGDAGPPGRAGDAGLRGPPGAPGEKGEAGEDGPPGPDGPSGPAGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 880

HSP 3 Score: 54.6842 bits (130), Expect = 1.188e-6
Identity = 81/172 (47.09%), Postives = 90/172 (52.33%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------PLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G PGS G  GP G +G  G  GPRGE G PG      SPG  G  G      + G  G+PG  G  G  G AG  G PGPRG  GP G  G LG KG +G PG        GP+G RG  G  G PG  G EGK GP G  G+ GP G PG+ G PG  G PG +GL+G  G
Sbjct:  267 GSPGSKGEAGPTGARGPEGAQGPRGEAGTPG------SPGPAGASG------NPGTDGIPGAKGSAGASGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGIPGFKGEAGPKGERGVLGPQGPPGPSGEEGKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKG 426

[Close]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:NCBI gene;Acc:394828])

HSP 1 Score: 134.42 bits (337), Expect = 7.231e-31
Identity = 78/251 (31.08%), Postives = 122/251 (48.61%), Query Frame = 3

Query: 3543 MSNRQQGYMIIQADDPLIA--KYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI--------QLQKPKFNWFSQSNDNKF-ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            M   Q    + Q D  + A  K L N  ++I  P GT  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P   KI        + ++ K  WF ++ +  F  SY  D         QMTFL+++S  A+Q IT +C+N     +       K + +   ND+ I    +  F+Y  LED C+ ++   S T +E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1174 MRADQASSSVPQRDVDVEATLKSLNNQIESIRSPDGTKKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTVDAIKVFCNMETGETCVYPNPSKIPKKNWWSAKGKEKKHIWFGETINGGFQFSYGDDSSAPNTANIQMTFLRLLSTDATQNITYHCKNSIAFMDEASGNLKKAVLLQGSNDVEIRAEGNSRFTYNALEDGCKKHTGKWSKTVIEYRTQKTSRLPIVDIA--PMDIGGADQEFGVDIGPVCFL 1422

HSP 2 Score: 63.5438 bits (153), Expect = 3.174e-9
Identity = 78/179 (43.58%), Postives = 89/179 (49.72%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGP------EGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G  G  G  GP G  G  G DGP+G  G  GPNG  G PG  G  G+RG  G  G  G  G+ G+ G  G  G  G  G  G  GP G  G  GEKG++GP GP G  G+RG PG  G+ G  G  G  GP       GL G+ G +GQ G  G PGP G  G  G  G  G
Sbjct:  636 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTG 814

HSP 3 Score: 56.6102 bits (135), Expect = 3.935e-7
Identity = 86/197 (43.65%), Postives = 96/197 (48.73%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGN------------------------LGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG+ GDPG  G  G  G +G  G  GP+G    PGP G++G  GA GE G  G LG  GE G PGN G PGQ G AGP G PG RG  G        G KG NG PG  G  G  G  G+ G+PG  G +GK+GP G  G                          G  G+PGK G  G  G PG  GL GKDGE
Sbjct:  385 GPKGQTGDPGVAGFKGEHGPKGEIGSAGPQG---APGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLG------GPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGE 572

HSP 4 Score: 56.225 bits (134), Expect = 4.659e-7
Identity = 78/179 (43.58%), Postives = 94/179 (52.51%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQG------------VSGRDGPRGERGYPG---PNGQDGSPGAIGEIG---QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDG 1928
             G +G  G+PG+ G +GPPG +G            ++G  G  GERG PG   P G +G PG  GE G    RG  G  G+ G  G VG  G  G  G  GPPGP+G RG  G  G  G KG NG PG  G +G  G PG+ G PG+ G  G  GP G     GPAG+ G++G PGP G
Sbjct:  423 EGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPA---GPAGERGEQGPPGPSG 598

HSP 5 Score: 53.9138 bits (128), Expect = 2.673e-6
Identity = 73/178 (41.01%), Postives = 84/178 (47.19%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGT------------PGPDGKPGTNGLSGKDG 1964
            G PGS G  GP G +G  G  GPRGE G PG     G  GA G  G  G  G++G +G PG  G PG PGP GP GP G                       GPLGP+G  G PGV G  G+ G +G++G  G  G  GPAG+ GK G             PG  G PG  G  G+DG
Sbjct:  304 GAPGSKGEAGPTGARGPEGAQGPRGESGTPG---SPGPAGASGNPGTDGIPGAKGSSGAPGIAGAPGFPGPRGPPGPQGAT---------------------GPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDG 457

HSP 6 Score: 51.9878 bits (123), Expect = 9.011e-6
Identity = 78/206 (37.86%), Postives = 93/206 (45.15%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPR------------GERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQ---------------------GSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RGL G+ GD G  G +GP    G SG DG              G  G+PGP G +G PG  GE   +G LG+ G  GLPG  G+ G  GP GP GP                GE+G+ GPPGP G Q                     G  G PG+VG  G++G  G+ G  G  G  GP G PG  GT GP G  G +G +G  G
Sbjct:  495 RGLTGRPGDAGPQGKVGP---SGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGE---KGLLGAPGLRGLPGKDGETGAQGPNGPAGP---------------AGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQG 679

[Close]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Match: col1a2 (collagen type I alpha 2 [Source:NCBI gene;Acc:780175])

HSP 1 Score: 132.88 bits (333), Expect = 1.996e-30
Identity = 64/222 (28.83%), Postives = 110/222 (49.55%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP--------LVFKIQLQKPKFNWFSQS-NDNKFISYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            + I  P G+  +PAR+C  L   +P +  G YWIDPN G   D+++V+C     +TCI            +  + ++ K  WF ++ N    I Y+ +         Q  F+++++N ASQ IT +C+N          N  K + +   ND+ L +  +  F++ VLED C  ++ +   T +E  T++P+RLPI DI    +++  +  +   +I  VCF
Sbjct: 1134 ETILTPEGSKKNPARTCRDLRLSHPDWSSGFYWIDPNQGCTSDSIRVFCDFSTGETCIHANPDSIPQKNWYTSKTKQRKHVWFGETINGGTQIEYNEEGVTSKDMATQFAFMRLLANHASQNITYHCKNSIAYMDGQTGNLKKAILLQGSNDVELRAEGNSRFTFSVLEDGCTQHTGEWGRTVIEYRTNKPSRLPILDIA--PLDIGGDDQEFGLDIGPVCF 1353

HSP 2 Score: 69.3218 bits (168), Expect = 4.958e-11
Identity = 68/172 (39.53%), Postives = 82/172 (47.67%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G +G+ G  GS G  GPPG    +G  G +GERG  GP G+ GSPGA+G +G  G  G  G  G  G  GD                            G  G NG PGP G  G+ G  G+VG  G  G  GK GP G  G+ GP G+PG++G  GP G  G  G SG+ G
Sbjct:  703 GERGEAGPAGSTGFAGPPG---AAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDG---------------------------GAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESG 844

HSP 3 Score: 63.1586 bits (152), Expect = 3.876e-9
Identity = 79/183 (43.17%), Postives = 97/183 (53.01%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMG---PPGRQGVSGRDGPRGE------RGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G KG+ G PG+LGA+G   P G  G +G  GPRG+       G+PGP G+ G+PG  G +G  G  G  G+ G  G  GD G  G  G  G  GP+G  G  G+    GE G  GPPG  GP G  G  G+ G PG +G  G  G  G  G  GPAG  G  G+ GP G  G+ GL+G  GE
Sbjct:  735 KGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSS---GESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGE 914

HSP 4 Score: 61.2326 bits (147), Expect = 1.548e-8
Identity = 75/178 (42.13%), Postives = 86/178 (48.31%), Query Frame = 3

Query: 1452 LKGKDGDPG------SLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
             +G  GDPG        GA G PG  G SG  GP GE G  GPNG+ GS G  G  G RG  G++G  G  G  G              G  G RG +G  G  G  GD G PG  G  G+RG PG  G  G  G EG  GP+G+ G  GPAG  G  G PG  G PG  G +G+ G+
Sbjct:  332 ARGLSGDPGVAGGKGDTGAKGEPGSAGPSGPAGPSGEEGRRGPNGEAGSSGPAGNAGIRGVPGTRGLPGPDGRAG------------GMGAPGSRGASGPAGARGPNGDAGRPGEPGLLGARGLPGFSGSTGPAGKEGPAGPQGIEGRSGPAGASGPRGEPGSIGFPGPKGPAGEPGK 497

HSP 5 Score: 59.6918 bits (143), Expect = 4.302e-8
Identity = 77/170 (45.29%), Postives = 90/170 (52.94%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGK 1958
            G  G+ G PG  G +GP G  G  G+DGPRG RG  GP G+ G  G  G  G  G+ GS GE+G  G  G  G  G  G +G  G  G RG  G PG  G  G++GP GP G  GSRG  G VG PG  G  G+ G +G  GN GP G+ G  G  G  G PG  G +G 
Sbjct:  781 GPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGS 950

HSP 6 Score: 59.3066 bits (142), Expect = 6.398e-8
Identity = 81/184 (44.02%), Postives = 89/184 (48.37%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGP------------RGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G KG+ GD G  G  G PGR G  G  G             RGE G  GP+G  G  GA GE G+ G  GS G  G PG  G  G  G  GP GP G  G  G  G  G+ G  G NGP G  GP+G  G PG  G PG  G  G  GP G+VG  G  G PGK+G  GP G  G  G  G+ G
Sbjct:  643 GPKGEKGDAGHSGEYGNPGRDGARGPAGASGAPGPAGAAGDRGESGPAGPSGLAGPRGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQG 826

HSP 7 Score: 58.5362 bits (140), Expect = 9.842e-8
Identity = 80/194 (41.24%), Postives = 92/194 (47.42%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGER---------GYPGPNGQDGSPGAIGEIGQRGKL------------GSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEK---GDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            RGL G  G  G  G  GP G QG+ GR GP G           G+PGP G  G PG  G+ G +G              G+QG  GL GN GD G+ GPAG  G  G  G  G  G  G  GE+   GD GP GP GP+G RG P         G  G  GP G +G  GP G PG +G     G+PG  GL+G
Sbjct:  441 RGLPGFSGSTGPAGKEGPAGPQGIEGRSGPAGASGPRGEPGSIGFPGPKGPAGEPGKNGDKGSQGPSGNRGAPGPDGNNGAQGPPGLAGNTGDKGEQGPAGAPGFQGLPGPGGAAGELGKHGERGAPGDFGPAGPAGPRGERGAP---------GESGAAGPLGALGPRGPTGAPGSDGA---KGEPGAAGLNG 622

HSP 8 Score: 53.1434 bits (126), Expect = 4.472e-6
Identity = 81/183 (44.26%), Postives = 93/183 (50.82%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPG---AIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGK---PGVVGKPGQQGSEGKLGPEGLVGNLGPA---GQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +GL G+ G  G  G  GPPG  G SG  G  G  G PG  G+ G+PG   A GE G  G  GS G  G  G VG PG  G  G  G  G  G  GP G  G  G KG+ G PG  GP GS G    PG VG  G+ G+ G+ GP G  G +GPA   G  G++GT G  G+ G  G  G DG 
Sbjct:  831 QGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGSLGAVGAPGAVGPSGKSGNRGEPGPVGHAGAVGPAGPRGPSGQQGTRGDKGEAGERGARGLDGR 1013

HSP 9 Score: 52.7582 bits (125), Expect = 5.712e-6
Identity = 71/185 (38.38%), Postives = 86/185 (46.49%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNG------------QDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G  G LGA+GP G  G  G DG +GE G  G NG            + G+ G  G  G++G  G  GE G PG  G              GP G  G  G  G  G++G++GP GP G  G RG PG  G+ G  GS G  GP G  G+ G  G+ G +G  G  G PG  G  G  G
Sbjct:  582 RGAPGESGAAGPLGALGPRGPTGAPGSDGAKGEPGAAGLNGALGPSGPGGIPGERGAAGVPGPKGEKGDAGHSGEYGNPGRDG------------ARGPAGASGAPGPAGAAGDRGESGPAGPSGLAGPRGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHG 754

[Close]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:NCBI gene;Acc:394828])

HSP 1 Score: 132.109 bits (331), Expect = 3.680e-30
Identity = 80/255 (31.37%), Postives = 119/255 (46.67%), Query Frame = 3

Query: 3543 MSNRQQGYMIIQADDPLIA--KYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKF-------------ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            M   Q    + Q D  + A  K L N  ++I  P GT  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P   KI    PK NW+S     K               SY  D         QMTFL+++S  A+Q IT +C+N     +       K + +   ND+ I    +  F+Y  LED C+ ++   S T +E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1244 MRADQASSSVPQRDVDVEATLKSLNNQIESIRSPDGTKKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTVDAIKVFCNMETGETCVYPNPSKI----PKKNWWSAKGKEKKHIWFGETINGGFQFSYGDDSSAPNTANIQMTFLRLLSTDATQNITYHCKNSIAFMDEASGNLKKAVLLQGSNDVEIRAEGNSRFTYNALEDGCKKHTGKWSKTVIEYRTQKTSRLPIVDIA--PMDIGGADQEFGVDIGPVCFL 1492

HSP 2 Score: 64.3142 bits (155), Expect = 1.703e-9
Identity = 78/179 (43.58%), Postives = 89/179 (49.72%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGP------EGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G  G  G  GP G  G  G DGP+G  G  GPNG  G PG  G  G+RG  G  G  G  G+ G+ G  G  G  G  G  G  GP G  G  GEKG++GP GP G  G+RG PG  G+ G  G  G  GP       GL G+ G +GQ G  G PGP G  G  G  G  G
Sbjct:  706 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTG 884

HSP 3 Score: 57.3806 bits (137), Expect = 2.475e-7
Identity = 86/197 (43.65%), Postives = 96/197 (48.73%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGN------------------------LGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG+ GDPG  G  G  G +G  G  GP+G    PGP G++G  GA GE G  G LG  GE G PGN G PGQ G AGP G PG RG  G        G KG NG PG  G  G  G  G+ G+PG  G +GK+GP G  G                          G  G+PGK G  G  G PG  GL GKDGE
Sbjct:  455 GPKGQTGDPGVAGFKGEHGPKGEIGSAGPQG---APGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLG------GPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGE 642

HSP 4 Score: 56.9954 bits (136), Expect = 3.005e-7
Identity = 78/179 (43.58%), Postives = 94/179 (52.51%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQG------------VSGRDGPRGERGYPG---PNGQDGSPGAIGEIG---QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDG 1928
             G +G  G+PG+ G +GPPG +G            ++G  G  GERG PG   P G +G PG  GE G    RG  G  G+ G  G VG  G  G  G  GPPGP+G RG  G  G  G KG NG PG  G +G  G PG+ G PG+ G  G  GP G     GPAG+ G++G PGP G
Sbjct:  493 EGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPA---GPAGERGEQGPPGPSG 668

HSP 5 Score: 54.6842 bits (130), Expect = 1.709e-6
Identity = 73/178 (41.01%), Postives = 84/178 (47.19%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGT------------PGPDGKPGTNGLSGKDG 1964
            G PGS G  GP G +G  G  GPRGE G PG     G  GA G  G  G  G++G +G PG  G PG PGP GP GP G                       GPLGP+G  G PGV G  G+ G +G++G  G  G  GPAG+ GK G             PG  G PG  G  G+DG
Sbjct:  374 GAPGSKGEAGPTGARGPEGAQGPRGESGTPG---SPGPAGASGNPGTDGIPGAKGSSGAPGIAGAPGFPGPRGPPGPQGAT---------------------GPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDG 527

HSP 6 Score: 52.7582 bits (125), Expect = 5.521e-6
Identity = 78/206 (37.86%), Postives = 93/206 (45.15%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPR------------GERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQ---------------------GSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RGL G+ GD G  G +GP    G SG DG              G  G+PGP G +G PG  GE   +G LG+ G  GLPG  G+ G  GP GP GP                GE+G+ GPPGP G Q                     G  G PG+VG  G++G  G+ G  G  G  GP G PG  GT GP G  G +G +G  G
Sbjct:  565 RGLTGRPGDAGPQGKVGP---SGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGE---KGLLGAPGLRGLPGKDGETGAQGPNGPAGP---------------AGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQG 749

[Close]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Match: col1a2 (collagen type I alpha 2 [Source:NCBI gene;Acc:780175])

HSP 1 Score: 129.798 bits (325), Expect = 1.435e-29
Identity = 64/222 (28.83%), Postives = 110/222 (49.55%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP--------LVFKIQLQKPKFNWFSQS-NDNKFISYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            + I  P G+  +PAR+C  L   +P +  G YWIDPN G   D+++V+C     +TCI            +  + ++ K  WF ++ N    I Y+ +         Q  F+++++N ASQ IT +C+N          N  K + +   ND+ L +  +  F++ VLED C  ++ +   T +E  T++P+RLPI DI    +++  +  +   +I  VCF
Sbjct:  961 ETILTPEGSKKNPARTCRDLRLSHPDWSSGFYWIDPNQGCTSDSIRVFCDFSTGETCIHANPDSIPQKNWYTSKTKQRKHVWFGETINGGTQIEYNEEGVTSKDMATQFAFMRLLANHASQNITYHCKNSIAYMDGQTGNLKKAILLQGSNDVELRAEGNSRFTFSVLEDGCTQHTGEWGRTVIEYRTNKPSRLPILDIA--PLDIGGDDQEFGLDIGPVCF 1180

HSP 2 Score: 72.0182 bits (175), Expect = 6.804e-12
Identity = 67/173 (38.73%), Postives = 82/173 (47.40%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G+ G  G+ G  G  G +G  G +GERG  GP G+ GSPGA+G +G  G  G  G  G  G  GD                            G  G NG PGP G  G+ G  G+VG  G  G  GK GP G  G+ GP G+PG++G  GP G  G  G SG+ G
Sbjct:  526 RGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDG---------------------------GAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESG 671

HSP 3 Score: 66.2402 bits (160), Expect = 4.959e-10
Identity = 79/183 (43.17%), Postives = 97/183 (53.01%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMG---PPGRQGVSGRDGPRGE------RGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G KG+ G PG+LGA+G   P G  G +G  GPRG+       G+PGP G+ G+PG  G +G  G  G  G+ G  G  GD G  G  G  G  GP+G  G  G+    GE G  GPPG  GP G  G  G+ G PG +G  G  G  G  G  GPAG  G  G+ GP G  G+ GL+G  GE
Sbjct:  562 KGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSS---GESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGE 741

HSP 4 Score: 63.5438 bits (153), Expect = 2.953e-9
Identity = 79/177 (44.63%), Postives = 88/177 (49.72%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQG-----VSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G KG+ GD G  G  G PGR G     +      RGE G  GP+G  G  GA GE G+ G  GS G  G PG  G  G  G  GP GP G  G  G  G  G+ G  G NGP G  GP+G  G PG  G PG  G  G  GP G+VG  G  G PGK+G  GP G  G  G  G+ G
Sbjct:  477 GPKGEKGDAGHSGEYGNPGRDGARVSRLHYLYAHRGESGPAGPSGLAGPRGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQG 653

HSP 5 Score: 62.7734 bits (151), Expect = 4.947e-9
Identity = 78/172 (45.35%), Postives = 91/172 (52.91%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G+ G PG  G +GP G  G  G+DGPRG RG  GP G+ G  G  G  G  G+ GS GE+G  G  G  G  G  G +G  G  G RG  G PG  G  G++GP GP G  GSRG  G VG PG  G  G+ G +G  GN GP G+ G  G  G  G PG  G +G  G
Sbjct:  608 GPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGSLG 779

HSP 6 Score: 56.225 bits (134), Expect = 4.443e-7
Identity = 81/183 (44.26%), Postives = 93/183 (50.82%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPG---AIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGK---PGVVGKPGQQGSEGKLGPEGLVGNLGPA---GQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +GL G+ G  G  G  GPPG  G SG  G  G  G PG  G+ G+PG   A GE G  G  GS G  G  G VG PG  G  G  G  G  G  GP G  G  G KG+ G PG  GP GS G    PG VG  G+ G+ G+ GP G  G +GPA   G  G++GT G  G+ G  G  G DG 
Sbjct:  658 QGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGSLGAVGAPGAVGPSGKSGNRGEPGPVGHAGAVGPAGPRGPSGQQGTRGDKGEAGERGARGLDGR 840

HSP 7 Score: 55.0694 bits (131), Expect = 1.225e-6
Identity = 82/203 (40.39%), Postives = 97/203 (47.78%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGER---------GYPGPNGQDGSPGAIGEIGQRGKL------------GSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPP---GPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNL------GPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RGL G  G  G  G  GP G QG+ GR GP G           G+PGP G  G PG  G+ G +G              G+QG  GL GN GD G+ GPAG  G  G  G  G  G  G  GE+G+ G P   G  GP G+ G  G  G PG  G++G+ G  GL G L      G  G+ G  G PGP G+ G  G SG+ G
Sbjct:  290 RGLPGFSGSTGPAGKEGPAGPQGIEGRSGPAGASGPRGEPGSIGFPGPKGPAGEPGKNGDKGSQGPSGNRGAPGPDGNNGAQGPPGLAGNTGDKGEQGPAGAPGFQGLPGPGGAAGELGKHGERGERGAPGESGAAGPLGALGPRGPTGAPGSDGAKGEPGAAGLNGALGPSGPGGIPGERGAAGVPGPKGEKGDAGHSGEYG 492

HSP 8 Score: 52.7582 bits (125), Expect = 5.703e-6
Identity = 76/205 (37.07%), Postives = 88/205 (42.93%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGE------------------------RGYPGPNGQDGSPGAIGEIGQRGKLGS-----------QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            RG  G+ G  G LGA+GP G  G  G DG +GE                         G PGP G+ G  G  GE G  G+ G+           +GE+G  G  G  G  G  G  G  GP G  G  G PG  G  G  G  GP GP+G  G PG +G  G  G  G  GP G  G  G  G PG  G PGP G+ G  G +G
Sbjct:  416 RGAPGESGAAGPLGALGPRGPTGAPGSDGAKGEPGAAGLNGALGPSGPGGIPGERGAAGVPGPKGEKGDAGHSGEYGNPGRDGARVSRLHYLYAHRGESGPAGPSGLAGPRGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAG 620

[Close]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Match: col1a2 (collagen type I alpha 2 [Source:NCBI gene;Acc:780175])

HSP 1 Score: 129.028 bits (323), Expect = 2.459e-29
Identity = 64/222 (28.83%), Postives = 110/222 (49.55%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP--------LVFKIQLQKPKFNWFSQS-NDNKFISYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            + I  P G+  +PAR+C  L   +P +  G YWIDPN G   D+++V+C     +TCI            +  + ++ K  WF ++ N    I Y+ +         Q  F+++++N ASQ IT +C+N          N  K + +   ND+ L +  +  F++ VLED C  ++ +   T +E  T++P+RLPI DI    +++  +  +   +I  VCF
Sbjct:  861 ETILTPEGSKKNPARTCRDLRLSHPDWSSGFYWIDPNQGCTSDSIRVFCDFSTGETCIHANPDSIPQKNWYTSKTKQRKHVWFGETINGGTQIEYNEEGVTSKDMATQFAFMRLLANHASQNITYHCKNSIAYMDGQTGNLKKAILLQGSNDVELRAEGNSRFTFSVLEDGCTQHTGEWGRTVIEYRTNKPSRLPILDIA--PLDIGGDDQEFGLDIGPVCF 1080

HSP 2 Score: 72.4034 bits (176), Expect = 6.209e-12
Identity = 67/173 (38.73%), Postives = 82/173 (47.40%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G+ G  G+ G  G  G +G  G +GERG  GP G+ GSPGA+G +G  G  G  G  G  G  GD                            G  G NG PGP G  G+ G  G+VG  G  G  GK GP G  G+ GP G+PG++G  GP G  G  G SG+ G
Sbjct:  426 RGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDG---------------------------GAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESG 571

HSP 3 Score: 66.2402 bits (160), Expect = 4.468e-10
Identity = 79/183 (43.17%), Postives = 97/183 (53.01%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMG---PPGRQGVSGRDGPRGE------RGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G KG+ G PG+LGA+G   P G  G +G  GPRG+       G+PGP G+ G+PG  G +G  G  G  G+ G  G  GD G  G  G  G  GP+G  G  G+    GE G  GPPG  GP G  G  G+ G PG +G  G  G  G  G  GPAG  G  G+ GP G  G+ GL+G  GE
Sbjct:  462 KGPKGESGSPGALGAVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSS---GESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGE 641

HSP 4 Score: 62.7734 bits (151), Expect = 4.505e-9
Identity = 78/172 (45.35%), Postives = 91/172 (52.91%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G+ G PG  G +GP G  G  G+DGPRG RG  GP G+ G  G  G  G  G+ GS GE+G  G  G  G  G  G +G  G  G RG  G PG  G  G++GP GP G  GSRG  G VG PG  G  G+ G +G  GN GP G+ G  G  G  G PG  G +G  G
Sbjct:  508 GPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQGIGGPQGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGSLG 679

HSP 5 Score: 61.2326 bits (147), Expect = 1.448e-8
Identity = 66/167 (39.52%), Postives = 77/167 (46.11%), Query Frame = 3

Query: 1482 LGAMGPPGRQGVSGRDGPRGERGYPGPNGQDG---SPGAIGEIG---QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            LG  GP G  G++G  G  GERG  GP G  G    PGA G  G   +RG  G +GE+G PG +G                          G+ G  G NGP G  GP+G  G PG  G PG  G  G  GP G+VG  G  G PGK+G  GP G  G  G  G+ G
Sbjct:  411 LGESGPAGPSGLAGPRGAPGERGEAGPAGSTGFAGPPGAAGHTGVKGERGPKGPKGESGSPGALG------------------------AVGSHGPAGPNGPAGTTGPRGDGGAPGANGFPGPAGRTGAPGPAGIVGPSGATGHPGKDGPRGPRGDSGPVGRPGEQG 553

HSP 6 Score: 56.6102 bits (135), Expect = 4.237e-7
Identity = 81/183 (44.26%), Postives = 93/183 (50.82%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPG---AIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGK---PGVVGKPGQQGSEGKLGPEGLVGNLGPA---GQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +GL G+ G  G  G  GPPG  G SG  G  G  G PG  G+ G+PG   A GE G  G  GS G  G  G VG PG  G  G  G  G  G  GP G  G  G KG+ G PG  GP GS G    PG VG  G+ G+ G+ GP G  G +GPA   G  G++GT G  G+ G  G  G DG 
Sbjct:  558 QGLIGEKGSSGESGPAGPPGASGPSGVLGALGISGLPGARGERGTPGGPGANGESGPAGPAGSAGSRGPSGPVGSPGLTGVHGEAGRDGNPGNDGPPGRDGLPGVKGERGYPGGTGPAGSLGAVGAPGAVGPSGKSGNRGEPGPVGHAGAVGPAGPRGPSGQQGTRGDKGEAGERGARGLDGR 740

HSP 7 Score: 52.373 bits (124), Expect = 8.112e-6
Identity = 72/158 (45.57%), Postives = 80/158 (50.63%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPG 1919
            RGL G DG  G +GA   PG +G SG  G RG      PNG  G PG  G +G RG  G  G TG  G  G  G  G  G  GP G  G RG  G+ G  G KG  G PG  G +GS+G  G  G PG  G+ G  GP GL GN G  G+ G  G PG
Sbjct:  148 RGLPGPDGRAGGMGA---PGSRGASGPAGARG------PNGDAGRPGEPGLLGARGLPGFSGSTGPAGKEGPAGPQGIEGRSGPAGASGPRGEPGSIGFPGPKGPAGEPGKNGDKGSQGPSGNRGAPGPDGNNGAQGPPGLAGNTGDKGEQGPAGAPG 296

[Close]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Match: Col5a2 (collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458])

HSP 1 Score: 131.724 bits (330), Expect = 3.789e-30
Identity = 73/225 (32.44%), Postives = 107/225 (47.56%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQ------------------QMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDIILDSSDQI-FSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            + +  P G+   PAR+C  L   +P+   G YWIDPN G  +DA++VYC ++  +TCI      +     K  W S+S DNK + Y LD                    QMTFL+++S +ASQ +T  CRN         KN  K + +   ND+ +     I F Y VL+D C   + ++  T  E  T    RLPI  I+V  V++ +   +   +I  VCF 
Sbjct: 1278 ETMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAEDAIKVYCNMETGETCISANPASVPR---KTWWASKSPDNKPVWYGLDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVARLPI--IDVGPVDIGNADQEFGLDIGPVCFM 1497

HSP 2 Score: 64.3142 bits (155), Expect = 1.290e-9
Identity = 79/165 (47.88%), Postives = 93/165 (56.36%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNG---QDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGK 1931
             G++G  G PG  G  GP G  G  G  GP GERG PG  G    DG PG  G  G+RG +GS G  G  G+ G PG+PG  G  G  G  G +GP G  G LG  G++G PGP G  G RG+PG +G PG +GS G LG  G  GN   AG PG+ G PG DG+
Sbjct:  486 HGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGN---AGVPGQRGAPGKDGE 647

HSP 3 Score: 64.3142 bits (155), Expect = 1.440e-9
Identity = 78/176 (44.32%), Postives = 96/176 (54.55%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQ---DGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG +G  G+ G  G  G PG +G++G  GP G +G PGP G     G PG  G  G+RG  G+ G  G  G +G+ G  G AG  G  G  G  GP G  G  GEKG+ GP G +GP GSRG PG  G+ G  G+ G  GP+G  G  G  G+PG+ G  G  G PG  GL+G  G
Sbjct:  708 RGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

HSP 4 Score: 60.8474 bits (146), Expect = 1.722e-8
Identity = 71/188 (37.77%), Postives = 86/188 (45.74%), Query Frame = 3

Query: 1446 RGLKGKDGDPG------SLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGS---PGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP------DGKPGTNGLSGKDG 1964
            +G++G+ GDPG        G  G PG  G+ G  GP GE G  GP G  G+   PG +GE G  G  G  G  GLPG  G                             GE+G  G  GP G QG  G+PG  G PG +G  G  G +G  G LGP G PG++G PGP       G+PG+ GL G  G
Sbjct:  459 QGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKG---------------------------AQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG 619

HSP 5 Score: 59.6918 bits (143), Expect = 3.326e-8
Identity = 84/218 (38.53%), Postives = 104/218 (47.71%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKL------GSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPP---------------------------------GPLGPQ------GSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G  G+ G+PG  GA G  G  GV G +G  G  G PG +G+ G PG+IG  GQ G +      GS G+ G PG  G+ G PG  G  G  G  G  GP G PG  GE+G+ GPP                                 GPLGP+      G RG+PG+ G PG++G  G  GP+G  GN GP G  G  G PG  G PG  G++G  G
Sbjct:  555 QGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPG 772

HSP 6 Score: 55.8398 bits (133), Expect = 6.009e-7
Identity = 80/172 (46.51%), Postives = 94/172 (54.65%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G  G+PG  G  GP G +G  G  G RGE G PGP G  G PGA+G  G  G  G  G  G  G  G  G PG  GP G  GP+G RG +G+PG  G KG+ GP G  GP G +G    +G PG+   EGK GP G  G +GP G  G+ G PG  G PG++GL G  G
Sbjct:  373 GSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGP---IGPPGE---EGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKG 538

HSP 7 Score: 55.4546 bits (132), Expect = 6.995e-7
Identity = 70/190 (36.84%), Postives = 87/190 (45.79%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK---------------------LGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            G KG+ G  G +GAMGP G +G+ G  G  G +G PG  G  G PG  G +G    LG  G +G PGN G              G  G  G  G  G  G++G+ GPPGP G QG  G  G  G PG +G  G                       GP+G+ G  G  G PG +G  GP G+PG +G+ G
Sbjct:  316 GAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMG---PLGIPGSSGFPGNPG------------MKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQG 490

HSP 8 Score: 53.9138 bits (128), Expect = 2.222e-6
Identity = 79/174 (45.40%), Postives = 92/174 (52.87%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            RG  G  G PG +G +G PG  G  G  G +GE G  G  G +G  G  GE G  G  GSQG   LPG VG  G PG  GP G  G  G  G  G PG+ G +G  GP    G +G  G PGV G  G+ G +G+ GP G+ G +GP   PG+EG  GP G PGT G  G  GE
Sbjct:  354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQG---LPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGP---QGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGP---PGEEGKRGPRGDPGTVGPPGPMGE 518

[Close]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Match: Col2a1 (collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452])

HSP 1 Score: 129.413 bits (324), Expect = 1.976e-29
Identity = 71/239 (29.71%), Postives = 118/239 (49.37%), Query Frame = 3

Query: 3573 IQADDPLIAKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP--------LVFKIQLQKPKFNWFSQSNDNKF-ISY-------SLDQQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            ++ D  L  K L N  ++I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P          +  + ++ K  WF ++ +  F  SY       +    QMTFL+++S + SQ IT +C+N          N  K L I   ND+ + +  +  F+Y  L+D C  ++     T +E  S+ T RLPI  I++  +++     +   +I  VCF 
Sbjct: 1185 VEVDATL--KSLNNQIESIRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPATVPRKNWWSSKSKEKKHIWFGETMNGGFHFSYGDGNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPI--IDIAPMDIGGAEQEFGVDIGPVCFL 1419

HSP 2 Score: 58.151 bits (139), Expect = 1.110e-7
Identity = 83/218 (38.07%), Postives = 100/218 (45.87%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIG------------------QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPGVVGKPGQQGSEG---KLGPEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG  G PG  G  G PG QG +G  GP+G RG  GP G  G PGA G +G                  + G  G +G++G PG  GDPG  GPAG  G                 GE GD+GP G   P GPQG  G+ G+VG PGQ+G  G     GP G  G  G                      AG+PG+EG+PG DG PG +G +G  G+
Sbjct:  787 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEK---------------GEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGD 989

[Close]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Match: Col2a1 (collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452])

HSP 1 Score: 126.716 bits (317), Expect = 1.228e-28
Identity = 71/239 (29.71%), Postives = 118/239 (49.37%), Query Frame = 3

Query: 3573 IQADDPLIAKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP--------LVFKIQLQKPKFNWFSQSNDNKF-ISY-------SLDQQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            ++ D  L  K L N  ++I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P          +  + ++ K  WF ++ +  F  SY       +    QMTFL+++S + SQ IT +C+N          N  K L I   ND+ + +  +  F+Y  L+D C  ++     T +E  S+ T RLPI  I++  +++     +   +I  VCF 
Sbjct: 1253 VEVDATL--KSLNNQIESIRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPATVPRKNWWSSKSKEKKHIWFGETMNGGFHFSYGDGNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPI--IDIAPMDIGGAEQEFGVDIGPVCFL 1487

HSP 2 Score: 59.3066 bits (142), Expect = 4.856e-8
Identity = 83/218 (38.07%), Postives = 100/218 (45.87%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIG------------------QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPGVVGKPGQQGSEG---KLGPEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG  G PG  G  G PG QG +G  GP+G RG  GP G  G PGA G +G                  + G  G +G++G PG  GDPG  GPAG  G                 GE GD+GP G   P GPQG  G+ G+VG PGQ+G  G     GP G  G  G                      AG+PG+EG+PG DG PG +G +G  G+
Sbjct:  855 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEK---------------GEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGD 1057

[Close]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Match: Col1a1 (collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467])

HSP 1 Score: 119.013 bits (297), Expect = 2.907e-26
Identity = 68/241 (28.22%), Postives = 111/241 (46.06%), Query Frame = 3

Query: 3573 IQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSN--DNKFISYSLDQQ-------------------QMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILD-SSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            ++ D  L +     + I  P G+  +PAR+C  L   +  +  G YWIDPN G   DA++VYC ++  +TC    VF  Q   P+ NW+   N  + K + +                        Q+TFL+++S +ASQ IT +C+N          N  K L +   N+I L    +  F+Y  L D C  ++     T +E  T++ +RLPI  I+V  +++ +   +   +I   CF
Sbjct: 1218 LEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVYCNMETGQTC----VFPTQPSVPQKNWYISPNPKEKKHVWFGESMTDGFPFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIELRGEGNSRFTYSTLVDGCTSHTGTWGKTVIEYKTTKTSRLPI--IDVAPLDIGAPDQEFGLDIGPACF 1452

HSP 2 Score: 51.9878 bits (123), Expect = 6.907e-6
Identity = 63/156 (40.38%), Postives = 71/156 (45.51%), Query Frame = 3

Query: 1500 PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            PG  GV+G  GP GERG PGP G  GSPG  G  G+ G  G++G TG PG+                               G  G  GPPGP G  G  G  G  G  GQ G  G  GP+G       AG+PGK G  G  G PG  G +GKDGE
Sbjct:  485 PGADGVAGPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSP------------------------------GPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGT------AGEPGKAGERGLPGPPGAVGPAGKDGE 604

[Close]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Match: Col3a1 (collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453])

HSP 1 Score: 117.472 bits (293), Expect = 9.635e-26
Identity = 70/254 (27.56%), Postives = 115/254 (45.28%), Query Frame = 3

Query: 3561 GYMIIQADDPLIAKYLGNDAISK-------------PLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQ--------KPKFNWFSQSNDNKF-ISY-------SLDQQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            G+     DDP+  K    + +S              P G+  +PAR+C  L   +P    G YW+DPN G   DA++V+C ++  +TCI      +  +        + K  WF +S +  F  SY        +   Q+ FL+++S++ASQ IT +C+N          N  K L++   N+    +  +  F+Y VLED C  ++ + S T  E  +R   RLPI  I++   ++     +   +I  VCF 
Sbjct: 1213 GFSPYYGDDPMDFKINTEEIMSSLKSVNGQIESLISPDGSRKNPARNCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPMTVPRKHWWTDSGAEKKHVWFGESMNGGFQFSYGPPDLPEDVVDVQLAFLRLLSSRASQNITYHCKNSIAYMDQASGNVKKSLKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYQTRKAMRLPI--IDIAPYDIGGPDQEFGVDIGPVCFL 1464

HSP 2 Score: 56.6102 bits (135), Expect = 3.126e-7
Identity = 66/182 (36.26%), Postives = 83/182 (45.60%), Query Frame = 3

Query: 1491 MGPPGRQGVSGRDGPRGERGYP------GPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGS---RGKPGVVGKPGQQGSEGKLGPE------------------GLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
             GP G+ G SGR G  GERG P      GP G  G PG  G  G  G+ G +GETG PG  G+                            G  GDNG PGP+GP+G+   RG+PG+ G  G +G++G  G +                  G  G +GPAG PG  G+PG  G+PG  G +G
Sbjct:  223 AGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN---------------------------GLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAG 377

[Close]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Match: sp|B8V7R6|COA_ACRMI (Collagen alpha chain (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.936e-32
Identity = 128/389 (32.90%), Postives = 196/389 (50.39%), Query Frame = 3

Query: 3198 GDDGLNAKDGEEGAPGKQGPRG------------DKGFTGEIGPDGKQGVKGKPGP---NXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSN--------RQQGYMI------------IQADD---PLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP-------LVFKIQLQKPKFNWFSQS-NDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQI-FSYKVLEDNCQHNSQ--DLSSTRLEITSRP-TRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            G DG+  K GE G  G QGP+G            DKG+TG  G  G QG +G+PGP   +G+ G  GPRG  G  G +G+PG  G  G  G++GP+G+LG  G  G  G  GP GP GPPGPPG PG++ +++        +  G+ +            I+A++    L  K    D++  P G+   PA++C  L   + +F  G YWIDPNGG + DA++VYC  K+  +C+ P       LV K   +  +  W S++   ++ + Y     Q+ FL+ +SN A+Q +T  CRN    ++    +++   ND+   +S +I     V+ + C +  +      T LEI +R  +RLPI  ++V   +V  E    +  I   CF+
Sbjct:  498 GADGIPGKTGEPGPQGDQGPKGQKGEVGPVGEKGDKGWTGTPGDPGPQGDRGEPGPPGRDGVDGPPGPRGAPGEMGAVGDPGLNGSMGEPGNKGPDGDLGESGAKGPDGIKGPPGPPGPPGPPGQPGMSEIASYLSVGNLEKGPGFRLYSSSGEEMPKQKIKAENVLKDLDEKDKEMDSLIAPDGSRKFPAKTCYDLFLDHGNFESGEYWIDPNGGTVKDAIKVYCDKKKNSSCVYPTNPKISDLVLKSGFESKEDKWLSKAFKKSEEVEYDAHYTQINFLRTLSNYANQNVTYACRNSKAWEDGQHSIKLMGSNDMEYHASSKISLRPTVIMNECANGGKLDKWGKTVLEIDTRERSRLPI--VDVSAFDVGREGQDFKLEIGPACFH 884

HSP 2 Score: 65.855 bits (159), Expect = 2.644e-9
Identity = 68/194 (35.05%), Postives = 92/194 (47.42%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGP------------PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPA---------GQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G +G+ G+PG+ G+ G             PG+QG +G  G  GE G PGP G+ G+ G  G  G  G  G  GE G+PG  G                             GE+G  G PGP+      G PG+ G PGQQG  G +G +G  G++GP          G+PG++G+PGP G+PG  G  G+DG
Sbjct:   50 QGRQGERGEPGTAGSQGQQGQPGTQGPPGLPGKQGETGEPGESGEDGTPGPRGERGAQGERGATGMMGPSGDPGEAGIPGADG---------------------------KAGERGVPGAPGPV------GTPGLPGMPGQQGPMGPIGAKGSKGDVGPTGERGYDGKDGEPGRDGSPGPIGQPGIPGEKGEDG 210

HSP 3 Score: 57.3806 bits (137), Expect = 1.120e-6
Identity = 77/178 (43.26%), Postives = 96/178 (53.93%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPG------NVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G KG+ G PG+ G MG  G  GV G    +GE+G PG NG++GSPG  G  G +G  G+ G +G  G        G  G+PG  G  G PG  G  G  G  G  G KGD GPPG  G +G RG  G+ GK G+ G +G  GP+G  G +GP G+ G +G  G  G PG  G  G+ G
Sbjct:  378 GPKGERGTPGATGPMGNSGPPGVQGS---KGEKGPPGTNGRNGSPGISGSRGAQGPPGAPGSSGQNGVDGGTGENGTNGRPGLKGESGAPGDPGASGSAGPAGPPGPKGDTGPPGIQGEKGRRGADGIPGKTGEPGPQGDQGPKGQKGEVGPVGEKGDKGWTGTPGDPGPQGDRGEPG 552

[Close]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Match: sp|O93484|CO1A2_ONCMY (Collagen alpha-2(I) chain OS=Oncorhynchus mykiss OX=8022 GN=col1a2 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 7.620e-31
Identity = 76/259 (29.34%), Postives = 121/259 (46.72%), Query Frame = 3

Query: 3549 NRQQGYMIIQADDP-LIAKYLGNDAISK-----------PLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISY---------------SLDQQ----QMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            ++  GY   +AD P   AK    DA  K           P G+  +PAR+C  +   +P +  G YWIDPN G I DA++ YC      TCI P    I  +    NW+  S + K + +               +L  Q    Q+ F+++++N+A+Q IT +C+N          N  K + +   ND+ L +  +  F++ VLED C  ++   S T +E  T++P+RLPI DI    +++     +   +I  VCF
Sbjct: 1103 DQSGGYDEYRADQPSFRAKDYEVDATIKSLNSQIENLLTPEGSKKNPARTCRDIRLSHPDWSSGFYWIDPNQGCIADAIKAYCDFSTGHTCIHPHPESIARK----NWYRSSENKKHVWFGETINGGTEFAYNDETLSPQSMATQLAFMRLLANQATQNITYHCKNSVAYMDGENGNLKKAVLLQGSNDVELRAEGNSRFTFNVLEDGCTRHTGQWSKTVIEYRTNKPSRLPILDIA--PLDIGEADQEFGLDIGPVCF 1355

HSP 2 Score: 54.299 bits (129), Expect = 9.848e-6
Identity = 61/160 (38.12%), Postives = 68/160 (42.50%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDG 1928
            G +G  G PG  GA+G PGR G +G  GPRG      P G  G PG  G  G+ G+ G+ G  G PG  G                             G KGD G PG  G  GS G+PG  G  G  G  G  G  G  GN GP G  G  G PGP G
Sbjct:  871 GSRGDKGLPGGPGAVGEPGRLGPAGASGPRG------PAGNIGMPGMTGTQGEAGREGNSGNDGPPGRPG---------------------------AAGFKGDRGEPGSPGALGSSGQPGPNGPAGSAGRPGNRGESGPTGNGGPVGAVGARGAPGPAG 997

[Close]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Match: sp|Q3U962|CO5A2_MOUSE (Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.650e-29
Identity = 73/225 (32.44%), Postives = 107/225 (47.56%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQ------------------QMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDIILDSSDQI-FSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            + +  P G+   PAR+C  L   +P+   G YWIDPN G  +DA++VYC ++  +TCI      +     K  W S+S DNK + Y LD                    QMTFL+++S +ASQ +T  CRN         KN  K + +   ND+ +     I F Y VL+D C   + ++  T  E  T    RLPI  I+V  V++ +   +   +I  VCF 
Sbjct: 1278 ETMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAEDAIKVYCNMETGETCISANPASVPR---KTWWASKSPDNKPVWYGLDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVARLPI--IDVGPVDIGNADQEFGLDIGPVCFM 1497

HSP 2 Score: 64.3142 bits (155), Expect = 9.027e-9
Identity = 79/165 (47.88%), Postives = 93/165 (56.36%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNG---QDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGK 1931
             G++G  G PG  G  GP G  G  G  GP GERG PG  G    DG PG  G  G+RG +GS G  G  G+ G PG+PG  G  G  G  G +GP G  G LG  G++G PGP G  G RG+PG +G PG +GS G LG  G  GN   AG PG+ G PG DG+
Sbjct:  486 HGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGN---AGVPGQRGAPGKDGE 647

HSP 3 Score: 64.3142 bits (155), Expect = 1.007e-8
Identity = 78/176 (44.32%), Postives = 96/176 (54.55%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQ---DGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG +G  G+ G  G  G PG +G++G  GP G +G PGP G     G PG  G  G+RG  G+ G  G  G +G+ G  G AG  G  G  G  GP G  G  GEKG+ GP G +GP GSRG PG  G+ G  G+ G  GP+G  G  G  G+PG+ G  G  G PG  GL+G  G
Sbjct:  708 RGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

HSP 4 Score: 60.8474 bits (146), Expect = 1.204e-7
Identity = 71/188 (37.77%), Postives = 86/188 (45.74%), Query Frame = 3

Query: 1446 RGLKGKDGDPG------SLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGS---PGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP------DGKPGTNGLSGKDG 1964
            +G++G+ GDPG        G  G PG  G+ G  GP GE G  GP G  G+   PG +GE G  G  G  G  GLPG  G                             GE+G  G  GP G QG  G+PG  G PG +G  G  G +G  G LGP G PG++G PGP       G+PG+ GL G  G
Sbjct:  459 QGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKG---------------------------AQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG 619

HSP 5 Score: 59.6918 bits (143), Expect = 2.326e-7
Identity = 84/218 (38.53%), Postives = 104/218 (47.71%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKL------GSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPP---------------------------------GPLGPQ------GSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G  G+ G+PG  GA G  G  GV G +G  G  G PG +G+ G PG+IG  GQ G +      GS G+ G PG  G+ G PG  G  G  G  G  GP G PG  GE+G+ GPP                                 GPLGP+      G RG+PG+ G PG++G  G  GP+G  GN GP G  G  G PG  G PG  G++G  G
Sbjct:  555 QGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPG 772

HSP 6 Score: 55.8398 bits (133), Expect = 4.203e-6
Identity = 80/172 (46.51%), Postives = 94/172 (54.65%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G  G+PG  G  GP G +G  G  G RGE G PGP G  G PGA+G  G  G  G  G  G  G  G  G PG  GP G  GP+G RG +G+PG  G KG+ GP G  GP G +G    +G PG+   EGK GP G  G +GP G  G+ G PG  G PG++GL G  G
Sbjct:  373 GSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGP---IGPPGE---EGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKG 538

HSP 7 Score: 55.4546 bits (132), Expect = 4.893e-6
Identity = 70/190 (36.84%), Postives = 87/190 (45.79%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK---------------------LGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSG 1955
            G KG+ G  G +GAMGP G +G+ G  G  G +G PG  G  G PG  G +G    LG  G +G PGN G              G  G  G  G  G  G++G+ GPPGP G QG  G  G  G PG +G  G                       GP+G+ G  G  G PG +G  GP G+PG +G+ G
Sbjct:  316 GAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMG---PLGIPGSSGFPGNPG------------MKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQG 490

[Close]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Match: sp|O42350|CO1A2_LITCT (Collagen alpha-2(I) chain OS=Lithobates catesbeianus OX=8400 GN=COL1A2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.779e-29
Identity = 66/224 (29.46%), Postives = 108/224 (48.21%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCI---------KPLVFKIQLQKPKFNWFS---------QSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            + I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C     +TCI         K        +  K  WF          + +D    +  +   Q+ F+++++N+ASQ IT +C+N          N  K + +   ND+ L +  +  F+Y VLED C  ++ +   T +E  T++P+RLPI DI    +++     +I + I  VCF
Sbjct: 1134 EVILTPEGSRKNPARTCRDLRLSHPEWTSGFYWIDPNQGCTSDAIRVFCDFSSGETCIHANPDEITQKNWYINTSNKDKKHLWFGEILNGGTQFEYHDEGLTAKDM-ATQLAFMRLLANQASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELRAEGNTRFTYSVLEDGCTKHTGEWGKTVIEYRTNKPSRLPILDIA--PLDIGGHDQEIGFEIGPVCF 1354

HSP 2 Score: 59.3066 bits (142), Expect = 2.937e-7
Identity = 76/164 (46.34%), Postives = 88/164 (53.66%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP------NGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXX---XXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEG 1910
            RG +G  G PGS G  GP G  G SG  GP G  G PGP       G+DG PG  G  G+ G  G++GE G PGN G  G  G    AG  GP G  G RG  G  G  G  G +GP GP GPQG RG  G  G+ G +G +G+ G  GL G  GP+G PG+ G
Sbjct:  870 RGERGLPGGPGSNGEPGPSGLAGSSGPRGPPGSVGSPGPVGHSGEAGRDGHPGNDGPPGRDGLPGAKGERGYPGNTGPSGLAGAPGPAGSAGPAGKSGNRGEGGPSGPAGITGPSGPRGPAGPQGVRGDKGEAGERGARGLDGRKGHNGLSGLPGPSGTPGETG 1033

HSP 3 Score: 57.7658 bits (138), Expect = 8.510e-7
Identity = 63/171 (36.84%), Postives = 76/171 (44.44%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGK 1958
            RG  G+ G+ G  G  G  G  G +G  G +G+RG  GP G+ GSPG +G  G  G  G  G  G  G  GD                            G  G  G PGP G  G+ G PG VG  G  G  GK G  G  G+ GP G+PG++G  GP G  G  G SG+
Sbjct:  699 RGAPGERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGSPGPLGAHGSAGPAGPNGPAGSTGARGD---------------------------AGPSGATGFPGPAGRAGAPGPPGNVGPSGPTGHPGKDGSRGPRGDSGPVGRPGEQGQHGPVGLAGDKGPSGE 842

HSP 4 Score: 57.7658 bits (138), Expect = 9.578e-7
Identity = 64/164 (39.02%), Postives = 72/164 (43.90%), Query Frame = 3

Query: 1485 GAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQ---RGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  GP G  G  G  G RGE G  GP G  G PGA G  G    RG  G +GE G PG +G                          G+ G  G NGP G  G +G  G  G  G PG  G  G  GP G VG  GP G PGK+G+ GP G  G  G  G+ G+
Sbjct:  688 GPAGPSGVAGPRGAPGERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGSPGPLG------------------------AHGSAGPAGPNGPAGSTGARGDAGPSGATGFPGPAGRAGAPGPPGNVGPSGPTGHPGKDGSRGPRGDSGPVGRPGEQGQ 827

HSP 5 Score: 55.4546 bits (132), Expect = 5.012e-6
Identity = 80/209 (38.28%), Postives = 95/209 (45.45%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMG---------PPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---------P------LGPQGSRGKPGVVGK---PGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---------DGKPGTNGLSGKDG 1964
            +G KG+ G PG LGA G         P G  G  G  GP G  G+PGP G+ G+PG  G +G  G  G  G+ G  G  GD G  G  G  G  GP            +G  GD GP G                LG +G  G PG  G+   PG  GS G+ GP GL G+ GP G PG  G+PGP         DG PG +G  G+DG
Sbjct:  735 KGPKGEAGSPGPLGAHGSAGPAGPNGPAGSTGARGDAGPSGATGFPGPAGRAGAPGPPGNVGPSGPTGHPGKDGSRGPRGDSGPVGRPGEQGQHGP------------VGLAGDKGPSGEAGPAGPPGAAGPSGVLGARGILGLPGTRGERGLPGGPGSNGEPGPSGLAGSSGPRGPPGSVGSPGPVGHSGEAGRDGHPGNDGPPGRDG 931

[Close]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Match: sp|P02459|CO2A1_BOVIN (Collagen alpha-1(II) chain OS=Bos taurus OX=9913 GN=COL2A1 PE=1 SV=4)

HSP 1 Score: 130.954 bits (328), Expect = 4.206e-29
Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWF-SQSNDNKFI------------SYSLD-------QQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            +++  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+ P    +    PK NW+ S+S D K I            SY  D         QMTFL+++S + SQ IT +C+N          N  K L I   ND+ I    +  F+Y VL+D C  ++     T +E  S+ T RLPI  I++  +++     +   +I  VCF 
Sbjct: 1267 ESLRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPASV----PKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTMIEYRSQKTSRLPI--IDIAPMDIGGPEQEFGVDIGPVCFL 1487

[Close]

BLAST of Fibrillar collagen vs. TrEMBL
Match: A0A0R3U1N0 (Fibrillar collagen NC1 domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS285 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.784e-52
Identity = 137/346 (39.60%), Postives = 192/346 (55.49%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI------QLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            +PG  G    DG  G PGK GP G KG+ G  G  G +G +G  GP G  G+ GP G  G +G  G  G  GE G+QGD+GP G  G  G DG QGP GP G  GPPGPPGPP +         Y +   DD   A+++G D+I KP G+   PAR+C HLA++NP  PDG YWIDPN G I DA++VYC I+  +TC+ P   +       Q    + +WF++    K  +Y++   Q+ FLKM+S+KA Q +T+ CR     ++S    R+ +DND     S ++F Y V+ D C+        T +E+ +RP RLP++D+    V   S+  ++   +  VC+
Sbjct:  985 YPGRAGF---DGPSGRPGKAGPTGHKGWMGPPGDSGPKGQRGAKGPPGSRGHQGPTGLPGEQGSQGFEGPVGEVGYQGDQGPTGLPGPAGRDGPQGPAGPVGNQGPPGPPGPPAIT--------YDMAVNDDAAQAQFIGTDSIDKPDGSRGLPARTCKHLAKVNPHLPDGYYWIDPNSGSIKDAIEVYCHIQTGETCVSPSTEEFDGKTYDQAVPGEEHWFNELQGGKLFTYNVPGDQLAFLKMLSSKAKQNVTVMCR-----QSSQDEARLLSDNDRYFSRSGELFRYNVVRDECKFMKDTYGYTVMEVMTRPQRLPVRDVSFSDVGGSSK--EVGVKLSPVCY 1312

[Close]

BLAST of Fibrillar collagen vs. TrEMBL
Match: A0A0X3PTQ4 (Fibrillar collagen NC1 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR119418 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 7.502e-50
Identity = 135/348 (38.79%), Postives = 180/348 (51.72%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFN--------WFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
             PG  G     G  G PG+QGP+G +G  G  GP G  G  G PG  G  G+                G  GE GFQG++G  G  G  G DG QG  GP G +GPPGPPGPP +         Y +  +DD   AKY+G D+I  P G+   PARSC HLA + P   DG YWIDPN G I DA+QVYCKI   +TCI     +I+ Q   F+        WF+    +    Y +   Q++FLK++S KA Q IT+ CR   V +      R+  DND+   +   +F YKVL D+CQ+      ST L+++SR  RLP++DI     ++  E  ++  ++  VCF
Sbjct:  995 RPGKPGSAGHKGWMGPPGEQGPKGQRGMQGPAGPRGYDGPTGLPGGRGPIGFV---------------GQVGEIGFQGEQGAAGPPGPAGRDGPQGNPGPMGNHGPPGPPGPPAIT--------YDMRMSDDADQAKYIGTDSIELPDGSRGLPARSCRHLARVKPHLDDGYYWIDPNAGSIKDAIQVYCKIATGETCIGAQTAEIETQ--PFSSATSGVEYWFTALTGSSRFDYEIPGDQLSFLKLLSAKAKQKITVTCRQSSVTEYGSY-SRLLADNDLFFSAEGPLFRYKVLRDDCQYKKDSYGSTVLQVSSRAHRLPVRDISF--ADIGGEDREVGVSLGPVCF 1314

HSP 2 Score: 63.929 bits (154), Expect = 3.862e-6
Identity = 73/185 (39.46%), Postives = 85/185 (45.95%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGP------------LGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  G  GD G LGA G  G  G +G DG  G  G PG  G  G  G +G  G++G +G  G  G+PG  G                    G  G+ G  G KG  GPPGP            +G  G RG PG  G  G+QG  G  GP G  G++G  G PG  GTPG DG  G +G  GKDGE
Sbjct:  240 GAVGLKGDVGELGAAGSTGDPGEAGPDGSPGVHGEPGEMGTPGKDGPVGRKGEQGAIGPMGPAGMPGPRG------------------VMGSAGSQGAAGSKGSQGPPGPQGSVGPPGYTGPVGDAGERGPPGPDGDIGKQGLRGPPGPSGERGDVGSPGAPGVPGTPGLDGPTGMSGAPGKDGE 406

[Close]

BLAST of Fibrillar collagen vs. TrEMBL
Match: W6UR32 (Collagen alpha-2(I) chain OS=Echinococcus granulosus OX=6210 GN=EGR_01301 PE=4 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.241e-49
Identity = 135/360 (37.50%), Postives = 189/360 (52.50%), Query Frame = 3

Query: 3198 GDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQG----------------YMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKP------KFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            GD G +  DG +G PG  G  G +G+ G  G DG  G  G+PGP G  G+ GP G  G KG  G+ G TG +G QG  G  G  G QG +G  G +G QG  GP G PGPPG                          Y +   DD   A+Y+G D+I KP G+   PAR+C HLA +NP  PDG YWIDPN G I DA++VYC I+  +TC+ P     +++        + +WF +   +K   Y++ + Q+ FLKM+S KA+Q +T+ CR     ++S +  R+ +DND       ++F Y VL D CQ+       T +E+ SRP RLP++DI    V   S+  ++   +  VC+
Sbjct:  960 GDRGESGADGPDGQPGTPGEPGPRGYPGRNGIDGLPGRPGRPGPTGHKGWMGPPGDPGPKGQRGSKGHTGPRGHQGPTGLPGEQGPQGFEGPMGEMGYQGEQGPTGLPGPPGRDGPQGPPGPVGNQGPPGPPGPPAITYDMAFNDDTAQAQYIGTDSIDKPDGSRKLPARTCKHLALVNPHLPDGFYWIDPNAGSIKDAIEVYCHIRMGETCVAPKADDFEVRSYSDINIGEEHWFHELQGSKLFEYNVPEDQLAFLKMLSTKANQNVTVVCR-----QSSQEEARLMSDNDHYFLRDGELFRYNVLRDECQYMKDSYGYTVMEVVSRPQRLPVRDISFRDVGGYSK--EVGVRLSPVCY 1312

[Close]

BLAST of Fibrillar collagen vs. TrEMBL
Match: A0A0R3W2Y4 (Fibrillar collagen NC1 domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS4230 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.360e-49
Identity = 137/360 (38.06%), Postives = 190/360 (52.78%), Query Frame = 3

Query: 3198 GDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQG----------------YMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLV--FKIQ----LQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            G+ G +  DG+ G PG+ GPRG   + G  G DG  G  G+PGP G  G+ GP G  G KG  G  G TG +G QG  G  G  G QG +G  G +G QG  GP G PGPPG                          Y +   DD   A+++G D+I KP G+   PAR+C HLA++NP  PD  YWIDPN G I DA++VYC I+  +TCI P    F+++    +   + +WF +   +K   Y+L   Q+ FLKM+S+KA Q +T+ CR     ++S +  R+ +DND       + FSY VL D CQ+       T +E+ SRP RLP++DI    V   S+  ++   +  VC+
Sbjct:  934 GEPGADGPDGQPGTPGEPGPRG---YPGRTGADGLPGRPGRPGPTGHKGWMGPPGDPGPKGQRGAKGLTGPRGHQGPTGLPGEQGPQGFEGPMGEMGYQGEQGPTGLPGPPGRDGPQGPPGPVGNQGPPGPPGPPAITYDMAFNDDAAQAQFIGTDSIDKPDGSRKLPARTCKHLAQVNPHLPDDFYWIDPNAGSIKDAIEVYCHIRMGETCITPKEDDFEVRSYADVNDGEEHWFHELQGSKLFEYNLPGDQLAFLKMLSSKAKQNVTVVCR-----QSSQEEARLLSDNDHYFSRYGEPFSYNVLRDECQYMKDSYGYTVMEVVSRPQRLPLRDISFRDVGGHSK--EVGVRLSPVCY 1283

[Close]

BLAST of Fibrillar collagen vs. TrEMBL
Match: A0A183TBD1 (Fibrillar collagen NC1 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS13779 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.265e-49
Identity = 135/348 (38.79%), Postives = 180/348 (51.72%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFN--------WFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
             PG  G     G  G PG+QGP+G +G  G  GP G  G  G PG  G  G+                G  GE GFQG++G  G  G  G DG QG  GP G +GPPGPPGPP +         Y +  +DD   AKY+G D+I  P G+   PARSC HLA + P   DG YWIDPN G I DA+QVYCKI   +TCI     +I+ Q   F+        WF+    +    Y +   Q++FLK++S KA Q IT+ CR   V +      R+  DND+   +   +F YKVL D+CQ+      ST L+++SR  RLP++DI     ++  E  ++  ++  VCF
Sbjct: 1027 RPGKPGSAGHKGWMGPPGEQGPKGQRGMQGPAGPRGYDGPTGLPGGRGPIGFV---------------GQVGEIGFQGEQGAAGPPGPAGRDGPQGNPGPMGNHGPPGPPGPPAIT--------YDMRMSDDADQAKYIGTDSIELPDGSRGLPARSCRHLARVKPHLDDGYYWIDPNAGSIKDAIQVYCKIATGETCIGAQTAEIETQ--PFSSATSGVEYWFTALTGSSRFDYEIPGDQLSFLKLLSAKAKQKITVTCRQSSVTEYGSY-SRLLADNDLFFSAEGPLFRYKVLRDDCQYKKDSYGSTVLQVSSRAHRLPVRDISF--ADIGGEDREVGVSLGPVCF 1346

[Close]

BLAST of Fibrillar collagen vs. Ensembl Cavefish
Match: col1a1a (collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102])

HSP 1 Score: 127.102 bits (318), Expect = 6.892e-29
Identity = 70/238 (29.41%), Postives = 116/238 (48.74%), Query Frame = 3

Query: 3573 IQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI---------QLQKPKFNWFSQSNDNKF-ISYSLDQQ-------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            ++ D  L +     ++I  P GT  +PAR+C  L   +P +  G YWIDP+ G   DA++VYC ++  +TC+ P    I          +++ K  WF ++  + F   Y  ++        Q+TFL+++S +ASQ IT +C+N     +       K L +   N+I I    +  F+Y V ED C  ++     T ++  T++ +RLPI DI    V   ++   IE  +  VCF 
Sbjct: 1200 LEVDTTLKSLSQQIESIRSPDGTKKNPARTCRDLKMCHPDWKSGEYWIDPDQGCNQDAIKVYCNMETGETCVYPSQSDIPQKNWYTSKNIKEKKHVWFGEAMTDGFQFEYGGEESKPEDVNIQLTFLRLMSTEASQNITYHCKNSIAYMDQASGNLKKALLLQGSNEIEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFGIE--VGPVCFL 1435

HSP 2 Score: 55.4546 bits (132), Expect = 5.982e-7
Identity = 64/152 (42.11%), Postives = 78/152 (51.32%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPG 1901
            RG  G+ G PG  G +G  G  G +G DG +GE      +G  G+PGA G  G +G  G +G  GLPG  GD G  G  G  G  GP G  G        G+KG+ G  GP+GP G+RG PG  G+ G  G  G  GP G  G  G  G+PG
Sbjct:  663 RGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGE------SGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQ------GDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPG 802

HSP 3 Score: 53.9138 bits (128), Expect = 1.579e-6
Identity = 80/203 (39.41%), Postives = 95/203 (46.80%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLG---AMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQR---------------------GKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLG------PQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G  G+ G PG++G   A G PGR G  G  G +G  G PG  G DG  GA G  GQ                      G  G+ GE G PG  G  G  G AG  G  G  G  G  G  G  GE+G+ GP GP G      PQG+ G+PG   KPG+QG  G+ G  G  G+ G  G PG+ G PGP G  G+ G  G  G
Sbjct:  489 KGAPGERGGPGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPG---KPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAG 688

HSP 4 Score: 51.9878 bits (123), Expect = 5.459e-6
Identity = 71/186 (38.17%), Postives = 84/186 (45.16%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDG------------PRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G  G+ G PG  G MG  G  G  G+DG            P GERG  GP G  G  G  G  G  G+ G  GE GLPG  G                    GP+G+ G+ G  G+ G PGP GP GSRG PG     G  G++G+ G  G  G  GP   PG +G PG  G  G  GL G  G+
Sbjct:  570 KGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGLPGEAG------------------ATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAA---GNDGAKGESGASGAPGAQGP---PGLQGMPGERGAAGLPGLKGDRGD 731

[Close]

BLAST of Fibrillar collagen vs. Ensembl Cavefish
Match: col27a1b (collagen, type XXVII, alpha 1b [Source:NCBI gene;Acc:560145])

HSP 1 Score: 102.834 bits (255), Expect = 1.337e-21
Identity = 101/354 (28.53%), Postives = 146/354 (41.24%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIK-EKKTCIKPL-VFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVK-------PLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLE-ITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEE--VCF 4211
             PGD G     G  G  G +GP GD G +G  GP G QG+ G+ G  G  G                 G +G  G QGD+G  G  G  G  G QGP                  A  S+     +    +      YL N   +I  PLGT  +PAR C  L +      DG YWIDPN G   D ++V C      +TC++PL V K+++                    +   QM F+ ++S++A Q ITI+C N+PV   +          +R  T N  ++ +   +    +++D C         T+ + +T  P  LPI    VD +N+   +    Y++E   VCF
Sbjct:  509 QPGDPGEQGFPGILGIFGPKGPPGDFGPSGIQGPKGPQGLMGREGTIGPVGII---------------GPSGYPGPQGDKGNRGETGPPGPRGPQGPPKNGELGAAFQVIFDSYSALRSDMDLPMLDQGTEIFKTLHYLSNLIYSIKNPLGTQENPARMCRDLLDCEQRMNDGTYWIDPNLGCSSDTIEVTCNFTGGGQTCLRPLTVSKLEM-------------------GVGLIQMNFIHLLSSEAVQLITIHCLNVPVWATAASRPPSASNSVRFKTWNGQMIQAGG-LIQPDLVKDECWMTDGRWHQTQFQFVTQDPNLLPI----VDVLNLPITKPGSNYHLEVGPVCF 823

HSP 2 Score: 59.6918 bits (143), Expect = 2.418e-8
Identity = 81/200 (40.50%), Postives = 99/200 (49.50%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG---PLGPQGSRGKPG--VVGKPGQQGSEGKLGPEG---------------------LVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G KG  G PG  G  G PG QG  G  GP G+ G  GP G+ G  G +G +G+RG +G  G  G  G +G+ G PG  G  G PGP+G    +   G  GE G  G PG   P GP G++G PG  + G+PG  G  G+ GP+G                     L G  GP G PG  G  GP+GKPG  G  GK GE
Sbjct:   38 QGDKGIQGLPGMPGIRGRPGPQGFPGDIGPPGQNGPEGPKGEPGIMGNVGMLGERGLVGFIGPVGETGLLGEKGHPGTPGERGEPGPQGIPVSSAVIGETGEPGARGFPGIQGPSGPPGAKGIPGEPIQGEPGHDGEAGRSGPDGAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGE 237

HSP 3 Score: 52.7582 bits (125), Expect = 3.158e-6
Identity = 70/199 (35.18%), Postives = 90/199 (45.23%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEI---GQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNG------PPGPLGPQGSRGKPGVVG----------------KPGQQGSEGKL-GPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG+ GD G+ G  G  G  G+ G++GP G+ G  G  G +G PG IGE    G++G  G QG  G+ G VGD G  G                       G KG+ G      PPG +G QG  G  G  G                K G+QG +GK+ GP G  G++GP G  G  G  G  G PG  G+ G+ G+
Sbjct:  182 GAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGEKGSKGHQGHLGMTGEVGDLGPVGFP---------------------GPKGNRGTIGFVVPPGKMGMQGDPGLSGYEGHQGPQGPIGPPGPKGAKQGEQGDDGKIEGPAGPPGDIGPVGHRGDRGESGDPGYPGQIGVDGQRGK 359

[Close]

BLAST of Fibrillar collagen vs. Ensembl Cavefish
Match: col27a1b (collagen, type XXVII, alpha 1b [Source:NCBI gene;Acc:560145])

HSP 1 Score: 102.449 bits (254), Expect = 2.328e-21
Identity = 113/379 (29.82%), Postives = 161/379 (42.48%), Query Frame = 3

Query: 3195 PGDDGLNAKDGEEGAPGKQG---PRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQG------DRGPNGNLGAQGIDGAQXXXXXXXXXXXX--------XXXXXXXVATMSNRQQGYMIIQADDPLI---------AKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIK-EKKTCIKPL-VFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVK-------PLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLE-ITSRPTRLPIKDIEVDTVNVRSERSQIEYNIE--EVCF 4211
            PG+ G + + G  G  G QG   P+G++G  GE GP GK+GV G  G          +G  G  G  G PG  GEQGF G       +GP G+ G  GI G +GP G  G  G                G       Q        D P++           YL N   +I  PLGT  +PAR C  L +      DG YWIDPN G   D ++V C      +TC++PL V K+++                    +   QM F+ ++S++A Q ITI+C N+PV   +          +R  T N  ++ +   I    +++D C         T+ + +T  P  LPI    VD +N+   +    Y++E   VCF
Sbjct:  855 PGNSGPHGQTGPPGLRGSQGSFGPKGERGLAGETGPIGKRGVPGGMG---------NQGKQGDTGVKGQPGDPGEQGFPGILGIFGPKGPPGDFGPSGIQGPKGPQGLMGREGTIGPVGIIGPSGYPVRGPPGPRGPQGPPAYSDMDLPMLDQGTEIFKTLHYLSNLIYSIKNPLGTQENPARMCRDLLDCEQRMNDGTYWIDPNLGCSSDTIEVTCNFTGGGQTCLRPLTVSKLEM-------------------GVGLIQMNFIHLLSSEAVQLITIHCLNVPVWATAASRPPSASNSVRFKTWNGQMIQAGGLI-QPDLVKDECWMTDGRWHQTQFQFVTQDPNLLPI----VDVLNLPITKPGSNYHLEVGPVCF 1200

[Close]

BLAST of Fibrillar collagen vs. Ensembl Cavefish
Match: col5a1 (procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6])

HSP 1 Score: 100.523 bits (249), Expect = 8.705e-21
Identity = 60/219 (27.40%), Postives = 98/219 (44.75%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKE-KKTCIKPLVFKIQLQKPKF------NWFSQSNDNKFISYS------LDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSY------KVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            + +  PLGT ++PAR+C  L   +P FPD  YWIDPN G   D+ +VYC      ++CI P       +  ++       W+S+      +SY+      +   QMTFL+++S  A Q +T NC     +    + L  +      L S+D+  SY      +   D C    +    T LEI T +  ++P  DI  +     +++    + +   CF
Sbjct: 1194 EQMKHPLGTQSNPARTCKDLQLCHPDFPD-EYWIDPNQGCSRDSFKVYCNFTAGGESCIYPDKKSDGSKMARWPKDSPGTWYSRYKRGSMLSYADAEGNPIGVVQMTFLRLLSASARQNLTYNCYQ--SVAWHDQDLDSYDKAIRFLGSNDEEMSYDNNPYIRAAVDGCALK-KGYEKTVLEINTPKVEQVPFVDIMFNDFGGATQK--FGFEVGPACF 1406

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BLAST of Fibrillar collagen vs. Ensembl Cavefish
Match: ENSAMXT00000043273.1 (pep primary_assembly:Astyanax_mexicanus-2.0:13:4246717:4253158:1 gene:ENSAMXG00000033238.1 transcript:ENSAMXT00000043273.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 95.1301 bits (235), Expect = 2.010e-20
Identity = 69/229 (30.13%), Postives = 108/229 (47.16%), Query Frame = 3

Query: 3600 KYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCI--------KPLVFKIQLQKPKFNWFSQSND--------NKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKN----SVKPLRIFTDND--IILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITS-RPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            K LG+  D++  P G+   PAR+C  L +  P    G YW+DPN G   DA+QVYC ++  +TCI        +   +  +   PK  W+  + +        N+  S S+   QM FL++ S +A+Q +T +C+N    K+    + K   +    D   I    +    Y V ED+C  +S +   T  E  S +P+RLPI D+    V+V     +   +I  VCF
Sbjct:  106 KTLGSELDSMRSPDGSRQHPARTCQDLKQCYPLKKSGNYWVDPNEGSSKDAIQVYCNMETGETCISANPSSVPRKHWWSSRSSTPKPVWYGATMNRGAKFTYGNQEDSLSIVTIQMRFLRLHSKEAAQTLTYHCKNSIAYKDGKNSNYKKAALLKSADGLEIKAHGNNRLKYTVTEDSCMKSSSEWGKTVFEYRSQKPSRLPIVDMA--PVDVGGADQEFGIDIGPVCF 332

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BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003197.1 (pep scaffold:Pmarinus_7.0:GL479090:2162:37629:-1 gene:ENSPMAG00000002618.1 transcript:ENSPMAT00000003197.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 126.716 bits (317), Expect = 1.508e-29
Identity = 72/248 (29.03%), Postives = 119/248 (47.98%), Query Frame = 3

Query: 3534 VATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP----LVFKIQLQKP----KFNWF--SQSNDNKFISYSLDQQ----QMTFLKMISNKASQFITINCRNMP-----VIKNSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
             A    + QG   ++ +  + +  +  + +  P G+  +PAR+C +L    P  P G+YWIDPN G   DA+QV+C ++  ++C+      +  K    KP    K  WF  + S D +F +Y  D      Q+TFL++ S +ASQ IT +C+N        + N  + L +   N++ I    +   +Y VLED C  ++     T +E  T + +RLPI DI    V    +  +   ++  VCF 
Sbjct:  943 FAADEAQNQGERNLELEASISSLNVRVENMVSPDGSQKNPARTCRNLKLCYPDLPSGLYWIDPNEGSKSDAIQVWCNMETGESCMNADNPSIARKNWWLKPSGSKKHVWFGVTMSPDAQF-TYGEDSHSTEIQLTFLRLFSTEASQKITYHCKNSVAYQDGAVGNLQQALLLQGSNEMEIRAEGNSKLAYSVLEDGCTMHTGQWGKTVIEYRTPKTSRLPIVDIAPKDVGGPDQ--EFGVDVGPVCFL 1187

HSP 2 Score: 50.8322 bits (120), Expect = 3.048e-6
Identity = 70/165 (42.42%), Postives = 82/165 (49.70%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGA-----MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGE------------------KGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLV 1871
            +G +G+ G PGS GA      GP G +G  G DGP G  G PGP+G  GS G +G  GQRG+ G  G  GL G  G  G  GP+G  G  GP G  G  G+PG+ G                   KGD GPPG  GP G+   PG  G  GQ GS G+ G  G V
Sbjct:  658 KGPRGETGPPGSTGAPGAGVTGPSGEKGAPGDDGPVGAEGSPGPSGLAGSRGVVGLPGQRGERGFSGPAGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRGPPGNAGPAGA---PGASGPSGQAGSPGRTGERGDV 819

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BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001071.1 (pep scaffold:Pmarinus_7.0:GL476837:726:42204:1 gene:ENSPMAG00000000855.1 transcript:ENSPMAT00000001071.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 125.561 bits (314), Expect = 4.181e-29
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPD--GIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWF-SQSNDNKFI----SYSLDQQ------------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            ++I+ P G+   PARSC  L   +P +    G YWIDPN G   DA++V+C ++  ++C+ P +  +    P+ NW+ SQ+ D K +    + S   Q            Q+TFL+++S  ASQ IT +C+N     +S      K L +   +D+ I    +  F+Y VLED C  ++     T +E  T + +RLP  DI    ++V     +   ++  VCF
Sbjct: 1056 ESITSPDGSRKHPARSCRDLMLCHPEYKSDTGEYWIDPNEGCRADAIKVWCNMETGESCVNPGMPSL----PRKNWWRSQAADKKHVWLGETMSPGSQFTYGDGSPNMEVQLTFLRLLSTDASQKITYHCKNSVAYLDSRAGNLKKALMLQGSSDVEIRAEGNSRFTYSVLEDGCTTHTGVWGKTVIEYRTQKTSRLPFMDIA--PMDVGGSDQEFGVDVGPVCF 1274

HSP 2 Score: 50.447 bits (119), Expect = 3.881e-6
Identity = 77/173 (44.51%), Postives = 88/173 (50.87%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G DG PG   A GPPG +G +G  G +G  G PG  G+ G PG  G  G  G  GS G+TG PG  G+ G PG  G  G  G  G  G  G  G  GE G  G  G +GP G  G PG  G  G  G  G  GP G  G  GP G PG +G PG  G PG +G +G+ G
Sbjct:  313 RGAPGGDGSPG---AKGPPGERGATGPAGAKGNSGDPGRPGEAGLPGPRGSTGSPGHAGSDGKTGPPGPAGNDGSPGSPGAAGARGAPGAMGFPGAKGPSGESGKPGEKGSVGPVGPIGLPGKDGDAGPAGPAGPAGPGGERGEAGPVGAPGFQGLPGAPGAPGESGKAGEPG 482

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BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005318.1 (pep scaffold:Pmarinus_7.0:GL477895:43798:56979:-1 gene:ENSPMAG00000004829.1 transcript:ENSPMAT00000005318.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 122.865 bits (307), Expect = 6.387e-29
Identity = 69/240 (28.75%), Postives = 117/240 (48.75%), Query Frame = 3

Query: 3579 ADDPLIAKYLGN--DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQ--SNDNKFISY-------------------SLDQQQMTFLKMISNKASQFITINCRNMPVIKNSV----KPLRIFTDNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            A+  +  K L N  + I  P GT   PARSC  L   +  +  G YWIDPN G + DA++V+C ++  +TC+ P    +    P  NW+S   S ++K + +                   ++ + Q+ FL++++ +ASQ IT  CRN     ++     K +R+    ++ L +     F+Y +LED C  ++ +   T L+  T++P+RLPI DI    +++     +    I  VCF
Sbjct:  377 AEVDVTLKSLTNQLENIMSPEGTKTDPARSCRDLMLCHSDWKSGEYWIDPNEGSVLDAMKVWCNMETGETCVYPKPKNV----PSKNWWSNKGSREHKHVWFGEAMPGGFHFSYGDDTMSANIAEVQLNFLRLVAAEASQNITYLCRNSVAYADAAGSLRKAVRLMGSGELELRADGKNRFTYSMLEDGCAKHTGEWGKTVLQYKTNKPSRLPIVDIA--PLDIGGPEQEFGVEIGPVCF 610

HSP 2 Score: 65.0846 bits (157), Expect = 8.345e-11
Identity = 77/173 (44.51%), Postives = 92/173 (53.18%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G PGS G +G  G QG+SG+   RGERG PG NG  GS      +G+ G  G QGE G PGNVG PG  G  G  G  G  G  G +G  G  G +GD G P   G  G  G PG +G PG  G+ GK G  G  G  G +G  G+ G+ GP G  G NG  G+ G+
Sbjct:   89 GTRGTAGAPGSSGFLGSHGIQGLSGQ---RGERGVPGLNGPTGS------LGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEP---GTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGD 249

HSP 3 Score: 54.6842 bits (130), Expect = 1.371e-7
Identity = 62/173 (35.84%), Postives = 80/173 (46.24%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +GL G+ G+ G  G  GP G  G SG  G +GERG PG  G  G  GA GE G+ G  G+ G +G  G  G                             G++G+ G PG  G  G+ G PG+ G  G+ G  G+ GP+G  G +G  G  G  G  GP+G  G  G SG+ G
Sbjct:  109 QGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAG---------------------------VRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERG 254

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BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001576.1 (pep scaffold:Pmarinus_7.0:GL476350:400893:424819:1 gene:ENSPMAG00000001417.1 transcript:ENSPMAT00000001576.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 119.398 bits (298), Expect = 1.473e-27
Identity = 68/203 (33.50%), Postives = 101/203 (49.75%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFS-QSNDNKFISYSLDQQ-------------------QMTFLKMISNKASQFITINCRNMPVIK-----NSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDI 4142
            D+I  P G+  +PAR+C  L   +P +  G Y+IDPN G   DA++V+C ++  +TC    V+      P+ +W++ +S D K I +                        QMTFL+++S +ASQ IT +C+N          N  K L +   NDI I    +  F+Y VLED C  ++ D   T LE  T + +RLPI DI
Sbjct:  524 DSIRSPEGSRKNPARTCRDLKLCHPEWKSGDYFIDPNQGCTLDAIKVFCNMESGETC----VYASPQNVPRKSWWTNKSKDRKHIWFGETMNSGSQFNYGDDSLPPNTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDEQAGNLKKALLLQGSNDIEIRAEGNSRFTYNVLEDGCTKHTGDWGQTVLEYRTQKTSRLPIVDI 722

HSP 2 Score: 51.9878 bits (123), Expect = 9.426e-7
Identity = 82/221 (37.10%), Postives = 99/221 (44.80%), Query Frame = 3

Query: 1458 GKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQ---------------------GSEGKLGPEGLVGNLGPAGQPGKEGTPGP------------------------------DGKPGTNGLSGKDGE 1967
            G DG PG+ G  G  G++G +G  GP+G  G PGP G +G PG  G    RG  G  G TG PG  G  G PGP G  GPPGP G  G  G  G  G+ G  G  G  G QG+ G PG  G+PG+                      G  G+ G  G  G  GP+G+PGK+G+PGP                              DG PG +G SG+ GE
Sbjct:   97 GSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKG---ARGAQGPSGATGFPGAAGRVGPPGPNGNPGPPGPPGPGGKDGPKGIRGDSGPAGRSGEPGLQGAAGPPGEKGEPGEDGPSGPEGPPGPMGLAGQRGIVGLPGQRGERGFSGLPGPSGEPGKQGSPGPSGERGPPGPNGPPGLSGPPGEQGRDGNPGSDGPPGRDGSSGQKGE 314

HSP 3 Score: 50.0618 bits (118), Expect = 3.579e-6
Identity = 68/163 (41.72%), Postives = 83/163 (50.92%), Query Frame = 3

Query: 1485 GAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKE---GTPGPDGKPGTNGLSGKDG 1964
            G  G PG +G +G  GP+G+RG  G  G +G+PG  G  G  G +G  G +G  G+ G+ G PGP GP G  G              GE+G+ GPPGP G  G  G  G  G  G+QG  G+ G  G  G  GPAG PG +   G PGP G  G  G SG  G
Sbjct:    4 GLQGMPGERGTAGAPGPKGDRGDGGEKGPEGAPGKDGSRGLTGPIGPPGPSGSAGDKGEAGPPGPTGPAGTRGSP------------GERGETGPPGPAGFAGPPGSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGARGAQGPSGATG 154

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BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009617.1 (pep scaffold:Pmarinus_7.0:GL476473:139194:170406:1 gene:ENSPMAG00000008685.1 transcript:ENSPMAT00000009617.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 109.383 bits (272), Expect = 2.904e-24
Identity = 61/207 (29.47%), Postives = 96/207 (46.38%), Query Frame = 3

Query: 3615 DAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISY-------------------SLDQQQMTFLKMISNKASQF-----ITINCRNMPVIK-----NSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDI 4142
            + +  P GT  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  +TC+       Q    K  W S+S D K + +                   +    QMTFL+++S +A        IT +C+N          N  K L +   ND+ I    +  F+Y VLED+C  ++ +   T +E  T + +RLP  D+
Sbjct:  667 EGLRSPEGTRKNPARTCRDLKLCHPEWESGNYWIDPNQGCTLDALKVFCNMETGETCV---YANPQTISRKNWWQSKSADRKHVWFGEAMSGGLHFNYGDDNLPANTAAIQMTFLRLLSMEAYDLPAAANITYHCKNSIAYMDEETGNLKKALLLQGSNDMEIRAEGNSRFTYNVLEDSCTKHTGEWGRTVVEYRTQKTSRLPFVDV 870

HSP 2 Score: 52.7582 bits (125), Expect = 5.730e-7
Identity = 66/181 (36.46%), Postives = 83/181 (45.86%), Query Frame = 3

Query: 1455 KGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGET---------------GLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLS 1952
            +G++G+ GS GA   PGR G +G  G RGE G  G  G  GSPGA G +G  GK G++G+                GLPG  G                             G+KG+ G  G  G +G RG  G+ G PG  GS G    +GL G++GP+G  G  G  GP GK G NG S
Sbjct:  434 QGREGNAGSDGA---PGRDGAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNGARGDQGPQGPMGPPGPSGARGLPGPQG---------------------------PRGDKGETGEAGERGIKGHRGFTGLQGLPGPPGSSGD---QGLAGSVGPSGPRGLSGPTGPPGKDGNNGQS 581

HSP 3 Score: 50.447 bits (119), Expect = 3.121e-6
Identity = 78/208 (37.50%), Postives = 89/208 (42.79%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRG---ERGYPGPNGQDGSPGAIGEIG---------------------------QRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKP------------GVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G PG+ G  G  G+ GVSG  G RG   ERG PGP G  G+ G  G  G                           +RG  G  G  G  G+ G+ G  G  G  G  G  G  GP G  G  G+KGD GP GP GP G+RG P            G  G PG  G  G  G +G  G  G AG PG +G  G  G  G NG+SG  G
Sbjct:   77 GKPGAQGVPGEAGKVGVSGARGERGFPGERGAPGPQGLQGARGLPGTPGTDGPKGATGPGGPPGAQGPPGLQGMPGERGATGISGAKGDRGDSGEKGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKG 284

[Close]

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Match: EDO42953 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S046])

HSP 1 Score: 140.969 bits (354), Expect = 1.374e-33
Identity = 123/372 (33.06%), Postives = 176/372 (47.31%), Query Frame = 3

Query: 3198 GDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMS-----------NRQQGYMII-------QADDPLIA-------KYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKP-----LVFKIQLQ-KPKFNWFSQS-NDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDS-SDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            GDDG   KDG++G  G QGP G +G  G  GP G++G KG  G +G PG                PG  GEQG  G  G +G  G +G  G  GP+G  G  GPPGPPGPPG   +S            +  GY +        + D+P ++         +  + I KP G  N+PA++C  L   +P +  G YWIDPN G   DA++VYC      +CI P     L  ++Q     K  W S++  +   I YS +Q Q+ FL++ S +A Q +T NC+N     N    +++  DND+I  + S + F   V+ + C         T L I T +  RLPI D+ +       ++  +E  +  VCF
Sbjct: 1048 GDDG---KDGKQGPAGPQGPNGPQGDKGNRGPRGEKGDKGFTGSDGSPGA---------------PGQQGEQGPPGVAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPGPPGYTGLSPVGGYLSVGTVEKGPGYRLYAGSKDAKKPDNPSVSFMTALEKMEIDVNTIRKPTGMKNNPAKTCKDLRMDHPDYVSGYYWIDPNEGSKKDAIRVYCDFSNDFSCISPTKAKLLNLRVQANVNKKDKWLSEAFEEESQIDYSAEQSQIAFLRVFSKRAYQNVTYNCQNYKAWTNRKHSIKLRGDNDLIFHAKSPKKFQPTVILNECTTKDDQWHKTILAIDTKQKHRLPIVDMALFDFGKPHQKVTVE--VGSVCF 1399

HSP 2 Score: 63.5438 bits (153), Expect = 6.695e-10
Identity = 84/203 (41.38%), Postives = 100/203 (49.26%), Query Frame = 3

Query: 1467 GDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS---------------QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------PLGPQG---------SRGKPGVVGK------PGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            GDPGS GA GP G  G +G +G +GE+G PG  G  GS G  G  G+ G+ G                +G+TGLPG+ G  G+PG  G       +G  G  G  G  G KG NG PG      P GP G         SRG PGV GK      PG++G  G  GP+G  G  GP G PGK G  GP G+ GT+G  G  GE
Sbjct:  438 GDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGE 640

HSP 3 Score: 63.1586 bits (152), Expect = 7.994e-10
Identity = 71/178 (39.89%), Postives = 89/178 (50.00%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQG---SRGKPGVVGKPGQQGSEGKLGPEG---LVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            GL G DG  G  GA G P R  + G  G  G  G  G  G +G PG  G+ G +G  G++GE+GL G+ G                    G  G  GN GE G+ GP GP GPQG   ++G PG+ GK G+ G  G+ G +G    +G  GP G+ G  G  GP GKPG  G +G DG
Sbjct:  510 GLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRG------------------MPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADG 669

HSP 4 Score: 61.6178 bits (148), Expect = 2.542e-9
Identity = 74/192 (38.54%), Postives = 90/192 (46.88%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPD------------------GKPGTNGLSGKDGE 1967
            RG  G  G  G+ G  GPPG  G +G  GPRGERG       DG PGA+GE G +G+ G  G TG  G  GD G  G  G         +         +GE G  GP G  G  G +G PG  G+ G  G++G  G  G V   GP G  GK+G PG D                  G+PGTNG +GK+G+
Sbjct:  596 RGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGT------DGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFAI-----IGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRV---GPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGD 773

HSP 5 Score: 58.151 bits (139), Expect = 3.366e-8
Identity = 64/134 (47.76%), Postives = 80/134 (59.70%), Query Frame = 3

Query: 1563 NGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            NG++G  G+ GE G+ G+ G  GE G PG  G+PG PGP G  G  GP G+ G        GEKG +GPPG  G +G  G PG+ G+ G  G +G+ G  G VG  GP GQPG+ G PG  GKPG NG +G+ G
Sbjct:  876 NGRNGVKGSTGEGGRPGRDGEPGEPGTPGRDGEPGIPGPDGRPGERGPGGEIGRK------GEKGPSGPPGITGNRGPPGSPGIKGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPGEPGKPGINGTNGRGG 1003

HSP 6 Score: 55.0694 bits (131), Expect = 2.386e-7
Identity = 80/173 (46.24%), Postives = 98/173 (56.65%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G KG  G PG  G  GPPG  G+      +GERGYPG +G+ G PGA+G    RG  G  GE GLPG  G PG  G  G  G PG +G+RG  G PG  G++G     GP GP G+ G+PGV G  G +G +GK G +G  G  GP G  G +G  GP G+ G  G +G DG
Sbjct:  930 KGEKGPSGPPGITGNRGPPGSPGI------KGERGYPGKDGRAGEPGAVG---LRGPTGQPGENGLPGEPGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPP---GPSGPLGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGDKGFTGSDG 1090

HSP 7 Score: 51.2174 bits (121), Expect = 4.136e-6
Identity = 66/161 (40.99%), Postives = 74/161 (45.96%), Query Frame = 3

Query: 1485 GAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  GP G  G  G  GP GE G PGP G +G PG  G  G  G  G QG  G PG                    G +GP  N    G KG NG PGP      RG PG+   PG +GS+G  G  G VG  G +G  G+ G  GP G PG +G SG  GE
Sbjct:   73 GQRGPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGG-------------STQAAGGIKGPDPNDLAAGIKGSNGAPGP------RGSPGL---PGPRGSDGPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDGFSGAPGE 211

[Close]

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Match: EDO49401 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGC7])

HSP 1 Score: 106.686 bits (265), Expect = 8.849e-26
Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = 3

Query: 3630 PLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVF-KIQLQKPKFNWFSQS-NDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            PLGT   PAR+C  L    P    G YWIDPNGG  +D++ VYC      +CI P  F K    +  + WF+Q  + ++   Y+ D  Q+ FL+++S++ASQ IT +CRN     +S      K +++ + N I +  +S   +   +++D+C         T LE+ +  T RLPI DI V  +  R E   ++  I  VCF
Sbjct:   25 PLGTHRHPARTCRDLKLCRPEAESGQYWIDPNGGITEDSILVYCDFALNASCITPNQFMKWYSGRDGYKWFAQDLHGSQQFHYTSDPSQLLFLRLLSDRASQKITYHCRNSVAWYDSRSRDFDKSIKLKSGNGIELYAASSNKYKPTIIKDDCGVKDGKWRKTVLEVNTESTHRLPIVDIAVFDIGDRDEEFGLQ--IGSVCF 225

[Close]

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Match: EDO49368 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG67])

HSP 1 Score: 109.768 bits (273), Expect = 1.953e-24
Identity = 70/236 (29.66%), Postives = 113/236 (47.88%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIA--KYLGNDAIS--KPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFN------WFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            +  S +QQ  +I   D  LIA    L N  ++  +  GT   PARSC +L   NP    G Y+IDPN G   DA +V+C      TC+ P   +I  +    N      W ++++D K I Y LD  QM FL+++   A Q +T +C N    ++S + +++  DN       ++  + K+  + CQ+       T L+I T +  +LPI D+    +    + +Q +  +  VCF
Sbjct:  409 SVSSTKQQ--LICFLDVCLIAVINLLINKIVTYKEQEGTKGKPARSCRNLKIDNPDKKSGYYYIDPNEGSPSDAEEVWCDFTTNATCVFPKNTEIITRSLVVNSNGEDTWITENDDVK-IDYKLDVVQMKFLRLMHKTAKQNMTYHCYNSRAWEDS-RTIKLLGDN-------EEEITAKLRLNECQNKDNQWHKTVLDISTKQKDKLPIIDVAPYDLQ---DGAQFKIELGPVCF 630

HSP 2 Score: 73.1738 bits (178), Expect = 5.048e-13
Identity = 87/196 (44.39%), Postives = 105/196 (53.57%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXX--------XXXXXXXXXXXXLGEKGDNGPPG------PLGPQG---------SRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G+ G  GD G  GA+GP G+QG  G  GP G +G  G NGQDG PG  G  G+RG  G QG+ G+ G  G+ G+ GPAG   P           +G RG TG PG  G+KG NG PG        GPQG         +RG PGV G PG QG  G  G  G  G  G  G+ G  G+PGP G+PG +G +G DG
Sbjct:   12 QGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADG 207

HSP 3 Score: 67.3958 bits (163), Expect = 3.108e-11
Identity = 74/191 (38.74%), Postives = 90/191 (47.12%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGA------MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSR---------GKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQ---PGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G PG+ G       +GP G+QG  G  GP G +G  G NGQDG PG  G  G+RG  G QG+ G+ G  G+                        P   G  GD+G  GP GPQGSR         G  G  G PG+ G  G  GP+G  G+ G AG    PG  GTPGP G+ G +G  G+ GE
Sbjct:    7 GPQGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGN-------------------QGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGE 178

HSP 4 Score: 56.9954 bits (136), Expect = 4.635e-8
Identity = 76/178 (42.70%), Postives = 98/178 (55.06%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGP-----PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G +G  G+ G+ G  GP     PG  G  G  GP+G RG  GP G +G  GA G  G+ G  G+QG  G  G+ G  G  G  G  G PGP+G+RG  G PG  GE+G  G  GP G  G  G+PGV G+ G  G+ G+ G +   G+ G +G PG+ G+PGP G PG  G  G+ G
Sbjct:   72 QGKQGVSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQ---GSSGASGLPGRPGSPGPAGAPGLKGPRGEKG 246

HSP 5 Score: 55.0694 bits (131), Expect = 1.863e-7
Identity = 63/176 (35.80%), Postives = 78/176 (44.32%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVG---NLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG+ G  G  G  GA G PGR G  G  GP+G++G  G  G  G PG  G  G +G+ G+ G+ G  G  G                            +GE G  G PGP G  G  G+ G  G PG++G +G  G  GL G   + GPAG PG +G  G  G  G  G  G  G
Sbjct:  110 RGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERG---------------------------AVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDRGSKGPKG 258

HSP 6 Score: 55.0694 bits (131), Expect = 2.228e-7
Identity = 73/202 (36.14%), Postives = 89/202 (44.06%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGP----------------------------LGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G +G DG PG  G  G  G  G +G  GP G+ G  G  G DG+PG      +RG+ GS G +GLPG  G PG  G  G  GP G +            G KGD G  GP                            +GP G  G+PG+ G PG +G  G  G +G  G  G AG PG  G  GP G  G+ G +G  GE
Sbjct:  164 QGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPG------ERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEK------------GAKGDRGSKGPKGGASGFPGKPGLPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGANGEPGSAGSPGTPGAMGPPGDSGSKGAAGIIGE 347

[Close]

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Match: EDO44729 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV66])

HSP 1 Score: 107.457 bits (267), Expect = 2.067e-23
Identity = 102/361 (28.25%), Postives = 155/361 (42.94%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKE-KKTCIKPLVFKIQLQKPKFNW----------FSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVK-------PLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYN--IEEVCF 4211
            +PG  G   + GE+G  G+ G RG KG  GE G  GK+G  G PG                     +PGS G+ G +G     G+LG++G  G                     +     +Q  ++I+     L    + +D    PLG+  +PA +C  L  +N    DG YWIDPN G   DA++VYCK K   ++C++P +  I    PK  W          FS+      I+Y  ++ Q+ FL++++ K +Q I + C+++ V  +              F  +    +SS    S  VL D C+++      T L   T++   LPI D    T   RS  +  E+   IE VCF
Sbjct:  793 NPGLLGRKGRQGEKGTAGRLGERGKKGPFGENGVLGKRGTLGPPG---------------------SPGSIGDMGAKGH---PGSLGSKGRRGK-------LGPPGEPGKPGEILNLHLLKQNTHLIVNDKKSLYLSEM-DDKSKTPLGSRANPALTCHELKHVN-GIKDGEYWIDPNQGCSSDAIKVYCKFKTGGESCVRPALKMI----PKETWNNATTAGWYQFSKLERGYKITYLTNKVQLNFLRLLTTKVTQKIIVKCKSVVVWFHRHSKSYDYSWKFHGFNGHQFTYNSSRS--SLNVLRDACKYDDGRWRRTELLFETTKLRTLPIVDF---TYYHRSLTTPEEFGVKIEPVCF 1111

HSP 2 Score: 58.9214 bits (141), Expect = 1.766e-8
Identity = 76/184 (41.30%), Postives = 92/184 (50.00%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPG---------AIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGP---LGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G  G  G  G +G++GP G QG  GR G +G+ GY G +G  G  G          +G IG +G LG  G  G+PG VG  G  G  G  G  G +G  G  G  G  G  G+ G PGP   +GP G++G  G VG PG  GS G  G  G  G+LG +G PG  G  G  GKPG  G  G  G
Sbjct:  122 GALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPGIRGHEGLQG 305

HSP 3 Score: 55.4546 bits (132), Expect = 1.808e-7
Identity = 76/187 (40.64%), Postives = 98/187 (52.41%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPR---GERGYPGPNGQDGSPGAIGEIGQRGK---------LGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKL---------GPEGLVGNLGPAGQPGKEGTPGPDGKPGTNG 1946
            GL G  G PG  G  GP G QG+ G  GPR   GE+G+ G  G  GS G IG  G++GK          GS+G++GLPG+ G  G PG  G  G  G  G+ G  G  G+ G  G++GP G LG +G +G  G +G  G QG +G++         G +G  G+ G  G PG +GT GP G  G  G
Sbjct:    2 GLMGSRGTPGDQGGRGPQGVQGLLGDRGPRGPPGEQGFSGVKGAVGSHGLIGRKGEKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILG 188

HSP 4 Score: 52.373 bits (124), Expect = 1.758e-6
Identity = 66/179 (36.87%), Postives = 79/179 (44.13%), Query Frame = 3

Query: 1458 GKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGK------PGVVGKPGQQGSEGKLGPEGLVGNLGPAGQP---GKEGTPGPDGKPGT-NGLSGKDG 1964
            G  G  G++GA G  G QG  G  GP G +G  G  G  G PG  GE+G RG  G  G  G+PG VG                                     PGP+G QG  G       PG+ GK G +GSEG  G  G+ G  GP G P   G+ GTPG  G PG+ +G+ GK G
Sbjct:  437 GVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGK------------------------------------PGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGVYGMKGMKGPIGVPGFRGQHGTPGDIGPPGSESGVPGKTG 579

HSP 5 Score: 51.6026 bits (122), Expect = 2.799e-6
Identity = 61/169 (36.09%), Postives = 77/169 (45.56%), Query Frame = 3

Query: 1479 SLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGL---VGNLGPAGQPGKEGTPGPDGKPGT---NGLSGKDGE 1967
            S GA GP G +G  G  GP+G  G  GP G+ G  G  G IG +G++G QG+                                     GE+G  GP G  G  GS+G PG  G+ G +G  G+LG EG+   VG  GP G  G+EG  GP+G PG     GL G +G 
Sbjct:  405 SRGAAGPSGPRGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDR------------------------------------GEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGS 537

[Close]

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Match: EDO44697 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV65])

HSP 1 Score: 103.219 bits (256), Expect = 4.849e-22
Identity = 66/231 (28.57%), Postives = 99/231 (42.86%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKE-KKTCIKPLVFKIQLQKP---KFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSST-RLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A  S  Q    II+A           D I  P G  +SPAR+C  L  +    PDG YW+DPN G I+DA   +C      +TCI P+    +  K    K  + +     K   Y  +  Q+ FL+++S  ASQ  T +C   P  K S   L +F  N     S  +          CQ   ++  +  +LE+      LPIKD  +   +      ++++++  VCFY
Sbjct: 1317 AVQSEEQHKEAIIEASVLF-------DKIVLPEGKKDSPARTCRELMTLRKHLPDGKYWLDPNQGVIEDAFPAFCNFTAGGQTCIFPVKKSGKWAKTSSGKELFSAIETGFKVFVYEANPVQLKFLRILSRSASQIFTHDC---PQTKPS---LHLFGTNYKEFPSDHK---------ECQVGYRNTHTADKLEL------LPIKDFSMSKTH-----KELQFDVGPVCFY 1514

HSP 2 Score: 63.5438 bits (153), Expect = 7.472e-10
Identity = 77/174 (44.25%), Postives = 94/174 (54.02%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            RG+ G  G+ GS GA G PG  G+ G  G +G+RG PGP G   S G  GE G  G  G+QG+ G  G  G  G+ GPAG  G  G  G+ G        G  G  G PGP GP G+RG PG       QG  GK+GP    G  GP+G+ G+ G  GP+G+ G NG+SG  GE
Sbjct:  473 RGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKG---SRGIAGEAGPDGPAGAQGKAGAKGTTGPNGEKGPAGLDGKNGINGEDGAP------GSDGAQGNPGPQGPTGTRGIPG------PQGKNGKMGP---TGPRGPSGKNGEPGPQGPEGEAGANGVSGPKGE 628

HSP 3 Score: 56.225 bits (134), Expect = 1.274e-7
Identity = 61/171 (35.67%), Postives = 71/171 (41.52%), Query Frame = 3

Query: 1464 DGDPGSLG---AMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            D D GS G    +G PG     G  G  G  G PG  G  G PGA G  G RG  G  G  G PG  G                             GE G  GPPG  G +G  G PG  G  G++G++G  GP G VG  G  G  G+ G PG DG+ G     G +G+
Sbjct:  230 DSDSGSEGPVRQLGKPGMDRAKGATGNTGLMGAPGAKGSSGVPGAQGMPGPRGSTGDAGAEGQPGPAGQR---------------------------GEAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIPGRDGRKGERAPDGANGQ 373

HSP 4 Score: 51.9878 bits (123), Expect = 2.115e-6
Identity = 76/218 (34.86%), Postives = 98/218 (44.95%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGP---RGERGYPGP---------NGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSE---------------GKLGPEGLVGN------------------LGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  GD G+ G  GP G++G +GR GP    G+RG PG           G  GS G  G +G  GK G +G+ G+PG  G  G+  P G  G  G  G  G  G  G    +G  G PGP GP+G RG PGV G  G +G++               G+ GP G+ G                   +GP G  G  G  GP G+ G++G  G  GE
Sbjct:  279 GPRGSTGDAGAEGQPGPAGQRGEAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIPGRDGRKGERAPDGANGQRGVTGPSGSPGPGGL---QGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGPRGIKGASGLQGGPGLQGPGGFKGPIGPTGLQGARGITGPQGETGSDGAQGAPGE 493

[Close]

BLAST of Fibrillar collagen vs. Ensembl Medaka
Match: col1a2 (collagen type I alpha 2 chain [Source:NCBI gene;Acc:105355091])

HSP 1 Score: 135.961 bits (341), Expect = 1.514e-31
Identity = 78/255 (30.59%), Postives = 124/255 (48.63%), Query Frame = 3

Query: 3561 GYMIIQADDP-LIAKYLGNDAISK-----------PLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISY---------------SLDQQ----QMTFLKMISNKASQFITINCRN----MPVIKNSVKPLRIFT-DNDIILDSS-DQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            GY   +AD P L AK    DA  K           P G+  +PAR+C  +   +P +  G YWIDPN G I+DA++V+C    ++TCI      I  +    NW+  + + K + +               +L  Q    Q+ F++++SN+ASQ IT +C+N    M     S+K   +    ND+ L +  +  F + VLED C  ++ + S T +E  T++P+RLPI DI    +++     +   +I  VCF
Sbjct: 1107 GYDEYRADQPTLRAKDYEVDATIKSLNTQIENLLTPEGSRKNPARTCRDIKLGHPEWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYSHPESIARK----NWYRSTENKKHVWFGETINGGTEFAYNDETLSPQSMATQLAFMRLLSNQASQNITYHCKNSIAYMDGESGSLKKAVLLQGSNDVELRADGNSRFIFSVLEDGCTRHTGEWSKTVIEYRTNKPSRLPILDIA--PLDIGEADQEFGLDIGPVCF 1355

HSP 2 Score: 65.4698 bits (158), Expect = 4.527e-10
Identity = 74/187 (39.57%), Postives = 87/187 (46.52%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGS---------------------QGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNG 1946
            G  G+ G PG  G +GPPG  G +G+DGPRG RG PGP G  G  G +G  G  G+ GS                     QG  GL G  GD                  RG  G  G +GE G  GPPG  GP   RG PG +G PG  G +G+ G +G  GN GP G+PG  G  G  G+PG  G
Sbjct:  784 GAAGRVGAPGQAGIVGPPGLAGPAGKDGPRGLRGDPGPAGPSGEQGMVGPPGVSGEKGSPGEPGPAGAPGPPGTTGPLGLQGFVGLSGARGD------------------RGTPGAAGAVGEPGRAGPPGAAGP---RGPPGNIGMPGMSGPQGEAGRDGNPGNDGPPGRPGAAGFKGDRGEPGPAG 949

[Close]

BLAST of Fibrillar collagen vs. Ensembl Medaka
Match: col2a1a (collagen alpha-1(II) chain [Source:NCBI gene;Acc:100529192])

HSP 1 Score: 134.035 bits (336), Expect = 5.146e-31
Identity = 76/253 (30.04%), Postives = 121/253 (47.83%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDN-------------KFISYSLD-------QQQMTFLKMISNKASQFITINCRNM-----PVIKNSVKPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A+ S RQ     ++ D  L +     + +  P GT  +PAR+C  L   +P +  G +WIDPN G   DA++V+C ++  +TC+ P + K+    PK NW+S  + N                SY  D         Q+ FL+++S +ASQ +T +C+N          N  K L +   ND+ I    +  F+Y V+ED C+ +S   S+T  E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1177 ASNSLRQH---DVEVDSTLKSLNSQIENMRSPDGTQKNPARTCRDLKLCHPEWKSGDFWIDPNLGCTADAIKVFCNMETGETCVYPRISKV----PKKNWWSSKSKNLKHIWFGETISGGFHFSYGQDGPIPNSANIQLNFLRLLSTEASQNLTYHCKNSIAYMDQATGNLKKALVLQGSNDVEIRAEGNSRFTYSVMEDGCKRHSGRWSNTVFEYKTMKTSRLPIVDIA--PMDIGGADQEFGVDIGPVCFL 1420

HSP 2 Score: 53.9138 bits (128), Expect = 1.392e-6
Identity = 86/224 (38.39%), Postives = 99/224 (44.20%), Query Frame = 3

Query: 1458 GKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------------------------------PLGPQGSRGKPGVVGKPGQQGSEGKLG---PEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G DG PG+ G +G  G++G SG  GP+G  G PGP G  G     G  G RG  G+ G TG PG  G  G PGP G  GP GP G  G  G     G +GD GPPG                              P GPQG  G  G+VG PGQ+G  G  G   P G  G  G                      AG+PG+EGTPG DG PG +G +G  GE
Sbjct:  773 GADGQPGAKGELGESGQKGESGAPGPQGPSGAPGPVGPTG---VSGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGPAGPAGAAGKDGPK---GTRGDAGPPGRPGDAGLRGPAGPPGEKGEPGEEGKPGTDGPPGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGPAGEPGREGTPGSDGPPGRDGATGIKGE 990

[Close]

BLAST of Fibrillar collagen vs. Ensembl Medaka
Match: col2a1a (collagen type II A [Source:NCBI gene;Acc:100682394])

HSP 1 Score: 131.724 bits (330), Expect = 2.808e-30
Identity = 65/224 (29.02%), Postives = 108/224 (48.21%), Query Frame = 3

Query: 3621 ISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQ-------------------QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPT-RLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            I  P G+  +PAR+C  L   +P +  G YWIDPN G   DA++V+C ++  ++C+ P    I    P+ NW+S  + NK + +                        QM FL+++S +ASQ +T +C+N     ++      K L +   ND+ I    +  F+Y V+ED+C  ++     T +E  S+ T RLPI DI    +++     +   ++  VCF 
Sbjct: 1204 IRSPEGSKKNPARTCRDLKLCHPDWKSGDYWIDPNQGCTVDAIKVFCNMETGESCVYPNPSSI----PRKNWWSSKSRNKHVWFGETMNGGFHFNYGDDSLAPNTAAIQMNFLRLLSTEASQNLTYHCKNSVAYMDASTGNLKKALLLQGSNDVEIRAEGNSRFTYSVMEDSCTEHTGKWGKTVMEYRSQKTSRLPIVDIA--PMDIGGADQEFGVDVGPVCFL 1421

HSP 2 Score: 65.0846 bits (157), Expect = 6.050e-10
Identity = 88/206 (42.72%), Postives = 103/206 (50.00%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGP---------------------------PGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPP------GPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RGL G+ G PGS GA G                            PG +G +G  G RG  G  GP G+ G+PG+ G  G  G  G+    G+PG  G  G PG AG  G PGPRG  GP G  G LG KG +G P      G  GP+G  G PG+ G PG QG EGK GP G  G  GP G PG+ G PG  G PG +GL+G+ G
Sbjct:  260 RGLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTD---GIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIAGFKGEAGPKGEIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGQKG 462

HSP 3 Score: 57.3806 bits (137), Expect = 1.321e-7
Identity = 75/230 (32.61%), Postives = 90/230 (39.13%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEI---------------------------------GQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLG------------------------PAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G KG+ G PG  G  G PG  G +G  GP+G RG  GP G  G PGA G +                                 G++G  G +G  G PG  GD                            GE G NGP GP GPQG  G+ G+VG PGQ+G  G  G  G  G  G                        PAG+PG+EG PG DG PG +G +G  G+
Sbjct:  789 GQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPGEKGD---------------------------AGEDGPNGPSGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGPGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSAGIKGD 991

HSP 4 Score: 56.225 bits (134), Expect = 3.125e-7
Identity = 69/188 (36.70%), Postives = 86/188 (45.74%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGS---------------RGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G+PG+ G +GPPG +G  G       RG+PG +G  G  GA GE G  G  G++G TG PG  G+ G PG  G                    G  GD GP G +GP G+               RG+PGV+G PG +G+                G+PGK G  G  G PG  GL GKDGE
Sbjct:  423 GKRGPRGEPGAAGPLGPPGERGAPG------NRGFPGQDGLAGQKGAPGERGPPGASGAKGATGDPGRPGESGLPGARGL------------------TGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGA---------------TGEPGKSGEKGLLGAPGLRGLPGKDGE 571

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BLAST of Fibrillar collagen vs. Ensembl Medaka
Match: col2a1a (collagen alpha-1(II) chain [Source:NCBI gene;Acc:100529192])

HSP 1 Score: 131.724 bits (330), Expect = 3.346e-30
Identity = 75/253 (29.64%), Postives = 121/253 (47.83%), Query Frame = 3

Query: 3537 ATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDN-------------KFISYSLD-------QQQMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            A+ S RQ     ++ D  L +     + +  P GT  +PAR+C  L   +P +  G +WIDPN G   DA++V+C ++  +TC+ P + K+    PK NW+S  + N                SY  D         Q+ FL+++S +ASQ +T +C+N     +       K L +   ND+ I    +  F+Y V+ED C+ +S   S+T  E  T + +RLPI DI    +++     +   +I  VCF 
Sbjct: 1246 ASNSLRQH---DVEVDSTLKSLNSQIENMRSPDGTQKNPARTCRDLKLCHPEWKSGDFWIDPNLGCTADAIKVFCNMETGETCVYPRISKV----PKKNWWSSKSKNLKHIWFGETISGGFHFSYGQDGPIPNSANIQLNFLRLLSTEASQNLTYHCKNSIAYMDQATGNLKKALVLQGSNDVEIRAEGNSRFTYSVMEDGCKRHSGRWSNTVFEYKTMKTSRLPIVDIA--PMDIGGADQEFGVDIGPVCFL 1489

HSP 2 Score: 55.0694 bits (131), Expect = 7.773e-7
Identity = 86/224 (38.39%), Postives = 99/224 (44.20%), Query Frame = 3

Query: 1458 GKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPG------------------------------PLGPQGSRGKPGVVGKPGQQGSEGKLG---PEGLVGNLGP---------------------AGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G DG PG+ G +G  G++G SG  GP+G  G PGP G  G     G  G RG  G+ G TG PG  G  G PGP G  GP GP G  G  G     G +GD GPPG                              P GPQG  G  G+VG PGQ+G  G  G   P G  G  G                      AG+PG+EGTPG DG PG +G +G  GE
Sbjct:  842 GADGQPGAKGELGESGQKGESGAPGPQGPSGAPGPVGPTG---VSGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGPAGPAGAAGKDGPK---GTRGDAGPPGRPGDAGLRGPAGPPGEKGEPGEEGKPGTDGPPGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGPAGEPGREGTPGSDGPPGRDGATGIKGE 1059

[Close]

BLAST of Fibrillar collagen vs. Ensembl Medaka
Match: col1 (collagen type I alpha 1 [Source:NCBI gene;Acc:100144368])

HSP 1 Score: 131.339 bits (329), Expect = 3.665e-30
Identity = 68/238 (28.57%), Postives = 121/238 (50.84%), Query Frame = 3

Query: 3573 IQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKI---------QLQKPKFNWFSQSNDNKF-ISY----SLDQQ---QMTFLKMISNKASQFITINCRNMPVIKNSV-----KPLRIFTDNDI-ILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEI-TSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            ++ D  L +     + I  P GT  +PAR+C  L   +P +  G YWIDP+ G   DA++VYC ++  +TC+ P   ++          +++ K  WF ++ ++ F   Y    SL +    Q+TFL+++S +ASQ +T +C+N     ++      K L +   N+I I    +  F+Y VLED C  ++     T ++  TS+ +RLPI  I++  +++ +   +    +  VCF 
Sbjct: 1211 LEVDSTLKSLSQQIEQIRSPDGTRKNPARTCRDLKMCHPDWKSGEYWIDPDQGCTQDAIKVYCNMETGETCVSPTQREVAQKNWYISKNIKEKKHVWFGETMNDGFQFEYGSEGSLPEDVNIQLTFLRLMSTEASQNLTYHCKNSVAYMDAAAGNLKKALLLQGSNEIEIRAEGNSRFTYSVLEDGCTSHTGTWGKTVIDYKTSKTSRLPI--IDIAPMDIGAPDQEFGLEVGPVCFL 1446

HSP 2 Score: 75.485 bits (184), Expect = 4.443e-13
Identity = 78/180 (43.33%), Postives = 99/180 (55.00%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGA---MGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEG---KLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            RG +G+ G PG+ GA    G PG +G  G DGP G +G PG   + G+PG +G  G  G+ G  GE GLPG  G              G  G  GP G  G  G  G +G PGP G  G+RG+PGV+G PG +G+ G   K G  G++G  GPAG PGK+G  GP G  G +G +G+ GE
Sbjct:  452 RGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPG---ERGAPGLVGPKGSTGEPGRTGEPGLPGAKG------------MTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGE 616

HSP 3 Score: 62.3882 bits (150), Expect = 3.794e-9
Identity = 80/179 (44.69%), Postives = 90/179 (50.28%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPD------GKPGTNGLSGKDG 1964
            RG  G DG  G+ GA   PG +G  G  GP+G  G PG  G+ G PGA G  G  G  G  G+TG  G  G  G+PGP G +G  G  G  G  G  G  G+ G  G  G +GP G  G PG  G  G QG  G  GP G  G  GPAG PG +G PGP       GKPG  GL G  G
Sbjct:  476 RGFPGSDGPAGAKGA---PGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAG 651

HSP 4 Score: 58.5362 bits (140), Expect = 5.510e-8
Identity = 72/173 (41.62%), Postives = 87/173 (50.29%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G+PG  G  G PG  G  G  G RG+RG+PG   + G+PG +G  G RG  GS G  G  G+ G             PG  G +GP G  G  GE+G  G PG  G +G +G  G  G PG+ G+ G  GP GL    GPAG PG +G PG  G  G  G  G  GE
Sbjct:  630 GPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPG---ERGAPGPVGPAGARGSPGSAGNDGAKGDAG------------APGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLP---GPAGAPGDKGEPGAAGPVGPAGARGAPGE 784

HSP 5 Score: 57.7658 bits (138), Expect = 9.948e-8
Identity = 75/175 (42.86%), Postives = 92/175 (52.57%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDG---PRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G KG  G+PG  G  G PG +G++G  G   P G+ G  G  GQDG PG  G +G RG+ G  G  G  G  GD G+PG  G MGP GP G           G+ GD+GP GP GP G  G+ G  G  G  G +G  GP+G +G     G+PG++G PG  G PG  G  G  G
Sbjct:  501 GPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAP---------GKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGE---PGKPGEQGLPGDAGAPGLTGARGDRG 663

HSP 6 Score: 57.3806 bits (137), Expect = 1.229e-7
Identity = 65/176 (36.93%), Postives = 74/176 (42.05%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDG---PRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            +G  G  G PG  G MGP G  G  G+DG   P+G  G  GP G+ G  G  G  G +G  G QG  G PG  G+                            G  GD G PG  G +G RG PG  G PG  G  G  G  G  GN G  G  G  G PG  G PG  G+ G+ G
Sbjct:  569 KGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQ---------------------------GLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERG 717

HSP 7 Score: 56.9954 bits (136), Expect = 1.736e-7
Identity = 71/176 (40.34%), Postives = 86/176 (48.86%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGP---PGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            RG  G+ G PG +G  G  G  G +G DG +G+ G P      G+PGA G  G +G  G +G  GLPG  GD G  G  G  G PG              G +G  GP   PGP G  G +G+PG  G  G  G+ G  G  G  G  GPA   G  G PG DG+PG  G SG++G
Sbjct:  662 RGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAP------GAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKD------------GARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPA---GFAGPPGSDGQPGAKGESGENG 816

HSP 8 Score: 52.7582 bits (125), Expect = 3.330e-6
Identity = 79/197 (40.10%), Postives = 93/197 (47.21%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVG---------------------KPGQQGSEGKLGPEGLVGNLGPAGQP---GKEGTPGPDGKPGTNGLSGKDG 1964
            RGL G  G PG  GA G  G  G +G  GP G RG PG  G+ G PG        G  G  G  G PG  G+ G+ G  G  GPPGP G  G  G  G +G  G  G  GP GP G+ G PG  G                     K G +G+ G+ GP G  G +G AG P   G++G+PG DG PG+ GL G  G
Sbjct:  746 RGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPA------GFAGPPGSDGQPGAKGESGENGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAGKEGPKGNRGETGPAGRPGEVGAAGPPGPSGEKGSPGADGAPGSAGLPGPQG 936

[Close]

BLAST of Fibrillar collagen vs. Planmine SMEST
Match: SMESG000038928.1 (SMESG000038928.1)

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 339/341 (99.41%), Postives = 340/341 (99.71%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 4214
            HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNGIPGYSGPRGPSGSKGPIGNPG TGEQGFQGDRGPNGN+GAQGIDGAQGPLGPQGPNGPPGPPGPPGVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY
Sbjct:  952 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNGIPGYSGPRGPSGSKGPIGNPGPTGEQGFQGDRGPNGNVGAQGIDGAQGPLGPQGPNGPPGPPGPPGVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY 1292

HSP 2 Score: 299.286 bits (765), Expect = 6.421e-83
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 3

Query:  993 YAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNEGKIXXXXXXXXXXXXXLIGEIXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIGQKGETGINGL 2093
            YAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGKIGPVGPAGSPGSPGLIGEIGERGENGPFGNPGPQGPRGLRGSAGPKGVSGPVGPPGMPGNPGIDGMPGIRGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDPGQPGPAGPMGPPGPRGQRGPTGNPGNLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGEDGDSGPVGAPGADGPQGPKGKDGPPGFPGLIGQKGETGINGL
Sbjct:  219 YAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGKIGPVGPAGSPGSPGLIGEIGERGENGPFGNPGPQGPRGLRGSAGPKGVSGPVGPPGMPGNPGIDGMPGIRGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDPGQPGPAGPMGPPGPRGQRGPTGNPGNLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGEDGDSGPVGAPGADGPQGPKGKDGPPGFPGLIGQKGETGINGL 585

HSP 3 Score: 164.851 bits (416), Expect = 1.186e-40
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 3

Query:  339 MIKNWIITLFIQILLVSLISAEPLRRLKRQSGVKGPDPQGRSMSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDGPQGVLGLIGPTGINGKPGVDGSIXXXXXXXXXXXXXXXXXXXMPGNQGPDGPSGSKGPVGEKGPDGPQGN 797
            MIKNWIITLFIQILLVSLISAEPLRRLKRQSGVKGPDPQGRSMSLPGPRGPIGEQGPPGPPGPPGKPGPTGPLGPDGVPGKDGPQGVLGLIGPTGINGKPGVDGSIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGPQGN
Sbjct:    1 MIKNWIITLFIQILLVSLISAEPLRRLKRQSGVKGPDPQGRSMSLPGPRGPIGEQGPPGPPGPPGKPGPTGPLGPDGVPGKDGPQGVLGLIGPTGINGKPGVDGSIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGPQGN 153

HSP 4 Score: 108.612 bits (270), Expect = 2.510e-23
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 3

Query: 2346 MNGLQGPTGLSGNPGKQGPPGEAXXXXXXXXXXXXXXXXXXXEDGNLGPIXXXXXXXXXXXXXXXXXXXXXXXXXXNGLPGQNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGP 2690
            MNGLQGPTGLSGNPGKQGPPGEAGPDGLLGPMGPPGKDGKPGEDGNLGPIGKTGKVGKDGPPGPPGPTGDVGPIGPNGLPGQNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGP
Sbjct:  670 MNGLQGPTGLSGNPGKQGPPGEAGPDGLLGPMGPPGKDGKPGEDGNLGPIGKTGKVGKDGPPGPPGPTGDVGPIGPNGLPGQNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGP 784

HSP 5 Score: 57.7658 bits (138), Expect = 7.062e-8
Identity = 77/185 (41.62%), Postives = 92/185 (49.73%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLG------PEGLVGNLGPAGQPGKEGTPGP------DGKPGTNGLSGKDGE 1967
            G+KG  G  G LG+ G PG  GV+G  GP G+ G  G  G+DG  G  GE G  G LG QG +G PG  G  G PGP                      G KG+ G  GP+GP GS G PG++G+ G++G  G  G      P GL G+ GP G  G  G PG       DG PG  GL GKDG+
Sbjct:  215 GVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQ---------------------GSKGNEGKIGPVGPAGSPGSPGLIGEIGERGENGPFGNPGPQGPRGLRGSAGPKGVSGPVGPPGMPGNPGIDGMPGIRGLKGKDGD 378

HSP 6 Score: 56.9954 bits (136), Expect = 1.436e-7
Identity = 83/187 (44.39%), Postives = 97/187 (51.87%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGV---SGRDGPRGERGYPGPNGQDGSPGAIGE------------IGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G +G  GD G LG  GPPG +G    SGR GP+G RG     G DG PG  G             +G  G  G  G+ G+ G+ GDPG PG  G  GP G  G  G  G  G +G KG+NGP G LGPQG  G PG+ G  G  G +G  G EG +G +GPAG PG  G  G  G+ G NG  G  G
Sbjct:  149 GPQGNSGDIGVLGLPGPPGHKGAPGPSGRQGPQGPRGL---QGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGKIGPVGPAGSPGSPGLIGEIGERGENGPFGNPG 332

HSP 7 Score: 51.6026 bits (122), Expect = 5.199e-6
Identity = 72/187 (38.50%), Postives = 84/187 (44.92%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETG---LPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKP------------GQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDG 1964
            G+ GK G  GS+GA GP G  G SG  GP G  G  GP+G  GS G +GE G  G  G+ G+ G   LPG  G  G P                        G  G  GP GP G QG  G PG  G              G  G +G  G +G++G+ G  G PG  G PGP G+PG  G  GKDG
Sbjct:   95 GINGKPGVDGSIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGPQGNSGDIGVLGLPGPPGHKGAP------------------------GPSGRQGPQGPRGLQGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDG 257

[Close]

BLAST of Fibrillar collagen vs. Planmine SMEST
Match: SMESG000026651.1 (SMESG000026651.1)

HSP 1 Score: 205.297 bits (521), Expect = 4.029e-53
Identity = 138/350 (39.43%), Postives = 200/350 (57.14%), Query Frame = 3

Query: 3210 LNAKDGEEGA------PGKQGPRGDKGFTGEIG---PDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQK-------PKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            LN KDG++GA      PGK G  G  G+ G +G     GK GV+G PG  G  G +GP G  G +G +   G TG +GF G+ G  G +G  G DG  G  GP G  GPPGPPGPP V       +  ++   DD L  KYLG+D + KPLGT + PAR+C  L + NP+  DG Y+IDPNGGK DDA +V C+ + K++CI+P     +L+           +WF +        Y ++  Q+ FLK+ S  A Q ITINC  + V+ NS  P+ +++D+D  +  +  +F Y V+ D C+++++ + ST LE+ +   RLPI+DI ++T + + E+ Q   +I +VCF
Sbjct:  969 LNGKDGKDGAAGRPGSPGKPGTIGHPGWMGTVGNPGARGKSGVRGDPGDRGPNGNNGPPGEPGVQGSV---GPTGTKGFPGENGSPGPVGMPGRDGPAGLPGPVGNTGPPGPPGPPAVFFPVRTVRRDLL--NDDALAVKYLGSDVVKKPLGTKDIPARTCKQLLDANPNLQDGFYYIDPNGGKADDAFRVLCRSQRKESCIEPKSPSYKLKHWDASDVTEYRSWFGEITGTFKFDYQIEASQLMFLKLFSTNARQRITINCSRLSVVGNSEHPVILYSDHDEEVLRNGDLFKYSVIRDGCKNSAEIIDSTELEMDTEAIRLPIRDIALNTGSSK-EQQQFGLDIGQVCF 1312

HSP 2 Score: 67.3958 bits (163), Expect = 8.512e-11
Identity = 86/200 (43.00%), Postives = 104/200 (52.00%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP---------NGQDGSPGAIG---EIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G PG +G  G PG QG+SGR G +GE G  GP          G+ GS G +G    IGQ G  GS G+ G PG  GDPG+ G  GP G  G  G+ G  G                 G LG KGD GP GP G  G RG PGV+G  G QG  G  GP+G++G+ GP G+ G +G+ G  G  G  G  GKDG+
Sbjct:  184 GRRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKGSIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPGKTGNPGRSGRRGPRGPRGNRGIIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGSPGPRGRTGSKGSQGTIGIAGVPGTPGKDGK 383

HSP 3 Score: 60.077 bits (144), Expect = 1.715e-8
Identity = 80/191 (41.88%), Postives = 94/191 (49.21%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIG---------------EIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGK---EGTPGPDGKPGTNGLSGKDGE 1967
            G  GKDG PG  G  G PG+    G  GP GERG PG +G DG PG +G                 GQRG  GS G +G  GN G  G  G  G  G  G  G +GP G  G+LG  G+ GP G +G  G RG  G  G PG+ G  GK   +G  GN+GP G  G+   +G  G  G PG+ GL G  G 
Sbjct:  409 GHPGKDGKPGPAGFPGTPGKNMQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGS 599

HSP 4 Score: 59.6918 bits (143), Expect = 2.082e-8
Identity = 65/172 (37.79%), Postives = 83/172 (48.26%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---DGKPGTNGLSG 1955
            GLKG+ G  G  G++GPPGR G  G  GP+G  G PG     G+ G++GEIG  G++G  G +G PG                                    D+G  GP+GP+GS G PG  G PG +G +G+ GP G +G  G  G PG  G PG    DGK G  G+ G
Sbjct:  713 GLKGERGPNGIDGSIGPPGRNGAPGAVGPQGLIGLPG---TPGTTGSVGEIGPPGQIGPNGNSGKPG------------------------------------DDGKVGPIGPRGSIGLPGPSGVPGIRGQQGRDGPRGEIGLNGDPGLPGDIGMPGASGSDGKAGEPGIRG 845

HSP 5 Score: 55.0694 bits (131), Expect = 5.517e-7
Identity = 68/185 (36.76%), Postives = 81/185 (43.78%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP------NGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKE------GTPGPDGKPGTNGLSGKDGE 1967
            G  GK+GDPG     GP G  G++G  GP G  G  GP       GQ G  G  G +G RG LG QG TG PG                                  +G  G PGP+G  G  G  G+ G+PG QG  G  GP GL G  GP G+ G +      G+ G DG PG++G  G  GE
Sbjct:  115 GKPGKNGDPG---PQGPTGEPGINGPTGPTGVPGMKGPLGVKGDKGQRGRMGKDGILGPRGNLGPQGPTGAPG---------------------------------RRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKGSIGQDGYPGSDGKRGAPGE 263

HSP 6 Score: 53.9138 bits (128), Expect = 1.273e-6
Identity = 71/204 (34.80%), Postives = 92/204 (45.10%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQ------DGSPGAIGEIGQRGKLGSQGETGL---PGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK------------LGPEGLVGNLGPA-------------GQPGKEGTPGPDGKPGTNGLSG 1955
            +G +G++GD G+ G  GP G  G +G  G  G  G PG +G+      DG+ G IG IG  G+ G QG TG+   PG++G                             G+ G  GP G +G  G  GKPG+VG PG +G +G             +GP+GL G  G A             GQ G  G PGP GKPGT+G  G
Sbjct:  513 QGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIG---------------------------LKGDIGSTGPMGRIGVPGIPGKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSGGQSGPRGKPGPSGKPGTSGPKG 689

[Close]

BLAST of Fibrillar collagen vs. Planmine SMEST
Match: SMESG000026651.1 (SMESG000026651.1)

HSP 1 Score: 205.297 bits (521), Expect = 4.624e-53
Identity = 138/350 (39.43%), Postives = 200/350 (57.14%), Query Frame = 3

Query: 3210 LNAKDGEEGA------PGKQGPRGDKGFTGEIG---PDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQK-------PKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            LN KDG++GA      PGK G  G  G+ G +G     GK GV+G PG  G  G +GP G  G +G +   G TG +GF G+ G  G +G  G DG  G  GP G  GPPGPPGPP V       +  ++   DD L  KYLG+D + KPLGT + PAR+C  L + NP+  DG Y+IDPNGGK DDA +V C+ + K++CI+P     +L+           +WF +        Y ++  Q+ FLK+ S  A Q ITINC  + V+ NS  P+ +++D+D  +  +  +F Y V+ D C+++++ + ST LE+ +   RLPI+DI ++T + + E+ Q   +I +VCF
Sbjct:  974 LNGKDGKDGAAGRPGSPGKPGTIGHPGWMGTVGNPGARGKSGVRGDPGDRGPNGNNGPPGEPGVQGSV---GPTGTKGFPGENGSPGPVGMPGRDGPAGLPGPVGNTGPPGPPGPPAVFFPVRTVRRDLL--NDDALAVKYLGSDVVKKPLGTKDIPARTCKQLLDANPNLQDGFYYIDPNGGKADDAFRVLCRSQRKESCIEPKSPSYKLKHWDASDVTEYRSWFGEITGTFKFDYQIEASQLMFLKLFSTNARQRITINCSRLSVVGNSEHPVILYSDHDEEVLRNGDLFKYSVIRDGCKNSAEIIDSTELEMDTEAIRLPIRDIALNTGSSK-EQQQFGLDIGQVCF 1317

HSP 2 Score: 67.3958 bits (163), Expect = 7.963e-11
Identity = 86/200 (43.00%), Postives = 104/200 (52.00%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP---------NGQDGSPGAIG---EIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G +G  G PG +G  G PG QG+SGR G +GE G  GP          G+ GS G +G    IGQ G  GS G+ G PG  GDPG+ G  GP G  G  G+ G  G                 G LG KGD GP GP G  G RG PGV+G  G QG  G  GP+G++G+ GP G+ G +G+ G  G  G  G  GKDG+
Sbjct:  189 GRRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKGSIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPGKTGNPGRSGRRGPRGPRGNRGIIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGSPGPRGRTGSKGSQGTIGIAGVPGTPGKDGK 388

HSP 3 Score: 60.077 bits (144), Expect = 1.618e-8
Identity = 80/191 (41.88%), Postives = 94/191 (49.21%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIG---------------EIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGK---EGTPGPDGKPGTNGLSGKDGE 1967
            G  GKDG PG  G  G PG+    G  GP GERG PG +G DG PG +G                 GQRG  GS G +G  GN G  G  G  G  G  G  G +GP G  G+LG  G+ GP G +G  G RG  G  G PG+ G  GK   +G  GN+GP G  G+   +G  G  G PG+ GL G  G 
Sbjct:  414 GHPGKDGKPGPAGFPGTPGKNMQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGS 604

HSP 4 Score: 59.6918 bits (143), Expect = 2.138e-8
Identity = 65/172 (37.79%), Postives = 83/172 (48.26%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGP---DGKPGTNGLSG 1955
            GLKG+ G  G  G++GPPGR G  G  GP+G  G PG     G+ G++GEIG  G++G  G +G PG                                    D+G  GP+GP+GS G PG  G PG +G +G+ GP G +G  G  G PG  G PG    DGK G  G+ G
Sbjct:  718 GLKGERGPNGIDGSIGPPGRNGAPGAVGPQGLIGLPG---TPGTTGSVGEIGPPGQIGPNGNSGKPG------------------------------------DDGKVGPIGPRGSIGLPGPSGVPGIRGQQGRDGPRGEIGLNGDPGLPGDIGMPGASGSDGKAGEPGIRG 850

HSP 5 Score: 55.0694 bits (131), Expect = 5.808e-7
Identity = 68/185 (36.76%), Postives = 81/185 (43.78%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP------NGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKE------GTPGPDGKPGTNGLSGKDGE 1967
            G  GK+GDPG     GP G  G++G  GP G  G  GP       GQ G  G  G +G RG LG QG TG PG                                  +G  G PGP+G  G  G  G+ G+PG QG  G  GP GL G  GP G+ G +      G+ G DG PG++G  G  GE
Sbjct:  120 GKPGKNGDPG---PQGPTGEPGINGPTGPTGVPGMKGPLGVKGDKGQRGRMGKDGILGPRGNLGPQGPTGAPG---------------------------------RRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKGSIGQDGYPGSDGKRGAPGE 268

HSP 6 Score: 53.9138 bits (128), Expect = 1.211e-6
Identity = 71/204 (34.80%), Postives = 92/204 (45.10%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQ------DGSPGAIGEIGQRGKLGSQGETGL---PGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGK------------LGPEGLVGNLGPA-------------GQPGKEGTPGPDGKPGTNGLSG 1955
            +G +G++GD G+ G  GP G  G +G  G  G  G PG +G+      DG+ G IG IG  G+ G QG TG+   PG++G                             G+ G  GP G +G  G  GKPG+VG PG +G +G             +GP+GL G  G A             GQ G  G PGP GKPGT+G  G
Sbjct:  518 QGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIG---------------------------LKGDIGSTGPMGRIGVPGIPGKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSGGQSGPRGKPGPSGKPGTSGPKG 694

[Close]

BLAST of Fibrillar collagen vs. Planmine SMEST
Match: SMESG000031448.1 (SMESG000031448.1)

HSP 1 Score: 202.601 bits (514), Expect = 2.573e-52
Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 3

Query: 3534 VATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPK------FNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPVIKNS-----VKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
            +  M  R     +   DDPL A+ LGN+AI  P GT   PA +C  L+  +P+ PDG YWIDPNGG+++DAV+VYC+I E+KTCIKP+  +I L+  K        W     + + I YS+   Q+ FLK+ S+ A Q +T  C N P+I N      V   R+  D+D I+  +     Y V++D CQ++    + + +E+ +    LPI+DI V  +N R  +S+    IEEVCF
Sbjct: 1035 IMAMQMRSPTKGVTYGDDPLAAELLGNNAIKNPEGTKEVPAITCKQLSVKHPNLPDGEYWIDPNGGRVNDAVKVYCRISEQKTCIKPINNEISLRSWKSHSANGHTWLKSILNKEEIQYSIPNGQIAFLKVNSDSAVQRVTFTCENHPIIGNEEKLNKVTAPRLLADDDTIIKMTHSHLKYTVIKDECQYSKSSEAESIIEVRNYANLLPIRDIGVSIINNR--KSKFGVTIEEVCF 1269

HSP 2 Score: 55.8398 bits (133), Expect = 3.112e-7
Identity = 77/176 (43.75%), Postives = 94/176 (53.41%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGN---VGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            GL+G  G+PG  G +GP    G  G  GP G  G PG  G  G PG+ G++G  GK G  G+ G+ G+   +G+ G PG  GP G PGP G  G  G  G +G  G+ G  G  G  G  GKPG  G PG  G  G  GP G VGN+GP G  G +G PG  G PG  G +G  G+
Sbjct:  411 GLRGPQGNPGKDGTLGP---LGTPGLRGPPGSIGTPGLKGNIGPPGSKGKVGNAGKPGPLGKNGIDGSEGPIGNAGSPGFPGPNGDPGPNGPPGSLGLAGLVGYPGNQGLAGKNGNPGVEGKPGKAGTPGSPGKPGVPGPVGDVGNIGPPGPNGLKGAPGIYGVPGNYGPNGSPGD 583

[Close]

BLAST of Fibrillar collagen vs. Planmine SMEST
Match: SMESG000024244.1 (SMESG000024244.1)

HSP 1 Score: 199.134 bits (505), Expect = 4.114e-51
Identity = 137/361 (37.95%), Postives = 188/361 (52.08%), Query Frame = 3

Query: 3192 HPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNXXXXXXXXXXXXXXXXXXXNPGSTGEQGFQGDRGPNGNLGAQGIDGAQXXXXXXXXXXXXXXXXXXXVATMSNRQQGYMII--------QADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQKPKFNWFSQSND--NKFISYS-----------LDQQQMTFLKMISNKASQFITINCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCF 4211
             PG +G   KDG+ G  G+ G  G  G  G +GP G QG +GKPG              GS G  G+PG  G+QG  G +GP G  G  G+ G  G  G  GP+GP G  G  G           + I         +DD   A  LG+D IS PLGT + PARSC HL   +    DG Y+IDPNGGK++DA +V+CK++  +TCI P       ++  F+  S S +  NK+ISY            +D  Q+ FLKM+S +A+Q I I C NM V++ +  P  IFTDN+  L   D   SYKV++D CQ+ S + + T L ++    RLPI+D+   T+   S+ S+    + +VCF
Sbjct:  978 KPGKEGKPGKDGKTGPVGEPGHPGWMGPQGLLGPPGPQGDRGKPG------------DPGSPGIEGSPGDVGDQGVPGPKGPTGPNGEMGLMGPMGVTGRDGPSGPHGLMGNAGPPGPPGPPAMMLPIIYDPNRPMYSDDANAANILGSDTISVPLGTKDLPARSCNHLKSTSSHLKDGTYFIDPNGGKVNDAFEVFCKMETGETCISP-------KQSSFSKISYSENPINKYISYGELSGIQRFDYVIDNTQLMFLKMVSTRANQEIKIACNNMAVVEKTEYPAIIFTDNNRELTKDDHHLSYKVIKDECQNMSSEEAETVLLVSGDSKRLPIRDL---TLGSDSDISEFRLKLSKVCF 1316

HSP 2 Score: 60.077 bits (144), Expect = 1.659e-8
Identity = 73/187 (39.04%), Postives = 90/187 (48.13%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGV---VGKPGQQGSEGKLGPEGLVGN---LGPAGQPGK---------EGTPGPDGKPGTNGLSGKDG 1964
            G+ G  GD G  G +GP G+ G  G DG  G +G PG +G+DG  G  G++G  G  G  G  G PG  G                       G  G  G+ G  GP GP GP+GS G PG+   +GKPGQ+G  G  GP+GL GN    GP G  GK         +G PGPDG  G+ G  G+ G
Sbjct:  773 GMSGPQGDDGLDGNVGPEGKPGNPGLDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPGETGMNGTPGRDG---------------------RPGVAGMRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGPKGLTGNQGITGPMGNTGKPGAAGKTGGKGLPGPDGPSGSVGRRGESG 938

HSP 3 Score: 58.151 bits (139), Expect = 6.195e-8
Identity = 78/179 (43.58%), Postives = 96/179 (53.63%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQG------SEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G  GK G PGS G +GPPG  G +G+ G     G PGP G  G PG  G  G+ G  GSQG  G  G VG  G  G  GP GPPG  G  G +      G +GD+G  G +GP+G  G PG+ G PG QG       +G+ G +G +G  G  G+ G  GTPG DG+PG  G+ G  G+
Sbjct:  686 GDAGKPGSPGSPGEIGPPGDIGPTGQSG---ALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSSGKVGPQGAKGKVGPQGPPGGPGSTGMS------GPQGDDGLDGNVGPEGKPGNPGLDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPGETGMNGTPGRDGRPGVAGMRGDTGQ 855

HSP 4 Score: 53.1434 bits (126), Expect = 1.770e-6
Identity = 78/174 (44.83%), Postives = 96/174 (55.17%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G +G  G  G +G  G  GR G+ G  G +G +G  GP G +G  G IG +G  G LG  G    PGN GDPG+ G  G  G PG +G +GP G PG  G  G +G  G  G  G+ GKPG  G  G QG  G  G +G+VG +G +GQPG    PGP GK G  GL+GK G 
Sbjct:  285 KGSQGGTGPQGIIGNAGATGRPGLDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGN---PGNRGDPGRIGTPGTRGIPGTKGSQGPNGPPGINGSPGADGRDGLPGIDGANGKPGSRGPRGSQGLAGLPGKDGVVGPVGLSGQPGANKPPGPQGKMGPRGLTGKPGS 455

HSP 5 Score: 52.373 bits (124), Expect = 3.091e-6
Identity = 83/204 (40.69%), Postives = 101/204 (49.51%), Query Frame = 3

Query: 1446 RGLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGP------NGQDGSPGAIGEIG---QRGKLGSQGETGLPGN---VGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPP---------------GPLGPQGSRGKPGVVG---KPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            +G  G  G PG  G  G PGR G  G  G RG+ G PGP       G  G+PG +G+IG   Q+GK G+ G  GL GN    G  G  G  G  G  G +G  GP G  G++G +G++G P               GP+GP G  G PG VG   KPG+ G EGK G +G  G +G  G PG  G  G  G PG  G  GK G+
Sbjct:  820 QGKLGVPGIPGETGMNGTPGRDGRPGVAGMRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGPKGLTGNQGITGPMGNTGKPGAAGKTGGKGLPGPDGPSGSVGRRGESGVPGKSGGFGSKGKKGAEGPVGPAGKEGLPGKVGPLGKPGKPGKEGKPGKDGKTGPVGEPGHPGWMGPQGLLGPPGPQGDRGKPGD 1023

HSP 6 Score: 50.8322 bits (120), Expect = 9.341e-6
Identity = 84/195 (43.08%), Postives = 100/195 (51.28%), Query Frame = 3

Query: 1449 GLKGKDGDPGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGS----------------PGAIGEIGQRGKLGSQGETGLPGNVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEKGDNGPPGP---LGPQGSRGKPGVVGKPGQQGSEGKLGPEG---LVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGE 1967
            G+ G  G  G  G MG  G+ G  G  GP G RG PG +G  G+                PG  G+ G+ G  GS GE G PG++G  GQ G  G  GP GP G  G  G  G LG  G  GP G    +GPQG++GK G  G PG  GS G  GP+G   L GN+GP G+PG  G  G  G  G  G+SG+DGE
Sbjct:  622 GMNGPPGPQGYKGTMGLSGKTGKVGSPGPPGNRGKPGSSGSTGNVQIAGRSSGGSGTKGKPGEDGDAGKPGSPGSPGEIGPPGDIGPTGQSGALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSSGKVGPQGAKGKVGPQGPPGGPGSTGMSGPQGDDGLDGNVGPEGKPGNPGLDGFPGNQGVPGVSGRDGE 816

The following BLAST results are available for this feature:

BLAST of Fibrillar collagen vs. Ensembl Human
BLAST of Fibrillar collagen vs. Ensembl Celegans
BLAST of Fibrillar collagen vs. Ensembl Fly
BLAST of Fibrillar collagen vs. Ensembl Zebrafish
BLAST of Fibrillar collagen vs. Ensembl Xenopus
BLAST of Fibrillar collagen vs. Ensembl Mouse
BLAST of Fibrillar collagen vs. UniProt/SwissProt
BLAST of Fibrillar collagen vs. TrEMBL
BLAST of Fibrillar collagen vs. Ensembl Cavefish
BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
BLAST of Fibrillar collagen vs. Ensembl Yeast
BLAST of Fibrillar collagen vs. Ensembl Nematostella
BLAST of Fibrillar collagen vs. Ensembl Medaka
BLAST of Fibrillar collagen vs. Planmine SMEST

BLAST of Fibrillar collagen vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
COL2A1	1.491e-30	30.23	collagen type II alpha 1 chain [Source:HGNC Symbol...	[more]
COL1A2	4.446e-30	29.78	collagen type I alpha 2 chain [Source:HGNC Symbol;...	[more]
COL1A2	5.131e-30	29.78	collagen type I alpha 2 chain [Source:HGNC Symbol;...	[more]
COL2A1	1.250e-29	30.23	collagen type II alpha 1 chain [Source:HGNC Symbol...	[more]
COL5A2	4.431e-29	32.00	collagen type V alpha 2 chain [Source:HGNC Symbol;...	[more]

BLAST of Fibrillar collagen vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col-135	2.426e-9	35.26	COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]	[more]
col-135	7.590e-9	37.43	COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]	[more]
col-60	1.922e-8	36.57	COLlagen [Source:UniProtKB/TrEMBL;Acc:Q19725]	[more]
emb-9	5.303e-7	40.00	Collagen alpha-1(IV) chain [Source:UniProtKB/Swis...	[more]
emb-9	5.814e-7	40.00	Collagen alpha-1(IV) chain [Source:UniProtKB/Swis...	[more]

BLAST of Fibrillar collagen vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Col4a1	8.994e-9	43.26	gene:FBgn0000299 transcript:FBtr0079003	[more]
Col4a1	8.994e-9	43.26	gene:FBgn0000299 transcript:FBtr0079002	[more]
Col4a1	8.994e-9	43.26	gene:FBgn0000299 transcript:FBtr0079001	[more]
vkg	1.101e-6	37.79	gene:FBgn0016075 transcript:FBtr0333541	[more]
vkg	1.101e-6	37.79	gene:FBgn0016075 transcript:FBtr0079036	[more]

BLAST of Fibrillar collagen vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col1a2	6.998e-33	32.35	collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GEN...	[more]
col2a1b	4.039e-32	32.44	collagen, type II, alpha 1b [Source:ZFIN;Acc:ZDB-G...	[more]
col2a1a	8.687e-32	30.12	collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-G...	[more]
col2a1a	4.503e-31	30.12	collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-G...	[more]
col2a1a	1.085e-30	30.12	collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-G...	[more]

BLAST of Fibrillar collagen vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col2a1	7.231e-31	31.08	collagen, type II, alpha 1 [Source:NCBI gene;Acc:3...	[more]
col1a2	1.996e-30	28.83	collagen type I alpha 2 [Source:NCBI gene;Acc:7801...	[more]
col2a1	3.680e-30	31.37	collagen, type II, alpha 1 [Source:NCBI gene;Acc:3...	[more]
col1a2	1.435e-29	28.83	collagen type I alpha 2 [Source:NCBI gene;Acc:7801...	[more]
col1a2	2.459e-29	28.83	collagen type I alpha 2 [Source:NCBI gene;Acc:7801...	[more]

BLAST of Fibrillar collagen vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Col5a2	3.789e-30	32.44	collagen, type V, alpha 2 [Source:MGI Symbol;Acc:M...	[more]
Col2a1	1.976e-29	29.71	collagen, type II, alpha 1 [Source:MGI Symbol;Acc:...	[more]
Col2a1	1.228e-28	29.71	collagen, type II, alpha 1 [Source:MGI Symbol;Acc:...	[more]
Col1a1	2.907e-26	28.22	collagen, type I, alpha 1 [Source:MGI Symbol;Acc:M...	[more]
Col3a1	9.635e-26	27.56	collagen, type III, alpha 1 [Source:MGI Symbol;Acc...	[more]

BLAST of Fibrillar collagen vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|B8V7R6\|COA_ACRMI	2.936e-32	32.90	Collagen alpha chain (Fragment) OS=Acropora millep...	[more]
sp\|O93484\|CO1A2_ONCMY	7.620e-31	29.34	Collagen alpha-2(I) chain OS=Oncorhynchus mykiss O...	[more]
sp\|Q3U962\|CO5A2_MOUSE	2.650e-29	32.44	Collagen alpha-2(V) chain OS=Mus musculus OX=10090...	[more]
sp\|O42350\|CO1A2_LITCT	3.779e-29	29.46	Collagen alpha-2(I) chain OS=Lithobates catesbeian...	[more]
sp\|P02459\|CO2A1_BOVIN	4.206e-29	32.16	Collagen alpha-1(II) chain OS=Bos taurus OX=9913 G...	[more]

BLAST of Fibrillar collagen vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0R3U1N0	2.784e-52	39.60	Fibrillar collagen NC1 domain-containing protein O...	[more]
A0A0X3PTQ4	7.502e-50	38.79	Fibrillar collagen NC1 domain-containing protein O...	[more]
W6UR32	1.241e-49	37.50	Collagen alpha-2(I) chain OS=Echinococcus granulos...	[more]
A0A0R3W2Y4	2.360e-49	38.06	Fibrillar collagen NC1 domain-containing protein O...	[more]
A0A183TBD1	3.265e-49	38.79	Fibrillar collagen NC1 domain-containing protein O...	[more]

BLAST of Fibrillar collagen vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col1a1a	6.892e-29	29.41	collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GE...	[more]
col27a1b	1.337e-21	28.53	collagen, type XXVII, alpha 1b [Source:NCBI gene;A...	[more]
col27a1b	2.328e-21	29.82	collagen, type XXVII, alpha 1b [Source:NCBI gene;A...	[more]
col5a1	8.705e-21	27.40	procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-...	[more]
ENSAMXT00000043273.1	2.010e-20	30.13	pep primary_assembly:Astyanax_mexicanus-2.0:13:424...	[more]

BLAST of Fibrillar collagen vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000003197.1	1.508e-29	29.03	pep scaffold:Pmarinus_7.0:GL479090:2162:37629:-1 g...	[more]
ENSPMAT00000001071.1	4.181e-29	30.67	pep scaffold:Pmarinus_7.0:GL476837:726:42204:1 gen...	[more]
ENSPMAT00000005318.1	6.387e-29	28.75	pep scaffold:Pmarinus_7.0:GL477895:43798:56979:-1 ...	[more]
ENSPMAT00000001576.1	1.473e-27	33.50	pep scaffold:Pmarinus_7.0:GL476350:400893:424819:1...	[more]
ENSPMAT00000009617.1	2.904e-24	29.47	pep scaffold:Pmarinus_7.0:GL476473:139194:170406:1...	[more]

BLAST of Fibrillar collagen vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Fibrillar collagen vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO42953	1.374e-33	33.06	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49401	8.849e-26	33.99	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49368	1.953e-24	29.66	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO44729	2.067e-23	28.25	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO44697	4.849e-22	28.57	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Fibrillar collagen vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col1a2	1.514e-31	30.59	collagen type I alpha 2 chain [Source:NCBI gene;Ac...	[more]
col2a1a	5.146e-31	30.04	collagen alpha-1(II) chain [Source:NCBI gene;Acc:1...	[more]
col2a1a	2.808e-30	29.02	collagen type II A [Source:NCBI gene;Acc:100682394...	[more]
col2a1a	3.346e-30	29.64	collagen alpha-1(II) chain [Source:NCBI gene;Acc:1...	[more]
col1	3.665e-30	28.57	collagen type I alpha 1 [Source:NCBI gene;Acc:1001...	[more]

BLAST of Fibrillar collagen vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000038928.1	6.421e-83	99.41	SMESG000038928.1	[more]
SMESG000026651.1	4.029e-53	39.43	SMESG000026651.1	[more]
SMESG000026651.1	4.624e-53	39.43	SMESG000026651.1	[more]
SMESG000031448.1	2.573e-52	38.40	SMESG000031448.1	[more]
SMESG000024244.1	4.114e-51	37.95	SMESG000024244.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30004485 ID=SMED30004485|Name=Fibrillar collagen|organism=Schmidtea mediterranea sexual|type=transcript|length=4391bp
TGTGTAATACATTCGAAAGGAAATGGAAATAAAGGTCACAGGAAAGTTTT
TCGTGTGCAAAATTGAATTATCTAACCTGCACAGCTTGCTGGGGAAAATG
TCAAAATGTGTGCAATTATTCGATCAATTGAAATTTTCTCAATATTTTTT
GTCTTTTATGGAATATTGCAGCACAACATATATTTAAAATTATAATATTA
AAATATTTTATTATCGAAAAGAATTTATTGAATTTTCTCGAATTGATCTG
AGACCAAGTTTATTGTCAACATTGAAAAGAATTTGTCTTTGATCAATTTT
GGAATTACAGATTCCATTATTTTCACAATTCATCAAAAATGATTAAAAAT
TGGATTATTACTTTATTCATTCAAATTCTGCTCGTGTCCTTAATATCAGC
GGAACCTTTAAGGAGGTTAAAACGTCAATCGGGTGTTAAAGGTCCAGATC
CCCAAGGTAGATCAATGTCATTACCAGGTCCTCGAGGTCCAATAGGTGAA
CAAGGTCCACCAGGACCTCCCGGTCCTCCAGGAAAGCCAGGACCAACTGG
ACCTTTGGGGCCGGATGGAGTACCAGGCAAAGATGGACCGCAAGGAGTGT
TAGGGTTAATTGGACCAACTGGTATAAATGGAAAGCCAGGAGTTGATGGA
TCAATTGGTGCTCCCGGACCAGTAGGTCCTGATGGGCCATCTGGACCAAC
AGGGCCAGTAGGAATGCCAGGAAATCAAGGACCGGATGGACCATCAGGGT
CAAAGGGTCCAGTTGGAGAAAAGGGACCTGATGGACCTCAAGGAAATCCT
GGTGATATCGGAGTTCTTGGATTACCTGGTCCACCTGGACACAAAGGTGC
ACCAGGACCGAGTGGACGACAAGGACCTCAAGGTCCACGTGGTTTGCAAG
GCGTTGATGGATTACCAGGACAACCAGGTCCTTTGGGTCCACAAGGAGTT
CCTGGACCACCAGGTATGATGGGTCCAACAGGAGTAAAGGGCTATGCTGG
AAAACAAGGTGTGTTGGGTAGTTCGGGAGATCCTGGAAGTCCAGGGGTAA
ATGGAGCTCCAGGACCTATTGGACAACCTGGAATAATGGGAAGTAGAGGA
AAAGATGGTCCTATTGGCATTAAAGGTGAAAACGGTCCATTGGGATTATT
AGGACCACAAGGTTTATCTGGCCCACCAGGATTACAAGGATCACTTGGGC
CACCAGGACCCCAAGGTTCTAAAGGAAATGAAGGAAAAATAGGGCCGGTT
GGCCCTGCTGGATCCCCTGGCTCACCTGGTTTAATTGGTGAAATTGGGGA
AAGAGGTGAAAATGGACCGTTTGGTAACCCTGGACCACAAGGGCCAAGAG
GATTACGTGGTTCTGCTGGACCTAAAGGTGTCAGTGGTCCGGTTGGTCCA
CCAGGCATGCCAGGAAATCCAGGAATAGATGGAATGCCTGGAATTCGTGG
ATTAAAAGGCAAAGATGGAGATCCTGGAAGTTTGGGGGCAATGGGCCCTC
CAGGACGGCAAGGAGTATCAGGAAGAGATGGGCCTCGTGGTGAAAGAGGA
TATCCAGGGCCAAATGGTCAAGATGGCTCTCCGGGAGCTATTGGAGAAAT
TGGTCAAAGAGGAAAACTTGGATCACAAGGAGAAACTGGATTGCCTGGAA
ATGTAGGTGATCCTGGCCAACCAGGACCAGCAGGACCTATGGGACCGCCG
GGACCACGAGGACAAAGAGGTCCTACCGGAAACCCTGGTAATCTTGGAGA
GAAAGGTGATAATGGGCCTCCAGGCCCTTTAGGACCTCAAGGCTCTCGAG
GAAAACCGGGTGTAGTAGGCAAACCGGGTCAACAGGGATCTGAAGGAAAA
TTAGGGCCTGAAGGTTTGGTTGGCAACCTTGGACCAGCTGGTCAACCAGG
AAAAGAAGGAACTCCAGGACCAGATGGTAAACCTGGAACAAATGGTCTTT
CTGGCAAAGATGGAGAAGATGGTGATTCTGGACCTGTTGGAGCTCCAGGT
GCAGATGGTCCACAGGGTCCAAAAGGAAAAGATGGTCCTCCTGGATTTCC
TGGATTAATTGGTCAAAAAGGAGAAACAGGCATTAATGGTTTACCAGGAA
GGAGAGGAATTTCAGGAATGCCTGGTATGCCTGGAAGTCCAGGGCCGGTA
GGGGTTCGTGGTAAAGTAGGTAAACCTGGTCCTCCTTCAAAGGACGGTCC
TCCTGGCCAAGCAGGACCTCAAGGGCCTCCTGGTTTAGATGGACCTCCAG
GTCCGGACGGTTCTGTAAAAATTTCCGGTCGATCAGGTGGTGGAAGAGGA
TCACCAGGTCCAAAAGGTCATAAAGGACAACCTGGGAAAAATGGAATGAA
TGGTTTACAAGGACCTACTGGTCTTAGTGGAAATCCTGGAAAACAAGGGC
CGCCTGGAGAGGCTGGACCTGATGGTTTACTTGGTCCAATGGGTCCACCA
GGAAAAGATGGGAAACCTGGTGAAGATGGTAATCTTGGCCCGATTGGAAA
AACTGGAAAAGTGGGAAAAGATGGTCCCCCCGGCCCACCAGGACCTACTG
GAGATGTTGGACCAATAGGCCCAAACGGGTTGCCTGGGCAAAATGGGAAG
CCTGGTAAAGCTGGACCATTGGGTCCTACAGGTCCAGTTGGACGCCCAGG
ATCAGATGGCATTAGAGGTCCCAATGGATTAAGAGGACCAACAGGAAAAA
GTGGTGCTGATGGTAAGAAAGGACCAGCTGGAGATGATGGTCCTCCGGGA
CCTCAGGGTGAAGCTGGTGATATGGGATCACCTGGCCAAGACGGACCTCC
TGGAAATCAAGGAAATCGTGGACCAGTAGGCAAACCTGGCCCTCTTGGTG
GCTCAGGACCTCTGGGGTCTCCTGGAATTCAAGGTCCTCCAGGAGCTGAA
GGAAAGGAAGGTCCACCAGGCCCTCAAGGTCCATTAGGTCCCCCAGGTCC
ACAGGGTTCAGATGGCCCAGTAGGAAATTCTGGATTAGATGGTATGGTAG
GTCAACCTGGACCACCTGGTCCATTAGGAGATCCCGGACCTGAAGGATTT
CCAGGTACCCCGGGTCCATTAGGAGTTAAAGGACCAATGGGTCCAATGGG
AGTTGGAGGATCAAGAGGTAAAGCAGGTGCAGTTGGAACTCCTGGACCAC
CAGGTCCCGAAGGTAAACAAGGTCCTGAGGGACCGCTAGGTCATCCAGGT
GATGATGGATTAAACGCAAAAGATGGAGAGGAAGGTGCTCCAGGAAAACA
GGGTCCTAGAGGTGATAAAGGATTTACAGGAGAAATAGGTCCTGATGGTA
AGCAAGGAGTAAAGGGAAAACCAGGTCCCAATGGTATTCCAGGATATTCT
GGTCCCCGTGGACCTTCAGGTAGTAAAGGACCTATAGGTAATCCAGGGTC
AACTGGTGAACAAGGATTTCAGGGAGATAGAGGACCGAATGGAAATTTAG
GAGCTCAAGGTATTGATGGTGCTCAAGGACCACTAGGTCCTCAAGGCCCT
AATGGTCCACCTGGTCCTCCAGGTCCTCCTGGAGTTGCAACTATGTCTAA
TAGGCAACAAGGGTACATGATTATTCAAGCTGATGATCCGTTAATTGCTA
AATACCTGGGCAATGATGCCATTTCCAAACCTTTGGGAACATCCAATTCA
CCAGCAAGGTCATGTTTACATTTAGCAGAAATGAATCCTTCATTTCCTGA
CGGTATATATTGGATAGATCCGAATGGAGGCAAAATCGACGATGCTGTTC
AAGTGTATTGCAAAATAAAAGAAAAGAAAACTTGTATAAAACCCTTAGTT
TTCAAAATACAATTACAGAAGCCAAAATTCAATTGGTTTTCTCAAAGCAA
TGATAATAAATTTATAAGCTATTCTTTGGATCAACAACAAATGACGTTTC
TCAAAATGATCAGTAACAAGGCATCCCAATTTATTACAATTAACTGCCGA
AATATGCCAGTCATAAAGAATTCGGTGAAGCCGTTGAGAATATTCACTGA
TAATGACATAATATTAGACAGTTCAGATCAGATATTTTCTTATAAAGTTT
TAGAAGACAATTGTCAACATAACTCACAAGATCTGAGTTCAACGCGGCTG
GAAATAACATCGCGACCTACACGGCTCCCTATTAAAGATATTGAAGTTGA
CACAGTGAACGTCCGGTCAGAAAGATCACAGATTGAATACAATATTGAAG
AAGTCTGCTTCTATTAACTGTCAATGTTGAAATTTGATTATTTGTTTGTT
TAAATGTGATTTTAGTTCGATAATTTGTGCAATTTCATTGATTTTATTCG
AATTAATCAATACTTTGAATTGATTGATCGATAATTTGTAAAGTAAAGTT
TCATTGAATAATATTGTATTTTATAATTCTTTTAAAAAAAA

protein sequence of SMED30004485-orf-1

>SMED30004485-orf-1 ID=SMED30004485-orf-1|Name=SMED30004485-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1293bp
MIKNWIITLFIQILLVSLISAEPLRRLKRQSGVKGPDPQGRSMSLPGPRG
PIGEQGPPGPPGPPGKPGPTGPLGPDGVPGKDGPQGVLGLIGPTGINGKP
GVDGSIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGP
QGNPGDIGVLGLPGPPGHKGAPGPSGRQGPQGPRGLQGVDGLPGQPGPLG
PQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIM
GSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGK
IGPVGPAGSPGSPGLIGEIGERGENGPFGNPGPQGPRGLRGSAGPKGVSG
PVGPPGMPGNPGIDGMPGIRGLKGKDGDPGSLGAMGPPGRQGVSGRDGPR
GERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDPGQPGPAGP
MGPPGPRGQRGPTGNPGNLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQG
SEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGTNGLSGKDGEDGDSGPV
GAPGADGPQGPKGKDGPPGFPGLIGQKGETGINGLPGRRGISGMPGMPGS
PGPVGVRGKVGKPGPPSKDGPPGQAGPQGPPGLDGPPGPDGSVKISGRSG
GGRGSPGPKGHKGQPGKNGMNGLQGPTGLSGNPGKQGPPGEAGPDGLLGP
MGPPGKDGKPGEDGNLGPIGKTGKVGKDGPPGPPGPTGDVGPIGPNGLPG
QNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGPTGKSGADGKKGPAGDD
GPPGPQGEAGDMGSPGQDGPPGNQGNRGPVGKPGPLGGSGPLGSPGIQGP
PGAEGKEGPPGPQGPLGPPGPQGSDGPVGNSGLDGMVGQPGPPGPLGDPG
PEGFPGTPGPLGVKGPMGPMGVGGSRGKAGAVGTPGPPGPEGKQGPEGPL
GHPGDDGLNAKDGEEGAPGKQGPRGDKGFTGEIGPDGKQGVKGKPGPNGI
PGYSGPRGPSGSKGPIGNPGSTGEQGFQGDRGPNGNLGAQGIDGAQGPLG
PQGPNGPPGPPGPPGVATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLG
TSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCI
KPLVFKIQLQKPKFNWFSQSNDNKFISYSLDQQQMTFLKMISNKASQFIT
INCRNMPVIKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLS
STRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell
PLANA:0000428	musculature system
PLANA:0000478	pharynx musculature
PLANA:0003104	enteric muscle cell

Vocabulary: **INTERPRO**
Term	Definition
IPR000885	Fib_collagen_C
IPR008160	Collagen

Vocabulary: **molecular function**
Term	Definition
GO:0005201	extracellular matrix structural constituent

Vocabulary: **cellular component**
Term	Definition
GO:0005581	collagen trimer
GO:0005578	proteinaceous extracellular matrix

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000885	Fibrillar collagen, C-terminal	SMART	SM00038	COLFI_2	coord: 1082..1292 e-value: 1.1E-17 score: 74.8
IPR000885	Fibrillar collagen, C-terminal	PFAM	PF01410	COLFI	coord: 1093..1291 e-value: 4.1E-39 score: 134.3
IPR000885	Fibrillar collagen, C-terminal	PROSITE	PS51461	NC1_FIB	coord: 1079..1290 score: 40.252
None	No IPR available	GENE3D	G3DSA:2.60.120.1000		coord: 1091..1292 e-value: 1.2E-51 score: 177.2
None	No IPR available	GENE3D	G3DSA:1.20.5.320		coord: 1038..1087 e-value: 3.8E-6 score: 28.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 924..946
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 484..506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 647..667
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 965..997
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 776..808
None	No IPR available	PANTHER	PTHR24023	FAMILY NOT NAMED	coord: 618..838 coord: 785..1246
None	No IPR available	PANTHER	PTHR24023:SF590	COLLAGEN ALPHA-1(XXIV) CHAIN	coord: 618..838 coord: 785..1246
None	No IPR available	PANTHER	PTHR24023	FAMILY NOT NAMED	coord: 272..429
None	No IPR available	PANTHER	PTHR24023	FAMILY NOT NAMED	coord: 207..375
None	No IPR available	PANTHER	PTHR24023:SF590	COLLAGEN ALPHA-1(XXIV) CHAIN	coord: 30..212 coord: 494..643 coord: 361..513
None	No IPR available	PANTHER	PTHR24023	FAMILY NOT NAMED	coord: 30..212 coord: 494..643 coord: 361..513
None	No IPR available	PANTHER	PTHR24023:SF590	COLLAGEN ALPHA-1(XXIV) CHAIN	coord: 272..429
None	No IPR available	PANTHER	PTHR24023:SF590	COLLAGEN ALPHA-1(XXIV) CHAIN	coord: 207..375
None	No IPR available	PRODOM	PD002078		coord: 1187..1291 e-value: 1.0E-9 score: 159.0
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.912
IPR008160	Collagen triple helix repeat	PFAM	PF01391	Collagen	coord: 1008..1065 e-value: 4.8E-8 score: 32.6 coord: 47..104 e-value: 9.5E-8 score: 31.7 coord: 651..705 e-value: 2.2E-6 score: 27.3 coord: 849..907 e-value: 1.5E-6 score: 27.8 coord: 584..642 e-value: 7.3E-7 score: 28.9

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Fibrillar collagen

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Owlery

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