SMED30003829
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30003829 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 93Note: Hover over icons to view figure legend
Alignments
SMED30003829 aligns in the following genomic locations:
Homology
BLAST of SMED30003829 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 5.390e-10 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324
BLAST of SMED30003829 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 5.390e-10 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324
BLAST of SMED30003829 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 5.394e-10 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 357
BLAST of SMED30003829 vs. Ensembl Human
Match: ANK3 (ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]) HSP 1 Score: 56.225 bits (134), Expect = 1.604e-8 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 273 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 336
BLAST of SMED30003829 vs. Ensembl Human
Match: ANK3 (ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]) HSP 1 Score: 55.0694 bits (131), Expect = 4.733e-8 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 284 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 347
BLAST of SMED30003829 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 6.548e-6 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30003829 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 6.548e-6 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30003829 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 6.555e-6 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30003829 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 6.555e-6 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30003829 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 6.562e-6 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30003829 vs. Ensembl Fly
Match: Ank2 (gene:FBgn0261788 transcript:FBtr0303120) HSP 1 Score: 55.0694 bits (131), Expect = 2.033e-8 Identity = 21/64 (32.81%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + N+E +++ + P+H A+R+GH ++ +LL I K KNG +PL +A Q D ++L Sbjct: 410 KGGNIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAKTKNGLAPLHMAAQGEHVDAARIL 473
BLAST of SMED30003829 vs. Ensembl Fly
Match: Ank2 (gene:FBgn0261788 transcript:FBtr0334062) HSP 1 Score: 54.6842 bits (130), Expect = 2.264e-8 Identity = 21/64 (32.81%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + N+E +++ + P+H A+R+GH ++ +LL I K KNG +PL +A Q D ++L Sbjct: 260 KGGNIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAKTKNGLAPLHMAAQGEHVDAARIL 323
BLAST of SMED30003829 vs. Ensembl Fly
Match: Ank2 (gene:FBgn0261788 transcript:FBtr0303119) HSP 1 Score: 51.6026 bits (122), Expect = 2.880e-7 Identity = 21/61 (34.43%), Postives = 36/61 (59.02%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 N+E +++ + P+H A+R+GH ++ +LL I K KNG +PL +A Q D ++L Sbjct: 263 NIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAKTKNGLAPLHMAAQGEHVDAARIL 323
BLAST of SMED30003829 vs. Ensembl Fly
Match: Ank2 (gene:FBgn0261788 transcript:FBtr0334061) HSP 1 Score: 51.6026 bits (122), Expect = 2.926e-7 Identity = 21/61 (34.43%), Postives = 36/61 (59.02%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 N+E +++ + P+H A+R+GH ++ +LL I K KNG +PL +A Q D ++L Sbjct: 413 NIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAKTKNGLAPLHMAAQGEHVDAARIL 473
BLAST of SMED30003829 vs. Ensembl Fly
Match: Ank2 (gene:FBgn0261788 transcript:FBtr0303118) HSP 1 Score: 51.6026 bits (122), Expect = 3.089e-7 Identity = 21/61 (34.43%), Postives = 36/61 (59.02%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 N+E +++ + P+H A+R+GH ++ +LL I K KNG +PL +A Q D ++L Sbjct: 263 NIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAKTKNGLAPLHMAAQGEHVDAARIL 323
BLAST of SMED30003829 vs. Ensembl Zebrafish
Match: ank1a (ankyrin 1, erythrocytic a [Source:ZFIN;Acc:ZDB-GENE-041010-44]) HSP 1 Score: 58.9214 bits (141), Expect = 1.419e-9 Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL + I K KNG SP+ +A Q + DC++ L Sbjct: 261 RGAKIDAKTKDELTPLHCAARNGHVRIIEILLDQGAPIQAKTKNGLSPIHMAAQGDHLDCIRQL 324
BLAST of SMED30003829 vs. Ensembl Zebrafish
Match: ank3b (ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]) HSP 1 Score: 58.151 bits (139), Expect = 1.898e-9 Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNME 204 R ++ +K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL + E Sbjct: 261 RGARIDARTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLIHHE 328
BLAST of SMED30003829 vs. Ensembl Zebrafish
Match: ank3b (ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]) HSP 1 Score: 58.151 bits (139), Expect = 1.990e-9 Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNME 204 R ++ +K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL + E Sbjct: 289 RGARIDARTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLIHHE 356
BLAST of SMED30003829 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 4.362e-9 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 202 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 265
BLAST of SMED30003829 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 4.426e-9 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 294 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 357
BLAST of SMED30003829 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.6102 bits (135), Expect = 1.135e-8 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 219 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 282
BLAST of SMED30003829 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.6102 bits (135), Expect = 1.189e-8 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 257 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 320
BLAST of SMED30003829 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.6102 bits (135), Expect = 1.216e-8 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 247 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 310
BLAST of SMED30003829 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.6102 bits (135), Expect = 1.225e-8 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 357
BLAST of SMED30003829 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.6102 bits (135), Expect = 1.257e-8 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 357
BLAST of SMED30003829 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 62.003 bits (149), Expect = 1.425e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30003829 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 4.589e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30003829 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 4.897e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 357
BLAST of SMED30003829 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 4.924e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30003829 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 4.925e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30003829 vs. UniProt/SwissProt
Match: sp|P16157|ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3) HSP 1 Score: 60.8474 bits (146), Expect = 2.589e-9 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324
BLAST of SMED30003829 vs. UniProt/SwissProt
Match: sp|Q02357|ANK1_MOUSE (Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 3.447e-9 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 257 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 320
BLAST of SMED30003829 vs. UniProt/SwissProt
Match: sp|Q8C8R3|ANK2_MOUSE (Ankyrin-2 OS=Mus musculus OX=10090 GN=Ank2 PE=1 SV=2) HSP 1 Score: 55.4546 bits (132), Expect = 1.722e-7 Identity = 23/64 (35.94%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH +++LLL K + + KNG SPL +A Q + +CVK L Sbjct: 288 RGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHVECVKHL 351
BLAST of SMED30003829 vs. UniProt/SwissProt
Match: sp|O70511|ANK3_RAT (Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3) HSP 1 Score: 55.0694 bits (131), Expect = 2.288e-7 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 298 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 361
BLAST of SMED30003829 vs. UniProt/SwissProt
Match: sp|G5E8K5|ANK3_MOUSE (Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.369e-7 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 273 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLL 336
BLAST of SMED30003829 vs. TrEMBL
Match: A0A059LBQ3 (ANK_REP_REGION domain-containing protein (Fragment) OS=Helicosporidium sp. ATCC 50920 OX=1291522 GN=H632_c4503p0 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.864e-8 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 R C+ KSK+ P HYA+ +GH ++L+LL + + ++ G+SPL LA + DCV+ L N Sbjct: 7 RGAETSCQDKSKLTPAHYAAAHGHEEVLRLLWSKGTDLDAESPGGQSPLHLAAAAGQADCVRFLVN 72
BLAST of SMED30003829 vs. TrEMBL
Match: V8NF47 (Ankyrin-1 OS=Ophiophagus hannah OX=8665 GN=ANK1 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.834e-8 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R N+E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 218 RGANIEVRTKDELTPLHCAARNGHLRIAEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 281
BLAST of SMED30003829 vs. TrEMBL
Match: A0A1A8HDW4 (Ankyrin 1, erythrocytic (Fragment) OS=Nothobranchius korthausae OX=1143690 GN=ANK1 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.215e-7 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCV+ L Sbjct: 95 RGAQIDAKTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 158
BLAST of SMED30003829 vs. TrEMBL
Match: A0A2I0TYT3 (Ankyrin-1 isoform x9 OS=Limosa lapponica baueri OX=1758121 GN=llap_10773 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.357e-7 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIETRTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 357
BLAST of SMED30003829 vs. TrEMBL
Match: A0A4Z2J7F7 (Ankyrin-1 OS=Liparis tanakae OX=230148 GN=Ank1_0 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.497e-7 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A+RNGH+ I+++LL I K KNG SP+ +A Q + DCVK L Sbjct: 212 RGAQIDAVTKDELTPLHCAARNGHARIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVKQL 275
BLAST of SMED30003829 vs. Ensembl Cavefish
Match: ank1a (ankyrin 1, erythrocytic a [Source:ZFIN;Acc:ZDB-GENE-041010-44]) HSP 1 Score: 58.9214 bits (141), Expect = 1.246e-9 Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL + I K KNG SP+ +A Q + DCV+ L Sbjct: 233 RGATIDAKTKDELTPLHCAARNGHVRIIEILLDQGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 296
BLAST of SMED30003829 vs. Ensembl Cavefish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 58.151 bits (139), Expect = 2.421e-9 Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A+RNGH ++++LL + I K KNG SP+ +A Q + DCV+ L Sbjct: 236 RGAQIDARTKDELTPLHCAARNGHVRVIEILLDQGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 299
BLAST of SMED30003829 vs. Ensembl Cavefish
Match: ank3b (ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]) HSP 1 Score: 56.225 bits (134), Expect = 1.059e-8 Identity = 24/68 (35.29%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNME 204 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL + E Sbjct: 237 RGARIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLLHHE 304
BLAST of SMED30003829 vs. Ensembl Cavefish
Match: ank3a (ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]) HSP 1 Score: 55.4546 bits (132), Expect = 1.907e-8 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 292 RGAKIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 355
BLAST of SMED30003829 vs. Ensembl Cavefish
Match: ank3a (ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]) HSP 1 Score: 55.0694 bits (131), Expect = 2.203e-8 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 264 RGAKIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 327
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000095.1 (pep scaffold:Pmarinus_7.0:GL477582:20897:60453:1 gene:ENSPMAG00000000080.1 transcript:ENSPMAT00000000095.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.4546 bits (132), Expect = 3.196e-9 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++++LL I K KNG SPL +A Q CV+LL Sbjct: 260 RGAKIDTKTRDGLTPLHCAARSGHEKVIEMLLERDAPILAKTKNGLSPLHMATQGEHLACVQLL 323
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000093.1 (pep scaffold:Pmarinus_7.0:GL477582:20502:66045:1 gene:ENSPMAG00000000080.1 transcript:ENSPMAT00000000093.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.4546 bits (132), Expect = 3.240e-9 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++++LL I K KNG SPL +A Q CV+LL Sbjct: 267 RGAKIDTKTRDGLTPLHCAARSGHEKVIEMLLERDAPILAKTKNGLSPLHMATQGEHLACVQLL 330
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007446.1 (pep scaffold:Pmarinus_7.0:GL478728:200023:240674:1 gene:ENSPMAG00000006704.1 transcript:ENSPMAT00000007446.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.6026 bits (122), Expect = 6.810e-8 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 37 MRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + P+H A+R+GH ++++LL + I K KNG SPL +A Q + +CV++L Sbjct: 7 LTPLHCAARSGHEQVVEILLEQGAPILAKTKNGLSPLHMATQGDHVECVQVL 58
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003991.1 (pep scaffold:Pmarinus_7.0:GL484476:255315:281660:1 gene:ENSPMAG00000003623.1 transcript:ENSPMAT00000003991.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 47.7506 bits (112), Expect = 1.280e-6 Identity = 22/67 (32.84%), Postives = 37/67 (55.22%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNM 201 + N+ K R IH+A+ GH++++K+L+ + CK+K G SPL A + VKLL ++ Sbjct: 160 KGANINAFDKKDRRAIHWAAYMGHTEVVKVLVAHGADVRCKDKKGYSPLHAASSSGQIGVVKLLLDL 226
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Match: asap2a (ArfGAP with SH3 domain, ankyrin repeat and PH domain 2a [Source:ZFIN;Acc:ZDB-GENE-041210-256]) HSP 1 Score: 47.7506 bits (112), Expect = 1.311e-6 Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEK 207 RN N + E+ + +H+ SR ++ LKLLLR K ++ N+ G++ LD+AKQ + C LLT EK Sbjct: 548 RNVNKQTENGNTA--LHFCSRYNATECLKLLLRSKAALHVSNEAGETALDIAKQMDHAQCEDLLTLAEK 614
BLAST of SMED30003829 vs. Ensembl Nematostella
Match: EDO38657 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCC3]) HSP 1 Score: 45.8246 bits (107), Expect = 7.982e-7 Identity = 22/61 (36.07%), Postives = 34/61 (55.74%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 N++ +S S + +HYA+ G + L+LL+ + RI + G SPLD A + FDC L Sbjct: 20 NIDHQSASGLTALHYAALEGSFECLELLVNKGARIDILDSKGCSPLDFAVRGGNFDCAAYL 80
BLAST of SMED30003829 vs. Ensembl Medaka
Match: ank1b (ankyrin-1 [Source:NCBI gene;Acc:101157380]) HSP 1 Score: 59.6918 bits (143), Expect = 8.249e-10 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCV+ L Sbjct: 259 RGAQIDAQTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 322
BLAST of SMED30003829 vs. Ensembl Medaka
Match: ENSORLT00000039903.1 (pep primary_assembly:ASM223467v1:15:18469388:18484014:-1 gene:ENSORLG00000030042.1 transcript:ENSORLT00000039903.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 58.151 bits (139), Expect = 1.650e-9 Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 266 RGARIEAKTKDGLTPLHCGARSGHEQVVEILLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 329
BLAST of SMED30003829 vs. Ensembl Medaka
Match: ENSORLT00000040233.1 (pep primary_assembly:ASM223467v1:19:16412534:16434057:1 gene:ENSORLG00000021910.1 transcript:ENSORLT00000040233.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 58.151 bits (139), Expect = 1.883e-9 Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 266 RGSKIDARTKDGLTPLHCAARSGHEQVVEMLLNRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 329
BLAST of SMED30003829 vs. Ensembl Medaka
Match: ENSORLT00000006308.2 (pep primary_assembly:ASM223467v1:1:12516834:12530692:1 gene:ENSORLG00000005003.2 transcript:ENSORLT00000006308.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.225 bits (134), Expect = 6.860e-9 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++LLL I + KNG SPL ++ Q + +CVKLL Sbjct: 236 RGAQIDAKTRDGLTPLHCAARSGHDPAVELLLERGAPILARTKNGLSPLHMSAQGDHIECVKLL 299
BLAST of SMED30003829 vs. Ensembl Medaka
Match: ank1a (ankyrin-1 [Source:NCBI gene;Acc:101174837]) HSP 1 Score: 53.5286 bits (127), Expect = 9.033e-8 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 1 Query: 25 SKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCVK L Sbjct: 207 ANDELTPLHCAARNGHFRIIEILLDNGAPIQAKTKNGLSPIHMAAQGDHMDCVKQL 262
BLAST of SMED30003829 vs. Planmine SMEST
Match: SMESG000010321.1 (SMESG000010321.1) HSP 1 Score: 233.032 bits (593), Expect = 9.604e-87 Identity = 137/158 (86.71%), Postives = 141/158 (89.24%), Query Frame = 3 Query: 249 KLFAIIERDDPIEIEKLFISCEFIRENICVNLSGFDWFLIEI*TGLNVLEMAMTSNADKIIKWXXXXXXXXXXXXXXXXXLTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLEVAVEHGCDLLIDLIMRKTIYDKSSIWI 722 KLFAIIERDDPIEIEKL+ISCEFIRENI TGLNVLE+AMTSNADKIIKWILDKSI+ KEIDEVIKELTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLE+AVEHGCDLLIDLIMRKTIYDK SIWI Sbjct: 160 KLFAIIERDDPIEIEKLYISCEFIRENIY--------------TGLNVLEIAMTSNADKIIKWILDKSIEKKEIDEVIKELTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLELAVEHGCDLLIDLIMRKTIYDK-SIWI 302 HSP 2 Score: 106.301 bits (264), Expect = 9.604e-87 Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKV 210 RNC +ECE+KS MRPIH AS G S+I+KL LR KCRI CKNK+GKSPLD+AK NR DCVKLLTNMEK+ Sbjct: 92 RNCTIECETKSGMRPIHCASWKGDSEIVKLFLRRKCRIDCKNKDGKSPLDIAKDNNRVDCVKLLTNMEKL 161
BLAST of SMED30003829 vs. Planmine SMEST
Match: SMESG000019970.1 (SMESG000019970.1) HSP 1 Score: 221.09 bits (562), Expect = 1.662e-86 Identity = 134/158 (84.81%), Postives = 138/158 (87.34%), Query Frame = 3 Query: 249 KLFAIIERDDPIEIEKLFISCEFIRENICVNLSGFDWFLIEI*TGLNVLEMAMTSNADKIIKWXXXXXXXXXXXXXXXXXLTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLEVAVEHGCDLLIDLIMRKTIYDKSSIWI 722 KLFAIIERD PIEIEKLFISCEFIRENI TGLNVLEMAMTSNADKIIKWILDKSID KEIDEVIKELTAKDKENANLLKE +LYLCITRHHMRGFKRFHSAEVING RRIVGPT+LE+AVE+GCDLLIDLIMRKTIYDK SIWI Sbjct: 127 KLFAIIERDAPIEIEKLFISCEFIRENIY--------------TGLNVLEMAMTSNADKIIKWILDKSIDNKEIDEVIKELTAKDKENANLLKERLLYLCITRHHMRGFKRFHSAEVINGHRRIVGPTYLELAVENGCDLLIDLIMRKTIYDK-SIWI 269 HSP 2 Score: 117.087 bits (292), Expect = 1.662e-86 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKV 210 RNCN ECESKSK RPIHYASR GHS+I+KL L+ K RI CKNK+GKSPLD+AKQ NR DCVKLLTNMEK+ Sbjct: 59 RNCNTECESKSKWRPIHYASREGHSEIVKLFLQRKWRIDCKNKDGKSPLDIAKQFNRVDCVKLLTNMEKL 128
BLAST of SMED30003829 vs. Planmine SMEST
Match: SMESG000019776.1 (SMESG000019776.1) HSP 1 Score: 228.794 bits (582), Expect = 4.769e-86 Identity = 136/158 (86.08%), Postives = 140/158 (88.61%), Query Frame = 3 Query: 249 KLFAIIERDDPIEIEKLFISCEFIRENICVNLSGFDWFLIEI*TGLNVLEMAMTSNADKIIKWXXXXXXXXXXXXXXXXXLTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLEVAVEHGCDLLIDLIMRKTIYDKSSIWI 722 KLF+IIERDDPIEIEKLFI C+FIRENI TGLNVLEMAMTSNADKIIKWILDKSID KEIDEVIKELTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLE+AVEHGCDLLIDLIMRKTIY+K SIWI Sbjct: 189 KLFSIIERDDPIEIEKLFICCQFIRENIY--------------TGLNVLEMAMTSNADKIIKWILDKSIDNKEIDEVIKELTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLELAVEHGCDLLIDLIMRKTIYNK-SIWI 331 HSP 2 Score: 108.227 bits (269), Expect = 4.769e-86 Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKV 210 RNCN ECE+K RPIH+A+ GHS+I+KLLLR KCRI CKNK+GKSPLD+AK+ N FDCV+LLTNMEK+ Sbjct: 121 RNCNTECETKLGERPIHHATWRGHSEIVKLLLRRKCRIDCKNKDGKSPLDIAKEYNHFDCVELLTNMEKL 190 HSP 3 Score: 72.0182 bits (175), Expect = 3.921e-14 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN ECE +S RPIH+AS NGHS+I+KLLL C CK+K+G+ P+ A + + VKLL Sbjct: 22 RNCNTECEDESGRRPIHWASSNGHSEIVKLLLDRNCNTECKDKSGERPIHYASRDGNSEIVKLL 85 HSP 4 Score: 64.6994 bits (156), Expect = 9.496e-12 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN EC+ KS RPIHYASR+G+S+I+KLLL C CK+K+ P+ A + VKLL Sbjct: 55 RNCNTECKDKSGERPIHYASRDGNSEIVKLLLDRNCNTECKDKSKWRPIHHASSNGNSEIVKLL 118
BLAST of SMED30003829 vs. Planmine SMEST
Match: SMESG000019959.1 (SMESG000019959.1) HSP 1 Score: 223.402 bits (568), Expect = 3.470e-85 Identity = 135/158 (85.44%), Postives = 139/158 (87.97%), Query Frame = 3 Query: 249 KLFAIIERDDPIEIEKLFISCEFIRENICVNLSGFDWFLIEI*TGLNVLEMAMTSNADKIIKWXXXXXXXXXXXXXXXXXLTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLEVAVEHGCDLLIDLIMRKTIYDKSSIWI 722 KLFAIIERDDPIEIEKLFISCEFIRENI TGLNVLEMAMTSNADKIIKWILDKSID KEIDEVIKELTAKDKENANLLKE +LYLCITRHHMRGFKRFHSAEVINGQRR VGPTFLE+AVE+GCDLLIDLI+RKTIYDK SIWI Sbjct: 226 KLFAIIERDDPIEIEKLFISCEFIRENIY--------------TGLNVLEMAMTSNADKIIKWILDKSIDNKEIDEVIKELTAKDKENANLLKERLLYLCITRHHMRGFKRFHSAEVINGQRRTVGPTFLELAVENGCDLLIDLILRKTIYDK-SIWI 368 HSP 2 Score: 110.538 bits (275), Expect = 3.470e-85 Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKV 210 RNCN ECE++S RPIHYASR GHS+I+KL L+ KCRI CKNK+GKSPLD AK+ NR DC+KLLTNMEK+ Sbjct: 158 RNCNTECENESGNRPIHYASREGHSEIVKLFLQRKCRIDCKNKDGKSPLDFAKEYNRVDCMKLLTNMEKL 227 HSP 3 Score: 68.1662 bits (165), Expect = 6.689e-13 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN CE+KS RPIHYAS GHS+I+KLLL C C+N++G P+ A + VKLL Sbjct: 59 RNCNTICETKSGDRPIHYASWQGHSEIVKLLLDRNCNTECENESGNRPIHYASWQGHSEIVKLL 122
BLAST of SMED30003829 vs. Planmine SMEST
Match: SMESG000010347.1 (SMESG000010347.1) HSP 1 Score: 223.402 bits (568), Expect = 2.687e-84 Identity = 135/158 (85.44%), Postives = 139/158 (87.97%), Query Frame = 3 Query: 249 KLFAIIERDDPIEIEKLFISCEFIRENICVNLSGFDWFLIEI*TGLNVLEMAMTSNADKIIKWXXXXXXXXXXXXXXXXXLTAKDKENANLLKECILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTFLEVAVEHGCDLLIDLIMRKTIYDKSSIWI 722 KLFAIIERDDPIEIEKLFISCEFIRENI TGLNVLEMAMTSNADKIIKWILDKSID KEIDE+IKELTAKDKEN NLLKE ILYLCITRHHMRGFKRFHSAEVINGQRRIVGPT+LE+AVEHGCDLLIDLIMRKTIY+K SIWI Sbjct: 160 KLFAIIERDDPIEIEKLFISCEFIRENIY--------------TGLNVLEMAMTSNADKIIKWILDKSIDNKEIDEIIKELTAKDKENGNLLKERILYLCITRHHMRGFKRFHSAEVINGQRRIVGPTYLELAVEHGCDLLIDLIMRKTIYNK-SIWI 302 HSP 2 Score: 107.457 bits (267), Expect = 2.687e-84 Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKV 210 RNCN+ECE KSK RPIH AS NGHS+ LKLLL+ KCRI KNK+GKSPLD+AKQ NR DCV+LLT+MEK+ Sbjct: 92 RNCNIECEDKSKWRPIHCASWNGHSETLKLLLQWKCRIDYKNKDGKSPLDIAKQYNRVDCVELLTHMEKL 161 The following BLAST results are available for this feature:
BLAST of SMED30003829 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30003829 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30003829 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SMED30003829 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30003829 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of SMED30003829 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30003829 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30003829 ID=SMED30003829|Name=SMED30003829|organism=Schmidtea mediterranea sexual|type=transcript|length=738bpback to top protein sequence of SMED30003829-orf-1 >SMED30003829-orf-1 ID=SMED30003829-orf-1|Name=SMED30003829-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=113bp MAMTSNADKIIKWILDKSIDIKEIDEVIKELTAKDKENANLLKECILYLCback to top Annotated Terms
The following terms have been associated with this transcript:
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