SMED30004199

Overview
NameSMED30004199
Smed IDSMED30004199
Length (bp)1549
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30004199 (SMED30004199) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30004199 (SMED30004199) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30004199 (SMED30004199) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30004199 (SMED30004199) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30004199

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
Smed sexual biotypeSMED30004199SMESG000017561.1 SMESG000017493.1 SMESG000006795.1 Contig36326newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30004199SMESG000017561.1 SMESG000017493.1 SMESG000006795.1 Contig36326uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30004199SMESG000006795.1 Contig14951newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30004199SMESG000006795.1 Contig14951uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
nervous systemSMED30004199 dd_Smed_v4_15100_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30004199 dd_Smed_v4_15100_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30004199 dd_Smed_v4_15100_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30004199 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.002221:3441..4991 -7559
v31.003907:56641..57940 +4989
v31.000267:168018..169316 -4973
Homology
[Close]
BLAST of SMED30004199 vs. Ensembl Human
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 62.3882 bits (150), Expect = 1.269e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 62.7734 bits (151), Expect = 2.184e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 62.7734 bits (151), Expect = 2.518e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 62.7734 bits (151), Expect = 2.639e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 63.1586 bits (152), Expect = 2.979e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 56.225 bits (134), Expect = 6.289e-9
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = -2 
Query: 1120 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILL 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
[Close]
BLAST of SMED30004199 vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 61.6178 bits (148), Expect = 2.393e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458
[Close]
BLAST of SMED30004199 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.5438 bits (153), Expect = 1.925e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458
[Close]
BLAST of SMED30004199 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 8 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 9 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 686

HSP 10 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 762

HSP 11 Score: 60.4622 bits (145), Expect = 2.106e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  791 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
[Close]
BLAST of SMED30004199 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 8 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 9 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 686

HSP 10 Score: 63.5438 bits (153), Expect = 2.505e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 762

HSP 11 Score: 60.4622 bits (145), Expect = 2.106e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  791 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
[Close]
BLAST of SMED30004199 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 60.8474 bits (146), Expect = 5.924e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
[Close]
BLAST of SMED30004199 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 60.8474 bits (146), Expect = 5.924e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
[Close]
BLAST of SMED30004199 vs. Ensembl Fly
Match: CG11700 (gene:FBgn0029856 transcript:FBtr0333520)

HSP 1 Score: 62.003 bits (149), Expect = 2.925e-10
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
             DKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 HDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 2 Score: 51.9878 bits (123), Expect = 5.157e-7
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKE  PPE Q LIF G+ L +  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQ 78

HSP 3 Score: 51.9878 bits (123), Expect = 5.157e-7
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKE  PPE Q LIF G+ L +  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQ 154

HSP 4 Score: 49.6766 bits (117), Expect = 3.453e-6
Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = -2 
Query: 1135 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCR 1248
             DK+GIPP+ Q LIFAG+QL D  T+S+Y IQ  ST  
Sbjct:  259 HDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
[Close]
BLAST of SMED30004199 vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016)

HSP 1 Score: 59.3066 bits (142), Expect = 3.030e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0345892)

HSP 1 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.1586 bits (152), Expect = 3.183e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 60.077 bits (144), Expect = 2.730e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
[Close]
BLAST of SMED30004199 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 60.4622 bits (145), Expect = 3.679e-11
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG +
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 61.2326 bits (147), Expect = 4.574e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 63.1586 bits (152), Expect = 8.697e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 8.697e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 58.151 bits (139), Expect = 4.046e-9
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L G +
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGAI 229
[Close]
BLAST of SMED30004199 vs. Ensembl Zebrafish
Match: nedd8l (NEDD8 ubiquitin like modifier, like [Source:ZFIN;Acc:ZDB-GENE-040718-295])

HSP 1 Score: 58.5362 bits (140), Expect = 1.381e-10
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T ++Y IQ GS   LV+ L GG
Sbjct:   31 EEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Zebrafish
Match: CR848813.2 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_42:42047434:42048357:1 gene:ENSDARG00000116968.1 transcript:ENSDART00000187237.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR848813.2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.779e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 1.779e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.1586 bits (152), Expect = 1.779e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 60.077 bits (144), Expect = 1.648e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
[Close]
BLAST of SMED30004199 vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 61.2326 bits (147), Expect = 6.392e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 63.1586 bits (152), Expect = 1.233e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 1.233e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 60.4622 bits (145), Expect = 8.494e-10
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 229
[Close]
BLAST of SMED30004199 vs. Ensembl Xenopus
Match: nedd8 (neural precursor cell expressed, developmentally down-regulated 8 [Source:NCBI gene;Acc:549727])

HSP 1 Score: 57.7658 bits (138), Expect = 3.499e-10
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T ++Y IQ GS   LV+ L GG
Sbjct:   31 EEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 59.3066 bits (142), Expect = 6.881e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 62.7734 bits (151), Expect = 1.045e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   42 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 89

HSP 2 Score: 62.7734 bits (151), Expect = 1.045e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  118 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 165

HSP 3 Score: 62.7734 bits (151), Expect = 1.045e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  194 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 241

HSP 4 Score: 62.7734 bits (151), Expect = 1.045e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  270 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 317

HSP 5 Score: 62.3882 bits (150), Expect = 1.332e-9
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+      +++H++
Sbjct:  346 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLILINPFQQQHQY 404

HSP 6 Score: 60.4622 bits (145), Expect = 4.331e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+ +Y IQ  ST  LV+ L GGM+
Sbjct:  542 QDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGMQ 589

HSP 7 Score: 60.4622 bits (145), Expect = 4.331e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+ +Y IQ  ST  LV+ L GGM+
Sbjct:  618 QDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGMQ 665

HSP 8 Score: 58.9214 bits (141), Expect = 1.370e-8
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  ++++Y IQ  ST  LV+ L GGM+
Sbjct:  466 QDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLRGGMQ 513

HSP 9 Score: 58.151 bits (139), Expect = 2.960e-8
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+ +Y IQ  ST  LV+ L GG 
Sbjct:  694 QDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGF 740
[Close]
BLAST of SMED30004199 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 61.2326 bits (147), Expect = 2.673e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 61.2326 bits (147), Expect = 4.841e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 61.2326 bits (147), Expect = 4.841e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 61.2326 bits (147), Expect = 4.841e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 61.2326 bits (147), Expect = 4.841e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. UniProt/SwissProt
Match: sp|P23398|UBIQP_STRPU (Polyubiquitin (Fragment) OS=Strongylocentrotus purpuratus OX=7668 PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 8.923e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   11 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 58

HSP 2 Score: 60.077 bits (144), Expect = 9.732e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   87 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 132
[Close]
BLAST of SMED30004199 vs. UniProt/SwissProt
Match: sp|P14794|RL40_DICDI (Ubiquitin-60S ribosomal protein L40 OS=Dictyostelium discoideum OX=44689 GN=ubqB PE=1 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 1.638e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+E
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIE 78
[Close]
BLAST of SMED30004199 vs. UniProt/SwissProt
Match: sp|P62972|UBIQP_XENLA (Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 2.179e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   46 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 93

HSP 2 Score: 60.077 bits (144), Expect = 2.279e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  122 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 167
[Close]
BLAST of SMED30004199 vs. UniProt/SwissProt
Match: sp|P19848|UBIQ_COPCO (Ubiquitin OS=Coprinellus congregatus OX=5347 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.795e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of SMED30004199 vs. UniProt/SwissProt
Match: sp|P49632|RL40_CAEEL (Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans OX=6239 GN=ubq-2 PE=3 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 3.044e-10
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. TrEMBL
Match: A0A2B4RC04 (Uncharacterized protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene20623 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-13
Identity = 55/167 (32.93%), Postives = 82/167 (49.10%), Query Frame = -2 
Query:  220 QLKEETGRSIGYTKMSV--KTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAMVKKLPECLM 714
            Q K ET R      M +    + +LK + IPLF G    Y  W+A F+A ++ A    E KLL LRQ LS E  + +   G S++AY  A   L  +YG   R      E + NF+P++     ++E F ++L      LK + +  EL  G LY  + KK+ E ++
Sbjct:  264 QEKAETARGKVSQAMEIGQDLWKQLKGVSIPLFNGDKTNYESWKAAFEACIDKA----EYKLLQLRQYLSGEALKAIENLGHSASAYEAAKSRLEGKYGGRRRQIALHLEELDNFKPVRPGHPKDIERFADILDIAVVNLKEVRRYEELGNGSLYAKLQKKMTEQML 426
[Close]
BLAST of SMED30004199 vs. TrEMBL
Match: A0A2B4RR18 (Integrase catalytic domain-containing protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene16829 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.773e-12
Identity = 56/180 (31.11%), Postives = 93/180 (51.67%), Query Frame = -2 
Query:  115 RLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQ-SELQGGFLYLAMVKKLPECLMREWTE*RAVKGINKDVKTLTDWVVQLSEIKRSALE 651
            +L++I IP F G  ++YS W A F + V+    S + K+L L+  L  E    V   G+SS AY  A   L ++YG   R   A  + +   +P+ +E+  ELE F +L+      LK   K  S+L+GG L   +++K+P+ L+ ++      KG  +  + L +WV + +E +  A E
Sbjct: 1094 QLERIRIPKFSGDKMKYSAWWAAFSSCVDETSLSPQFKILRLKGCLEGEAAATVRGLGYSSEAYKAAKARLNRKYGGNRRQVQAHIDELRRMKPLNAENPRELERFADLVERTVVTLKENKKHTSDLEGGTLCAIVLEKIPQSLLSQYYRWVKEKGKLESFEELREWVAEEAEYQIQASE 1273
[Close]
BLAST of SMED30004199 vs. TrEMBL
Match: A0A2B4R783 (Uncharacterized protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene23326 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.195e-12
Identity = 49/175 (28.00%), Postives = 87/175 (49.71%), Query Frame = -2 
Query:  151 KMSVKTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAMVKKLPECLMREWTE*RAVKGINKDVKTLTDWV 675
            ++S+ +   LK++ IP + G     + W+A F + V+    + + KLL LR+ L  E  RV+   G S+ AY  A   L ++YG   R      E +  F+ ++  S  +LE F ELL  L   L    ++ EL+ G LY+ + +K  + L+ +  +       ++DV  L +++
Sbjct:   82 QLSIDSSAALKRVSIPRYAGYKKHCASWKAAFCSCVDQVKAAPQYKLLRLRECLQGEALRVIENLGHSTTAYEAARSRLERKYGGEGRALTLRLEELEAFKQLREGSKKDLEKFAELLDALVVNLIDAKQEGELRNGSLYITLHRKFNKNLLAKCKQWICDNRKSEDVNVLREFI 256
[Close]
BLAST of SMED30004199 vs. TrEMBL
Match: A0A2B4R8Z1 (Uncharacterized protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene21000 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.396e-10
Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = -2 
Query:  190 MSVKTFDRL----KKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQG-GFLYLAMVKKLPECLM---REWTE*RAVK 672
            +  K FDRL    KK  + +F G    Y  W+A F+ +V+      + K++ L+ +L+ +P RVV R G++S  Y  AL+ L ++ G  +R      E + +  P++  +  ELE F + L  +  +L+   +  E  G   LY+ + +KL E L+   +EW   R  K
Sbjct:  360 LDSKDFDRLFKGIKKPALTVFSGDKNLYHDWKAQFEIFVDRMKAPAKTKMMMLKNSLTGKPLRVVERLGYTSKHYQTALQKLDQKNGGEERLLQRYLEAILHASPVEEANLKELEIFSDRLIDIVAKLEDSDQHQEQAGVSALYIVVQQKLAESLLITYQEWLHRRPRK 528
[Close]
BLAST of SMED30004199 vs. TrEMBL
Match: A0A085MYX7 (Uncharacterized protein OS=Trichuris suis OX=68888 GN=M513_00876 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.832e-10
Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = -2 
Query:  136 RLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAMVKKLPECLMREWTE--*RAVKGINKDVKTLTDWVVQLSE 651
            RL K+EIP F G  +E+  + + F   V+S   S+ ++L  LR+ L+ +  + + ++ +    Y +AL  L +RYG   R   A  + V+   P     +G L AF + L ++   L   G + E+        +VKK+P  L  EW +   R+++     ++ L+DW+ +  E
Sbjct:  197 RLPKLEIPRFAGDPMEWPMFSSAFHQSVHSVLNSDADRLCILRELLAPQVRKAMAKYLYDPRQYTQALEVLQRRYGDPRRLVRACLKSVAALRPWHDFDYGGLRAFSDELQSIVSVLSLGGHEVEICSSTNVNTVVKKMPRQLRDEWGQFVIRSIRPRFPSLQDLSDWIRERRE 370
[Close]
BLAST of SMED30004199 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 61.2326 bits (147), Expect = 3.876e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 61.2326 bits (147), Expect = 3.876e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Cavefish
Match: nedd8l (NEDD8-like [Source:NCBI gene;Acc:103044361])

HSP 1 Score: 59.3066 bits (142), Expect = 6.202e-11
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T S+Y IQ GS   LV+ L GG
Sbjct:   31 EEKEGIPPQQQRLIYSGKQMNDEKTASDYKIQGGSVLHLVLALRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Cavefish
Match: nedd8 (NEDD8 [Source:NCBI gene;Acc:103040682])

HSP 1 Score: 58.9214 bits (141), Expect = 1.042e-10
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T ++Y IQ GS   LV+ L GG
Sbjct:   31 EEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 62.7734 bits (151), Expect = 3.159e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   38 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 85

HSP 2 Score: 62.7734 bits (151), Expect = 3.159e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  114 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 161

HSP 3 Score: 62.7734 bits (151), Expect = 3.159e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  190 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 237

HSP 4 Score: 62.7734 bits (151), Expect = 3.159e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  342 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 389
[Close]
BLAST of SMED30004199 vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 62.7734 bits (151), Expect = 6.296e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   44 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 91

HSP 2 Score: 62.7734 bits (151), Expect = 6.296e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  120 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 167

HSP 3 Score: 62.7734 bits (151), Expect = 6.296e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  196 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 243

HSP 4 Score: 62.7734 bits (151), Expect = 6.296e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  272 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 319

HSP 5 Score: 62.7734 bits (151), Expect = 6.296e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  348 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 395
[Close]
BLAST of SMED30004199 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007011.1 (pep scaffold:Pmarinus_7.0:GL484716:14406:16135:-1 gene:ENSPMAG00000006335.1 transcript:ENSPMAT00000007011.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 45.0542 bits (105), Expect = 3.405e-6
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = -2 
Query: 1111 GIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1236
            GIPP++Q  IFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:    1 GIPPDQQ-RIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 41
[Close]
BLAST of SMED30004199 vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 60.8474 bits (146), Expect = 8.069e-12
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
[Close]
BLAST of SMED30004199 vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 60.8474 bits (146), Expect = 8.069e-12
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query: 1108 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
[Close]
BLAST of SMED30004199 vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 63.5438 bits (153), Expect = 2.294e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.5438 bits (153), Expect = 2.294e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.5438 bits (153), Expect = 2.294e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.5438 bits (153), Expect = 2.294e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 60.4622 bits (145), Expect = 2.086e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
[Close]
BLAST of SMED30004199 vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157])

HSP 1 Score: 54.299 bits (129), Expect = 2.232e-9
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = -2 
Query: 1129 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLV 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
[Close]
BLAST of SMED30004199 vs. Ensembl Yeast
Match: RUB1 (Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme) [Source:SGD;Acc:S000002546])

HSP 1 Score: 44.669 bits (104), Expect = 1.033e-6
Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP +Q LIF G+Q+ D+ TV++  +  G    LV+ L GG
Sbjct:   31 EEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 63.5438 bits (153), Expect = 4.242e-12
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78
[Close]
BLAST of SMED30004199 vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 63.1586 bits (152), Expect = 2.532e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 2.532e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 58.9214 bits (141), Expect = 6.824e-10
Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q  IFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  183 QDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
[Close]
BLAST of SMED30004199 vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.1586 bits (152), Expect = 1.218e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 60.077 bits (144), Expect = 1.035e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
[Close]
BLAST of SMED30004199 vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 58.9214 bits (141), Expect = 1.920e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Nematostella
Match: EDO31255 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYF9])

HSP 1 Score: 49.6766 bits (117), Expect = 4.454e-8
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = -2 
Query: 1141 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGST 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ G++
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKGNS 66
[Close]
BLAST of SMED30004199 vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 61.6178 bits (148), Expect = 3.530e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 
Query: 1072 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKW 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG+   + R+   K+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKY 89
[Close]
BLAST of SMED30004199 vs. Ensembl Medaka
Match: ENSORLT00000033696.1 (pep primary_assembly:ASM223467v1:18:18100789:18102949:1 gene:ENSORLG00000024017.1 transcript:ENSORLT00000033696.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.7658 bits (138), Expect = 3.008e-10
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T ++Y IQ GS   LV+ L GG
Sbjct:   30 EEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 75
[Close]
BLAST of SMED30004199 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 59.3066 bits (142), Expect = 3.730e-10
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of SMED30004199 vs. Ensembl Medaka
Match: ENSORLT00000041155.1 (pep primary_assembly:ASM223467v1:17:17794475:17794948:1 gene:ENSORLG00000027923.1 transcript:ENSORLT00000041155.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.3806 bits (137), Expect = 3.898e-10
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            ++KEGIPP++Q LI++G+Q++DE T ++Y IQ GS   LV+ L GG
Sbjct:   34 EEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 79
[Close]
BLAST of SMED30004199 vs. Ensembl Medaka
Match: ubb (ubiquitin C [Source:NCBI gene;Acc:101172100])

HSP 1 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 2 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  584 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 631

HSP 8 Score: 63.1586 bits (152), Expect = 4.107e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GGM+
Sbjct:  660 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 707

HSP 9 Score: 60.077 bits (144), Expect = 3.458e-9
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2 
Query: 1111 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGG 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L GG
Sbjct:  736 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 781

HSP 10 Score: 59.6918 bits (143), Expect = 4.888e-9
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = -2 
Query:  901 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKWLK-----LGIDSRRLQKSKLTRSFTRATEDL-SLEDLKVRRRKYEEISEEVQKEWIELKALAD 1248
            QDKEGIPP++Q LIFAG+QL D  T+S+Y IQ  ST  LV+ L G +     R+ +++ LK      G++ +   K+   ++ T   E   ++E++K + +  E I  + Q+     K L D
Sbjct:  487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVV---YIRDNKYQILKAKSFFTGVNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 605
[Close]
BLAST of SMED30004199 vs. Planmine SMEST
Match: SMESG000080111.1 (SMESG000080111.1)

HSP 1 Score: 225.328 bits (573), Expect = 9.262e-71
Identity = 138/215 (64.19%), Postives = 160/215 (74.42%), Query Frame = -2 
Query:  487 LLGGMEGEASREERHKWLKLGIDSRRLQKSKLTRSFTRATEDLSLEDLKVRRRKYEEISEEVQKEWIELKALAD---EQEIAMRFEQQLDAIESRDECLANKVAEESFKVVSQQLXXXXXXXXXXIV*ENRFNEMKQPVQLKEETGRSIGYTKMSVKTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVN 1122
            ++GGME E+++E+R   LKLG  +RRLQKSKLTRSFTRATEDL +EDLK   RKYEE  EEVQKEWIELK L     EQEI   F ++L+AIE+RDE      AE+SFK+  QQ SIR SSR S  + ENRF E KQPVQ+KE T R  G+T+MSV+T DRLKK       GKTLE   WRATFDAY NSACGSNEEK+L+LRQAL +EPFRVVN
Sbjct:    3 VVGGMERESAKEKRQNKLKLGDQNRRLQKSKLTRSFTRATEDLLVEDLK--ERKYEETFEEVQKEWIELKTLTGDLYEQEIVTHFGKKLNAIETRDE----NSAEKSFKLGLQQGSIRDSSRSSIEL-ENRFVEKKQPVQMKEHTDRGTGFTEMSVRTLDRLKK-RFQFSGGKTLECFQWRATFDAYANSACGSNEEKILYLRQALKEEPFRVVN 209
[Close]
BLAST of SMED30004199 vs. Planmine SMEST
Match: SMESG000015210.1 (SMESG000015210.1)

HSP 1 Score: 177.563 bits (449), Expect = 2.405e-52
Identity = 96/167 (57.49%), Postives = 120/167 (71.86%), Query Frame = -2 
Query:  247 ENRFNEMKQPVQLKEETGRSIGYTKMSVKTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAM 747
            E+RF+E    VQL+          K S+K  D+LKKIEI +F GKTLEYS WR TF+AYV+S   + +EKLL LRQ L +E F+VVN+FGF+++AY  AL WL KRYG T+R FLAISE VS F+PI  ES  +LE+F ELL++LT RLK LGKQ+ELQ GFLY  +
Sbjct:   56 ESRFHE---EVQLQIGKLMKNVVKKTSIKRLDKLKKIEIVVFNGKTLEYSQWRTTFNAYVDSVVRTKKEKLLLLRQFLKEELFKVVNQFGFTADAYDAALTWLDKRYGGTERSFLAISEDVSIFKPINLESIRDLESFQELLNSLTLRLKDLGKQNELQVGFLYQVL 219
[Close]
BLAST of SMED30004199 vs. Planmine SMEST
Match: SMESG000005195.1 (SMESG000005195.1)

HSP 1 Score: 161.384 bits (407), Expect = 9.088e-48
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = -2 
Query:  790 MEGEASREERHKWLKLGIDSRRLQKSKLTRSFTRATEDLSLEDLKVRRRKYEEISEEVQKEWIELKALA---DEQEIAMRFEQQLDAIESRDECLANKVAEESFKVVSQQ 1110
            MEG+ASREER K LKLGIDSRR QKS+LTR+F RATEDLS+EDLK  RRKYEE  EEVQKEWIELKALA   DEQEIAMRF+Q+LD IESRDE LANKVAEESFKVVS+Q
Sbjct:    1 MEGKASREERQKRLKLGIDSRRCQKSRLTRAFIRATEDLSVEDLK-ERRKYEETFEEVQKEWIELKALADDLDEQEIAMRFKQELDVIESRDERLANKVAEESFKVVSEQ 109
[Close]
BLAST of SMED30004199 vs. Planmine SMEST
Match: SMESG000011728.1 (SMESG000011728.1)

HSP 1 Score: 150.984 bits (380), Expect = 7.922e-39
Identity = 130/450 (28.89%), Postives = 199/450 (44.22%), Query Frame = -2 
Query:   52 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGM--------------EGEASR-------EERHKWLKL-------------------------GIDSRRLQKSKLTRSFTRATEDLSLEDLKVRRRKYEEISEEVQKEWIELKALADE-QEIA--MRFEQQLDAIESRDECLANKVAEESFKVVSQQLXXXXXXXXXXIV*ENRFNEMKQPVQLKEETGRSIGYTKMSVKTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAMVKKLPECLMREW--TE*RAVKGINKDVKTLTDWVVQLSEIKRSALEELYGFHHLEKDELKPHSLYQK 1248
            QDKEG PP++Q LIFAG+QL D  T+S+Y IQ  S   L + L  GM              E E S         + H  L+                          G+      K+KLTRS  R    L   D      +Y    EEV     +LK L ++ ++IA   + E+ ++ I  RDE L N++   + K +                        K+  + K E      YT     T D+LK++ IP+F G+  E+  W+A F+  VN A GS EEKL HLR+ L  EP ++++  G+S+ AY  +L  L   YG  +R +  + + +  F PI+     + E    L+ TL  RL+ +G+ +EL  GF++  +++KL   ++ EW      +  G +K VK L  W+    +  R A+ E+ G     +   +  S Y K
Sbjct:  238 QDKEGFPPDQQRLIFAGKQLEDGRTLSDYHIQKESALHLGLRLRSGMQIFVKTLTGKTITLEVEPSDTIESVKLNDNHTLLEFNVRRGSTLHLALRLKGGNDEEEFCDGMSKISSTKNKLTRSRNRVKLSLEQSDGSQVYERYLGEQEEVINRLTQLKLLGNKIRKIAEVKKIEKDINEIMERDETLNNQIEVMTNKKLG-----------------------KESSKTKSEE-----YTP----TLDKLKRLTIPVFNGQIREFPAWKAAFEVRVNKALGSKEEKLQHLREYLVGEPLKLIDTLGYSAGAYDASLERLESNYGGEERLYRNLLQELERFRPIREGQIRDFENLLSLIGTLVVRLEDMGRDNELGAGFIFEKLLQKLSHSVLDEWLTNYDNSKNGSDKAVKILQGWLGSKLQRTRQAM-EIKGTMEFRRTNYEERSAYNK 654
[Close]
BLAST of SMED30004199 vs. Planmine SMEST
Match: SMESG000041215.1 (SMESG000041215.1)

HSP 1 Score: 147.902 bits (372), Expect = 2.215e-37
Identity = 117/405 (28.89%), Postives = 196/405 (48.40%), Query Frame = -2 
Query:   52 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGMEGEASREERHKWLKLGIDSRRLQKSKLTRSFTRATEDLSLEDLKVRRRKYEEISEEVQKEWIELKALADE-QEIA--MRFEQQLDAIESRDECLANKVAEESFKVVSQQLXXXXXXXXXXIV*ENRFNEMKQPVQLKEETGRSIGYTKMSVKTFDRLKKIEIPLFRGKTLEYS*WRATFDAYVNSACGSNEEKLLHLRQALSDEPFRVVNRFGFSSNAYVEALRWLGKRYGSTDRGFLAISEVVSNFEPIKSESFGELEAF*ELLSTLTFRLKALGKQSELQGGFLYLAMVKKLPECLMREW--TE*RAVKGINKDVKTLTDWVVQLSEIKRSA-LEELYGFHHLEKDELKPHSLYQK 1248
            Q KEG+ P +Q LI+AG+QL+  +T+ E+ ++ GS   L + L GG + E   +        G+      K+KLTRS  R    L   D      +Y    EEV     +LK L ++  ++A   + E+ ++ I  RDE L N++   + K +                             ++    +S  YT     T D+LK++ IP+F G+  E   W+A F+  VN A GS EEKL HLR+ L  +P ++++  G+S+ AY  AL  L   YG  +R +  + + +  F+PI+     + E    L+ TL  RL+ +G+++EL  GF++  +++KL   ++ EW      +  G +K VK L  W+   S+++R+  + E+ G     +   +  S Y K
Sbjct:  322 QHKEGVLPVQQRLIWAGKQLNGNHTLLEFNVRKGSNLHLALRLKGGNDEEEFCD--------GMSKISSTKNKLTRSRNRVKLSLEQSDGSEVYERYLGEQEEVINRLTQLKLLGNKIGKVAEVKKIEKDINEIMERDETLNNQIEVMTNKKLG----------------------------IESSKTKSEEYTP----TLDKLKRLTIPVFNGQIRESPAWKAAFEVRVNKALGSKEEKLQHLREYLFGKPLKLIDTLGYSAGAYDAALERLETNYGGEERLYRNLLQELERFKPIREGQIRDFENLLSLIGTLVVRLENMGRENELGAGFIFEKLLQKLSHSVLDEWLTNYDNSKNGSDKAVKILQGWLG--SKLQRTKQVMEIKGTMEFRRTNYEERSAYNK 684

HSP 2 Score: 50.0618 bits (118), Expect = 4.170e-6
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = -2 
Query: 1105 QDKEGIPPEKQVLIFAGQQLSDENTVSEYAIQAGSTCRLVILLLGGME 1248
            QDKE  PP++Q LIFAG+QL D  T+ +Y IQ  ST  L + L  GM+
Sbjct:  246 QDKEEFPPDQQKLIFAGKQLEDGRTLFDYNIQKESTLHLGLRLRSGMQ 293
The following BLAST results are available for this feature:
BLAST of SMED30004199 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
UBB1.269e-1162.50ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463][more]
UBC2.184e-1162.50ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468][more]
UBC2.518e-1162.50ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468][more]
UBC2.639e-1162.50ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468][more]
UBC2.979e-1162.50ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468][more]
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BLAST of SMED30004199 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ubq-22.393e-1152.54Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ... [more]
ubq-11.925e-1062.50Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-11.925e-1062.50Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-12.505e-1062.50Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-12.505e-1062.50Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
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BLAST of SMED30004199 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RpL405.924e-1161.70gene:FBgn0003941 transcript:FBtr0334787[more]
RpL405.924e-1161.70gene:FBgn0003941 transcript:FBtr0077470[more]
CG117002.925e-1060.42gene:FBgn0029856 transcript:FBtr0333520[more]
RpS27A3.030e-1063.04gene:FBgn0003942 transcript:FBtr0080016[more]
Ubi-p5E3.183e-1062.50gene:FBgn0086558 transcript:FBtr0345892[more]
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BLAST of SMED30004199 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ubb3.679e-1160.42ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10][more]
uba524.574e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
ubb8.697e-1162.50ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10][more]
nedd8l1.381e-1052.17NEDD8 ubiquitin like modifier, like [Source:ZFIN;A... [more]
CR848813.21.779e-1062.50pep chromosome:GRCz11:CHR_ALT_CTG5_1_42:42047434:4... [more]
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BLAST of SMED30004199 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba526.392e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
ENSXETT00000033679.11.233e-1062.50ubiquitin C [Source:NCBI gene;Acc:448120][more]
nedd83.499e-1052.17neural precursor cell expressed, developmentally d... [more]
rps27a6.881e-1063.04ribosomal protein S27a [Source:NCBI gene;Acc:54892... [more]
pdcd111.045e-962.50programmed cell death 11 [Source:Xenbase;Acc:XB-GE... [more]
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BLAST of SMED30004199 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Uba522.673e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Gm118084.841e-1152.54predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36... [more]
Uba524.841e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Uba524.841e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Uba524.841e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
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BLAST of SMED30004199 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P23398|UBIQP_STRPU8.923e-1162.50Polyubiquitin (Fragment) OS=Strongylocentrotus pur... [more]
sp|P14794|RL40_DICDI1.638e-1062.50Ubiquitin-60S ribosomal protein L40 OS=Dictyosteli... [more]
sp|P62972|UBIQP_XENLA2.179e-1062.50Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355... [more]
sp|P19848|UBIQ_COPCO2.795e-1063.04Ubiquitin OS=Coprinellus congregatus OX=5347 PE=1 ... [more]
sp|P49632|RL40_CAEEL3.044e-1052.54Ubiquitin-60S ribosomal protein L40 OS=Caenorhabdi... [more]
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BLAST of SMED30004199 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2B4RC042.271e-1332.93Uncharacterized protein OS=Stylophora pistillata O... [more]
A0A2B4RR182.773e-1231.11Integrase catalytic domain-containing protein OS=S... [more]
A0A2B4R7834.195e-1228.00Uncharacterized protein OS=Stylophora pistillata O... [more]
A0A2B4R8Z12.396e-1029.59Uncharacterized protein OS=Stylophora pistillata O... [more]
A0A085MYX73.832e-1027.59Uncharacterized protein OS=Trichuris suis OX=68888... [more]
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BLAST of SMED30004199 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba523.876e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
uba523.876e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
nedd8l6.202e-1154.35NEDD8-like [Source:NCBI gene;Acc:103044361][more]
nedd81.042e-1052.17NEDD8 [Source:NCBI gene;Acc:103040682][more]
si:ch211-202a12.43.159e-1062.50ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463][more]
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BLAST of SMED30004199 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
UBB6.296e-1162.50ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463][more]
ENSPMAT00000007011.13.405e-657.14pep scaffold:Pmarinus_7.0:GL484716:14406:16135:-1 ... [more]
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BLAST of SMED30004199 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
RPL40B8.069e-1261.70Ubiquitin-ribosomal 60S subunit protein L40B fusio... [more]
RPL40A8.069e-1261.70Ubiquitin-ribosomal 60S subunit protein L40A fusio... [more]
UBI42.294e-1162.50Ubiquitin; becomes conjugated to proteins, marking... [more]
RPS312.232e-965.00Fusion protein cleaved to yield ribosomal protein ... [more]
RUB11.033e-645.65Ubiquitin-like protein with similarity to mammalia... [more]
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BLAST of SMED30004199 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO455614.242e-1262.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO324032.532e-1162.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO325471.218e-1062.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO485031.920e-1063.04Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO312554.454e-863.89Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30004199 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba523.530e-1152.54ubiquitin A-52 residue ribosomal protein fusion pr... [more]
ENSORLT00000033696.13.008e-1052.17pep primary_assembly:ASM223467v1:18:18100789:18102... [more]
rps27a3.730e-1063.04ribosomal protein S27a [Source:NCBI gene;Acc:10116... [more]
ENSORLT00000041155.13.898e-1052.17pep primary_assembly:ASM223467v1:17:17794475:17794... [more]
ubb4.107e-1062.50ubiquitin C [Source:NCBI gene;Acc:101172100][more]
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BLAST of SMED30004199 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000080111.19.262e-7164.19SMESG000080111.1[more]
SMESG000015210.12.405e-5257.49SMESG000015210.1[more]
SMESG000005195.19.088e-4881.82SMESG000005195.1[more]
SMESG000011728.17.922e-3928.89SMESG000011728.1[more]
SMESG000041215.12.215e-3728.89SMESG000041215.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30004199 ID=SMED30004199|Name=SMED30004199|organism=Schmidtea mediterranea sexual|type=transcript|length=1549bp
TGATCTCGTTTATCAATTTACATTTATTGGGTTCCTATCATCATTTTCCA
TCTTTTGGTAAAGACTGTGAGGTTTTAATTCATCCTTCTCCAAATGGTGA
AATCCATATAACTCTTCTAAGGCCGATCGCTTTATTTCGGACAATTGCAC
AACCCAATCAGTCAATGTTTTAACGTCCTTATTTATCCCTTTTACTGCTC
TCTATTCTGTCCATTCCCTCATTAAGCATTCAGGTAACTTTTTTACCATA
GCTAAATACAAAAATCCGCCTTGAAGCTCGCTTTGCTTTCCTAGAGCCTT
CAATCGGAACGTCAATGTACTTAACAGCTCTCAAAATGCTTCTAGCTCAC
CAAATGATTCTGATTTGATTGGTTCAAAATTGCTTACCACTTCAGAAATC
GCCAAGAAGCCTCGATCCGTACTTCCATATCGTTTTCCCAACCATCTCAG
AGCTTCTACGTAAGCATTAGAAGAGAAACCAAAACGGTTTACAACCCTAA
ATGGTTCATCGCTTAACGCCTGTCGCAAATGGAGCAATTTCTCTTCATTT
GATCCGCATGCAGAATTCACGTAGGCATCAAATGTTGCTCGCCATTAAGA
GTATTCCAATGTCTTTCCTCTGAACAGTGGAATCTCTATTTTCTTTAATC
TGTCAAATGTTTTTACCGACATTTTTGTATAACCTATGCTCCTGCCCGTT
TCCTCTTTTAACTGCACAGGCTGTTTCATTTCGTTGAACCGGTTTTCCTA
CACAATCGAACTCCTTCTTGATGAGCCTCGAATGGATAACTGTTGCGACA
CCACCTTAAAGCTTTCTTCCGCCACCTTGTTTGCTAAGCACTCATCGCGA
CTTTCGATCGCATCTAACTGTTGTTCAAAACGCATAGCAATTTCCTGTTC
ATCAGCCAAGGCTTTTAATTCGATCCATTCCTTTTGCACCTCTTCAGAAA
TTTCTTCGTACTTCCTTCTTCTAACTTTCAAATCCTCCAGTGAAAGATCT
TCAGTCGCTCTCGTGAAGGATCTTGTTAACTTTGACTTTTGTAATCTTCG
ACTATCAATTCCTAATTTTAGCCACTTATGTCTTTCTTCTCTTGAAGCTT
CTCCTTCCATGCCTCCCAACAACAGTATCACCAAACGACACGTCGATCCG
GCCTGAATTGCATACTCCGATACGGTATTTTCGTCACTCAATTGCTGCCC
CGCAAAGATTAAAACTTGTTTTTCTGGGGGAATACCTTCCTTGTCTTGCA
CTTTTTTCTTCACCTCACGATGATGCACTTTTTTCAGACCAAAACAGTAA
AAACTATTGTTTTACCTGATAAGGTGATCAAGCAGGTACCGTAACTCTTT
TATTTATCATATATTTACTCCAAATATTTTAGATATTAAAATTATTATTT
ATATTTAATTTAAATTTAATTAAAGAAAAGATCTTACAATTAAACCCCCC
CCGAACTTCCAAAGAAACGTGGTTCTCATATGAGAACCACTCTCTGCTAC
CAATGTTTGATTAAATGCAGTCTGGTCCGAATCAGCATCCATTAATTTA
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protein sequence of SMED30004199-orf-1

>SMED30004199-orf-1 ID=SMED30004199-orf-1|Name=SMED30004199-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=121bp
MEGEASREERHKWLKLGIDSRRLQKSKLTRSFTRATEDLSLEDLKVRRRK
YEEISEEVQKEWIELKALADEQEIAMRFEQQLDAIESRDECLANKVAEES
FKVVSQQLSIRGSSRRSSIV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin_dom
IPR000626Ubiquitin-like_dom
IPR019954Ubiquitin_CS
IPR029071Ubiquitin-like_domsf
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding