Zinc finger PHD finger

Overview
NameZinc finger PHD finger
Smed IDSMED30004420
Length (bp)1500
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Zinc finger PHD finger (SMED30004420) t-SNE clustered cells

Violin plots show distribution of expression levels for Zinc finger PHD finger (SMED30004420) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Zinc finger PHD finger (SMED30004420) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Zinc finger PHD finger (SMED30004420) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30004420

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X2 cellSMED30004420h1SMcG0001560 SmedASXL_012292SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30004420h1SMcG0001560 Contig5115GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30004420h1SMcG0020690 Contig5115GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
prepharyngeal regionSMED30004420h1SMcG0001560 SMU15006135dd_Smed_v4PMID:30237141
Trost et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
epidermisSMED30004420h1SMcG0001560 dd_Smed_v4_5825_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Human
Match: DPF3 (double PHD fingers 3 [Source:HGNC Symbol;Acc:HGNC:17427])

HSP 1 Score: 173.711 bits (439), Expect = 8.282e-49
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  879 NHRQRLHDP-----SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NHR   H P      +V PN   CDFCLG    NKK+G  E+++ C+DC RS HP+CL F+ NM  +V  Y+WQC+ECK C +CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC    +EKA++
Sbjct:  240 NHRNENHRPQKGPDGTVIPNNY-CDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEKASA 373

HSP 2 Score: 51.9878 bits (123), Expect = 1.332e-6
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
             + +  Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++  +P
Sbjct:   11 ALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHP 87
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Human
Match: DPF1 (double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225])

HSP 1 Score: 170.244 bits (430), Expect = 5.450e-48
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 3 
Query:  906 SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
             +V PN   CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC+   +EKA++
Sbjct:  211 GTVIPNGY-CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASA 327
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Human
Match: DPF1 (double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225])

HSP 1 Score: 170.244 bits (430), Expect = 5.450e-48
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 3 
Query:  906 SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
             +V PN   CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC+   +EKA++
Sbjct:  211 GTVIPNGY-CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASA 327
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Human
Match: DPF2 (double PHD fingers 2 [Source:HGNC Symbol;Acc:HGNC:9964])

HSP 1 Score: 171.4 bits (433), Expect = 9.994e-48
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL P +S+PP G+WSC LC++  +EKA+
Sbjct:  287 CDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKAS 397
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Human
Match: DPF2 (double PHD fingers 2 [Source:HGNC Symbol;Acc:HGNC:9964])

HSP 1 Score: 171.014 bits (432), Expect = 1.126e-47
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL P +S+PP G+WSC LC++  +EKA+
Sbjct:  273 CDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKAS 383
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Match: dpff-1 (Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477])

HSP 1 Score: 150.599 bits (379), Expect = 1.187e-40
Identity = 70/139 (50.36%), Postives = 88/139 (63.31%), Query Frame = 3 
Query:  882 HRQRLHDPSSVTPN----------KISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            H+  LHD  S  P             SCDFC G    NK T L E ++ C DC RS HPSCLNF++N+   + R  WQCLECK C++CGT+ENDD++LFCDDCDRGYH+YCL P L + P   +SC LC   F +KA++
Sbjct:  230 HQSYLHDQKSSQPLVKLLSPSIEISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGHPSCLNFNQNVTKIIKRSGWQCLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEYSCRLCQVEFGDKASA 368
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Match: phf-10 (PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2A949])

HSP 1 Score: 94.3597 bits (233), Expect = 1.395e-20
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 3 
Query:  765 PPPPALTPISNCDSVSINPTQTIVTQQ--LNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCD 1232
            P PP L  I+  D V     + +  ++  LN    S +    ++  + P  + P++  CD C       +KTG   +MI C+ C  + HP C+   E M   V  Y W C++C++CS+C   E +DE++FCD CDRG+H YC+   L + P G W CD
Sbjct:  279 PSPPPLN-IAEQDLVRFEREEAMRAREATLNTTPQSSMAQIKQEPSYIPPPIDPSR-PCDSC-------EKTG--GEMICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCDRCDRGFHTYCVG--LKKLPQGTWICD 423
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Match: phf-10 (PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2A949])

HSP 1 Score: 94.3597 bits (233), Expect = 1.395e-20
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 3 
Query:  765 PPPPALTPISNCDSVSINPTQTIVTQQ--LNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCD 1232
            P PP L  I+  D V     + +  ++  LN    S +    ++  + P  + P++  CD C       +KTG   +MI C+ C  + HP C+   E M   V  Y W C++C++CS+C   E +DE++FCD CDRG+H YC+   L + P G W CD
Sbjct:  279 PSPPPLN-IAEQDLVRFEREEAMRAREATLNTTPQSSMAQIKQEPSYIPPPIDPSR-PCDSC-------EKTG--GEMICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCDRCDRGFHTYCVG--LKKLPQGTWICD 423
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Match: phf-10 (PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2A949])

HSP 1 Score: 85.1149 bits (209), Expect = 5.587e-20
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 3 
Query:  990 MIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCD 1232
            MI C+ C  + HP C+   E M   V  Y W C++C++CS+C   E +DE++FCD CDRG+H YC+   L + P G W CD
Sbjct:    1 MICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCDRCDRGFHTYCVG--LKKLPQGTWICD 79
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Match: set-16 (Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:G5EGI1])

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-17
Identity = 36/96 (37.50%), Postives = 55/96 (57.29%), Query Frame = 3 
Query:  990 MIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFR--EKAASA 1271
            M+ CS+C ++ H  C+   + +  +V    W+CL+C +C  CGT  ++  +L CD+CD  YH+YC++P L + P G W C  C    R   KAAS 
Sbjct:  442 MVACSNCAQTYHTYCVTLHDKLNSAVVGRGWRCLDCTVCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDKIPQGPWRCQWCSRCRRCNHKAASG 537
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Fly
Match: d4 (gene:FBgn0033015 transcript:FBtr0111115)

HSP 1 Score: 178.333 bits (451), Expect = 2.781e-51
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFRE 1256
            CDFCLG++ ENKKT + E+++ CSDC RS HPSCL F+ NM  SV RYRWQC+ECK CS+CGT++NDD++LFCDDCDRGYHMYCL PPL  PP G+WSC LC+  F +
Sbjct:  230 CDFCLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEEFHK 337
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Fly
Match: d4 (gene:FBgn0033015 transcript:FBtr0086083)

HSP 1 Score: 180.644 bits (457), Expect = 1.342e-50
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFRE 1256
            CDFCLG++ ENKKT + E+++ CSDC RS HPSCL F+ NM  SV RYRWQC+ECK CS+CGT++NDD++LFCDDCDRGYHMYCL PPL  PP G+WSC LC+  F +
Sbjct:  386 CDFCLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEEFHK 493

HSP 2 Score: 55.0694 bits (131), Expect = 1.014e-7
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
            Y +++ ++  +N  +  +R+ R+PFLD  TG+AQ H  L+ +   RM     G +Y+Y   RW+K K  Y
Sbjct:   31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRKPKRQY 100
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Fly
Match: d4 (gene:FBgn0033015 transcript:FBtr0335258)

HSP 1 Score: 180.644 bits (457), Expect = 1.382e-50
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFRE 1256
            CDFCLG++ ENKKT + E+++ CSDC RS HPSCL F+ NM  SV RYRWQC+ECK CS+CGT++NDD++LFCDDCDRGYHMYCL PPL  PP G+WSC LC+  F +
Sbjct:  387 CDFCLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEEFHK 494

HSP 2 Score: 55.0694 bits (131), Expect = 1.042e-7
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
            Y +++ ++  +N  +  +R+ R+PFLD  TG+AQ H  L+ +   RM     G +Y+Y   RW+K K  Y
Sbjct:   31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRKPKRQY 100
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Fly
Match: d4 (gene:FBgn0033015 transcript:FBtr0086082)

HSP 1 Score: 180.644 bits (457), Expect = 1.409e-50
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFRE 1256
            CDFCLG++ ENKKT + E+++ CSDC RS HPSCL F+ NM  SV RYRWQC+ECK CS+CGT++NDD++LFCDDCDRGYHMYCL PPL  PP G+WSC LC+  F +
Sbjct:  388 CDFCLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEEFHK 495

HSP 2 Score: 55.0694 bits (131), Expect = 9.646e-8
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
            Y +++ ++  +N  +  +R+ R+PFLD  TG+AQ H  L+ +   RM     G +Y+Y   RW+K K  Y
Sbjct:   31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRKPKRQY 100
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Fly
Match: e(y)3 (gene:FBgn0087008 transcript:FBtr0334279)

HSP 1 Score: 93.2041 bits (230), Expect = 1.489e-19
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 3 
Query:  930 SCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            +C  CL ++  N +  + E  I+C  C +  HPSC++    M   V  Y WQC  CK C  C +++   +ML+C+ CDRGYH+YCL   L   P G WSC+ C
Sbjct: 1700 TCGVCLRSQHRNARD-MPEAFIRCYTCRKRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCIKCRSSQRPGKMLYCEQCDRGYHIYCLG--LRTVPDGRWSCERC 1799
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Match: dpf3 (D4, zinc and double PHD fingers, family 3 [Source:NCBI gene;Acc:562738])

HSP 1 Score: 181.8 bits (460), Expect = 6.819e-52
Identity = 79/138 (57.25%), Postives = 104/138 (75.36%), Query Frame = 3 
Query:  858 QTSPVEM-NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            Q+ PV   NH+ +     S+ PN   CDFCLG+   N+KTG  E+++ CSDC RS HPSCL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP++QPP G+WSC LC N  ++KA+ 
Sbjct:  251 QSPPVHHENHKPQKAPDGSIIPNDY-CDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLCQNLLKDKASG 387

HSP 2 Score: 49.6766 bits (117), Expect = 5.759e-6
Identity = 23/79 (29.11%), Postives = 41/79 (51.90%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVL 278
             + +  Y + I     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++  +  L
Sbjct:   11 ALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPL 89
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Match: dpf1 (D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31])

HSP 1 Score: 176.792 bits (447), Expect = 4.863e-50
Identity = 78/130 (60.00%), Postives = 97/130 (74.62%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NH+ +     SV PN   CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC+   +EKA++
Sbjct:  264 NHKPKKAADGSVIPNGY-CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLRQLKEKASA 389

HSP 2 Score: 51.9878 bits (123), Expect = 9.146e-7
Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 3 
Query:   33 NSIVINNLS---YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQK 260
             +++ N+L    Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ + T R    + G +Y+Y    W+K++
Sbjct:   28 GTVIKNSLGEEFYREAIEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMEKTHRGPGVAPGQLYTYPARCWRKKR 106
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Match: dpf2l (D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132])

HSP 1 Score: 172.94 bits (437), Expect = 2.151e-48
Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+ + N+KTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+S PP G+WSC LC+   ++KA+
Sbjct:  285 CDFCLGDSSMNQKTGQSEELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLCLALLKDKAS 395
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Match: dpf2l (D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132])

HSP 1 Score: 172.94 bits (437), Expect = 2.151e-48
Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+ + N+KTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+S PP G+WSC LC+   ++KA+
Sbjct:  285 CDFCLGDSSMNQKTGQSEELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLCLALLKDKAS 395
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Match: dpf2 (D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2])

HSP 1 Score: 172.17 bits (435), Expect = 3.465e-48
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+ + N+KTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+S PP G+WSC LC+   +EKA+
Sbjct:  280 CDFCLGDSSLNQKTGQSEELVSCSDCGRSGHPSCLQFTPIMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMSVPPEGSWSCHLCLALLKEKAS 390
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Match: dpf2 (double PHD fingers 2 [Source:NCBI gene;Acc:100126056])

HSP 1 Score: 168.703 bits (426), Expect = 2.449e-47
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKT   E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC++  ++KA+
Sbjct:  226 CDFCLGDSKINKKTNQAEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKAS 336

HSP 2 Score: 52.7582 bits (125), Expect = 6.314e-7
Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 3 
Query:   90 YNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++  +P
Sbjct:    7 YNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGSAPGQLYTYPSRRWRKKRRAHP 67
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Match: dpf2 (double PHD fingers 2 [Source:NCBI gene;Acc:100126056])

HSP 1 Score: 169.474 bits (428), Expect = 5.479e-47
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKT   E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC++  ++KA+
Sbjct:  286 CDFCLGDSKINKKTNQAEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKAS 396

HSP 2 Score: 56.9954 bits (136), Expect = 3.308e-8
Identity = 24/77 (31.17%), Postives = 42/77 (54.55%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            ++    Y D +     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++  +P
Sbjct:    8 ILGEQYYKDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGSAPGQLYTYPSRRWRKKRRAHP 84
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Match: dpf2 (double PHD fingers 2 [Source:NCBI gene;Acc:100126056])

HSP 1 Score: 169.088 bits (427), Expect = 7.246e-47
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKT   E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC++  ++KA+
Sbjct:  287 CDFCLGDSKINKKTNQAEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKAS 397

HSP 2 Score: 56.6102 bits (135), Expect = 4.599e-8
Identity = 24/78 (30.77%), Postives = 42/78 (53.85%), Query Frame = 3 
Query:   39 IVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            + +    Y D +     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++  +P
Sbjct:    8 LFLGEQYYKDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGSAPGQLYTYPSRRWRKKRRAHP 85
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Match: dpf2 (double PHD fingers 2 [Source:NCBI gene;Acc:100126056])

HSP 1 Score: 166.007 bits (419), Expect = 8.589e-47
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKT   E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC++  ++KA+
Sbjct:  188 CDFCLGDSKINKKTNQAEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKAS 298
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Match: dpf2 (double PHD fingers 2 [Source:NCBI gene;Acc:100126056])

HSP 1 Score: 168.703 bits (426), Expect = 9.805e-47
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKT   E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC++  ++KA+
Sbjct:  290 CDFCLGDSKINKKTNQAEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKAS 400

HSP 2 Score: 55.4546 bits (132), Expect = 1.035e-7
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            Y D +     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++  +P
Sbjct:   18 YKDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGSAPGQLYTYPSRRWRKKRRAHP 88
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Match: Dpf3 (D4, zinc and double PHD fingers, family 3 [Source:MGI Symbol;Acc:MGI:1917377])

HSP 1 Score: 172.94 bits (437), Expect = 2.424e-49
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  879 NHRQRLHDP-----SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NHR   H P      +V PN   CDFCLG    NKK+G  E+++ C+DC RS HP+CL F+ NM  +V  Y+WQC+ECK C +CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC    +EKA++
Sbjct:  176 NHRNENHRPQKGPDGTVIPNNY-CDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEKASA 309
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Match: Dpf3 (D4, zinc and double PHD fingers, family 3 [Source:MGI Symbol;Acc:MGI:1917377])

HSP 1 Score: 173.711 bits (439), Expect = 5.126e-49
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  879 NHRQRLHDP-----SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NHR   H P      +V PN   CDFCLG    NKK+G  E+++ C+DC RS HP+CL F+ NM  +V  Y+WQC+ECK C +CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC    +EKA++
Sbjct:  240 NHRNENHRPQKGPDGTVIPNNY-CDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEKASA 373

HSP 2 Score: 52.373 bits (124), Expect = 8.749e-7
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
             + +  Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++  +P
Sbjct:   11 ALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHP 87
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Match: Dpf2 (D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529])

HSP 1 Score: 171.785 bits (434), Expect = 3.488e-48
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL P +S+PP G+WSC LC++  +EKA+
Sbjct:  273 CDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKAS 383
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Match: Dpf2 (D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529])

HSP 1 Score: 172.17 bits (435), Expect = 3.509e-48
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL P +S+PP G+WSC LC++  +EKA+
Sbjct:  287 CDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKAS 397
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Match: Dpf1 (D4, zinc and double PHD fingers family 1 [Source:MGI Symbol;Acc:MGI:1352748])

HSP 1 Score: 171.014 bits (432), Expect = 7.292e-48
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 3 
Query:  906 SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
             +V PN   CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC+   +EKA++
Sbjct:  267 GTVIPNGY-CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASA 383

HSP 2 Score: 50.447 bits (119), Expect = 3.109e-6
Identity = 24/67 (35.82%), Postives = 38/67 (56.72%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQK 260
            Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ + T R    + G +Y+Y    W+K++
Sbjct:   17 YREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKR 83
[Close]
BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Match: sp|A9LMC0|DPF3_DANRE (Zinc finger protein DPF3 OS=Danio rerio OX=7955 GN=dpf3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.147e-51
Identity = 79/138 (57.25%), Postives = 104/138 (75.36%), Query Frame = 3 
Query:  858 QTSPVEM-NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            Q+ PV   NH+ +     S+ PN   CDFCLG+   N+KTG  E+++ CSDC RS HPSCL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP++QPP G+WSC LC N  ++KA+ 
Sbjct:  251 QSPPVHHENHKPQKAPDGSIIPNDY-CDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLCQNLLKDKASG 387
[Close]
BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Match: sp|P58269|DPF3_MOUSE (Zinc finger protein DPF3 OS=Mus musculus OX=10090 GN=Dpf3 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 3.586e-48
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  879 NHRQRLHDP-----SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NHR   H P      +V PN   CDFCLG    NKK+G  E+++ C+DC RS HP+CL F+ NM  +V  Y+WQC+ECK C +CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC    +EKA++
Sbjct:  240 NHRNENHRPQKGPDGTVIPNNY-CDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEKASA 373

HSP 2 Score: 52.373 bits (124), Expect = 6.120e-6
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
             + +  Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++  +P
Sbjct:   11 ALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHP 87
[Close]
BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Match: sp|Q92784|DPF3_HUMAN (Zinc finger protein DPF3 OS=Homo sapiens OX=9606 GN=DPF3 PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 3.977e-48
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  879 NHRQRLHDP-----SSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NHR   H P      +V PN   CDFCLG    NKK+G  E+++ C+DC RS HP+CL F+ NM  +V  Y+WQC+ECK C +CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC    +EKA++
Sbjct:  240 NHRNENHRPQKGPDGTVIPNNY-CDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEKASA 373

HSP 2 Score: 51.9878 bits (123), Expect = 6.396e-6
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
             + +  Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++  +P
Sbjct:   11 ALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRRLHP 87
[Close]
BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Match: sp|P58268|REQU_CHICK (Zinc finger protein ubi-d4 OS=Gallus gallus OX=9031 GN=REQ PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.328e-48
Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   NKKTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC++  +EKA+
Sbjct:  287 CDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKAS 397
[Close]
BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Match: sp|P58270|DPF3_CHICK (Zinc finger protein DPF3 OS=Gallus gallus OX=9031 GN=DPF3 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.782e-48
Identity = 78/142 (54.93%), Postives = 100/142 (70.42%), Query Frame = 3 
Query:  858 QTSPVEMNHRQRLHDPSS-----VTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            ++SPV   HR   H P       + PN   CDFCLG    NKK+G  E+++ CSDC RS HP+CL F+ NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+ +PP G+WSC LC    RE+A++
Sbjct:  285 RSSPV---HRNENHKPQKGPDGVIIPNNY-CDFCLGGSNMNKKSGRPEELVSCSDCGRSGHPTCLQFTTNMTEAVKTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERASA 422
[Close]
BLAST of Zinc finger PHD finger vs. TrEMBL
Match: T1J0T8 (Uncharacterized protein OS=Strigamia maritima OX=126957 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.831e-62
Identity = 138/416 (33.17%), Postives = 201/416 (48.32%), Query Frame = 3 
Query:   45 INNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY------PVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAGQTINDIPDEESRYRSSQRNNTSSVNGNNL----APPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVE-MNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREK 1259
            + + SY + I  +S YN  +  +RK RLPFLD+ TG+AQ +  L+     RM   + G +Y+Y   RW+K++  Y      P   + +++ DS  +QI N +    S +  ++       S     QD  D S+  D                          +D  D E  Y   ++  TS+          A   +    +    G R    P L  H   + +   E+            +  E + P PP    +S  D ++           L   Q S +  + H       +  TP+   CDFCLG+ +ENKKT + E+++ CSDC RS HP+CL F+ NM  SV +YRWQC+ECK C++CGT++NDD++LFCDDCDRGYHMYCL PPLS+PP G+WSC LCI  F +K
Sbjct:   29 LQDPSYKESIEQSSSYNTRLCLERKLRLPFLDAQTGVAQSNCSLWMSKRHRMPGQAAGQLYTYPSKRWRKKRRQYLINFLRPARSRDMDMNDSDIHQI-NAVENPASKVDGDDRDDKGADSKDSWYQDYEDASEPPDAGEINDPE------------------SDYEDYEETYTKRKKRKTSTRGKRKTEKYDAASEVEKPFVCEACGARYKTRPGLTYHYTHSHNGVTEV------------TDDESTAPSPPVKPSMSTNDPLA----------GLKKFQDSFLTFLKHPGPKTGKTPATPSPY-CDFCLGDASENKKTRMAEELVSCSDCGRSGHPTCLQFTPNMMISVKKYRWQCIECKCCTICGTSDNDDQLLFCDDCDRGYHMYCLSPPLSEPPEGSWSCHLCIEEFHKK 402
[Close]
BLAST of Zinc finger PHD finger vs. TrEMBL
Match: A0A1L8DIK2 (Putative transcription factor requiem/neuro-d4 (Fragment) OS=Nyssomyia neivai OX=330878 PE=4 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.480e-61
Identity = 140/420 (33.33%), Postives = 204/420 (48.57%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPV-----LVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGI------------IEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAGQTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTF 1250
              N+ +Y +++ ++  YN  +  +R+ R+PFLD  TG+AQ H  L+ +   RM   + G +YSY   RW+K +  Y +     +++   +    ++ +Q+    + +   D +  S NV   +            ++  DD D SDF        RR + R     R K+   T  D+  ++   R   R   S           L   ++ +P         KL  H   +CS P         T+N          P PPA+      DS  + P +  +  +                L D   V P+   CDFCLG+  ENKKTG+ E+++ CSDC RS HP+CL F+ NM  SV RYRWQC+ECK CS+CGT++NDD++LFCDDCDRGYHMYCL P L+ PP G+WSC LCI  F
Sbjct:   16 FFNDSAYKEVLENSENYNTRLCIERRLRMPFLDPQTGVAQNHCALFMKSRQRMPGLASGQLYSYPAARWRKSRRQYLIQRPFRMLRETELESDFHHAVQDGASSLGAGDTDSK-DSQNVKDEVPKEWFYDMDLHDVDGFDDPD-SDFDYEEPYSIRRKQRRKGGDRRGKSTTSTTTDVIVKKPGARGRGRQKKS-----------LMETSMDSPSSSGMGSAKKLR-HDEPHCSSP--------STSNFPMPPECRPMPVPPAMP----FDSAPMEPEERSLPPR---------------GLVDKGKVAPSPY-CDFCLGDARENKKTGVPEELVSCSDCGRSGHPTCLQFTANMMISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPALTSPPEGSWSCKLCIEEF 393
[Close]
BLAST of Zinc finger PHD finger vs. TrEMBL
Match: A0A2C9JFQ5 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106077827 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.367e-61
Identity = 136/400 (34.00%), Postives = 185/400 (46.25%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAG-QTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSC--SSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTF 1250
            Y DL+   + +N  +  +RK RLPFLDS TG+AQRH+ L+     R      G +Y+Y   RWKK+K ++ +  + V                 E   GD     ++ IS I       D+ DF  +    G               A     +DI D E   +  +R                          P   +  K E HS        E+  P  +    +C    R+ SG       P       +   T+   +      ++SP   N          V+ N   CDFCLG+ TENKKT + E+++ CSDC RS HPSCL F++NM  SV +Y WQC+ECK C +CGT++NDD++LFCDDCDRGYHMYCL PPLS+PP G+WSC LCI  F
Sbjct:   21 YMDLLEQTASFNTRLSLERKMRLPFLDSQTGVAQRHTNLFHPYRHRQPGLIEGQLYTYPAKRWKKKKRSFFLSDRRVGAHG-------------EHEAGDAGKQYMHQISAIENPAHRLDEHDFEHIETNDGWYDDVDDFGEPPDDGAMVDDQSDISDFEDSLKGRKRKKA-----------------------PAKGRKKKTEDHS-------KELLSPEDKEKPYACEVGRRKGSGRCKKEYIP------KATKRTRGDTSSNGKASKSSPANGN---------KVSANNY-CDFCLGDATENKKTKVAEELVSCSDCGRSGHPSCLQFTDNMIISVKKYPWQCIECKSCGLCGTSDNDDQLLFCDDCDRGYHMYCLNPPLSEPPEGSWSCHLCIEEF 361
[Close]
BLAST of Zinc finger PHD finger vs. TrEMBL
Match: A0A2C9JFP9 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106077827 PE=4 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 8.651e-61
Identity = 136/402 (33.83%), Postives = 189/402 (47.01%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAG-QTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSI----NPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTF 1250
            Y DL+   + +N  +  +RK RLPFLDS TG+AQRH+ L+     R      G +Y+Y   RWKK+K ++ +  + V                 E   GD     ++ IS I       D+ DF  +    G               A     +DI D E   +  +R    +           T       + P   + P    ++   C    +  P L    +   +   D     P+  P S  +S  I      T+   +      ++SP   N          V+ N   CDFCLG+ TENKKT + E+++ CSDC RS HPSCL F++NM  SV +Y WQC+ECK C +CGT++NDD++LFCDDCDRGYHMYCL PPLS+PP G+WSC LCI  F
Sbjct:   21 YMDLLEQTASFNTRLSLERKMRLPFLDSQTGVAQRHTNLFHPYRHRQPGLIEGQLYTYPAKRWKKKKRSFFLSDRRVGAHG-------------EHEAGDAGKQYMHQISAIENPAHRLDEHDFEHIETNDGWYDDVDDFGEPPDDGAMVDDQSDISDFEDSLKGRKRKKAPAKGRKK-----KTEDHSKELLSPEDKEKP----YACEACGARYKTRPGLAYHYSHFHNGMMDEESRTPSPKPQSRANSEYIPKATKRTRGDTSSNGKASKSSPANGN---------KVSANNY-CDFCLGDATENKKTKVAEELVSCSDCGRSGHPSCLQFTDNMIISVKKYPWQCIECKSCGLCGTSDNDDQLLFCDDCDRGYHMYCLNPPLSEPPEGSWSCHLCIEEF 390
[Close]
BLAST of Zinc finger PHD finger vs. TrEMBL
Match: A0A2C9JFP2 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106077827 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.448e-60
Identity = 138/402 (34.33%), Postives = 191/402 (47.51%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAG-QTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKIS----CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTF 1250
            Y DL+   + +N  +  +RK RLPFLDS TG+AQRH+ L+     R      G +Y+Y   RWKK+K ++ +  + V                 E   GD +M   + IS I       D+ DF  +    G               A     +DI D E   +  +R    +           T       + P   + P    ++   C    +  P L    +   +   D     P+  P S  +S  I P  T  T+          + +   +    S    NK+S    CDFCLG+ TENKKT + E+++ CSDC RS HPSCL F++NM  SV +Y WQC+ECK C +CGT++NDD++LFCDDCDRGYHMYCL PPLS+PP G+WSC LCI  F
Sbjct:   21 YMDLLEQTASFNTRLSLERKMRLPFLDSQTGVAQRHTNLFHPYRHRQPGLIEGQLYTYPAKRWKKKKRSFFLSDRRVGAHG-------------EHEAGDADM---HQISAIENPAHRLDEHDFEHIETNDGWYDDVDDFGEPPDDGAMVDDQSDISDFEDSLKGRKRKKAPAKGRKKK-----TEDHSKELLSPEDKEKP----YACEACGARYKTRPGLAYHYSHFHNGMMDEESRTPSPKPQSRANSEYI-PKATKRTRG---------DTSSNGKASKSSPANGNKVSANNYCDFCLGDATENKKTKVAEELVSCSDCGRSGHPSCLQFTDNMIISVKKYPWQCIECKSCGLCGTSDNDDQLLFCDDCDRGYHMYCLNPPLSEPPEGSWSCHLCIEEF 387
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Match: dpf3 (zinc finger protein DPF3 [Source:NCBI gene;Acc:103031416])

HSP 1 Score: 179.104 bits (453), Expect = 2.304e-51
Identity = 72/131 (54.96%), Postives = 103/131 (78.63%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            NH+ +     ++ PN   CDFCLG+   N+KTG  E+++ CSDC RS HP+CL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP+++PP G+WSC LC++  ++KA+++
Sbjct:  219 NHKPQKGPDGAIIPNDY-CDFCLGDSISNRKTGQAEELVSCSDCGRSGHPTCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTEPPEGSWSCHLCLDLLKDKASAS 348

HSP 2 Score: 52.373 bits (124), Expect = 6.503e-7
Identity = 28/81 (34.57%), Postives = 43/81 (53.09%), Query Frame = 3 
Query:   36 SIVINNLS---YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
            +IV  NL    Y + I     YN  +  DR  R+PFLDS TG+AQ + Y++ +   R    + G +YSY    W+K++  +
Sbjct:    3 TIVHLNLGDQFYKEAIEHCRSYNARLCADRSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGLAAGQMYSYPARCWRKKRRLH 83
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Match: dpf3 (zinc finger protein DPF3 [Source:NCBI gene;Acc:103031416])

HSP 1 Score: 179.104 bits (453), Expect = 3.798e-51
Identity = 72/131 (54.96%), Postives = 103/131 (78.63%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            NH+ +     ++ PN   CDFCLG+   N+KTG  E+++ CSDC RS HP+CL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP+++PP G+WSC LC++  ++KA+++
Sbjct:  243 NHKPQKGPDGAIIPNDY-CDFCLGDSISNRKTGQAEELVSCSDCGRSGHPTCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTEPPEGSWSCHLCLDLLKDKASAS 372

HSP 2 Score: 52.7582 bits (125), Expect = 5.089e-7
Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
             + +  Y + I     YN  +  DR  R+PFLDS TG+AQ + Y++ +   R    + G +YSY    W+K++  +
Sbjct:    7 TLGDQFYKEAIEHCRSYNARLCADRSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGLAAGQMYSYPARCWRKKRRLH 82
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Match: dpf3 (zinc finger protein DPF3 [Source:NCBI gene;Acc:103031416])

HSP 1 Score: 179.489 bits (454), Expect = 4.311e-51
Identity = 72/131 (54.96%), Postives = 103/131 (78.63%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            NH+ +     ++ PN   CDFCLG+   N+KTG  E+++ CSDC RS HP+CL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP+++PP G+WSC LC++  ++KA+++
Sbjct:  257 NHKPQKGPDGAIIPNDY-CDFCLGDSISNRKTGQAEELVSCSDCGRSGHPTCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTEPPEGSWSCHLCLDLLKDKASAS 386

HSP 2 Score: 52.373 bits (124), Expect = 6.641e-7
Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
             + +  Y + I     YN  +  DR  R+PFLDS TG+AQ + Y++ +   R    + G +YSY    W+K++  +
Sbjct:    7 TLGDQFYKEAIEHCRSYNARLCADRSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGLAAGQMYSYPARCWRKKRRLH 82
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Match: dpf3 (zinc finger protein DPF3 [Source:NCBI gene;Acc:103031416])

HSP 1 Score: 179.489 bits (454), Expect = 4.311e-51
Identity = 72/131 (54.96%), Postives = 103/131 (78.63%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            NH+ +     ++ PN   CDFCLG+   N+KTG  E+++ CSDC RS HP+CL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP+++PP G+WSC LC++  ++KA+++
Sbjct:  257 NHKPQKGPDGAIIPNDY-CDFCLGDSISNRKTGQAEELVSCSDCGRSGHPTCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTEPPEGSWSCHLCLDLLKDKASAS 386

HSP 2 Score: 52.373 bits (124), Expect = 6.641e-7
Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
             + +  Y + I     YN  +  DR  R+PFLDS TG+AQ + Y++ +   R    + G +YSY    W+K++  +
Sbjct:    7 TLGDQFYKEAIEHCRSYNARLCADRSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGLAAGQMYSYPARCWRKKRRLH 82
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Match: dpf3 (zinc finger protein DPF3 [Source:NCBI gene;Acc:103031416])

HSP 1 Score: 179.874 bits (455), Expect = 5.195e-51
Identity = 72/131 (54.96%), Postives = 103/131 (78.63%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            NH+ +     ++ PN   CDFCLG+   N+KTG  E+++ CSDC RS HP+CL F++NM  +V  Y+WQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL+PP+++PP G+WSC LC++  ++KA+++
Sbjct:  284 NHKPQKGPDGAIIPNDY-CDFCLGDSISNRKTGQAEELVSCSDCGRSGHPTCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTEPPEGSWSCHLCLDLLKDKASAS 413

HSP 2 Score: 52.7582 bits (125), Expect = 5.519e-7
Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
             + +  Y + I     YN  +  DR  R+PFLDS TG+AQ + Y++ +   R    + G +YSY    W+K++  +
Sbjct:   34 ALGDQFYKEAIEHCRSYNARLCADRSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGLAAGQMYSYPARCWRKKRRLH 109
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Match: dpf2 (D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2])

HSP 1 Score: 177.948 bits (450), Expect = 4.751e-51
Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG   ENKKTG  E+++ CSDC RS HPSCL F+ NM  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL P +S+PP G+WSC LC++  +EKA+
Sbjct:  289 CDFCLGGSVENKKTGQPEELVSCSDCGRSGHPSCLQFTSNMIAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPAMSEPPEGSWSCRLCLDLLKEKAS 399

HSP 2 Score: 48.9062 bits (115), Expect = 1.652e-6
Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 3 
Query:   27 NMNSIVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRM-THPSLGYVYSYVPLRWKKQKNTYP 272
            ++ +  + +  Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R     + G +Y+Y   RW+K++   P
Sbjct:    6 DIQTRSLGDQFYREAIEHCHNYNARLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPAGVAPGQLYTYPARRWRKKRRLPP 88
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002602.1 (pep scaffold:Pmarinus_7.0:GL477730:26567:61347:1 gene:ENSPMAG00000002341.1 transcript:ENSPMAT00000002602.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 87.8113 bits (216), Expect = 2.104e-18
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 3 
Query:  975 GLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCI 1241
            G   Q++ CS C +  HP C+     +   V    W+CLEC +C  CG   +   +L CDDCD  YH+YCL+PPL   P G W C  C+
Sbjct:  814 GAEGQLLACSQCGQCYHPYCVG--TKITRVVLSKGWRCLECTVCESCGLTSDPGRLLLCDDCDISYHIYCLEPPLHTVPKGGWKCKWCV 900

HSP 2 Score: 69.707 bits (169), Expect = 9.338e-13
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 3 
Query:  978 LREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            L  Q+  C+ C +  H  CL  + +   +  R  WQC ECK    C    +D +ML CD CD+G+H YCL+P +   P   W C  C
Sbjct:  223 LHNQLF-CTSCGQHYHGRCLEIAPS---TAIRAGWQCPECKTNKKCMQPGDDSKMLVCDACDKGFHTYCLRPAMQSIPKNTWKCKHC 305
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Match: kdm5c (lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94])

HSP 1 Score: 61.6178 bits (148), Expect = 2.318e-10
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 3 
Query: 1083 QCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCI 1241
            Q +E  +C +CG  + +D++L CD CD  YH +CL PPL   P G+W C  C+
Sbjct:  309 QFIEMYVCLVCGRGDEEDKLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCV 361
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004580.1 (pep scaffold:Pmarinus_7.0:GL479395:1031:10600:-1 gene:ENSPMAG00000004170.1 transcript:ENSPMAT00000004580.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 56.225 bits (134), Expect = 6.335e-9
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 3 
Query: 1104 CSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCI 1241
            C  CG ++ ++ ML CD CD G+HM CL PPL   P   W C  C+
Sbjct:  100 CRACGLSDREERMLLCDACDAGFHMECLVPPLDSIPVEEWFCPTCL 145
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Match: kdm5c (lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94])

HSP 1 Score: 56.225 bits (134), Expect = 1.596e-8
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 3 
Query: 1104 CSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCI 1241
            C +CG  +++ ++L CD CD  YH +CL PPL   P G+W C  C+
Sbjct:  323 CLVCGRGDDEAKLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCV 368
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Yeast
Match: JHD2 (JmjC domain family histone demethylase; promotes global demethylation of H3K4 and repression of noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p methyltransferase; negatively regulated by H3K14 acetylation; protein levels regulated by Not4p polyubiquitin-mediated degradation; regulates sporulation timing by extending period of active transcription in opposition to programmed global transcriptional quiescence; regulates rDNA silencing [Source:SGD;Acc:S000003880])

HSP 1 Score: 52.373 bits (124), Expect = 1.047e-7
Identity = 19/46 (41.30%), Postives = 29/46 (63.04%), Query Frame = 3 
Query: 1104 CSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCI 1241
            C +C    +    + CD CD+ +H+YCL PPL + P+G+W C+ CI
Sbjct:  238 CIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCI 283
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Match: EDO41238 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4Z1])

HSP 1 Score: 168.703 bits (426), Expect = 2.914e-48
Identity = 69/110 (62.73%), Postives = 90/110 (81.82%), Query Frame = 3 
Query:  909 SVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            SVTPN   CDFCLG+ +ENKK+G  E+++ CSDC RS HPSCL F+  + ++V +YRWQC+ECK C++CGT++NDD++LFCDDCDRGYHMYCL PP+ +PP G+W C LC
Sbjct:  185 SVTPNSY-CDFCLGDVSENKKSGRPEELLSCSDCGRSGHPSCLQFTPKLTYNVKKYRWQCIECKSCTLCGTSDNDDQLLFCDDCDRGYHMYCLNPPMDKPPEGHWMCSLC 293

HSP 2 Score: 53.1434 bits (126), Expect = 1.095e-7
Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTY 269
            Y D + + S +N  +  +RK R PFLD+ TGIA  +  L+     R    S  Y+Y+Y   RW+K+K  Y
Sbjct:    2 YRDALDNVSAFNAKLCFERKMRAPFLDAQTGIAMNNCNLWLSKFMRREPESSQYIYTYPARRWRKKKRVY 71
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Match: EDO39741 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S985])

HSP 1 Score: 110.923 bits (276), Expect = 1.353e-27
Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 3 
Query:  900 DPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGN 1220
            +P   TPN + C FCLG   E+ K G  E++I C+DC  S HPSCL +S  +   V    WQC+ECK CS+C  A + D +LFCD CDRG+HM CL PP+S+ P G 
Sbjct:  169 NPPKATPNPL-CGFCLG-PAESNKEGDYEELISCADCGNSGHPSCLKYSPALTARVQSEPWQCIECKTCSVCRDAGDADNLLFCDMCDRGFHMECLDPPMSEMPTGK 273
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Match: EDO31764 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX13])

HSP 1 Score: 87.8113 bits (216), Expect = 1.578e-21
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 3 
Query: 1008 CDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            C    HPSCL+  +N+   +  Y WQC +CK C +C T E  +E+L CD+CDRGYHM CL P L++ P G W C LC
Sbjct:    2 CCLVGHPSCLDLGDNVADIIKHYPWQCNDCKTCHLCDTGEVQNELLLCDNCDRGYHMSCLDPKLTKAPKGAWHCVLC 78
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Match: EDO37588 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFA6])

HSP 1 Score: 81.2629 bits (199), Expect = 2.482e-17
Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 3 
Query:  987 QMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASA 1271
            Q+I CS C +  HP C+    N    +    W+CL+C +C  CG   ++  +L CD CD  YH YCL PPL + P G W C  C++     A SA
Sbjct:   15 QLIVCSQCGQCFHPYCVGVKVNKM--ILSKGWRCLDCTLCEGCGKGSDEARLLLCDSCDISYHTYCLDPPLEKVPPGGWKCKWCVSCDDCGATSA 107
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Match: EDO37587 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFA5])

HSP 1 Score: 77.411 bits (189), Expect = 5.576e-16
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 3 
Query:  987 QMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSC 1229
            +M+ C+ C R  H  CL+ +  +  S+ R  WQC +CK+C  C    +D++ML CD CDRGYH +CL PP++  P   W C
Sbjct:  186 EMLFCTSCGRHYHGRCLDPAVEIT-SLVRMGWQCPDCKVCQGCRQPGDDNKMLVCDVCDRGYHTFCLDPPMTTIPKTGWKC 265
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Match: dpf2 (zinc finger protein ubi-d4 [Source:NCBI gene;Acc:101161743])

HSP 1 Score: 174.096 bits (440), Expect = 1.517e-49
Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   N KTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C+MCGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC+   +EKA+
Sbjct:  233 CDFCLGDSKTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGTSENDDQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLALLKEKAS 343

HSP 2 Score: 56.9954 bits (136), Expect = 2.120e-8
Identity = 24/77 (31.17%), Postives = 43/77 (55.84%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            ++    Y D +     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++ ++P
Sbjct:   11 LLGEQYYRDALEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGVAPGQLYTYPARRWRKKRRSHP 87
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Match: dpf2 (zinc finger protein ubi-d4 [Source:NCBI gene;Acc:101161743])

HSP 1 Score: 174.481 bits (441), Expect = 4.829e-49
Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+   N KTG  E+++ CSDC RS HPSCL F+  M  +V  YRWQC+ECK C+MCGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC+   +EKA+
Sbjct:  285 CDFCLGDSKTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGTSENDDQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLALLKEKAS 395

HSP 2 Score: 57.3806 bits (137), Expect = 1.460e-8
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP 272
            V+    Y D +     YN  +  +R  R+PFLDS TG+AQ + Y++ +   R    + G +Y+Y   RW+K++ ++P
Sbjct:    3 VLGEQYYRDALEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKRHRGPGVAPGQLYTYPARRWRKKRRSHP 79
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Match: dpf1 (double PHD fingers 1 [Source:NCBI gene;Acc:101156029])

HSP 1 Score: 173.711 bits (439), Expect = 8.110e-49
Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 3 
Query:  879 NHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            NH+ +     SV  N   CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC+   +EKA++
Sbjct:  276 NHKPKKAPDGSVIANGY-CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLRQLKEKASA 401

HSP 2 Score: 50.8322 bits (120), Expect = 1.825e-6
Identity = 25/79 (31.65%), Postives = 43/79 (54.43%), Query Frame = 3 
Query:   33 NSIVINNLS---YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQK 260
             +++ N+L    Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++
Sbjct:   40 GAVIKNSLGEEFYKEAIEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMEKNHRGPGHAPGQLYTYPARCWRKKR 118
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Match: ENSORLT00000003541.2 (zinc finger protein ubi-d4 [Source:NCBI gene;Acc:101173716])

HSP 1 Score: 172.555 bits (436), Expect = 1.331e-48
Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAA 1265
            CDFCLG+ T N+KTG  E+++ CSDC RS HP+CL F+  M  +V  YRWQC+ECK C++CGT+ENDD++LFCDDCDRGYHMYCL PP+++PP G+WSC LC+   ++KA+
Sbjct:  257 CDFCLGDSTLNQKTGQSEELVSCSDCGRSGHPTCLQFTPVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCDRGYHMYCLTPPMTEPPEGSWSCHLCLALLKDKAS 367

HSP 2 Score: 58.5362 bits (140), Expect = 5.987e-9
Identity = 35/135 (25.93%), Postives = 65/135 (48.15%), Query Frame = 3 
Query:   42 VINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYP------VL--VKSVNIRDSLNNQIQNNI--CEVESIIGDEEMTSLNVISGIIEAQDDT 416
            V+    Y D +     YN  +  +R   +PFLDS TG+AQ + Y++ +   R    + G +YSY   RW+K++ ++P      V   +K+ ++   L       +    +E+++  E +   + +S I   +DDT
Sbjct:   11 VLGEQYYRDAMEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKRHRSAGLAPGQLYSYPARRWRKKRRSHPPEDPRLVFPPLKAADLELGLKRDALGAVDGSSLEALLKGEPLERRSGVSDIRGPEDDT 145
[Close]
BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Match: dpf1 (double PHD fingers 1 [Source:NCBI gene;Acc:101156029])

HSP 1 Score: 170.629 bits (431), Expect = 2.362e-48
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 3 
Query:  933 CDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAAS 1268
            CDFCLG    +KKTG  E +I C+DC RS HPSCL F+ NM  +V  YRWQC+ECK CS+CGT+ENDD++LFCDDCDRGYHMYCL PP+S+PP G+WSC LC+   +EKA++
Sbjct:  230 CDFCLGG---SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLRQLKEKASA 338

HSP 2 Score: 49.2914 bits (116), Expect = 5.465e-6
Identity = 23/68 (33.82%), Postives = 37/68 (54.41%), Query Frame = 3 
Query:   60 YDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKN 263
            Y + I     YN  +  +R  RLPFLDS TG+AQ + Y++ +   R    + G +Y+Y    W+K++ 
Sbjct:   19 YKEAIEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMEKNHRGPGHAPGQLYTYPARCWRKKRR 86
[Close]
BLAST of Zinc finger PHD finger vs. Planmine SMEST
Match: SMESG000031948.1 (SMESG000031948.1)

HSP 1 Score: 795.423 bits (2053), Expect = 0.000e+0
Identity = 417/419 (99.52%), Postives = 418/419 (99.76%), Query Frame = 3 
Query:   30 MNSIVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVAXXXXXXXXXXXXXXXXXKAAGQTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASARLDSS 1286
            MNSIVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVARKRGRRGRGRLSNRGRRKAAGQTINDIP+EESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPS VTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASARLDSS
Sbjct:    1 MNSIVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLYKQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNNICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVARKRGRRGRGRLSNRGRRKAAGQTINDIPEEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVAPVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPALTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSPVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLCINTFREKAASARLDSS 419
[Close]
BLAST of Zinc finger PHD finger vs. Planmine SMEST
Match: SMESG000062900.1 (SMESG000062900.1)

HSP 1 Score: 123.25 bits (308), Expect = 2.490e-29
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 3 
Query:  855 IQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCG-TAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            I+  PV++ ++ +  +   V P  I C FCLG+E  NK+T  +E MI C DC   AHP+CL + +++   V   RWQCL+CK CS CG  +  DD+ML CD CD+G+H+YC  PP+   P G W C +C
Sbjct:  165 IEQKPVKI-YKSKPINRKMVRPIPI-CAFCLGDEALNKRTKRQENMINCWDCGTCAHPTCLQWPDSLFQKVRTIRWQCLQCKRCSYCGMISRKDDDMLLCDACDQGFHIYCCDPPIKNLPKGEWVCRIC 291
[Close]
BLAST of Zinc finger PHD finger vs. Planmine SMEST
Match: SMESG000062900.1 (SMESG000062900.1)

HSP 1 Score: 123.25 bits (308), Expect = 2.511e-29
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 3 
Query:  855 IQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCG-TAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            I+  PV++ ++ +  +   V P  I C FCLG+E  NK+T  +E MI C DC   AHP+CL + +++   V   RWQCL+CK CS CG  +  DD+ML CD CD+G+H+YC  PP+   P G W C +C
Sbjct:  165 IEQKPVKI-YKSKPINRKMVRPIPI-CAFCLGDEALNKRTKRQENMINCWDCGTCAHPTCLQWPDSLFQKVRTIRWQCLQCKRCSYCGMISRKDDDMLLCDACDQGFHIYCCDPPIKNLPKGEWVCRIC 291
[Close]
BLAST of Zinc finger PHD finger vs. Planmine SMEST
Match: SMESG000062900.1 (SMESG000062900.1)

HSP 1 Score: 123.25 bits (308), Expect = 2.513e-29
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 3 
Query:  855 IQTSPVEMNHRQRLHDPSSVTPNKISCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCG-TAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            I+  PV++ ++ +  +   V P  I C FCLG+E  NK+T  +E MI C DC   AHP+CL + +++   V   RWQCL+CK CS CG  +  DD+ML CD CD+G+H+YC  PP+   P G W C +C
Sbjct:  167 IEQKPVKI-YKSKPINRKMVRPIPI-CAFCLGDEALNKRTKRQENMINCWDCGTCAHPTCLQWPDSLFQKVRTIRWQCLQCKRCSYCGMISRKDDDMLLCDACDQGFHIYCCDPPIKNLPKGEWVCRIC 293
[Close]
BLAST of Zinc finger PHD finger vs. Planmine SMEST
Match: SMESG000073716.1 (SMESG000073716.1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.229e-19
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 3 
Query:  993 IKCSDCDRSAHPSCLNFSENMRFSVTRYRWQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSCDLC 1238
            +KC+DC +  HP C++  ++M   V  Y W C++CK C  C  A ++++M+FCD CDRGYH YC+   L   P GNW C  C
Sbjct:  363 LKCADCGKGGHPECMDIKDDMIEVVRGYNWSCMDCKKCHKCSQATDEEQMMFCDKCDRGYHAYCV--GLKGIPDGNWECSNC 442
The following BLAST results are available for this feature:
BLAST of Zinc finger PHD finger vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DPF38.282e-4955.56double PHD fingers 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
DPF15.450e-4861.16double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
DPF15.450e-4861.16double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
DPF29.994e-4863.06double PHD fingers 2 [Source:HGNC Symbol;Acc:HGNC:... [more]
DPF21.126e-4763.06double PHD fingers 2 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpff-11.187e-4050.36Zinc finger protein dpff-1 [Source:UniProtKB/Swis... [more]
phf-101.395e-2034.18PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2... [more]
phf-101.395e-2034.18PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2... [more]
phf-105.587e-2044.44PHd Finger family [Source:UniProtKB/TrEMBL;Acc:Q2... [more]
set-162.280e-1737.50Histone-lysine N-methyltransferase [Source:UniPro... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
d42.781e-5166.67gene:FBgn0033015 transcript:FBtr0111115[more]
d41.342e-5066.67gene:FBgn0033015 transcript:FBtr0086083[more]
d41.382e-5066.67gene:FBgn0033015 transcript:FBtr0335258[more]
d41.409e-5066.67gene:FBgn0033015 transcript:FBtr0086082[more]
e(y)31.489e-1939.81gene:FBgn0087008 transcript:FBtr0334279[more]
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BLAST of Zinc finger PHD finger vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpf36.819e-5257.25D4, zinc and double PHD fingers, family 3 [Source:... [more]
dpf14.863e-5060.00D4, zinc and double PHD fingers family 1 [Source:Z... [more]
dpf2l2.151e-4862.16D4, zinc and double PHD fingers family 2, like [So... [more]
dpf2l2.151e-4862.16D4, zinc and double PHD fingers family 2, like [So... [more]
dpf23.465e-4863.06D4, zinc and double PHD fingers family 2 [Source:Z... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpf22.449e-4761.26double PHD fingers 2 [Source:NCBI gene;Acc:1001260... [more]
dpf25.479e-4761.26double PHD fingers 2 [Source:NCBI gene;Acc:1001260... [more]
dpf27.246e-4761.26double PHD fingers 2 [Source:NCBI gene;Acc:1001260... [more]
dpf28.589e-4761.26double PHD fingers 2 [Source:NCBI gene;Acc:1001260... [more]
dpf29.805e-4761.26double PHD fingers 2 [Source:NCBI gene;Acc:1001260... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Dpf32.424e-4955.56D4, zinc and double PHD fingers, family 3 [Source:... [more]
Dpf35.126e-4955.56D4, zinc and double PHD fingers, family 3 [Source:... [more]
Dpf23.488e-4863.06D4, zinc and double PHD fingers family 2 [Source:M... [more]
Dpf23.509e-4863.06D4, zinc and double PHD fingers family 2 [Source:M... [more]
Dpf17.292e-4861.16D4, zinc and double PHD fingers family 1 [Source:M... [more]
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BLAST of Zinc finger PHD finger vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|A9LMC0|DPF3_DANRE5.147e-5157.25Zinc finger protein DPF3 OS=Danio rerio OX=7955 GN... [more]
sp|P58269|DPF3_MOUSE3.586e-4855.56Zinc finger protein DPF3 OS=Mus musculus OX=10090 ... [more]
sp|Q92784|DPF3_HUMAN3.977e-4855.56Zinc finger protein DPF3 OS=Homo sapiens OX=9606 G... [more]
sp|P58268|REQU_CHICK4.328e-4863.96Zinc finger protein ubi-d4 OS=Gallus gallus OX=903... [more]
sp|P58270|DPF3_CHICK7.782e-4854.93Zinc finger protein DPF3 OS=Gallus gallus OX=9031 ... [more]
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BLAST of Zinc finger PHD finger vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
T1J0T83.831e-6233.17Uncharacterized protein OS=Strigamia maritima OX=1... [more]
A0A1L8DIK23.480e-6133.33Putative transcription factor requiem/neuro-d4 (Fr... [more]
A0A2C9JFQ54.367e-6134.00Uncharacterized protein OS=Biomphalaria glabrata O... [more]
A0A2C9JFP98.651e-6133.83Uncharacterized protein OS=Biomphalaria glabrata O... [more]
A0A2C9JFP22.448e-6034.33Uncharacterized protein OS=Biomphalaria glabrata O... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpf32.304e-5154.96zinc finger protein DPF3 [Source:NCBI gene;Acc:103... [more]
dpf33.798e-5154.96zinc finger protein DPF3 [Source:NCBI gene;Acc:103... [more]
dpf34.311e-5154.96zinc finger protein DPF3 [Source:NCBI gene;Acc:103... [more]
dpf34.311e-5154.96zinc finger protein DPF3 [Source:NCBI gene;Acc:103... [more]
dpf35.195e-5154.96zinc finger protein DPF3 [Source:NCBI gene;Acc:103... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpf24.751e-5164.86D4, zinc and double PHD fingers family 2 [Source:Z... [more]
ENSPMAT00000002602.12.104e-1840.45pep scaffold:Pmarinus_7.0:GL477730:26567:61347:1 g... [more]
kdm5c2.318e-1043.40lysine (K)-specific demethylase 5C [Source:ZFIN;Ac... [more]
ENSPMAT00000004580.16.335e-945.65pep scaffold:Pmarinus_7.0:GL479395:1031:10600:-1 g... [more]
kdm5c1.596e-843.48lysine (K)-specific demethylase 5C [Source:ZFIN;Ac... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
JHD21.047e-741.30JmjC domain family histone demethylase; promotes g... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO412382.914e-4862.73Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO397411.353e-2749.53Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO317641.578e-2149.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO375882.482e-1738.95Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO375875.576e-1641.98Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Zinc finger PHD finger vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dpf21.517e-4963.96zinc finger protein ubi-d4 [Source:NCBI gene;Acc:1... [more]
dpf24.829e-4963.96zinc finger protein ubi-d4 [Source:NCBI gene;Acc:1... [more]
dpf18.110e-4959.23double PHD fingers 1 [Source:NCBI gene;Acc:1011560... [more]
ENSORLT00000003541.21.331e-4861.26zinc finger protein ubi-d4 [Source:NCBI gene;Acc:1... [more]
dpf12.362e-4864.29double PHD fingers 1 [Source:NCBI gene;Acc:1011560... [more]
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BLAST of Zinc finger PHD finger vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000031948.10.000e+099.52SMESG000031948.1[more]
SMESG000062900.12.490e-2944.19SMESG000062900.1[more]
SMESG000062900.12.511e-2944.19SMESG000062900.1[more]
SMESG000062900.12.513e-2944.19SMESG000062900.1[more]
SMESG000073716.11.229e-1943.90SMESG000073716.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30004420 ID=SMED30004420|Name=Zinc finger PHD finger|organism=Schmidtea mediterranea sexual|type=transcript|length=1500bp
CTAAAATTTAAAGTCCTTCAAAATTGAATATGAATTCTATTGTAATCAAT
AATTTGTCATATGATGATTTAATTCGTTCAGCATCTAGATACAATTACAC
TATTCATCATGATAGGAAATCTAGATTACCTTTTCTTGATAGTTCTACTG
GTATTGCTCAAAGGCACTCATACCTATATAAACAAGTTACAGATCGCATG
ACACATCCATCTTTGGGATATGTATATAGTTATGTTCCATTAAGGTGGAA
GAAACAGAAAAATACATATCCTGTGTTAGTAAAAAGTGTTAATATTCGTG
ATTCCTTAAATAATCAAATACAAAATAATATTTGTGAAGTTGAATCGATT
ATTGGGGATGAAGAAATGACTTCTTTGAATGTAATTAGTGGAATAATTGA
GGCCCAAGATGATACAGATGACAGTGATTTCTGTGATGTAGCTAGGAAAA
GAGGACGACGTGGTCGTGGCCGATTAAGTAATCGAGGTCGAAGAAAAGCG
GCAGGACAAACAATTAATGATATTCCAGATGAAGAAAGTCGATATAGATC
ATCTCAGCGTAACAACACCAGTTCAGTTAATGGAAATAATTTGGCACCAC
CGCTTTTGACAAATGCCACTCTTGTAGCTCCAGTGGGACCTAGACCTTCT
CAACCTCCGAAATTAGAAAGTCACTCAATCATTAACTGTTCTGAACCAAT
CGAAATTTGTCCACCTCTTCAGCAAACAAATAATGATTCTTGCAGCAGTC
GAGAAGATTCAGGGCCACCACCACCCGCATTAACACCAATATCAAACTGT
GATTCAGTGTCGATTAATCCAACTCAAACAATTGTTACACAGCAACTTAA
TAACATTCAAACATCTCCTGTTGAAATGAATCACCGTCAACGGCTTCACG
ATCCATCTTCAGTGACACCAAACAAAATCAGTTGTGATTTCTGTCTTGGA
AATGAAACGGAAAACAAGAAAACTGGATTGCGTGAACAAATGATCAAATG
CAGTGATTGTGATAGAAGCGCACATCCGTCATGTCTAAATTTTAGCGAAA
ATATGCGATTCTCTGTCACTAGATATCGATGGCAATGTCTGGAATGTAAA
ATGTGCTCAATGTGCGGAACTGCCGAAAATGATGATGAAATGCTGTTCTG
TGATGATTGTGACCGCGGCTATCACATGTATTGTTTGCAGCCTCCTCTTA
GCCAGCCGCCAGCTGGAAACTGGAGTTGCGATTTATGCATTAATACGTTT
CGAGAGAAAGCAGCTTCAGCAAGACTTGATAGCTCATGAAAATAAATTTT
AATCGTATTTTTGCTCTCATTTGCTTTTCATACTAATTCATTGCGATAAA
TAATAATATTTTTGCTGTTGAATTTGTCAGAATTTTTATTTTCTCATCAA
TCGAGTTTGTTTCCTGAACGGTGCTAATAATTTCCATCGGTGTTGAGCAT
GATATTTTTATTTTTGTAAATTTGTGCTGTTGTTTTCGATTAAATATTTT
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protein sequence of SMED30004420-orf-1

>SMED30004420-orf-1 ID=SMED30004420-orf-1|Name=SMED30004420-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=420bp
MNSIVINNLSYDDLIRSASRYNYTIHHDRKSRLPFLDSSTGIAQRHSYLY
KQVTDRMTHPSLGYVYSYVPLRWKKQKNTYPVLVKSVNIRDSLNNQIQNN
ICEVESIIGDEEMTSLNVISGIIEAQDDTDDSDFCDVARKRGRRGRGRLS
NRGRRKAAGQTINDIPDEESRYRSSQRNNTSSVNGNNLAPPLLTNATLVA
PVGPRPSQPPKLESHSIINCSEPIEICPPLQQTNNDSCSSREDSGPPPPA
LTPISNCDSVSINPTQTIVTQQLNNIQTSPVEMNHRQRLHDPSSVTPNKI
SCDFCLGNETENKKTGLREQMIKCSDCDRSAHPSCLNFSENMRFSVTRYR
WQCLECKMCSMCGTAENDDEMLFCDDCDRGYHMYCLQPPLSQPPAGNWSC
DLCINTFREKAASARLDSS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0046872metal ion binding
Vocabulary: cellular component
TermDefinition
GO:0071565nBAF complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000419prepharyngeal region
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR038046DPF1
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR025750Requiem/DPF_N_dom
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 301..357
e-value: 1.4E-7
score: 41.2
coord: 358..404
e-value: 2.9E-13
score: 60.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 358..405
e-value: 1.8E-13
score: 50.1
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 299..359
score: 9.33
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 356..406
score: 10.825
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 299..418
e-value: 4.0E-36
score: 125.7
IPR025750Requiem/DPF N-terminal domainPFAMPF14051Requiem_Ncoord: 8..77
e-value: 3.7E-20
score: 71.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..192
NoneNo IPR availablePANTHERPTHR10615HISTONE ACETYLTRANSFERASEcoord: 24..77
NoneNo IPR availablePANTHERPTHR10615HISTONE ACETYLTRANSFERASEcoord: 294..413
NoneNo IPR availableCDDcd15530PHD2_d4coord: 359..403
e-value: 7.52415E-24
score: 91.2911
IPR038046Zinc finger protein neuro-d4PANTHERPTHR10615:SF12ZINC FINGER PROTEIN NEURO-D4coord: 294..413
IPR038046Zinc finger protein neuro-d4PANTHERPTHR10615:SF12ZINC FINGER PROTEIN NEURO-D4coord: 24..77
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILYSSF57903FYVE/PHD zinc fingercoord: 291..358
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILYSSF57903FYVE/PHD zinc fingercoord: 344..408