DUF3421 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30004057 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Homology
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Match: CG10527 (gene:FBgn0034583 transcript:FBtr0071541) HSP 1 Score: 95.5153 bits (236), Expect = 8.026e-23 Identity = 59/140 (42.14%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 360 WQNASNGHVPPNSVSAG-DS----YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDG-GKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEI 761 W A+NG VPPN++ G DS YIARA H G+ IPGKL ++ + G E +EY+VL G QW P NIP A+ G G+PL++GRA +G + GK P HGC YIPYG +E + + EI Sbjct: 159 WVPAANGEVPPNALEGGFDSSEQLYIARARHEGDLIPGKLHPSHGVTYVAWGGGEHGHAEYEVLCA------GGGQWLPVDAGNIPPNALPAGETAEGEPLFIGRATHDGTITVGKVQPSHGCCYIPYGGEELAYKEFEI 292 HSP 2 Score: 63.5438 bits (153), Expect = 2.270e-11 Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 3 Query: 573 WKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 W P + +P A+ GG D + LY+ RAR EG ++ GK P HG TY+ +G EH ++ E+LC Sbjct: 159 WVPAANGEVPPNALEGGFDSSEQLYIARARHEGDLIPGKLHPSHGVTYVAWGGGEHGHAEYEVLC 223
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Match: CG13321 (gene:FBgn0033787 transcript:FBtr0345371) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-22 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 378 GHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAI-IGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 G +PP ++ AG ++ RA HNGE +P K+V G+ A++ + G E+ +++VLV GD + W P SG ++P AI +G G+PLYVGR +G + GK P H C YIPYG +EH E+L Sbjct: 13 GSLPPGAILAGHDSDQDPIFVGRAYHNGEMLPAKVVPGKQQAYVPWGGQEISKHDFEVLV-----GDH-FSWIPSSGGSVPPHAIQVGQTGEGEPLYVGRGYFQGSLTPGKVHPSHQCLYIPYGGQEHRLEAYEVLV 143 HSP 2 Score: 83.9593 bits (206), Expect = 1.179e-18 Identity = 52/145 (35.86%), Postives = 69/145 (47.59%), Query Frame = 3 Query: 354 LSWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDG-GKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 SW +S G VPP+++ G + Y+ R G PGK+ +I Y G E Y+VLV + W SG I G ++GG D G +YVGRA EG +L K +P GC Y+PYG E K D E+L Sbjct: 76 FSWIPSSGGSVPPHAIQVGQTGEGEPLYVGRGYFQGSLTPGKVHPSHQCLYIPYGGQEHRLEAYEVLVQPET-------WIASSGRGIVPGTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCAYVPYGGGEVVKHDYELLA 213 HSP 3 Score: 72.0182 bits (175), Expect = 2.209e-14 Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 357 SWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAII-GGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 +W +S + P +V G Y+ RA H G+ +P K++ + A++ Y G EV+ +Y++L GY W S N+P A++ G G+PL++GRA G + GK H C YIP+ +E E+L Sbjct: 147 TWIASSGRGIVPGTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCAYVPYGGGEVVKHDYELLAGY------GYGWVHDSHGNVPGNAVLCGRTSDGEPLFIGRAHHHGSLTPGKIHQSHHCLYIPFDGEEVRIDHYEVLV 284
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Match: CG13321 (gene:FBgn0033787 transcript:FBtr0087792) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-22 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 378 GHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAI-IGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 G +PP ++ AG ++ RA HNGE +P K+V G+ A++ + G E+ +++VLV GD + W P SG ++P AI +G G+PLYVGR +G + GK P H C YIPYG +EH E+L Sbjct: 13 GSLPPGAILAGHDSDQDPIFVGRAYHNGEMLPAKVVPGKQQAYVPWGGQEISKHDFEVLV-----GDH-FSWIPSSGGSVPPHAIQVGQTGEGEPLYVGRGYFQGSLTPGKVHPSHQCLYIPYGGQEHRLEAYEVLV 143 HSP 2 Score: 83.9593 bits (206), Expect = 1.179e-18 Identity = 52/145 (35.86%), Postives = 69/145 (47.59%), Query Frame = 3 Query: 354 LSWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDG-GKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 SW +S G VPP+++ G + Y+ R G PGK+ +I Y G E Y+VLV + W SG I G ++GG D G +YVGRA EG +L K +P GC Y+PYG E K D E+L Sbjct: 76 FSWIPSSGGSVPPHAIQVGQTGEGEPLYVGRGYFQGSLTPGKVHPSHQCLYIPYGGQEHRLEAYEVLVQPET-------WIASSGRGIVPGTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCAYVPYGGGEVVKHDYELLA 213 HSP 3 Score: 72.0182 bits (175), Expect = 2.209e-14 Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 357 SWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAII-GGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 +W +S + P +V G Y+ RA H G+ +P K++ + A++ Y G EV+ +Y++L GY W S N+P A++ G G+PL++GRA G + GK H C YIP+ +E E+L Sbjct: 147 TWIASSGRGIVPGTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCAYVPYGGGEVVKHDYELLAGY------GYGWVHDSHGNVPGNAVLCGRTSDGEPLFIGRAHHHGSLTPGKIHQSHHCLYIPFDGEEVRIDHYEVLV 284
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Match: CG44250 (gene:FBgn0265185 transcript:FBtr0339104) HSP 1 Score: 87.8113 bits (216), Expect = 4.156e-20 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 384 VPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVD-GGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 +PP +V G Y+ R+ H GE +P K+V + A++ Y G E + Y+VLV QG+ W P S +P A+ G G+PLYVGR G + GK P HGC YIP+G +E + E+L + +V Sbjct: 14 LPPYAVIGGHDSDRTPIYVGRSFHEGENLPAKVVPSKGCAYVAYGGAEHTKTHYEVLVG------QGFAWVPSSSGGVPPNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHPSHGCLYIPFGGQEVRINTYEVLIKQQHDV 148 HSP 2 Score: 82.8037 bits (203), Expect = 3.056e-18 Identity = 49/142 (34.51%), Postives = 65/142 (45.77%), Query Frame = 3 Query: 360 WQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 W AS + PP +V AG Y RA+H GE +P K+V + A++C+ G E Y+VL GY W C S P+ G G+ LY GR +G + G C YIPYG +E + EILC Sbjct: 149 WVPASPSYTPPGAVIAGHDSDRTPIYAGRAMHEGEMLPAKVVPSKGTAYVCFGGYEFQKPSYEVLTG------YGYVWMNCGHSIPPNAVTTGRARNGELLYYGRGHYQGSLTPGLISASQRCLYIPYGGREIRINSYEILC 284 HSP 3 Score: 81.2629 bits (199), Expect = 1.046e-17 Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 354 LSWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGK-PLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 +W +S+G VPPN+V +G + Y+ R H G GK+ +I + G EV + Y+VL+ Q W P S S P GA+I G D + P+Y GRA EG+ML K +P G Y+ +G E K E+L Sbjct: 75 FAWVPSSSGGVPPNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHPSHGCLYIPFGGQEVRINTYEVLIK-----QQHDVWVPASPSYTPPGAVIAGHDSDRTPIYAGRAMHEGEMLPAKVVPSKGTAYVCFGGYEFQKPSYEVLT 214
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Match: CG44250 (gene:FBgn0265185 transcript:FBtr0339105) HSP 1 Score: 88.1965 bits (217), Expect = 4.441e-20 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 384 VPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVD-GGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 +PP +V G Y+ R+ H GE +P K+V + A++ Y G E + Y+VLV QG+ W P S +P A+ G G+PLYVGR G + GK P HGC YIP+G +E + E+L + +V Sbjct: 25 LPPYAVIGGHDSDRTPIYVGRSFHEGENLPAKVVPSKGCAYVAYGGAEHTKTHYEVLVG------QGFAWVPSSSGGVPPNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHPSHGCLYIPFGGQEVRINTYEVLIKQQHDV 159 HSP 2 Score: 82.8037 bits (203), Expect = 3.417e-18 Identity = 49/142 (34.51%), Postives = 65/142 (45.77%), Query Frame = 3 Query: 360 WQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 W AS + PP +V AG Y RA+H GE +P K+V + A++C+ G E Y+VL GY W C S P+ G G+ LY GR +G + G C YIPYG +E + EILC Sbjct: 160 WVPASPSYTPPGAVIAGHDSDRTPIYAGRAMHEGEMLPAKVVPSKGTAYVCFGGYEFQKPSYEVLTG------YGYVWMNCGHSIPPNAVTTGRARNGELLYYGRGHYQGSLTPGLISASQRCLYIPYGGREIRINSYEILC 295 HSP 3 Score: 81.2629 bits (199), Expect = 1.074e-17 Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 354 LSWQNASNGHVPPNSVSAGDS------YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGK-PLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 +W +S+G VPPN+V +G + Y+ R H G GK+ +I + G EV + Y+VL+ Q W P S S P GA+I G D + P+Y GRA EG+ML K +P G Y+ +G E K E+L Sbjct: 86 FAWVPSSSGGVPPNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHPSHGCLYIPFGGQEVRINTYEVLIK-----QQHDVWVPASPSYTPPGAVIAGHDSDRTPIYAGRAMHEGEMLPAKVVPSKGTAYVCFGGYEFQKPSYEVLT 225
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Match: A0A1I8H8B2 (DUF3421 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig012514g1 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.567e-38 Identity = 76/159 (47.80%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAG-DSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQV--LGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHS-KSDSEILCFS 773 MS+V + +GIE+CLSW ASNG +P +V AG D Y+ARA H GE++PGKL AG + A++ Y EV SEY+VLV++++ G GYQW P G+++P GA++ G D G PLYV RA EG++ GK P+ C YI +G KEH D E+L + Sbjct: 1 MSRVNHNDIEGIELCLSWHPASNGDIPAGAVKAGEDCYVARAKHEGEWVPGKLSAGHTSAYVPYGDEEVPYSEYEVLVSSEIGHFG-CGYQWLPAKGNSVPKGALVSGYDNGAPLYVARATFEGEVCCGKAQPDLECAYISWGGKEHKIVDDYEVLTMN 158
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Match: A0A1I8I9L7 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020479g1 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.794e-35 Identity = 72/163 (44.17%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVS-AGDSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNT---QVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDS-EILCFSKRN 782 MS KSSGGKG+++CLSW NA+NG +P +VS GD ++AR +GE +PGK+ AG + + YDG E YQVL T + G G++W SG+ P A+I G D G+PLYV +A I+G+ AGK +P++G Y G EH K D E+L R+ Sbjct: 1 MSTFKSSGGKGVDLCLSWVNAANGEIPAGAVSIGGDVFVARCFSDGELLPGKVAAGHNSCYAPYDGEEKCCDTYQVLCETCNHGLTGGPGFEWVAWSGNTAPKHALISGSDQGRPLYVAKANIDGEWCAGKYIPDYGKAYFSCGGAEHEKEDDFEVLVMCTRS 163
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Match: Q5DHE4 (SJCHGC04453 protein OS=Schistosoma japonicum OX=6182 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.132e-34 Identity = 65/151 (43.05%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 333 GKGIEICLSWQNASNGHVPPNSVS-AGDSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLG-DQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKR 779 GKGI+I LSW A++G+VP N+++ +GD Y+ R+ H+G +IPGK V G + A+ +G E+ EY+VL +T + G ++GY+W+ SG N+P AII G+ G PLY+ R + G++ GK H C Y P+G EHS +D E+L + K+ Sbjct: 5 GKGIQIPLSWVPATDGNVPHNAINVSGDIYVIRSKHDGHWIPGKAVIGHNTAYYPMNGQEIKTREYEVLCDTSLSGHNKGYEWESESGGNVPKNAIIAGMSGNDPLYIARGSVNGEVCVGKVHYGHNCAYFPWGGNEHSVNDYEVLVWKKK 155
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Match: A0A5K4FBP2 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.112e-34 Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 333 GKGIEICLSWQNASNGHVPPNSVSAGDS-YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRN 782 GKGI+I LSW NG+VP N++S + Y+ R H+ ++IPGK G A+ Y G E EY+VL +T G QGY+W S N+P AIIGG+ G PLY+ +++I G+ GK H C YIP+G +EHS D E+L + KRN Sbjct: 5 GKGIQIPLSWVPDRNGNVPHNAISVTNGIYVVRCQHDRQWIPGKAANGHDTAYYPYGGEEKNTKEYEVLCDTSFSGHQGYEWVQASCGNVPKNAIIGGMSGNDPLYIAKSKINGETCVGKVHHGHECAYIPWGGQEHSVKDYEVLVWKKRN 155
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Match: A0A4Z2D8K2 (Natterin-4 OS=Schistosoma japonicum OX=6182 GN=EWB00_003361 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.348e-33 Identity = 65/147 (44.22%), Postives = 96/147 (65.31%), Query Frame = 3 Query: 333 GKGIEICLSWQNASNGHVPPNSVS-AGDSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLG-DQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 GKGI+I LSW A++G+VP N+V+ +GD Y+ R+ H+G +IPGK V G + A+ +G E+ EY+VL +T + G ++GY+W+ SG N+P AII G+ G PLY+ R + G++ GK H C Y P+G EHS +D E+L Sbjct: 5 GKGIQIPLSWVPATDGNVPHNAVNVSGDIYVIRSKHDGHWIPGKAVIGHNTAYYPMNGQEIKTREYEVLCDTSLSGHNKGYEWESESGGNVPKNAIIAGMSGNDPLYIARGSVNGEVCVGKVHYGHNCAYFPWGGNEHSVNDYEVLV 151
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Match: SMESG000029906.1 (SMESG000029906.1) HSP 1 Score: 218.779 bits (556), Expect = 4.423e-72 Identity = 102/159 (64.15%), Postives = 127/159 (79.87%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAGDSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 MS+VKS+ GKGIEI LSWQ ASNGH+P +SV+AG+SYIARA++NGEYIPGK+V GE+ A+ICYDG E+ SEY+VLV+T G Q Y+WK GS IP G++IGG D G+PLY+GRAR+ K+LAGK PEHGCTYIPY +E+ K D ++LCF KR V Sbjct: 1 MSKVKSAAGKGIEISLSWQKASNGHIPNDSVNAGNSYIARAVYNGEYIPGKIVRGENCAYICYDGKEISCSEYEVLVDTHNFGGQAYEWKSSRGSVIPKGSVIGGSDEGRPLYIGRARVADKLLAGKFQPEHGCTYIPYDSQENRKEDYDVLCFLKRRV 159
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Match: SMESG000074377.1 (SMESG000074377.1) HSP 1 Score: 169.474 bits (428), Expect = 9.813e-53 Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAGDS-YIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILC 767 MS+V S GKG+EIC+SWQ ASNG +P +V AG ++ RA NG+YIPGKL G G ++ Y G E+ + Y+ LV T VL + G+QWK G+N+PSGAI+GG D G+PLY+ R+ + G+ + GK P HGC Y P+G +EH K+ E+LC Sbjct: 1 MSKVSSQYGKGVEICVSWQKASNGEIPHRTVKAGGKCFVGRAQQNGQYIPGKLYEGHKGVYVSYGGKEICVNNYEALVETNVLHNDGFQWKYVDGNNVPSGAIVGGTDNGQPLYIARSEVNGEPVVGKYFPPHGCAYFPFGGEEHRKTGVEVLC 154
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Match: SMESG000074396.1 (SMESG000074396.1) HSP 1 Score: 166.392 bits (420), Expect = 1.644e-51 Identity = 75/161 (46.58%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAG-DSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLG-DQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 MS+V S G G+E+ LSW A+NG +PP +V AG +++ARA H+G+YIPGK V G + + + GVE + Y++LV + +LG +GY+WK +G N+P GA++GG++ G PLYV R+ IE +M+ GK P+HGC Y+PYG +EH ++E+LCF+ ++V Sbjct: 1 MSKVSSQYGAGVELSLSWVKANNGSIPPKAVRAGGQTFVARAKHDGQYIPGKFVEGYNEVFVSFGGVEHAKNYYEILVESSMLGGHKGYEWKWTNGENVPKGALVGGLNDGAPLYVARSFIEDQMVVGKYYPQHGCAYMPYGGEEHRVENAEVLCFTTKHV 161
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Match: SMESG000074378.1 (SMESG000074378.1) HSP 1 Score: 166.392 bits (420), Expect = 1.644e-51 Identity = 75/161 (46.58%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAG-DSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLG-DQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 MS+V S G G+E+ LSW A+NG +PP +V AG +++ARA H+G+YIPGK V G + + + GVE + Y++LV + +LG +GY+WK +G N+P GA++GG++ G PLYV R+ IE +M+ GK P+HGC Y+PYG +EH ++E+LCF+ ++V Sbjct: 1 MSKVSSQYGAGVELSLSWVKANNGSIPPKAVRAGGQTFVARAKHDGQYIPGKFVEGYNEVFVSFGGVEHAKNYYEILVESSMLGGHKGYEWKWTNGENVPKGALVGGLNDGAPLYVARSFIEDQMVVGKYYPQHGCAYMPYGGEEHRVENAEVLCFTTKHV 161
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Match: SMESG000029910.1 (SMESG000029910.1) HSP 1 Score: 162.54 bits (410), Expect = 4.585e-50 Identity = 76/160 (47.50%), Postives = 108/160 (67.50%), Query Frame = 3 Query: 309 MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSA-GDSYIARALHNGEYIPGKLVAGESGAHICYDGVEVMASEYQVLVNTQVLGDQGYQWKPCSGSNIPSGAIIGGVDGGKPLYVGRARIEGKMLAGKCLPEHGCTYIPYGCKEHSKSDSEILCFSKRNV 785 MS+V + G+ +EI +SWQ A +G +P ++V A G ++ARA HNGEYIPGKLV G S +CYDG E+ S YQVLV+T +L GY+WK IP AIIGG D G+PL++ ++ +EG+ + GK P+HGC ++PY E K++ EILC K+++ Sbjct: 1 MSKVITQYGRAVEISVSWQEAHDGSIPLHAVKADGSCFVARAKHNGEYIPGKLVTGHSHVFVCYDGKEITKSHYQVLVDTSILPTTGYEWKWSEDLEIPPNAIIGGTDNGQPLFIVKSIVEGETVVGKFHPDHGCAHVPYEGLEFEKNEFEILCSLKKHL 160 The following BLAST results are available for this feature:
BLAST of DUF3421 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of DUF3421 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DUF3421 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of DUF3421 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30004057 ID=SMED30004057|Name=DUF3421 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=813bpback to top protein sequence of SMED30004057-orf-1 >SMED30004057-orf-1 ID=SMED30004057-orf-1|Name=SMED30004057-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=160bp MSQVKSSGGKGIEICLSWQNASNGHVPPNSVSAGDSYIARALHNGEYIPGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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