GM18668

Overview
NameGM18668
Smed IDSMED30003816
Length (bp)1037
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of GM18668 (SMED30003816) t-SNE clustered cells

Violin plots show distribution of expression levels for GM18668 (SMED30003816) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of GM18668 (SMED30003816) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for GM18668 (SMED30003816) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30003816

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30003816SMESG000032629.1 dd_Smed_v4_2860_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30003816SMESG000032629.1 dd_Smed_v4_2860_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30003816SMESG000032629.1 dd_Smed_v4_2860_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30003816SMESG000032629.1 dd_Smed_v4_2860_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of GM18668 vs. Ensembl Human
Match: NIF3L1 (NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390])

HSP 1 Score: 122.479 bits (306), Expect = 2.726e-33
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:  168 QLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKI 584
            + +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM E + K   +I+SYHPPIF P+K I  + WKE L+ + ++  + +YSPHTA D+   G+N+W+          PI  +K  N   +G  ++
Sbjct:    4 KALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRV 142
[Close]
BLAST of GM18668 vs. Ensembl Human
Match: NIF3L1 (NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390])

HSP 1 Score: 122.865 bits (307), Expect = 7.043e-33
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:  168 QLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKI 584
            + +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM E + K   +I+SYHPPIF P+K I  + WKE L+ + ++  + +YSPHTA D+   G+N+W+          PI  +K  N   +G  ++
Sbjct:    4 KALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRV 142
[Close]
BLAST of GM18668 vs. Ensembl Human
Match: NIF3L1 (NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390])

HSP 1 Score: 120.939 bits (302), Expect = 9.671e-33
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 3 
Query:  168 QLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLN 557
            + +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM E + K   +I+SYHPPIF P+K I  + WKE L+ + ++  + +YSPHTA D+   G+N+W+          PI  +K  N
Sbjct:   31 KALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPN 160
[Close]
BLAST of GM18668 vs. Ensembl Human
Match: NIF3L1 (NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390])

HSP 1 Score: 123.25 bits (308), Expect = 1.291e-32
Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKI 584
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM E + K   +I+SYHPPIF P+K I  + WKE L+ + ++  + +YSPHTA D+   G+N+W+          PI  +K  N   +G  ++
Sbjct:   33 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRV 169
[Close]
BLAST of GM18668 vs. Ensembl Human
Match: NIF3L1 (NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390])

HSP 1 Score: 123.635 bits (309), Expect = 2.600e-32
Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKI 584
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM E + K   +I+SYHPPIF P+K I  + WKE L+ + ++  + +YSPHTA D+   G+N+W+          PI  +K  N   +G  ++
Sbjct:   33 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRV 169
[Close]
BLAST of GM18668 vs. Ensembl Fly
Match: CG4278 (gene:FBgn0014092 transcript:FBtr0080834)

HSP 1 Score: 222.246 bits (565), Expect = 1.819e-70
Identity = 127/279 (45.52%), Postives = 167/279 (59.86%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLK-DLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            + K+LE FAP   AE WDNVG+L+EP  E  I KIL+TNDLT  V+ EA+ K  ++IISYHPPIF P+  I QS+WKE ++  C+  DI +YSPHTA D  +GG+NDW+    NI    P+E        P+ G     GSGRY E K  + LS  +E L++R      + LA  H    +    I ++ +C GSG SL K +Q  ADL +TGEMSHHE+L+ T N     + +L   HSNSERGFL + + P L K L N    V +S+ D DPL+ V
Sbjct:   16 VVKELENFAPTSWAEKWDNVGLLIEPHREKQIKKILLTNDLTEPVVKEALEKEAELIISYHPPIFKPLTRITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAVNIISIRPLE--------PELGAPPGTGSGRYIETK--MELSQVVESLQKRIRNSVHVALAVGHTPKTL----IQSVGICAGSGASLLKGIQ--ADLIITGEMSHHEVLEFTHN----NTTVLLCNHSNSERGFLHE-FCPILAKSL-NEECLVFVSEVDKDPLVTV 272
[Close]
BLAST of GM18668 vs. Ensembl Zebrafish
Match: nif3l1 (NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80])

HSP 1 Score: 133.265 bits (334), Expect = 1.449e-35
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFN 515
            + + LE+ APL LAESWDNVG+LVEP     I  IL+TNDLT  VM+EA+     +I+SYHPP+F P K + Q  WK+ L  + I+  I ++SPHT+ DSV GG+NDW++    
Sbjct:    6 VLEVLEQLAPLSLAESWDNVGLLVEPSRPRPIKTILLTNDLTAAVMDEAVGMKCDLIVSYHPPLFRPFKRLLQKDWKQRLAVRAIENGIGIFSPHTSWDSVEGGVNDWLVGGMG 119

HSP 2 Score: 98.2117 bits (243), Expect = 1.018e-22
Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLA-KSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR   L+ P+S+S A++ +K    L  L LA    + LD     + T+AVC GSG S+ + +   ADL++TGEMSHHE+LDA   V   TSVIL+  HSNSERGFL  V++  L   L ++ V ++IS +D DPL VV
Sbjct:  219 GQGRLSVLEEPVSVSTAVQKMKTHLGLPHLRLALGDQQTLDSM---VKTVAVCAGSGASVIQGVT--ADLYITGEMSHHEVLDA---VSKGTSVILSE-HSNSERGFL-GVFRERLSARL-DHTVSIVISQTDRDPLQVV 347
[Close]
BLAST of GM18668 vs. Ensembl Zebrafish
Match: nif3l1 (NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80])

HSP 1 Score: 84.3445 bits (207), Expect = 1.713e-18
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLA-KSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKEL 947
            G GR   L+ P+S+S A++ +K    L  L LA    + LD     + T+AVC GSG S+ + +   ADL++TGEMSHHE+LDA   V   TSVIL+  HSNSERGFL  V++  L   L
Sbjct:  131 GQGRLSVLEEPVSVSTAVQKMKTHLGLPHLRLALGDQQTLDSM---VKTVAVCAGSGASVIQGV--TADLYITGEMSHHEVLDA---VSKGTSVILSE-HSNSERGFL-GVFRERLSARL 240
[Close]
BLAST of GM18668 vs. Ensembl Xenopus
Match: nif3l1 (NGG1 interacting factor 3 like 1 [Source:NCBI gene;Acc:549109])

HSP 1 Score: 126.331 bits (316), Expect = 1.100e-32
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLN 557
            +  +L    P  LAE WDNVG+LVEP     + K+L+TNDLT  V++EAI     MI+SYHPP+F  +K I Q  WKE L+ K +++ + VYSPHT+ D++  G+NDW+          P+  + +L 
Sbjct:   31 VVSRLNVLTPPALAEGWDNVGLLVEPSPPHQVHKLLLTNDLTEDVLDEAIDTGANMILSYHPPVFKALKRITQKSWKERLVVKALEKHLAVYSPHTSCDALANGVNDWLARALGPSKSVPLRASTSLT 158

HSP 2 Score: 87.8113 bits (216), Expect = 8.128e-19
Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L  P+S++ A+E +K+   L  L LA         E S++  AVC GSG S+   +   A+L++TGEMSHH++LDA   V    SV+L   HSNSERG+L ++    +++ L+   V+V++S  D DPL VV
Sbjct:  244 GMGRLCTLSEPVSIAAALERIKKHLHLPHLRLALGRGR--TLESSVSMAAVCAGSGSSILSGVP--AELYLTGEMSHHDVLDA---VAEGRSVVLCE-HSNSERGYLQELGG-QIRQALEG-QVQVVVSQRDRDPLQVV 372
[Close]
BLAST of GM18668 vs. Ensembl Xenopus
Match: pltp (phospholipid transfer protein [Source:Xenbase;Acc:XB-GENE-981861])

HSP 1 Score: 123.635 bits (309), Expect = 1.184e-31
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLN 557
            +   L    P  LAE WDNVG+LVEP     + K+L+TNDLT  V++EAI     MI+SYHPP+F  +K I Q  WKE L+ K +++ + VYSPHT+ D++  G+NDW+          P+  + +L 
Sbjct:   31 VVSCLNVLTPPALAEGWDNVGLLVEPSPPHQVHKLLLTNDLTEDVLDEAIDTGANMILSYHPPVFKALKRITQKSWKERLVVKALEKRLAVYSPHTSCDALANGVNDWLARALGPSKSVPLRASTSLT 158
[Close]
BLAST of GM18668 vs. Ensembl Xenopus
Match: pltp (phospholipid transfer protein [Source:Xenbase;Acc:XB-GENE-981861])

HSP 1 Score: 120.939 bits (302), Expect = 6.979e-31
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWI 500
            +   L    P  LAE WDNVG+LVEP     + K+L+TNDLT  V++EAI     MI+SYHPP+F  +K I Q  WKE L+ K +++ + VYSPHT+ D++  G+NDW+
Sbjct:   31 VVSCLNVLTPPALAEGWDNVGLLVEPSPPHQVHKLLLTNDLTEDVLDEAIDTGANMILSYHPPVFKALKRITQKSWKERLVVKALEKRLAVYSPHTSCDALANGVNDWL 139
[Close]
BLAST of GM18668 vs. Ensembl Mouse
Match: Nif3l1 (Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485])

HSP 1 Score: 128.642 bits (322), Expect = 5.639e-34
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPD 569
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+   G+N W+          PI  ++    APD
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSR----APD 159
[Close]
BLAST of GM18668 vs. Ensembl Mouse
Match: Nif3l1 (Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485])

HSP 1 Score: 123.635 bits (309), Expect = 5.976e-34
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWI 500
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+   G+N W+
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWL 140
[Close]
BLAST of GM18668 vs. Ensembl Mouse
Match: Nif3l1 (Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485])

HSP 1 Score: 127.872 bits (320), Expect = 2.531e-33
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPIS 629
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+   G+N W+          PI  ++  +   +G  ++     R  +L   +S
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSRAPDYPTEGAHRLEFSVNRSQDLDKVMS 183

HSP 2 Score: 85.5001 bits (210), Expect = 4.310e-18
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVN---ELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L   +SL+I IE +K    L  L LA     L V    E  +  +A+C GSG S+ + ++  ADL++TGEMSHH++LDA        +VIL   HSN+ERGFL ++ Q  L    +N  + +I+S++D DPL VV
Sbjct:  248 GMGRLCTLDESVSLAIMIERIKTHLKLSHLRLA-----LGVGRTLESQVKVVALCAGSGGSVLQGVE--ADLYLTGEMSHHDVLDAASK---GINVILCE-HSNTERGFLSEL-QEMLGVHFEN-KINIILSETDRDPLRVV 376
[Close]
BLAST of GM18668 vs. Ensembl Mouse
Match: Nif3l1 (Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485])

HSP 1 Score: 127.872 bits (320), Expect = 2.531e-33
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPIS 629
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+   G+N W+          PI  ++  +   +G  ++     R  +L   +S
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSRAPDYPTEGAHRLEFSVNRSQDLDKVMS 183

HSP 2 Score: 85.5001 bits (210), Expect = 4.310e-18
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVN---ELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L   +SL+I IE +K    L  L LA     L V    E  +  +A+C GSG S+ + ++  ADL++TGEMSHH++LDA        +VIL   HSN+ERGFL ++ Q  L    +N  + +I+S++D DPL VV
Sbjct:  248 GMGRLCTLDESVSLAIMIERIKTHLKLSHLRLA-----LGVGRTLESQVKVVALCAGSGGSVLQGVE--ADLYLTGEMSHHDVLDAASK---GINVILCE-HSNTERGFLSEL-QEMLGVHFEN-KINIILSETDRDPLRVV 376
[Close]
BLAST of GM18668 vs. Ensembl Mouse
Match: Nif3l1 (Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485])

HSP 1 Score: 113.62 bits (283), Expect = 1.594e-30
Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDS 473
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDA 131
[Close]
BLAST of GM18668 vs. UniProt/SwissProt
Match: sp|Q9NK57|NIF3L_DROME (NIF3-like protein 1 OS=Drosophila melanogaster OX=7227 GN=anon-35F/36A PE=1 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 1.824e-69
Identity = 127/279 (45.52%), Postives = 167/279 (59.86%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLK-DLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            + K+LE FAP   AE WDNVG+L+EP  E  I KIL+TNDLT  V+ EA+ K  ++IISYHPPIF P+  I QS+WKE ++  C+  DI +YSPHTA D  +GG+NDW+    NI    P+E        P+ G     GSGRY E K  + LS  +E L++R      + LA  H    +    I ++ +C GSG SL K +Q  ADL +TGEMSHHE+L+ T N     + +L   HSNSERGFL + + P L K L N    V +S+ D DPL+ V
Sbjct:   16 VVKELENFAPTSWAEKWDNVGLLIEPHREKQIKKILLTNDLTEPVVKEALEKEAELIISYHPPIFKPLTRITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAVNIISIRPLE--------PELGAPPGTGSGRYIETK--MELSQVVESLQKRIRNSVHVALAVGHTPKTL----IQSVGICAGSGASLLKGIQ--ADLIITGEMSHHEVLEFTHN----NTTVLLCNHSNSERGFLHE-FCPILAKSL-NEECLVFVSEVDKDPLVTV 272
[Close]
BLAST of GM18668 vs. UniProt/SwissProt
Match: sp|P53081|NIF3_YEAST (NGG1-interacting factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NIF3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.148e-44
Identity = 101/286 (35.31%), Postives = 151/286 (52.80%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAE-SWDNVGILVEPENE----VDI---SKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIR-QSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIV 1004
            + + + +F P   A+ SWDN G+L++         D    +K+L+T DLT  V  EA+  N  +I++YHP IF     +   +  +     K I+  I VY PHTA+D+  GG+NDW++   N    E +  +  L       D +I G GR+ E    ISL   ++ +KR   +  + +A        N+L I  +AVC GSG  +FK L++  DL+ TGEMSHHE+L   E  +T    ++   HSN+ERGFL DV    +K  L++   EV++S  D DPL V
Sbjct:   13 LVRSITKFYPQKYADKSWDNTGLLIDCSTAQVTTADANAKTKVLLTVDLTKSVAQEAVDANCNVIVAYHPFIFPSWNRLSPHTNPQHETAIKLIQYGISVYCPHTAVDAARGGVNDWLVRGLN--NGENVAKSYALETVSGETDDLI-GYGRFVEFNKDISLEQIVKNVKRVLRVPYVQVASLAAPSAWNQLKIKKVAVCAGSGSGVFKQLKEDVDLYYTGEMSHHEVLKWKEMGKT----VIVCNHSNTERGFLQDV----MKGLLQDEGHEVVVSKMDCDPLTV 287
[Close]
BLAST of GM18668 vs. UniProt/SwissProt
Match: sp|O94404|NIF3_SCHPO (Protein NIF3 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC126.12 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.396e-42
Identity = 109/293 (37.20%), Postives = 158/293 (53.92%), Query Frame = 3 
Query:  153 KYSINQLIFKKLEEFAPLVLAESWDNVGILVE-PENEVDISKILITNDLTHRVMNEAIS-KNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEF-----NIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAK--SHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVE--VIISDSDSDPL 998
            K +I+  + K +E      LA+SWDN G+L+E P    + S +L+T DLT +V  EAIS K V  I++YHP IF  +K I     ++  + K     I+VYSPHTA+D+   G+NDW+         NI+   P + N  +  A         G GR CELK P +L    E+++R   L  L   +  +   LD +   I+ +++C GSG S+  ++   ADL+ TGE+SHH++L A   +    SVIL  GHSN+ERG+L DV    L        V+  VI+S  D+DPL
Sbjct:    3 KANISSKLKKVVESIYNPKLADSWDNTGLLLEAPFPRTNASSVLLTIDLTEKVAEEAISNKLVSSIVAYHPIIFRGLKAITMEDPQQRSLLKLAAEGIHVYSPHTAVDAAVDGVNDWLAQGIAGGRNNIKSVVPTQQNSVMAEA--------EGYGRICELKIPTTLR---ELVQRAKELTGLQYVQVCAPNGLDSH---ISKVSLCAGSGGSV--VMNTDADLYFTGELSHHQVLAA---MAKGISVIL-CGHSNTERGYLKDVMCQKLASSFHKEGVDANVIVSSMDADPL 275
[Close]
BLAST of GM18668 vs. UniProt/SwissProt
Match: sp|Q4V7D6|NIF3L_RAT (NIF3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Nif3l1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.669e-33
Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKI 584
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM EA+ K   +I+SYHPPIF P+KHI    WKE L+ + ++  + +YSPHTA D+   G+N W+          PI  +K  N   +G  ++
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEALQKKADLILSYHPPIFRPMKHITWKTWKERLVIRALENRVAIYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSKAPNYPTEGTHRL 168

HSP 2 Score: 88.9669 bits (219), Expect = 1.970e-18
Identity = 61/142 (42.96%), Postives = 84/142 (59.15%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVN---ELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L   +SL+  IE +KR   L  L LA     L V    E  +  +A+C GSG S+ + ++  ADL++TGEMSHH++LDA        +VIL   HSN+ERGFL D+ Q  L   L+N  + +I+S++D DPL VV
Sbjct:  248 GMGRLCTLDESVSLATMIERIKRHLKLPHLRLA-----LGVGRTLESPVKVVALCAGSGGSVLQGVE--ADLYLTGEMSHHDVLDAASK---GINVILCE-HSNTERGFLSDL-QEMLGVHLEN-KINIILSETDRDPLRVV 376
[Close]
BLAST of GM18668 vs. UniProt/SwissProt
Match: sp|Q9EQ80|NIF3L_MOUSE (NIF3-like protein 1 OS=Mus musculus OX=10090 GN=Nif3l1 PE=1 SV=4)

HSP 1 Score: 127.872 bits (320), Expect = 1.771e-32
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPIS 629
            +   L +FA L  AESWDNVG+LVEP     ++ + +TNDLT  VM+EA+ K    I+SYHPPIF P+KHI    WKE L+ + ++  + VYSPHTA D+   G+N W+          PI  ++  +   +G  ++     R  +L   +S
Sbjct:   32 LLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMDEALQKKADFILSYHPPIFRPMKHITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSRAPDYPTEGAHRLEFSVNRSQDLDKVMS 183

HSP 2 Score: 85.5001 bits (210), Expect = 3.015e-17
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVN---ELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L   +SL+I IE +K    L  L LA     L V    E  +  +A+C GSG S+ + ++  ADL++TGEMSHH++LDA        +VIL   HSN+ERGFL ++ Q  L    +N  + +I+S++D DPL VV
Sbjct:  248 GMGRLCTLDESVSLAIMIERIKTHLKLSHLRLA-----LGVGRTLESQVKVVALCAGSGGSVLQGVE--ADLYLTGEMSHHDVLDAASK---GINVILCE-HSNTERGFLSEL-QEMLGVHFEN-KINIILSETDRDPLRVV 376
[Close]
BLAST of GM18668 vs. TrEMBL
Match: A0A182FK90 (Uncharacterized protein OS=Anopheles albimanus OX=7167 PE=4 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.445e-71
Identity = 128/279 (45.88%), Postives = 183/279 (65.59%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDAT-ENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY-NVEVIISDSDSDPLIV 1004
            +  KL EFAP  L E WDNVG+L+EP     +S IL+T DLT  VM+EA+S N + IISYHPPIF P+K I Q  WKE ++T C++  I VYSPHT  D+V  G+NDW+ +   +   +PI+ N + NP+        +GSGR C ++  ++L  AIE++K+   +K L +A+SH  L +N+  I T AVC GSG S+ K +  +ADL++TGEMSHHE+LDAT +N+      ++  GHSNSERG+L  V+Q  L   L++Y +V + +S+ D+DP+ V
Sbjct:   38 VVAKLNEFAPESLCEKWDNVGLLIEPYMRRVVSNILLTIDLTEMVMSEAVSLNAEFIISYHPPIFAPLKRITQKSWKERIVTLCLQEGIAVYSPHTCWDNVTNGVNDWLAAALPLASAQPIQENLS-NPS--------YGSGRICVVQGELTLDRAIELIKKYTQVKTLQVARSHSAL-MNDTPIRTFAVCAGSGGSVLKGV--KADLYITGEMSHHEILDATHQNIH-----VVLLGHSNSERGYL-PVFQKILANMLQDYSDVNIHVSNFDADPIKV 298
[Close]
BLAST of GM18668 vs. TrEMBL
Match: A0A2M4AT12 (Putative conserved secreted protein OS=Anopheles triannulatus OX=58253 PE=4 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 4.208e-71
Identity = 134/313 (42.81%), Postives = 196/313 (62.62%), Query Frame = 3 
Query:  102 SSLVNRKFISHSILMALK---YSINQL-------IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDAT-ENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY-NVEVIISDSDSDPLIV 1004
            +S V  KF S  + + L    +S +++       +  KL EFAP  L E WDNVG+L+EP     +S +L+T DLT  VM+EA+S N + IISYHPPIF P+K I Q  WKE ++T C++  I VYSPHT  D+V  G+NDW+ +   +   +PI+ N + NP+        +GSGR C ++  ++L  AIE +K+   +K L +A+SH  L +N+  I T AVC GSG S+ K +  +ADL++TGEMSHHE+LDAT +N+      ++  GHSNSERG+L  V+Q  L   L++Y +V + +S+ D+DP+ V
Sbjct:    5 TSAVALKFASRGLALTLSRKYFSSHKMPQIMVDGVVAKLNEFAPESLCEKWDNVGLLIEPYMRRVVSNVLLTIDLTEMVMSEAVSLNAEFIISYHPPIFAPLKRITQKSWKERIVTLCLQEGIAVYSPHTCWDNVTNGVNDWLAAALPLASAQPIQENLS-NPS--------YGSGRICVVQGELTLDRAIERIKKYTQVKTLQVARSHSAL-MNDTPIRTFAVCAGSGGSVLKGV--KADLYITGEMSHHEILDATHQNIH-----VVLLGHSNSERGYL-PVFQKILANMLQDYSDVNIHVSNFDADPIKV 299
[Close]
BLAST of GM18668 vs. TrEMBL
Match: T1DQA5 (Putative nif3-like protein (Fragment) OS=Anopheles aquasalis OX=42839 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 4.541e-71
Identity = 128/279 (45.88%), Postives = 182/279 (65.23%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDAT-ENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY-NVEVIISDSDSDPLIV 1004
            +  KL EFAP  L E WDNVG+L+EP     +S IL+T DLT  VM+EA+S N + IISYHPPIF P+K I Q  WKE ++T C++  I VYSPHT  D+V  G+NDW+ +   +   +PI+ N + NP+        +GSGR C ++  ++L  AIE +K+   +K L +A+SH  L +N+  I T AVC GSG S+ K +  +ADL++TGEMSHHE+LDAT +N+      ++  GHSNSERG+L  V+Q  L   L++Y +V + +S+ D+DP+ V
Sbjct:   26 VVAKLNEFAPESLCEKWDNVGLLIEPYMRRVVSNILLTIDLTEMVMSEAVSLNAEFIISYHPPIFAPLKRITQKSWKERIVTLCLQEGIAVYSPHTCWDNVTNGVNDWLAAALPLASAQPIQENLS-NPS--------YGSGRICVVQGELTLDRAIERIKKYTQVKTLQVARSHSAL-MNDTPIRTFAVCAGSGGSVLKGV--KADLYITGEMSHHEILDATHQNIH-----VVLLGHSNSERGYL-PVFQKILANMLQDYSDVNIHVSNFDADPIKV 286
[Close]
BLAST of GM18668 vs. TrEMBL
Match: A0A2M4AT60 (Uncharacterized protein (Fragment) OS=Anopheles triannulatus OX=58253 PE=4 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 7.076e-71
Identity = 127/279 (45.52%), Postives = 182/279 (65.23%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDAT-ENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY-NVEVIISDSDSDPLIV 1004
            +  KL EFAP  L E WDNVG+L+EP     +S +L+T DLT  VM+EA+S N + IISYHPPIF P+K I Q  WKE ++T C++  I VYSPHT  D+V  G+NDW+ +   +   +PI+ N + NP+        +GSGR C ++  ++L  AIE +K+   +K L +A+SH  L +N+  I T AVC GSG S+ K +  +ADL++TGEMSHHE+LDAT +N+      ++  GHSNSERG+L  V+Q  L   L++Y +V + +S+ D+DP+ V
Sbjct:   26 VVAKLNEFAPESLCEKWDNVGLLIEPYMRRVVSNVLLTIDLTEMVMSEAVSLNAEFIISYHPPIFAPLKRITQKSWKERIVTLCLQEGIAVYSPHTCWDNVTNGVNDWLAAALPLASAQPIQENLS-NPS--------YGSGRICVVQGELTLDRAIERIKKYTQVKTLQVARSHSAL-MNDTPIRTFAVCAGSGGSVLKGV--KADLYITGEMSHHEILDATHQNIH-----VVLLGHSNSERGYL-PVFQKILANMLQDYSDVNIHVSNFDADPIKV 286
[Close]
BLAST of GM18668 vs. TrEMBL
Match: A0A2M3Z6M3 (Uncharacterized protein (Fragment) OS=Anopheles braziliensis OX=58242 PE=4 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.445e-70
Identity = 128/279 (45.88%), Postives = 181/279 (64.87%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDAT-ENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY-NVEVIISDSDSDPLIV 1004
            +  KL EFAP  L E WDNVG+L+EP     +S IL+T DLT  VM+EA+S N + IISYHPPIF P+K I Q  WKE ++T C++  I VYSPHT  D+V  G+NDW+ +   +   +PI+ N + NP+        +GSGR C ++  ++L  AIE +K    +K L +A+SH  L +N+  I T AVC GSG S+ K +  +ADL++TGEMSHHE+LDAT +N+      ++  GHSNSERG+L  V+Q  L   L++Y +V + +S+ D+DP+ V
Sbjct:   26 VMAKLNEFAPESLCEKWDNVGLLIEPYMRRVVSNILLTIDLTEMVMSEAVSLNAEFIISYHPPIFAPLKRITQKSWKERIVTLCLQEGIAVYSPHTCWDNVTNGVNDWLAAALPLASAQPIQENLS-NPS--------YGSGRICVVQGELTLDRAIERIKNYTQVKTLQVARSHSAL-MNDTPIRTFAVCAGSGGSVLKGV--KADLYITGEMSHHEILDATHQNIH-----VVLLGHSNSERGYL-PVFQKILANMLQDYSDVNIHVSNFDADPIKV 286
[Close]
BLAST of GM18668 vs. Ensembl Cavefish
Match: nif3l1 (NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80])

HSP 1 Score: 124.79 bits (312), Expect = 5.500e-32
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFN 515
            +   LE+ APL LAESWDNVG+LVEP     I  IL+TNDLT  VM+EA      ++ISYHPP+F P K + Q  WK+ L  + ++  I V+SPHT+ DS   G+NDW++    
Sbjct:   77 VLGVLEQLAPLSLAESWDNVGLLVEPSRPRPIKTILLTNDLTSAVMDEAEEMACDLVISYHPPLFRPFKRLLQKDWKQRLAVRAVEGGIAVFSPHTSWDSAKDGLNDWLIGGLG 190

HSP 2 Score: 93.9745 bits (232), Expect = 5.308e-21
Identity = 63/143 (44.06%), Postives = 85/143 (59.44%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLA-KSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY---NVEVIISDSDSDPLIVV 1007
            G GR+  L  P+S+ +A++ +K    L  L LA    K LD     + + AVC GSG S+ + +  +ADL++TGEMSHHE+LDA  N    TSVIL+  HSNSERGFL  +     K+ L N+   +V + IS  D DPL VV
Sbjct:  290 GQGRHVVLDEPLSVGVAVQKMKTHLGLPHLRLALGEQKTLDA---VVKSAAVCAGSGASVLQGV--KADLYITGEMSHHEVLDAVAN---GTSVILS-DHSNSERGFLTVI-----KQRLANHLPDSVTIAISKRDRDPLEVV 418
[Close]
BLAST of GM18668 vs. Ensembl Sea Lamprey
Match: nif3l1 (NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80])

HSP 1 Score: 134.035 bits (336), Expect = 1.164e-36
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNL 554
            + + LEE AP  LAESWDNVG+LVEP     +S +L+TNDLT  V+ EA+    QM++SYHPP+F P++ +    WKE L+   ++  + VYSPHT  D++ GG+NDW+          P++T++ L
Sbjct:    6 LVRTLEELAPPALAESWDNVGLLVEPSPPHCVSTLLLTNDLTEEVLQEAVRLPAQMVLSYHPPVFAPLRSLTMRSWKERLVVTALENRVAVYSPHTCYDALRGGVNDWLAEGLGEGSVTPLKTSEAL 132

HSP 2 Score: 84.7297 bits (208), Expect = 8.704e-19
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 3 
Query:  591 GSGRYCELKNPISLSIAIEVLKRRFMLKDLLLA-KSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            G GR C L  P+S S  +  +K+  +L  + LA  + K+ D    ++ T+A+C GSG S+ K +Q  ADL++TGE+SHHE+LDA   V    SVIL   HSN+ERGFL  +    L K  +  N+ V  S+ D DPL VV
Sbjct:  224 GMGRLCTLAEPVSTSTLVSRIKQHLLLPHVRLALGAGKSPDS---TVRTVALCAGSGGSVLKGVQ--ADLYLTGELSHHEVLDA---VSRGVSVILCE-HSNTERGFLPRLRLLLLDKLQQKLNIHV--SEVDRDPLTVV 352
[Close]
BLAST of GM18668 vs. Ensembl Yeast
Match: NIF3 (Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000003189])

HSP 1 Score: 156.377 bits (394), Expect = 5.973e-46
Identity = 101/286 (35.31%), Postives = 151/286 (52.80%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAE-SWDNVGILVEPENE----VDI---SKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIR-QSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIV 1004
            + + + +F P   A+ SWDN G+L++         D    +K+L+T DLT  V  EA+  N  +I++YHP IF     +   +  +     K I+  I VY PHTA+D+  GG+NDW++   N    E +  +  L       D +I G GR+ E    ISL   ++ +KR   +  + +A        N+L I  +AVC GSG  +FK L++  DL+ TGEMSHHE+L   E  +T    ++   HSN+ERGFL DV    +K  L++   EV++S  D DPL V
Sbjct:   13 LVRSITKFYPQKYADKSWDNTGLLIDCSTAQVTTADANAKTKVLLTVDLTKSVAQEAVDANCNVIVAYHPFIFPSWNRLSPHTNPQHETAIKLIQYGISVYCPHTAVDAARGGVNDWLVRGLN--NGENVAKSYALETVSGETDDLI-GYGRFVEFNKDISLEQIVKNVKRVLRVPYVQVASLAAPSAWNQLKIKKVAVCAGSGSGVFKQLKEDVDLYYTGEMSHHEVLKWKEMGKT----VIVCNHSNTERGFLQDV----MKGLLQDEGHEVVVSKMDCDPLTV 287
[Close]
BLAST of GM18668 vs. Ensembl Nematostella
Match: EDO39288 (Putative GTP cyclohydrolase 1 type 2 [Source:UniProtKB/TrEMBL;Acc:A7SAJ3])

HSP 1 Score: 135.191 bits (339), Expect = 8.259e-37
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 3 
Query:  174 IFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPI 536
            +   LE +AP  LAE WDNVG+LVEP  + ++  IL+TNDLT +V+ EAI K   MIISYHPPIF P+K +    +KE +I K I+  I +YSPHTA D+V GG+NDW+         +PI
Sbjct:    6 VVSNLESWAPTSLAEKWDNVGLLVEPSGQHNVRSILLTNDLTEKVLQEAIEKRANMIISYHPPIFVPLKRLTSKSFKERIIVKAIEERIAIYSPHTAFDAVFGGVNDWLAKGLGRGSVDPI 126

HSP 2 Score: 90.5077 bits (223), Expect = 1.718e-20
Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 3 
Query:  498 ILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNY---NVEVIISDSDSDPLIVV 1007
            IL  + I + E  +  K   P          GSGR C L  P++L   I  +K+   L  L +A +       +  ++T+A+C GSG S+ + +   AD+++TGEMSHHE+L+A   V     VIL   HSN+ERGFLV       +++L N     V+V++S++D+DPL+VV
Sbjct:  198 ILQSYTIYYLEIYQLAKKPIPGT--------GSGRLCTLDTPVTLPDIIHRIKKHLQLPHLRVAYAPSK--AKDTLLSTVALCAGSGASVLQGVA--ADVYLTGEMSHHEVLEA---VSRGVHVILCE-HSNTERGFLVP-----FRQQLYNMLSGQVQVMVSETDADPLLVV 349
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BLAST of GM18668 vs. Ensembl Medaka
Match: nif3l1 (NGG1 interacting factor 3 like 1 [Source:NCBI gene;Acc:101174053])

HSP 1 Score: 196.052 bits (497), Expect = 1.513e-59
Identity = 123/351 (35.04%), Postives = 173/351 (49.29%), Query Frame = 3 
Query:  177 FKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILS-----------------------EFNIQFKEPIETNKNLNPAPDGGDKII---------------------------------------------------HGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
             + LE+ APL LAESWDNVG+LVEP     +  IL+TNDLT  VM EA + +  +IISYHPP+F P+K + Q  WK+ L  + ++  I V+SPHT+ DSV GG+NDW+++                       EF ++  E + T      A DGG  +I                                                   HG GR   L+ P++++ A++ +K   +L  L LA         E S+ T+A C GSG S+   +  +ADL++TGEMSHHE+LDA        + +L + HSNSERGFL  V++  L   L   +V V++S  D DPL VV
Sbjct:    7 LQVLEQLAPLSLAESWDNVGLLVEPSKPRPVKTILLTNDLTDAVMAEAEALSCDLIISYHPPLFRPVKRLNQKDWKQRLAIRAVEAGIAVFSPHTSWDSVKGGVNDWLVAGLGSGQVSVLSQALGNASHCHKLEFTVRSTEELNTVMKELKACDGGTSLISTGTRADSSGIHASVLCSDSALTPSVQTLLQHSCSSQSLSILKLEKPPLPGHGQGRLSVLEQPVTVAEAVQRMKSHLVLSHLRLALGWGQ--TLESSVRTVAACAGSGASVLNGV--KADLYITGEMSHHEVLDAAAQ----GTGVLLSDHSNSERGFLA-VFRERLAVRLPE-SVAVVVSKVDRDPLEVV 347
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BLAST of GM18668 vs. Ensembl Medaka
Match: nif3l1 (NGG1 interacting factor 3 like 1 [Source:NCBI gene;Acc:101174053])

HSP 1 Score: 194.897 bits (494), Expect = 2.830e-58
Identity = 123/348 (35.34%), Postives = 172/348 (49.43%), Query Frame = 3 
Query:  186 LEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILS-----------------------EFNIQFKEPIETNKNLNPAPDGGDKII---------------------------------------------------HGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            LE+ APL LAESWDNVG+LVEP     +  IL+TNDLT  VM EA + +  +IISYHPP+F P+K + Q  WK+ L  + ++  I V+SPHT+ DSV GG+NDW+++                       EF ++  E + T      A DGG  +I                                                   HG GR   L+ P++++ A++ +K   +L  L LA         E S+ T+A C GSG S+   +  +ADL++TGEMSHHE+LDA        + +L + HSNSERGFL  V++  L   L   +V V++S  D DPL VV
Sbjct:   90 LEQLAPLSLAESWDNVGLLVEPSKPRPVKTILLTNDLTDAVMAEAEALSCDLIISYHPPLFRPVKRLNQKDWKQRLAIRAVEAGIAVFSPHTSWDSVKGGVNDWLVAGLGSGQVSVLSQALGNASHCHKLEFTVRSTEELNTVMKELKACDGGTSLISTGTRADSSGIHASVLCSDSALTPSVQTLLQHSCSSQSLSILKLEKPPLPGHGQGRLSVLEQPVTVAEAVQRMKSHLVLSHLRLALGWGQ--TLESSVRTVAACAGSGASVLNGV--KADLYITGEMSHHEVLDAAAQ----GTGVLLSDHSNSERGFLA-VFRERLAVRLPE-SVAVVVSKVDRDPLEVV 427
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BLAST of GM18668 vs. Planmine SMEST
Match: SMESG000032629.1 (SMESG000032629.1)

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 3 
Query:  144 MALKYSINQLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 1007
            MALKYSINQLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV
Sbjct:    1 MALKYSINQLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITNDLTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIYVYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHGSGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAVCPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSNSERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV 288
The following BLAST results are available for this feature:
BLAST of GM18668 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NIF3L12.726e-3339.57NGG1 interacting factor 3 like 1 [Source:HGNC Symb... [more]
NIF3L17.043e-3339.57NGG1 interacting factor 3 like 1 [Source:HGNC Symb... [more]
NIF3L19.671e-3341.54NGG1 interacting factor 3 like 1 [Source:HGNC Symb... [more]
NIF3L11.291e-3240.15NGG1 interacting factor 3 like 1 [Source:HGNC Symb... [more]
NIF3L12.600e-3240.15NGG1 interacting factor 3 like 1 [Source:HGNC Symb... [more]
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BLAST of GM18668 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GM18668 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG42781.819e-7045.52gene:FBgn0014092 transcript:FBtr0080834[more]
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BLAST of GM18668 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
nif3l11.449e-3550.00NIF3 NGG1 interacting factor 3-like 1 (S. cerevisi... [more]
nif3l11.713e-1845.83NIF3 NGG1 interacting factor 3-like 1 (S. cerevisi... [more]
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BLAST of GM18668 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
nif3l11.100e-3242.19NGG1 interacting factor 3 like 1 [Source:NCBI gene... [more]
pltp1.184e-3142.19phospholipid transfer protein [Source:Xenbase;Acc:... [more]
pltp6.979e-3147.71phospholipid transfer protein [Source:Xenbase;Acc:... [more]
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BLAST of GM18668 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Nif3l15.639e-3443.94Ngg1 interacting factor 3-like 1 (S. pombe) [Sourc... [more]
Nif3l15.976e-3448.62Ngg1 interacting factor 3-like 1 (S. pombe) [Sourc... [more]
Nif3l12.531e-3338.82Ngg1 interacting factor 3-like 1 (S. pombe) [Sourc... [more]
Nif3l12.531e-3338.82Ngg1 interacting factor 3-like 1 (S. pombe) [Sourc... [more]
Nif3l11.594e-3050.00Ngg1 interacting factor 3-like 1 (S. pombe) [Sourc... [more]
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BLAST of GM18668 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9NK57|NIF3L_DROME1.824e-6945.52NIF3-like protein 1 OS=Drosophila melanogaster OX=... [more]
sp|P53081|NIF3_YEAST4.148e-4435.31NGG1-interacting factor 3 OS=Saccharomyces cerevis... [more]
sp|O94404|NIF3_SCHPO2.396e-4237.20Protein NIF3 homolog OS=Schizosaccharomyces pombe ... [more]
sp|Q4V7D6|NIF3L_RAT9.669e-3341.61NIF3-like protein 1 OS=Rattus norvegicus OX=10116 ... [more]
sp|Q9EQ80|NIF3L_MOUSE1.771e-3238.82NIF3-like protein 1 OS=Mus musculus OX=10090 GN=Ni... [more]
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BLAST of GM18668 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A182FK901.445e-7145.88Uncharacterized protein OS=Anopheles albimanus OX=... [more]
A0A2M4AT124.208e-7142.81Putative conserved secreted protein OS=Anopheles t... [more]
T1DQA54.541e-7145.88Putative nif3-like protein (Fragment) OS=Anopheles... [more]
A0A2M4AT607.076e-7145.52Uncharacterized protein (Fragment) OS=Anopheles tr... [more]
A0A2M3Z6M31.445e-7045.88Uncharacterized protein (Fragment) OS=Anopheles br... [more]
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BLAST of GM18668 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nif3l15.500e-3248.25NIF3 NGG1 interacting factor 3-like 1 (S. cerevisi... [more]
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BLAST of GM18668 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nif3l11.164e-3644.09NIF3 NGG1 interacting factor 3-like 1 (S. cerevisi... [more]
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BLAST of GM18668 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
NIF35.973e-4635.31Protein of unknown function; similar to Listeria m... [more]
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BLAST of GM18668 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO392888.259e-3750.41Putative GTP cyclohydrolase 1 type 2 [Source:UniP... [more]
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BLAST of GM18668 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
nif3l11.513e-5935.04NGG1 interacting factor 3 like 1 [Source:NCBI gene... [more]
nif3l12.830e-5835.34NGG1 interacting factor 3 like 1 [Source:NCBI gene... [more]
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BLAST of GM18668 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000032629.10.000e+0100.00SMESG000032629.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30003816 ID=SMED30003816|Name=GM18668|organism=Schmidtea mediterranea sexual|type=transcript|length=1037bp
CGATTACTATATGGATGACCTAGATTTTGGTTTTAGTGAAATGTTTGTTT
TTACTTAATCAACCAGATTTAAATTGGCCTTGCATAGCGAGAAATTCAAT
TTCTTCACTAGTAAATAGGAAATTCATTTCTCATTCAATATTAATGGCGC
TGAAATATTCGATAAATCAATTAATTTTTAAAAAACTTGAAGAATTTGCT
CCGCTTGTGTTGGCAGAATCATGGGATAATGTTGGAATATTGGTTGAACC
TGAAAATGAAGTTGATATTTCAAAAATACTAATTACCAATGATTTGACCC
ATCGAGTTATGAACGAGGCCATTTCTAAAAATGTCCAAATGATTATTTCC
TATCACCCTCCCATTTTTACGCCAATCAAGCATATTAGGCAAAGTTATTG
GAAAGAATCTTTGATAACAAAATGCATTAAAAGAGATATTTATGTTTATA
GTCCTCATACAGCGCTCGATTCAGTAAACGGTGGAATAAATGATTGGATT
TTATCTGAATTTAATATACAATTCAAAGAACCAATTGAAACGAATAAAAA
CCTAAATCCAGCACCAGATGGCGGCGATAAAATAATTCACGGAAGCGGGC
GGTATTGTGAATTGAAAAATCCAATTTCACTTTCTATTGCAATTGAAGTA
CTCAAACGGCGCTTTATGTTAAAGGATTTACTTCTTGCCAAAAGTCATAA
AAACTTGGATGTGAACGAATTGTCAATTAATACGATTGCTGTTTGCCCTG
GGAGCGGACAATCACTTTTTAAAATTCTTCAAAAACGAGCAGATTTGTGG
GTCACCGGAGAAATGAGTCATCATGAATTGCTTGACGCAACTGAAAATGT
CGAAACTCCGACTTCAGTTATTCTGACAGCTGGCCATTCGAATTCAGAAA
GGGGTTTTCTTGTTGACGTATATCAACCCTGGTTAAAAAAGGAATTGAAA
AATTACAACGTTGAAGTCATAATCAGTGATTCAGACTCGGATCCACTGAT
TGTTGTGTGACATGTTTTTTCTGGAATAAATTTTGGT
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protein sequence of SMED30003816-orf-1

>SMED30003816-orf-1 ID=SMED30003816-orf-1|Name=SMED30003816-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=289bp
MALKYSINQLIFKKLEEFAPLVLAESWDNVGILVEPENEVDISKILITND
LTHRVMNEAISKNVQMIISYHPPIFTPIKHIRQSYWKESLITKCIKRDIY
VYSPHTALDSVNGGINDWILSEFNIQFKEPIETNKNLNPAPDGGDKIIHG
SGRYCELKNPISLSIAIEVLKRRFMLKDLLLAKSHKNLDVNELSINTIAV
CPGSGQSLFKILQKRADLWVTGEMSHHELLDATENVETPTSVILTAGHSN
SERGFLVDVYQPWLKKELKNYNVEVIISDSDSDPLIVV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0042802identical protein binding
GO:0046872metal ion binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
Vocabulary: INTERPRO
TermDefinition
IPR036069GTP_cyclohydrolase_I/Nif3_sf
IPR002678GTP_cyclohydrolase_I/Nif3
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.1390.30coord: 11..256
e-value: 5.5E-63
score: 214.8
NoneNo IPR availableGENE3DG3DSA:3.40.1390.30coord: 106..247
e-value: 5.5E-63
score: 214.8
NoneNo IPR availablePANTHERPTHR13799:SF13NIF3-LIKE PROTEIN 1coord: 11..287
IPR002678GTP cyclohydrolase 1 type 2/Nif3TIGRFAMTIGR00486TIGR00486coord: 9..283
e-value: 7.2E-53
score: 177.8
IPR002678GTP cyclohydrolase 1 type 2/Nif3PFAMPF01784NIF3coord: 11..269
e-value: 3.6E-66
score: 223.3
IPR002678GTP cyclohydrolase 1 type 2/Nif3PANTHERPTHR13799NGG1 INTERACTING FACTOR 3coord: 11..287
IPR036069GTP cyclohydrolase 1 type 2/Nif3 superfamilySUPERFAMILYSSF102705NIF3 (NGG1p interacting factor 3)-likecoord: 11..286