RNA helicase

Overview
NameRNA helicase
Smed IDSMED30003811
Length (bp)1641
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of RNA helicase (SMED30003811) t-SNE clustered cells

Violin plots show distribution of expression levels for RNA helicase (SMED30003811) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of RNA helicase (SMED30003811) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for RNA helicase (SMED30003811) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30003811

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 16

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30003811h1SMcG0002751 SmedASXL_009296SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30003811h1SMcG0002751 SmedASXL_009296SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
muscle cellSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
muscle cellSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30003811h1SMcG0002752 dd_Smed_v4_2431_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30003811h1SMcG0002752 OX_Smed_1.0.12964ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
head regionSMED30003811h1SMcG0002752 OX_Smed_1.0.12964ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of RNA helicase vs. Ensembl Human
Match: DDX18 (DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741])

HSP 1 Score: 456.447 bits (1173), Expect = 1.379e-153
Identity = 233/468 (49.79%), Postives = 312/468 (66.67%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVS 1515
            KA+K+M    MT IQ + I  LLE +D++ AAKTGSGKTLAFL+P V  ++   F PR+GT  +I+SPTREL++QTF VL++L+ H     GL++GG+NR  EA+ L  G+ I+VATPGRLLDH+ NT  F++  LQ L+IDEADR+++ GF EE+  I++ LP +RQT+LFSAT                            KV  LA +S+K+  + + +  +K         NATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VKY YEL N I++PVLA+HGKQ Q KR   F +F   ++  + CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L ++KVP++EF+F  SK+  IQ   EK++E N  L  SA+  + +++RAY S SL   F+V+ L+L  +A +FG K PP V ++V+
Sbjct:  192 KAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDDKA--------NATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVN 626
[Close]
BLAST of RNA helicase vs. Ensembl Human
Match: DDX10 (DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:2735])

HSP 1 Score: 329.331 bits (843), Expect = 3.532e-104
Identity = 185/464 (39.87%), Postives = 268/464 (57.76%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            K L++     +T IQ + I   L+ KDV+GAAKTGSGKTLAFLVP++  +    +    G   +I+SPTREL+ QTFEVLRK+  + +   GL+IGG + + EA+ +   + ILV TPGRLL H++ T  F    LQ L++DEADR+++ GF + M A++  LPKKRQT+LFSAT                           + V  LA LS+K    +    K K          +T + L Q Y+VC+   +  +LY+F++ + KKK +VF S+C EV+Y Y +F  +   V +LALHG+Q Q +R++ + +F    AA++F TD+AARGLD P V+WVLQ+D P+D   YIHR GRTAR    G+AL+ L P E   +  L + KVPV E + +  K++ +Q+  E I+  +  L+  A+  F ++VR+ Y       FDV KL +   A + GL   P V
Sbjct:   82 KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKNPEYVWVHEKAKY---------STPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRV 510
[Close]
BLAST of RNA helicase vs. Ensembl Human
Match: DDX10 (DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:2735])

HSP 1 Score: 329.717 bits (844), Expect = 9.002e-103
Identity = 185/464 (39.87%), Postives = 268/464 (57.76%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            K L++     +T IQ + I   L+ KDV+GAAKTGSGKTLAFLVP++  +    +    G   +I+SPTREL+ QTFEVLRK+  + +   GL+IGG + + EA+ +   + ILV TPGRLL H++ T  F    LQ L++DEADR+++ GF + M A++  LPKKRQT+LFSAT                           + V  LA LS+K    +    K K          +T + L Q Y+VC+   +  +LY+F++ + KKK +VF S+C EV+Y Y +F  +   V +LALHG+Q Q +R++ + +F    AA++F TD+AARGLD P V+WVLQ+D P+D   YIHR GRTAR    G+AL+ L P E   +  L + KVPV E + +  K++ +Q+  E I+  +  L+  A+  F ++VR+ Y       FDV KL +   A + GL   P V
Sbjct:   82 KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKNPEYVWVHEKAKY---------STPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRV 510
[Close]
BLAST of RNA helicase vs. Ensembl Human
Match: DDX10 (DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:2735])

HSP 1 Score: 329.717 bits (844), Expect = 2.061e-102
Identity = 185/464 (39.87%), Postives = 268/464 (57.76%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            K L++     +T IQ + I   L+ KDV+GAAKTGSGKTLAFLVP++  +    +    G   +I+SPTREL+ QTFEVLRK+  + +   GL+IGG + + EA+ +   + ILV TPGRLL H++ T  F    LQ L++DEADR+++ GF + M A++  LPKKRQT+LFSAT                           + V  LA LS+K    +    K K          +T + L Q Y+VC+   +  +LY+F++ + KKK +VF S+C EV+Y Y +F  +   V +LALHG+Q Q +R++ + +F    AA++F TD+AARGLD P V+WVLQ+D P+D   YIHR GRTAR    G+AL+ L P E   +  L + KVPV E + +  K++ +Q+  E I+  +  L+  A+  F ++VR+ Y       FDV KL +   A + GL   P V
Sbjct:   82 KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKNPEYVWVHEKAKY---------STPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRV 510
[Close]
BLAST of RNA helicase vs. Ensembl Human
Match: DDX55 (DEAD-box helicase 55 [Source:HGNC Symbol;Acc:HGNC:20085])

HSP 1 Score: 257.684 bits (657), Expect = 8.838e-78
Identity = 171/485 (35.26%), Postives = 262/485 (54.02%), Query Frame = 1 
Query:  121 ALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEVLRKLVAH-TELRTGLLIGGNN--RQVEAKYLQEGVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEF--EFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            AL+++    MTP+Q   IP  + NKDV   A TGSGKTLAF++P++  +L    +  +    AII++PTREL++Q  EVL     H  E    L IGG N    VE ++ Q+G  I+VATPGRL D        L        L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT                           ++V  L    ++ N + + + ++ + A+       T S+L   Y+VCK  ++F  L  F++ ++++K +VF STC  V+Y+ +   ++   V ++ +HGK    KR K F +F + ++ I+ CTDV ARG+DIP V+WVLQYDPP +   ++HR GRTAR G+ G AL+FL P E  +++ LA N K P+ E   + + + +LP  +S   +  ++ A+       F ++V+AY     +  F +  LD A+LA+ F L   P  M  + GK  P
Sbjct:   23 ALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVE-RFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT-------------------------QTQEVENLVRAGLR-NPVRVSVKEKGVAASSA---QKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKS---MALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPK-MPELRGKQFP 472
[Close]
BLAST of RNA helicase vs. Ensembl Celegans
Match: B0511.6 (RNA helicase [Source:UniProtKB/TrEMBL;Acc:O61815])

HSP 1 Score: 403.675 bits (1036), Expect = 3.401e-135
Identity = 226/483 (46.79%), Postives = 302/483 (62.53%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGN-AGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVG 1560
            KA++ +    MT IQ + I  LLE KDV+ +AKTGSGKTLAFL+P +  +   N++  +GT  II+SPTRELS+QT+ VL +L+  + L  GL++GG+NR  E   L +GV+ILVATPGRLLDHL NT  FL   ++ LIIDEADR+++ GF  EM  ++R LPK+RQ++LFSAT                            KV  L  L++  N + + + ++  EA V G        L QGY+V     R  LL+TF+KKN+ KK+MVF S+C  VK+ +EL N I++P +++HGKQ Q KR   F +F + E  I+ CTDVAARGLDIP VDW++QYDP D+P+EYIHRVGRTAR  N +G+AL+ LRPEE  FL  L   KV + EFEF  SK+  IQ   E ++  N  L  SAK  +  ++RAY S SL   FDV  +DL A++K+FG   PP V + +S K  PK   R K  G
Sbjct:   81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT-------------------------HSPKVDELVKLALHSNPVRVSVHEKAEEATVEG--------LQQGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKSAKEAYKCYLRAYDSHSLKDIFDVTNMDLTAVSKSFGFSVPPFVDLPISNK--PKVEIRSKLSG 528
[Close]
BLAST of RNA helicase vs. Ensembl Celegans
Match: Y23H5B.6 (RNA helicase [Source:UniProtKB/TrEMBL;Acc:A0A061ACL9])

HSP 1 Score: 290.812 bits (743), Expect = 2.177e-89
Identity = 162/471 (34.39%), Postives = 256/471 (54.35%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLAC------LSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            + LKD +  K T IQ   I + L   DV+GAAKTGSGKTLA ++P++  +  + + P +G  A+I+SPTREL++QTF  +  + AH     GL+IGG++   E   +  G+ I+V TPGRLL H++         LQ L++DEADR+++ GF +++ +I+  LP +RQT+LFSAT   +                          L   C      +S+ EN                    AT   L Q YV+ +   +   L++FI+ ++KKK +VF+S+C + ++  E F+ +   +PV+ L G  +Q KR++ F KF+E++AA++  TDVA+RGLD   +DWV+Q D P    +YIHRVGR+AR  ++G +L+ + P +E   +  L K+ +P+ E +     M  ++     I+  +  L+  A+     ++R+ Y       FDV  +D AALA +FGL   P V
Sbjct:   89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKD-----------------------LCRVCTNDPVFVSVHENASA-----------------ATPDNLKQSYVIVEEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEYAQKSIVAYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRV 518
[Close]
BLAST of RNA helicase vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4332507:1 gene:WBGene00019219.1 transcript:H20J04.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4)

HSP 1 Score: 221.09 bits (562), Expect = 2.173e-65
Identity = 132/386 (34.20%), Postives = 205/386 (53.11%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLN---NTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIK----KNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFL 1254
            + L+ M +   TP+Q  CIP +LE  D++G A+TG+GKTLAF +P++ K+   + +P +G  A+I++PTREL+ Q  E    L     L+  +++GG +   +A+ L E   ++VATPGRL D +    +T   +F ++Q  ++DEADR++E  + +++  I   + +KRQT+L SAT+                            +  L  +S ++     D  K+         D +TV +L Q YVVC  + +   L   +K    KN K  +M+F  TC E +    +F  +   V +LH +  Q +RL     F      +I CTDVA+RGLDIP VD V+ ++ P  PK YIHRVGR+ARAG  G AL F+   + + L
Sbjct:  102 QQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL---SVDP-YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATI-------------------------TNNINMLHRVSTRKPYFFEDKGKD---------DESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELL 449
[Close]
BLAST of RNA helicase vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4334091:1 gene:WBGene00019219.1 transcript:H20J04.4b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4)

HSP 1 Score: 221.476 bits (563), Expect = 7.383e-65
Identity = 137/408 (33.58%), Postives = 214/408 (52.45%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLN---NTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIK----KNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLP 1320
            + L+ M +   TP+Q  CIP +LE  D++G A+TG+GKTLAF +P++ K+   + +P +G  A+I++PTREL+ Q  E    L     L+  +++GG +   +A+ L E   ++VATPGRL D +    +T   +F ++Q  ++DEADR++E  + +++  I   + +KRQT+L SAT+                            +  L  +S ++     D  K+         D +TV +L Q YVVC  + +   L   +K    KN K  +M+F  TC E +    +F  +   V +LH +  Q +RL     F      +I CTDVA+RGLDIP VD V+ ++ P  PK YIHRVGR+ARAG  G AL F+   + + L  + +    V   + DE K+ P
Sbjct:  102 QQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL---SVDP-YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATI-------------------------TNNINMLHRVSTRKPYFFEDKGKD---------DESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQ----VIGKKLDELKVSP 467
[Close]
BLAST of RNA helicase vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4334484:1 gene:WBGene00019219.1 transcript:H20J04.4b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4)

HSP 1 Score: 221.476 bits (563), Expect = 7.383e-65
Identity = 137/408 (33.58%), Postives = 214/408 (52.45%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLN---NTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIK----KNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLP 1320
            + L+ M +   TP+Q  CIP +LE  D++G A+TG+GKTLAF +P++ K+   + +P +G  A+I++PTREL+ Q  E    L     L+  +++GG +   +A+ L E   ++VATPGRL D +    +T   +F ++Q  ++DEADR++E  + +++  I   + +KRQT+L SAT+                            +  L  +S ++     D  K+         D +TV +L Q YVVC  + +   L   +K    KN K  +M+F  TC E +    +F  +   V +LH +  Q +RL     F      +I CTDVA+RGLDIP VD V+ ++ P  PK YIHRVGR+ARAG  G AL F+   + + L  + +    V   + DE K+ P
Sbjct:  102 QQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL---SVDP-YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATI-------------------------TNNINMLHRVSTRKPYFFEDKGKD---------DESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQ----VIGKKLDELKVSP 467
[Close]
BLAST of RNA helicase vs. Ensembl Fly
Match: pit (gene:FBgn0266581 transcript:FBtr0084174)

HSP 1 Score: 457.218 bits (1175), Expect = 4.427e-154
Identity = 234/478 (48.95%), Postives = 312/478 (65.27%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTAR-AGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            +A+K+M   +MT IQ + +  LL+ +D++GAA+TGSGKTLAFL+P V  +    F PR+GT  II+SPTRELS+QTF VL++L+AH     GL++GG+NRQVE++ L +G+ ILVATPGRLLDHL N+  FL+  LQ LIIDE DR++E GF EE+  I+  LPK+RQT+LFSAT                            ++  L+ L++K   + + +   +        D ATV  L QGY+VC    R  +L+TF+KKN+KKK+MVF S+C+ VKY +ELFN I++PV ++HGKQ Q KR   F +F   E+ I+ CTDVAARGLDIP VDW++QYDPPDDP+EYIHRVGRTAR +G +G AL+ +RPEE  FL  L   KVP+ EFEF   K+  IQ   EK++  N  L  SAK  F ++VRAY S  L   F+V+ LDL A+AK+FG   PP V + V      +  KR
Sbjct:  200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSAT-------------------------QTARIEALSKLALKSEPIYVGVHDNQ--------DTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKR 644
[Close]
BLAST of RNA helicase vs. Ensembl Fly
Match: pit (gene:FBgn0266581 transcript:FBtr0346345)

HSP 1 Score: 457.218 bits (1175), Expect = 4.427e-154
Identity = 234/478 (48.95%), Postives = 312/478 (65.27%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTAR-AGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            +A+K+M   +MT IQ + +  LL+ +D++GAA+TGSGKTLAFL+P V  +    F PR+GT  II+SPTRELS+QTF VL++L+AH     GL++GG+NRQVE++ L +G+ ILVATPGRLLDHL N+  FL+  LQ LIIDE DR++E GF EE+  I+  LPK+RQT+LFSAT                            ++  L+ L++K   + + +   +        D ATV  L QGY+VC    R  +L+TF+KKN+KKK+MVF S+C+ VKY +ELFN I++PV ++HGKQ Q KR   F +F   E+ I+ CTDVAARGLDIP VDW++QYDPPDDP+EYIHRVGRTAR +G +G AL+ +RPEE  FL  L   KVP+ EFEF   K+  IQ   EK++  N  L  SAK  F ++VRAY S  L   F+V+ LDL A+AK+FG   PP V + V      +  KR
Sbjct:  200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSAT-------------------------QTARIEALSKLALKSEPIYVGVHDNQ--------DTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKR 644
[Close]
BLAST of RNA helicase vs. Ensembl Fly
Match: pit (gene:FBgn0266581 transcript:FBtr0084175)

HSP 1 Score: 457.218 bits (1175), Expect = 4.427e-154
Identity = 234/478 (48.95%), Postives = 312/478 (65.27%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTAR-AGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            +A+K+M   +MT IQ + +  LL+ +D++GAA+TGSGKTLAFL+P V  +    F PR+GT  II+SPTRELS+QTF VL++L+AH     GL++GG+NRQVE++ L +G+ ILVATPGRLLDHL N+  FL+  LQ LIIDE DR++E GF EE+  I+  LPK+RQT+LFSAT                            ++  L+ L++K   + + +   +        D ATV  L QGY+VC    R  +L+TF+KKN+KKK+MVF S+C+ VKY +ELFN I++PV ++HGKQ Q KR   F +F   E+ I+ CTDVAARGLDIP VDW++QYDPPDDP+EYIHRVGRTAR +G +G AL+ +RPEE  FL  L   KVP+ EFEF   K+  IQ   EK++  N  L  SAK  F ++VRAY S  L   F+V+ LDL A+AK+FG   PP V + V      +  KR
Sbjct:  200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSAT-------------------------QTARIEALSKLALKSEPIYVGVHDNQ--------DTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKR 644
[Close]
BLAST of RNA helicase vs. Ensembl Fly
Match: CG5800 (gene:FBgn0030855 transcript:FBtr0074453)

HSP 1 Score: 274.633 bits (701), Expect = 1.820e-82
Identity = 162/474 (34.18%), Postives = 256/474 (54.01%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLI---DMSKEKLEANVVGGDNATV----SQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFL--SLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            +KAL +   +  T +Q   I   L+ KDV+GAA TGSGKTLAFL+P++  +  + +    G  AII+SPTREL+ Q FE L+K+  H +   GL+IGG N + E   + +   IL+ TPGRLL H++    F    ++ L++DEADR ++ GF + + +I+   P  RQT+LFSAT                             V  LA L++K+   +       +E+  A+     N  V      L Q YVV    D+  +L++FIK + K+KI+VF+++C + KY YE+F  +    P+LAL+G   Q +R+  +E F      ++F TDVA+RGLD P V+WV+Q D P+D  +YIHR GR+AR    G+ L+ L P E +++  +L  +  + +   + D  K+   +   E  +     L+ +A+  F +++++ +   +   F+V  LDL A A++ GL   P V
Sbjct:   84 QKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSAT-------------------------QTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRV 531
[Close]
BLAST of RNA helicase vs. Ensembl Fly
Match: CG9630 (gene:FBgn0037561 transcript:FBtr0081866)

HSP 1 Score: 228.409 bits (581), Expect = 6.169e-67
Identity = 167/486 (34.36%), Postives = 242/486 (49.79%), Query Frame = 1 
Query:  145 KMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHG---TAAIIMSPTRELSVQTFEVLRKLVAHTELR---TGLLIGGNNRQVE-AKYLQEGVTILVATPGRLLDHLNNTKFFLFHR-------------LQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQK--KKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEFDES-------KMLP-IQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSC-FDVHKLDLAALAKTFGLKEPPHV 1500
            +MTP+Q   IP LL  KDV   A TGSGKTLAFLVP++  +   + E   G     A+++SPTREL+ Q  EVL + + H +L      L++GGN+ + + A   +E   ILV TPGRL D        LF R             L+ L++DEADRL++ GF   +  I+  LP++R+T LFSAT                            +V  L    ++ N +L+ + KEK   N       T ++L   Y + +P  +F  L  F+        K+MVF  TC  V+Y+ E    +     VL +HGK    KR    EKF     A++ CTDV ARGLD+P ++WV+Q+DPP     ++HRVGRTAR GN G AL+FL P E  ++  L  N KV +T+   +E+       K LP + +   ++  ++  +       F + VRAY     S    +  LDL  +A  +GL + P +
Sbjct:   29 QMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTPGRLED--------LFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSAT-------------------------QTTEVTDLIRAGLR-NPVLVSV-KEKASVN-------TPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKMKN-KRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRM 471
[Close]
BLAST of RNA helicase vs. Ensembl Zebrafish
Match: ddx18 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685])

HSP 1 Score: 460.685 bits (1184), Expect = 9.423e-156
Identity = 239/478 (50.00%), Postives = 312/478 (65.27%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            K +K+M    MT IQ + I  LLE +DV+ AAKTGSGKTLAFL+P +  +    F PR+GT  I++SPTREL++QT+ VL++L+ H     GL++GG+NR  EA+ L  GV ILVATPGRLLDHL NT  F+F  LQ LIIDEADR++E GF EE+  I++ LPKKRQ++LFSAT                            KV  LA +S+K+  + + +   K        D ATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VK+ YEL N I++PV+A+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++Q+DPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L + KVP++EFEF  +K+  IQ   +K++E N  L  SA+  + ++VRAY S SL   ++V  LDL  +A +FG K PP V ++V      K +KR
Sbjct:  174 KGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQSMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDNK--------DTATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNVETLDLPKVAMSFGFKVPPFVDLNVHSSKGVKLHKR 618
[Close]
BLAST of RNA helicase vs. Ensembl Zebrafish
Match: ddx10 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-071022-2])

HSP 1 Score: 315.464 bits (807), Expect = 2.496e-97
Identity = 181/493 (36.71%), Postives = 274/493 (55.58%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV--MISVSGKSNPKSNKRKKQVGMNSDDD 1578
            K L +    + T IQ + I   L+ +DV+GAAKTGSGKTLAFL+P++  +    +    G  A+I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E++ +     I++ TPGRLL H++ T  F    L  L++DEADR+++ GF + + AIV  LPK RQT+LFSAT                             V  LA LS+K+   +    + K          +T + L Q YVVC+   +  +LY+F++ + +KKI+VF + C EV+Y + +F  +   + VLALHGKQ Q KR++ +  F    +A++F TD+AARGLD P V+WVLQ+D P+D   YIHRVGRTAR    G+AL+ L P EE   +S L + KVP+ + + +  K++ +Q+  E  +      +  A+  F +++R+ Y   +   FDV +L L   A + GL   P V  ++    +    +       G  S+D+
Sbjct:   83 KGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDESEKIHR-TNIIICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSAT-------------------------QTRSVKDLARLSLKDPEYVWVHEQAKF---------STPATLEQNYVVCELHQKVNMLYSFLRSHLQKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEKGMISQLQEKKVPINKIQVNPEKLMSVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAPRVRFLLKAQQQRRTAAQDDSSTAGHQSEDE 540
[Close]
BLAST of RNA helicase vs. Ensembl Zebrafish
Match: ddx55 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:NCBI gene;Acc:286745])

HSP 1 Score: 260.381 bits (664), Expect = 4.793e-79
Identity = 174/485 (35.88%), Postives = 257/485 (52.99%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEVL-RKLVAHTELRTGLLIGGNNRQVEAKYLQ-EGVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEF--DESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            + LK++    MTP+Q  CIP  + NKDV   A TGSGKTLAF++P +  +L    +  +    A+I++PTREL++Q  EV+ R L    +    LLIGG+N   + + L+ +G  I++ATPGRL D        L        L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT      K                       L  A L    N + I + ++ + A+ V     T ++LS  Y +C+  ++F  L  F+++++ +K +VF STC  V+YF +   ++  NV +  +HGK    KR K F  F   ++ I+ CTDV ARG+DIP V+WVLQYDPP     ++HR GRTAR GN G AL+FL P E  +++ L+ N K P+  F    D   +LP     + +   + A+       F ++V+AY     S  F +  LD AALA+ F L   P  M  + GK+ P
Sbjct:   22 QTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLKKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQELEK-----------------------LVRAGL---RNPVRITVKEKGVAASSV---QKTPAKLSNYYTMCRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGKMKH-KRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEESYVNFLSINQKCPLQSFSSVKDVVDVLP---KLKAMALGDRAMFEKGMRAFVSYVQAYAKHECSLIFRIKDLDFAALARGFALVRLPK-MPELRGKTFP 472
[Close]
BLAST of RNA helicase vs. Ensembl Zebrafish
Match: ddx31 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973])

HSP 1 Score: 263.848 bits (673), Expect = 5.428e-79
Identity = 175/535 (32.71%), Postives = 282/535 (52.71%), Query Frame = 1 
Query:  127 KDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVN--KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKK---RQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKE--NCMLIDMSKEKLEANVVGG-----DNATVSQLSQGYVVCKPSD-RFRLLYTFI----KKNQKKKIMVFMSTCLEVKYFYELFNII--NVP------------VLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEF---------DE----------------------SKMLPIQESYEKIVE-SNSALQHSAKSGFTTFVRAYCSFSLS---CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            K +N+  MT +Q + IP L+  KD +  ++TGSGKTLA+ +P+V   + +    +   G  A+++ PTREL++Q+F++ +KL+   T +  G+L+GG  ++ E   L++G+ +L++TPGRL+DH+ NT    F  ++ LI+DEADR+++ GF +++T I+  L      RQ VL SAT+    ++                         LA +SMK+  +  + + S+E +EA          D+  V +  Q +VV  PS      L  FI    K  Q++K+++F+S+C  V++   LF  +   +P               LHG   Q +R + F++F++ +  I+ CTDVAARGLD+P V W++QY+PP    EY+HRVGRTAR G  G +L+FL P ET F+ +LA + + ++E +          DE                       +   +Q  +E  V  SN +LQ +AKS    F+RAY ++  S    F +  L L   AK+FGL++ P  + S S  +NP
Sbjct:  171 KVLNVSSMTSVQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRELALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNALNAAGPDRQNVLLSATITEGLSR-------------------------LASISMKDPVSVHVSEGSEETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILAKCKFEQRQKLIIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERTEVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTARIGAQGSSLLFLTPSETAFVDVLANHNISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEVRERATLLQTDFENYVHASNESLQ-TAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKSFGLRDAPQGLAS-SISTNP 678
[Close]
BLAST of RNA helicase vs. Ensembl Zebrafish
Match: BX510918.1 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:NCBI gene;Acc:325248])

HSP 1 Score: 245.743 bits (626), Expect = 2.189e-72
Identity = 170/533 (31.89%), Postives = 276/533 (51.78%), Query Frame = 1 
Query:  127 KDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKK---RQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKE--NCMLIDMSKEKLEANVVGG-----DNATVSQLSQGYVVCKPSD-RFRLLYTFI----KKNQKKKIMVFMSTCLEVKYFYELFNII--NVP------------VLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEF---------DE----------------------SKMLPIQESYEKIVE-SNSALQHSAKSGFTTFVRAYCSFSLS---CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            K +N+  MT +Q + IP L+  KD +  ++TGSGKTLA+ +P+V  +     +P+   +        +L++Q+F++ +KL+   T +  G+L+GG  ++ E   L++G+ +L++TPGRL+DH+ NT    F  ++ LI+DEADR+++ GF +++T I+  L      RQ VL SAT+    ++                         LA +SMK+  +  + + S+E +EA          D+  V +  Q +VV  PS      L  FI    K  Q++K+++F+S+C  V++   LF  +   +P               LHG   Q +R + F++F++ +  I+ CTDVAARGLD+P V W++QY+PP    EY+HRVGRTAR G  G +L+FL P ET F+ +LA + + ++E +          DE                       +   +Q  +E  V  SN +LQ +AKS    F+RAY ++  S    F +  L L   AK+FGL++ P  + S S  +NP
Sbjct:  171 KVLNVSSMTSVQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFL--QAIQPKVKAS--------QLALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNALNTAGPYRQNVLLSATITEGLSR-------------------------LASISMKDPVSVHVSEGSEETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILAKCKFEQRQKLVIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERTEVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTARIGAQGSSLLFLTPSETAFVDVLANHNISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEVRERATLLQTDFENYVHASNESLQ-TAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKSFGLRDAPQGLAS-SISTNP 666
[Close]
BLAST of RNA helicase vs. Ensembl Xenopus
Match: pard3b (par-3 family cell polarity regulator beta [Source:Xenbase;Acc:XB-GENE-5816818])

HSP 1 Score: 324.324 bits (830), Expect = 1.182e-102
Identity = 187/480 (38.96%), Postives = 267/480 (55.62%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDD 1578
            T IQ + I   L+ KDV+GAAKTGSGKTLAF++P +  +    +    G   +I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     IL+ TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AIV  LPKKRQT+LFSAT                           + V  LA LS+K+   +      K          +T + L Q YVVC+   +  LLY+FI+ + KKK +VF S+C EV+Y +  F  +   +PVL LHGKQ Q KR++ +  F   ++A++F TD+AARGLD P V+WVLQ D P+D   YIHRVGRTAR    G+AL+ L P E       L + KVP+ E + +  K++ +Q   E  +     L+ +A+  F +++R+ Y   +   FDV KL L   A++ GL   P V   +  ++   ++  K   G  SD +
Sbjct:   97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHENAKF---------STPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQLEEKKVPINEIKINPEKLMDVQGRLEAFLAQEQDLKETAQRCFVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRVRFLLKAQNAQSTSVSKDDPGTASDQE 541
[Close]
BLAST of RNA helicase vs. Ensembl Xenopus
Match: pard3b (par-3 family cell polarity regulator beta [Source:Xenbase;Acc:XB-GENE-5816818])

HSP 1 Score: 324.324 bits (830), Expect = 2.978e-102
Identity = 187/480 (38.96%), Postives = 267/480 (55.62%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDD 1578
            T IQ + I   L+ KDV+GAAKTGSGKTLAF++P +  +    +    G   +I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     IL+ TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AIV  LPKKRQT+LFSAT                           + V  LA LS+K+   +      K          +T + L Q YVVC+   +  LLY+FI+ + KKK +VF S+C EV+Y +  F  +   +PVL LHGKQ Q KR++ +  F   ++A++F TD+AARGLD P V+WVLQ D P+D   YIHRVGRTAR    G+AL+ L P E       L + KVP+ E + +  K++ +Q   E  +     L+ +A+  F +++R+ Y   +   FDV KL L   A++ GL   P V   +  ++   ++  K   G  SD +
Sbjct:    8 TTIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHENAKF---------STPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQLEEKKVPINEIKINPEKLMDVQGRLEAFLAQEQDLKETAQRCFVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRVRFLLKAQNAQSTSVSKDDPGTASDQE 452
[Close]
BLAST of RNA helicase vs. Ensembl Xenopus
Match: pard3b (par-3 family cell polarity regulator beta [Source:Xenbase;Acc:XB-GENE-5816818])

HSP 1 Score: 323.939 bits (829), Expect = 7.769e-101
Identity = 187/480 (38.96%), Postives = 267/480 (55.62%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDD 1578
            T IQ + I   L+ KDV+GAAKTGSGKTLAF++P +  +    +    G   +I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     IL+ TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AIV  LPKKRQT+LFSAT                           + V  LA LS+K+   +      K          +T + L Q YVVC+   +  LLY+FI+ + KKK +VF S+C EV+Y +  F  +   +PVL LHGKQ Q KR++ +  F   ++A++F TD+AARGLD P V+WVLQ D P+D   YIHRVGRTAR    G+AL+ L P E       L + KVP+ E + +  K++ +Q   E  +     L+ +A+  F +++R+ Y   +   FDV KL L   A++ GL   P V   +  ++   ++  K   G  SD +
Sbjct:   92 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHENAKF---------STPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQLEEKKVPINEIKINPEKLMDVQGRLEAFLAQEQDLKETAQRCFVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRVRFLLKAQNAQSTSVSKDDPGTASDQE 536
[Close]
BLAST of RNA helicase vs. Ensembl Xenopus
Match: pard3b (par-3 family cell polarity regulator beta [Source:Xenbase;Acc:XB-GENE-5816818])

HSP 1 Score: 323.553 bits (828), Expect = 2.049e-100
Identity = 187/480 (38.96%), Postives = 267/480 (55.62%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDD 1578
            T IQ + I   L+ KDV+GAAKTGSGKTLAF++P +  +    +    G   +I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     IL+ TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AIV  LPKKRQT+LFSAT                           + V  LA LS+K+   +      K          +T + L Q YVVC+   +  LLY+FI+ + KKK +VF S+C EV+Y +  F  +   +PVL LHGKQ Q KR++ +  F   ++A++F TD+AARGLD P V+WVLQ D P+D   YIHRVGRTAR    G+AL+ L P E       L + KVP+ E + +  K++ +Q   E  +     L+ +A+  F +++R+ Y   +   FDV KL L   A++ GL   P V   +  ++   ++  K   G  SD +
Sbjct:   97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHENAKF---------STPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQLEEKKVPINEIKINPEKLMDVQGRLEAFLAQEQDLKETAQRCFVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRVRFLLKAQNAQSTSVSKDDPGTASDQE 541
[Close]
BLAST of RNA helicase vs. Ensembl Xenopus
Match: pard3b (par-3 family cell polarity regulator beta [Source:Xenbase;Acc:XB-GENE-5816818])

HSP 1 Score: 305.064 bits (780), Expect = 6.245e-95
Identity = 175/438 (39.95%), Postives = 247/438 (56.39%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSF-SLSCFDVHKLD 1452
            T IQ + I   L+ KDV+GAAKTGSGKTLAF++P +  +    +    G   +I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     IL+ TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AIV  LPKKRQT+LFSAT                           + V  LA LS+K+   +      K          +T + L Q YVVC+   +  LLY+FI+ + KKK +VF S+C EV+Y +  F  +   +PVL LHGKQ Q KR++ +  F   ++A++F TD+AARGLD P V+WVLQ D P+D   YIHRVGRTAR    G+AL+ L P E       L + KVP+ E + +  K++ +Q   E  +     L+ +A+  F +++    S   +S   V+ LD
Sbjct:   97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHENAKF---------STPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQLEEKKVPINEIKINPEKLMDVQGRLEAFLAQEQDLKETAQRCFVSYLLGIHSLVEISSVCVYWLD 499
[Close]
BLAST of RNA helicase vs. Ensembl Mouse
Match: Ddx18 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:MGI Symbol;Acc:MGI:1914192])

HSP 1 Score: 451.44 bits (1160), Expect = 5.633e-152
Identity = 230/468 (49.15%), Postives = 313/468 (66.88%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVS 1515
            KA+++M   +MT IQ + I  LLE +D++ AAKTGSGKTLAFL+P++  ++   F PR+GT  +I+SPTREL++QTF VL++L+ H     GL++GG+NR  E + L  G+ I+VATPGRLLDH+ NT  F++  LQ L+IDEADR+++ GF EE+  I++ LP +RQT+LFSAT                            KV  LA +S+K+  + + +  +K        + ATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VKY YEL N I++PVLA+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L ++KVP+ +F+F  SK+  IQ   EK++E N  L  SA+  + +++RAY S SL   F+V+ L+L  +A +FG K PP V ++VS
Sbjct:  182 KAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDDK--------EVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVS 616
[Close]
BLAST of RNA helicase vs. Ensembl Mouse
Match: Ddx10 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:MGI Symbol;Acc:MGI:1924841])

HSP 1 Score: 321.242 bits (822), Expect = 2.086e-99
Identity = 180/465 (38.71%), Postives = 269/465 (57.85%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            K L++     +T IQ + I   L+ KDV+GAAKTGSGKTLAFLVP++  +    +    G   +I+SPTREL+ QTFEVLRK+  + +   GL+IGG + + EA+ +   + ILV TPGRLL H++ T  F    LQ L++DEADR+++ GF + M AI+  LPKKRQT+LFSAT                           + V  LA LS+K+   +    K K          +T + L Q Y++C+   +  +L++F++ + KKK +VF S+C EV+Y Y +F  +   + +LALHG+Q Q +R++ + +F    AA++F TD+AARGLD P V+WVLQ+D P+D   YIHR GRTAR    G+AL+ L P EE   +  L + KVPV E + +  K++ +Q+  E  +  +  L+  A+  F +++R+ Y       F+V KL +   A + GL   P +
Sbjct:   82 KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHEKAKY---------STPATLEQNYIICELHQKISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFNVSKLPITEYALSLGLAVAPRI 511
[Close]
BLAST of RNA helicase vs. Ensembl Mouse
Match: Ddx31 (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Source:MGI Symbol;Acc:MGI:2682639])

HSP 1 Score: 265.003 bits (676), Expect = 7.803e-80
Identity = 175/544 (32.17%), Postives = 279/544 (51.29%), Query Frame = 1 
Query:  133 MNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVN--KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLP---KKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFI------KKNQKKKIMVFMSTCLEVKYFYELF-----------NIINVP-------VLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDE------------------------------SKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFS---LSCFDVHKLDLAALAKTFGLKEPPHVMISVSG-------KSNPKSNKRKKQ 1554
            + M  MT +Q + IP LLE +D +  ++TGSGKTLA+ VP+V   + L S  +   G  A+++ PTREL++Q+F+ ++KL+   T +  G+L+GG  R+ E   L++G+ IL++TPGRL+DH+ +TK   F+R++ LI+DEADR+++ GF +++T I+  +    +KRQ VL SATL     +L                        ++   + +NC   +    K  A++     A    L Q  V+     R   L  FI      +KNQ  K++VF S+C  V++ Y LF              ++P        L LHG   Q +R   F +F+ +E  ++ CTDVA+RGLD+P V W++QY  P  P EYIHR+GRTAR G  G +L+ L P E ++++ LA +K+ V E + ++                               +   +Q  +E  V S+  +   AK    +F+RAY ++     S F V  L L  +AK+FGL++ P   +SVS        + +P+   ++KQ
Sbjct:  122 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLVDISLHN----------------PVSISVLDKNC---NQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKFEKNQ--KMIVFFSSCELVEFHYSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHVAKSFGLRDAPR-NLSVSAVKKASLKRPHPRRKTQRKQ 643
[Close]
BLAST of RNA helicase vs. Ensembl Mouse
Match: Ddx55 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:MGI Symbol;Acc:MGI:1915098])

HSP 1 Score: 258.07 bits (658), Expect = 4.716e-78
Identity = 172/485 (35.46%), Postives = 256/485 (52.78%), Query Frame = 1 
Query:  121 ALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEVLRKLVAH-TELRTGLLIGGNN--RQVEAKYLQEGVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEFDES--KMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            AL+++    MTP+Q   IP  ++NKDV   A TGSGKTLAF++P++  +L    +  ++   AI+++PTREL++Q  EVL     H  +    L IGG N    VE ++ Q G  I+VATPGRL D        L        L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT                           ++V  L    ++ N + I + ++ + A+       T S+L   Y++CK  ++F  L  F++  Q++K +VF STC  V+Y+ +    +   V +L +HGK    KR K F +F + ++ I+ CTDV ARG+DIP V+WVLQYDPP +   ++HR GRTAR G+ G AL+FL P E  +++ LA N K P+ E     +   +LP       +  ++ A+       F +FV+AY     S  F +  LD A LA+ F L   P  M  + GK  P
Sbjct:   23 ALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVE-RFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT-------------------------QTQEVENLVRAGLR-NPVRISVKEKGVAAS---STQKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP---KLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPR-MPELRGKQFP 472
[Close]
BLAST of RNA helicase vs. Ensembl Mouse
Match: Ddx55 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:MGI Symbol;Acc:MGI:1915098])

HSP 1 Score: 256.144 bits (653), Expect = 2.334e-77
Identity = 169/482 (35.06%), Postives = 256/482 (53.11%), Query Frame = 1 
Query:  121 ALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEVLRKLVAH-TELRTGLLIGGNN--RQVEAKYLQEGVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            AL+++    MTP+Q   IP  ++NKDV   A TGSGKTLAF++P++  +L    +  ++   AI+++PTREL++Q  EVL     H  +    L IGG N    VE ++ Q G  I+VATPGRL D        L        L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT                           ++V  L    ++ N + I + ++ + A+       T S+L   Y++CK  ++F  L  F++  Q++K +VF STC  V+Y+ +    +   V +L +HGK    KR K F +F + ++ I+ CTDV ARG+DIP V+WVLQYDPP +   ++HR GRTAR G+ G AL+FL P E  +++ LA N+  ++  + +   +LP       +  ++ A+       F +FV+AY     S  F +  LD A LA+ F L   P  M  + GK  P
Sbjct:   23 ALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVE-RFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT-------------------------QTQEVENLVRAGLR-NPVRISVKEKGVAASST---QKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKEMS-LQRNTIDLLP---KLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPR-MPELRGKQFP 468
[Close]
BLAST of RNA helicase vs. UniProt/SwissProt
Match: sp|Q9VD51|DDX18_DROME (Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster OX=7227 GN=pit PE=2 SV=2)

HSP 1 Score: 457.218 bits (1175), Expect = 4.438e-153
Identity = 234/478 (48.95%), Postives = 312/478 (65.27%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTAR-AGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            +A+K+M   +MT IQ + +  LL+ +D++GAA+TGSGKTLAFL+P V  +    F PR+GT  II+SPTRELS+QTF VL++L+AH     GL++GG+NRQVE++ L +G+ ILVATPGRLLDHL N+  FL+  LQ LIIDE DR++E GF EE+  I+  LPK+RQT+LFSAT                            ++  L+ L++K   + + +   +        D ATV  L QGY+VC    R  +L+TF+KKN+KKK+MVF S+C+ VKY +ELFN I++PV ++HGKQ Q KR   F +F   E+ I+ CTDVAARGLDIP VDW++QYDPPDDP+EYIHRVGRTAR +G +G AL+ +RPEE  FL  L   KVP+ EFEF   K+  IQ   EK++  N  L  SAK  F ++VRAY S  L   F+V+ LDL A+AK+FG   PP V + V      +  KR
Sbjct:  200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSAT-------------------------QTARIEALSKLALKSEPIYVGVHDNQ--------DTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKR 644
[Close]
BLAST of RNA helicase vs. UniProt/SwissProt
Match: sp|Q9NVP1|DDX18_HUMAN (ATP-dependent RNA helicase DDX18 OS=Homo sapiens OX=9606 GN=DDX18 PE=1 SV=2)

HSP 1 Score: 456.447 bits (1173), Expect = 6.620e-153
Identity = 233/468 (49.79%), Postives = 312/468 (66.67%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVS 1515
            KA+K+M    MT IQ + I  LLE +D++ AAKTGSGKTLAFL+P V  ++   F PR+GT  +I+SPTREL++QTF VL++L+ H     GL++GG+NR  EA+ L  G+ I+VATPGRLLDH+ NT  F++  LQ L+IDEADR+++ GF EE+  I++ LP +RQT+LFSAT                            KV  LA +S+K+  + + +  +K         NATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VKY YEL N I++PVLA+HGKQ Q KR   F +F   ++  + CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L ++KVP++EF+F  SK+  IQ   EK++E N  L  SA+  + +++RAY S SL   F+V+ L+L  +A +FG K PP V ++V+
Sbjct:  192 KAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDDKA--------NATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVN 626
[Close]
BLAST of RNA helicase vs. UniProt/SwissProt
Match: sp|Q54S03|DDX18_DICDI (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 GN=ddx18 PE=3 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 2.668e-152
Identity = 240/492 (48.78%), Postives = 321/492 (65.24%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARA-GNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSG--------KSNPKSNKRKKQVG 1560
            KK++++M   KMTPIQ + I  LLE KD++GAA+TGSGKTLAFL+P +  ++ SNF+PR+GT  II+SPTREL++Q + V R+L+ +     G++IGG +++ E + L++GV +LVATPGRLLDHL NTK F+   L+ LIIDEADR++E GF EEM  I++K+PK RQT+LFSAT                            KV  +A +S+  + + + +  E+        + +TV  L QGYVVC    RF LLYTF+KKN  KKI+VF+S+C  VKY  EL N I++PVL LHG+Q Q KR   F +F   E  I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  G  G+AL+FL P+E  FL  L   KVP+ E+EF +SK+  +Q+  EK+V  N  L +SA+  +  ++ AY S SL   FDV+ LDL  +AK FG  +PP V ++V+         KSN KS   +KQ G
Sbjct:  131 KKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKYHTQTHGIVIGGASKKPEEERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTRQTMLFSAT-------------------------QTRKVDDIAKVSLNNSPVYVGVDDER--------EISTVEGLEQGYVVCPSERRFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRALLFLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLYNSARDAYKAYICAYASHSLKDIFDVNALDLQCVAKAFGFLDPPKVNLNVNSSGKADFQKKSNNKSGFAQKQYG 589
[Close]
BLAST of RNA helicase vs. UniProt/SwissProt
Match: sp|Q4P6N0|HAS1_USTMA (ATP-dependent RNA helicase HAS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=HAS1 PE=3 SV=2)

HSP 1 Score: 449.899 bits (1156), Expect = 1.105e-151
Identity = 230/469 (49.04%), Postives = 309/469 (65.88%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPK-KRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVS 1515
            +KA+  M    MT +Q RCIP L+  KDV+GAA+TGSGKTL+FL+P +  +    F+PR+GT AII+SPTREL++Q F V ++L+AH     G+++GG NR+ EA  LQ+GV ++VATPGRLLDHL NTK F+F  L+ L IDEADR++E GF +EM  IV+ LP   RQ++LFSAT                            KV  LA +S++   + I++  + L A       +TVS+L QGYVVC+   RF LL+TF+KKN  KKI+VFMS+C  VKY  +L N I+VPVL LHGKQ Q KR   F ++       + CTDVAARGLDIP VDW++Q+DPPDDP++YIHRVGRTARAGN+G++L+FL P E  FL  L   KVP+ E+ F   K+  +Q   EK++  N  L  SA+ G+ ++++AY S+SL   FD+HKLDLA +AK +G   PP V I++ 
Sbjct:   62 RKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANRRAEADKLQKGVNLIVATPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQSMLFSAT-------------------------QTTKVQDLARISLRPGPLYINVHAD-LAA-------STVSRLEQGYVVCESDRRFLLLFTFLKKNAGKKIIVFMSSCNSVKYHSDLLNFIDVPVLDLHGKQKQQKRTNTFFEYCNAPCGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNSGKSLLFLLPTELGFLRFLKVAKVPLNEYTFPSDKVANVQGQLEKLISKNYYLHQSARDGYRSYLQAYGSYSLKRIFDIHKLDLAKVAKAYGFSVPPKVNITIG 497
[Close]
BLAST of RNA helicase vs. UniProt/SwissProt
Match: sp|Q6FIL3|HAS1_CANGA (ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=HAS1 PE=3 SV=1)

HSP 1 Score: 446.432 bits (1147), Expect = 1.968e-151
Identity = 230/482 (47.72%), Postives = 320/482 (66.39%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKK-RQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISV--SGKSNPKSNKRK 1548
            +A++ M   KMTP+Q R IP L+  +DV+GAAKTGSGKTLAFL+P +  + +  F+PR+GT  II++PTREL++Q F V+R+L+       G++IGG NR+ EA+ L +GV +LVATPGRLLDHL NTK F+F  L+ L+IDEADR++E GF +EM  I++ LP + RQ++LFSAT                            KV  L+ +S++   + I++  E         D++T   L QGYVVC+   RF LL++F+K+NQKKKI+VF+S+C  VKY+ EL N I++PVL LHGKQ Q KR   F +F   E  I+ CTDVAARGLDIP VDW++Q+DPPDDP++YIHRVGRTAR  N  G++L+FL P E  FL  L   KVP+ E+EF  +K+  +Q   EK+++SN  L  +AK G+ ++++AY S SL + + + KLDLA +AK++G   PP V I++  SGK+     KRK
Sbjct:   42 RAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSAT-------------------------QTTKVEDLSRISLRPGPLFINVVSEH--------DSSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTNGKGKSLMFLIPNELGFLRYLKAAKVPLNEYEFPTNKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITIGASGKTPTVVKKRK 490
[Close]
BLAST of RNA helicase vs. TrEMBL
Match: A0A183SK01 (RNA helicase OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4549 PE=3 SV=1)

HSP 1 Score: 524.628 bits (1350), Expect = 4.004e-179
Identity = 262/480 (54.58%), Postives = 340/480 (70.83%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISV--SGKSNPKSNKRK 1548
            KKAL DMN+  MT IQ +CIPHLL+ +DVM +AKTGSGKTLAFL+P+V+ +LN   + R+GT AII+SPTRELS+QT+ VL++L AHT+LR GL++GG+NRQ EAK LQ+GVTILVATPGRLLDHL NT+ FL H L+TL+IDEADRL++ GF  EM  I+R LPK RQ++LFSATL   +                           LA  ++K NC++I +++         G  ATV  L QGYV+C P+ +F LLYTF+K+N+ KK+MVFMS+C+EVK++YEL N I++PV A+HG+Q Q KR   F  F +  ++I+ CTDV ARGLDIP VDW++QYDPPDDPK+YIHRVGRTARAG +G AL+ LRP E   L +L +++V + EFE  ++KM  +Q + EK++ESN  L  SA+  F   VRAY S  L C DV++LDLAALAKT GL+  P V + V  S K +PK  KRK
Sbjct:   67 KKALVDMNLTDMTEIQKQCIPHLLQGRDVMASAKTGSGKTLAFLIPVVDLMLNVGMQNRNGTGAIIISPTRELSLQTYSVLKELTAHTQLRIGLIMGGSNRQAEAKNLQKGVTILVATPGRLLDHLTNTEDFLRHNLKTLVIDEADRLLDIGFELEMQQIIRLLPKNRQSLLFSATLNHRTH-------------------------NLAKSALKTNCIMIGVNE---------GPEATVETLEQGYVICNPATKFSLLYTFLKRNKSKKVMVFMSSCMEVKFYYELLNFIDLPVQAIHGRQKQAKRTSTFLNFIKATSSILLCTDVGARGLDIPEVDWIVQYDPPDDPKDYIHRVGRTARAGKSGNALLILRPHELGLLDVLRESRVKMIEFEVAKNKMADVQSALEKLIESNYFLATSAQEAFKGIVRAYNSSKLRCLDVNQLDLAALAKTCGLQIVPRVDLGVEPSRKLDPKRMKRK 512
[Close]
BLAST of RNA helicase vs. TrEMBL
Match: A0A0X3NMD3 (RNA helicase (Fragment) OS=Schistocephalus solidus OX=70667 GN=DDX18 PE=3 SV=1)

HSP 1 Score: 524.242 bits (1349), Expect = 1.910e-178
Identity = 262/480 (54.58%), Postives = 340/480 (70.83%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISV--SGKSNPKSNKRK 1548
            KKAL DMN+  MT IQ +CIPHLL+ +DVM +AKTGSGKTLAFL+P+V+ +LN   + R+GT AII+SPTRELS+QT+ VL++L AHT+LR GL++GG+NRQ EAK LQ+GVTILVATPGRLLDHL NT+ FL H L+TL+IDEADRL++ GF  EM  I+R LPK RQ++LFSATL   +                           LA  ++K NC++I +++         G  ATV  L QGYV+C P+ +F LLYTF+K+N+ KK+MVFMS+C+EVK++YEL N I++PV A+HG+Q Q KR   F  F +  ++I+ CTDV ARGLDIP VDW++QYDPPDDPK+YIHRVGRTARAG +G AL+ LRP E   L +L +++V + EFE  ++KM  +Q + EK++ESN  L  SA+  F   VRAY S  L C DV++LDLAALAKT GL+  P V + V  S K +PK  KRK
Sbjct:  100 KKALVDMNLTDMTEIQKQCIPHLLQGRDVMASAKTGSGKTLAFLIPVVDLMLNVGMQNRNGTGAIIISPTRELSLQTYSVLKELTAHTQLRIGLIMGGSNRQAEAKNLQKGVTILVATPGRLLDHLTNTEDFLRHNLKTLVIDEADRLLDIGFELEMQQIIRLLPKNRQSLLFSATLNHRTH-------------------------NLAKSALKTNCIMIGVNE---------GPEATVETLEQGYVICNPATKFSLLYTFLKRNKSKKVMVFMSSCMEVKFYYELLNFIDLPVQAIHGRQKQAKRTSTFLNFIKATSSILLCTDVGARGLDIPEVDWIVQYDPPDDPKDYIHRVGRTARAGKSGNALLILRPHELGLLDVLRESRVKMIEFEVAKNKMADVQSALEKLIESNYFLATSAQEAFKGIVRAYNSSKLRCLDVNQLDLAALAKTCGLQIVPRVDLGVEPSRKLDPKRMKRK 545
[Close]
BLAST of RNA helicase vs. TrEMBL
Match: A0A0F6MV67 (RNA helicase OS=Spirometra erinaceieuropaei OX=99802 PE=2 SV=1)

HSP 1 Score: 518.079 bits (1333), Expect = 1.284e-176
Identity = 261/480 (54.37%), Postives = 337/480 (70.21%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISV--SGKSNPKSNKRK 1548
            KKAL DM++  MT IQ +CIPHLLE +DVM +AKTGSGKTLAFL+P+V+ +L    + R+GT AII+SPTRELS+QT+ VL++L AHT+LR GL++GG+NRQ EAK LQ+GVTILVA PGRLLDHL NT+ FL H L+TL+IDEADRL++ GF  EM  IVR LPK RQ++LFSATL   +                           LA  ++K NC+++ +++         G  ATV  L QGYV+C P+ +F LLYTF+K+N+ KK+MVFMS+C+EVK +YEL N I++PV A+HG+Q Q KR   F  F +  ++I+ CTDV ARGLDIP VDW++QYDPPDDPK+YIHRVGRTARAG +G AL+ LRP E   L +L +++V + EFE  ++KM  +Q + EK++ESN  L  SA+  F   VRAY S  L C DV++LDLAALAKT GLK  P V + V  S K +PK  KRK
Sbjct:   59 KKALVDMDLTDMTEIQKQCIPHLLEGRDVMASAKTGSGKTLAFLIPVVDLMLKVGMQNRNGTGAIIISPTRELSLQTYSVLKELTAHTQLRIGLIMGGSNRQAEAKNLQKGVTILVAPPGRLLDHLTNTEDFLRHNLKTLVIDEADRLLDIGFELEMQQIVRLLPKDRQSLLFSATLNQRTH-------------------------NLAKSALKTNCIMVGVNE---------GPEATVETLEQGYVICNPATKFSLLYTFLKRNKNKKVMVFMSSCMEVKLYYELLNFIDLPVQAIHGRQKQAKRTSTFLNFIKATSSILLCTDVGARGLDIPEVDWIVQYDPPDDPKDYIHRVGRTARAGKSGNALLILRPHELGLLDVLRESRVKMVEFEVAKNKMADVQAALEKLIESNYFLATSAQEAFKGIVRAYNSSKLRCLDVNQLDLAALAKTCGLKIVPKVDLGVDPSRKLDPKRMKRK 504
[Close]
BLAST of RNA helicase vs. TrEMBL
Match: A0A4Z2DDH3 (RNA helicase OS=Schistosoma japonicum OX=6182 GN=EWB00_002142 PE=3 SV=1)

HSP 1 Score: 513.457 bits (1321), Expect = 8.340e-175
Identity = 260/486 (53.50%), Postives = 334/486 (68.72%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPK--SNKRKKQVGMN 1566
            K+A+KDM    MT IQ +CIP LLE++D+M  AKTGSGKTLAFL+P+V  +L+   +PR+GT AII+SPTRELS+QT+ VL +L+  T LR GL++GG+NRQ EA+ L++GVTILVATPGRLLDHL NTKFFL H L+ L+IDEADRL++ GF  EM  I++ LP  RQT+LFSATL   +                           LA  ++K +C+++           V  + ATV  L QGYVVC PS RF LLYTFI+KN+ KKIMVFM++C+EVK++YEL N ++ PVLA+HG+Q Q KR   F +F + EAA++ CTDV ARGLDIP VDW+LQYDPPDD KEYIHRVGRTARAG+ G AL+ LRP E +FLS+L K +V V E+E   SKM  +Q + EK+V +N  L  SA   F   VRAY S  LSCF+V++LDLAA A+T GL   P V ++V  K   +   +KR K  G++
Sbjct:   62 KRAIKDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVELMLSLGLQPRNGTGAIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQNLEKGVTILVATPGRLLDHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQTMLFSATLNEKTK-------------------------NLANAALKASCVMV---------GSVPDNEATVEGLEQGYVVCSPSKRFCLLYTFIRKNKSKKIMVFMASCMEVKFYYELLNFVDTPVLAIHGRQKQAKRTSTFLQFIKAEAAVLLCTDVGARGLDIPKVDWILQYDPPDDAKEYIHRVGRTARAGSTGNALLVLRPHELEFLSILRKARVKVVEYEIANSKMADVQPALEKLVTNNYFLSLSAHEAFKGIVRAYASSCLSCFNVNELDLAATARTCGLSTTPKVDLNVKPKRTREIPGHKRYKPFGVS 513
[Close]
BLAST of RNA helicase vs. TrEMBL
Match: G4V5G3 (RNA helicase OS=Schistosoma mansoni OX=6183 GN=Smp_094020 PE=3 SV=1)

HSP 1 Score: 512.686 bits (1319), Expect = 1.585e-174
Identity = 273/520 (52.50%), Postives = 355/520 (68.27%), Query Frame = 1 
Query:   16 DFSLINMSEDNIIPGCQXXXXXXXXXXXXXXXXKKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGK---SNPKSNKRKKQVGMN 1566
            D +L N+ E    PG  I ++  FE+L I+E IK+A+K+M    MT IQG+CIP LLE++D+M  AKTGSGKTLAFL+P+V  +LN   +PR+GT AII+SPTRELS+QT+ VL +L+  T LR GL++GG+NRQ EA+ L++GVTILVATPGRLLDHL+NTKFFL H L+ L+IDEADRL++ GF  EM  I++ LP  RQT+LFSATL   +                           LA  ++K +C+++  + +           ATV  L QGYVVC P  RF LLYTF+KKN+ KKIMVFM++C+EVK++YEL N ++ PVLA+HG+Q Q KR   F +F + E+A++ CTDV ARGLDIP VDW+LQYDPPDD KEYIHRVGRTARAG+ G AL+ LRP E +FLS+L K +V V E+E   SKM  +Q + EK++++N  L  SA+  F   VRAY S  LSCF+V +LDLAA AKT GL   P V ++V  K    NP   KR K  G++
Sbjct:   31 DAALDNLEESQ--PGTSISLSGKFEDLPISEPIKRAVKEMGFTHMTDIQGKCIPQLLEHRDLMACAKTGSGKTLAFLIPVVELMLNLGLQPRNGTGAIIISPTRELSLQTYGVLGELIQFTNLRIGLIMGGSNRQTEAQNLEKGVTILVATPGRLLDHLSNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQTMLFSATLNEKTK-------------------------NLANAALKASCVMVGSAPDT---------EATVEGLEQGYVVCPPDRRFCLLYTFLKKNKSKKIMVFMASCMEVKFYYELLNFVDTPVLAIHGRQKQAKRTSTFLQFVKAESAVLLCTDVGARGLDIPKVDWILQYDPPDDAKEYIHRVGRTARAGSTGNALLVLRPHELEFLSILRKARVKVVEYEIANSKMADVQPALEKLIKNNYFLALSAQEAFKGIVRAYASSGLSCFNVDELDLAATAKTCGLTITPKVDLNVKSKRTRENP-GQKRYKPFGVS 513
[Close]
BLAST of RNA helicase vs. Ensembl Cavefish
Match: ddx18 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685])

HSP 1 Score: 460.685 bits (1184), Expect = 5.944e-155
Identity = 241/478 (50.42%), Postives = 311/478 (65.06%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            K +K+M    MT IQ + I  LLE +DV+ AAKTGSGKTLAFL+P +  +    F PR+GT  II+SPTREL++QT+ VL+ L+ H     GL++GG+NR  EA+ L  GV ILVATPGRLLDHL NT  F++  LQ LIIDEADR++E GF EE+  I++ LPKKRQT+LFSAT                            KV  LA +S+K+  + + +   K        + ATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VK+ YEL N I++PV+A+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L + KVP++EFEF  SK+  IQ   EK++E N  L  SA+  + ++VRAY S SL   ++V  L+L  +A +FG K PP+V ++V      K  KR
Sbjct:  239 KGIKEMGFENMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPAIELIYKLRFMPRNGTGVIILSPTRELAMQTYGVLKDLMLHHVHTYGLIMGGSNRSAEAQKLGNGVNILVATPGRLLDHLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDNK--------ETATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGIGHALLILRPEELGFLRFLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNVQTLNLPQVALSFGFKVPPYVDLNVHSSKGVKLQKR 683
[Close]
BLAST of RNA helicase vs. Ensembl Cavefish
Match: ENSAMXT00000040066.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000729.1:45111:52135:1 gene:ENSAMXG00000042612.1 transcript:ENSAMXT00000040066.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 397.512 bits (1020), Expect = 7.860e-134
Identity = 205/390 (52.56%), Postives = 259/390 (66.41%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPV 1284
            K +K+M    MT IQ + I  LLE +DV+ AAKTGSGKTLAFL+P +  +    F PR+GT  II+SPTREL++QT+ VL+ L+ H     GL++GG+NR  EA+ L  GV ILVATPGRLLDHL NT  F++  LQ LIIDEADR++E GF EE+  I++ LPKKRQT+LFSAT                            KV  LA +S+K+  + + +   K        + ATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VK+ YEL N I++PV+A+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L + KVP+
Sbjct:   84 KGIKEMGFENMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPAIELIYKLRFMPRNGTGVIILSPTRELAMQTYGVLKDLMLHHVHTYGLIMGGSNRSAEAQKLGNGVNILVATPGRLLDHLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDNK--------ETATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGIGHALLILRPEELGFLRFLKQAKVPL 440
[Close]
BLAST of RNA helicase vs. Ensembl Cavefish
Match: ENSAMXT00000031571.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000729.1:45111:52134:1 gene:ENSAMXG00000042612.1 transcript:ENSAMXT00000031571.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 398.667 bits (1023), Expect = 1.061e-133
Identity = 206/399 (51.63%), Postives = 263/399 (65.91%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESK 1311
            K +K+M    MT IQ + I  LLE +DV+ AAKTGSGKTLAFL+P +  +    F PR+GT  II+SPTREL++QT+ VL+ L+ H     GL++GG+NR  EA+ L  GV ILVATPGRLLDHL NT  F++  LQ LIIDEADR++E GF EE+  I++ LPKKRQT+LFSAT                            KV  LA +S+K+  + + +   K        + ATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VK+ YEL N I++PV+A+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  N  G AL+ LRPEE  FL  L + KVP+   + ++ K
Sbjct:  121 KGIKEMGFENMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPAIELIYKLRFMPRNGTGVIILSPTRELAMQTYGVLKDLMLHHVHTYGLIMGGSNRSAEAQKLGNGVNILVATPGRLLDHLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSAT-------------------------QTRKVEDLARISLKKEPLYVGVDDNK--------ETATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGIGHALLILRPEELGFLRFLKQAKVPLKPLQDNDPK 486
[Close]
BLAST of RNA helicase vs. Ensembl Cavefish
Match: ddx10 (DEAD-box helicase 10 [Source:NCBI gene;Acc:103036294])

HSP 1 Score: 303.138 bits (775), Expect = 3.500e-93
Identity = 172/454 (37.89%), Postives = 257/454 (56.61%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            T IQ + I   L+ KDV+GAAKTGSGKTLAFL+P++  +    +    G  A+I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     I++ TPGRLL H++    F    L  L++DEADR+++ GF + + AIV  LPK RQT+LFSAT                           + V  LA LS+K    +    + K          +T + L Q Y+VC+   +  +L++F++ +  KKI+VF + C EV+Y + +F  +   + VLALHGKQ Q KR++ +  F   +AA++F TD+AARGLD P V+WV+Q+D P+D   YIHRVGRTAR    G+AL+ L P EE    + L + KVP+ + + +  K++ +Q+  E  +      +  A+  F +++R+ Y   +   FDV ++ L   A + GL   P V
Sbjct:   87 TEIQKQTIGFALQGKDVLGAAKTGSGKTLAFLIPVLECLYRHQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDELLKIHR-TNIIICTPGRLLQHMDENSTFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSAT-------------------------QTKSVKDLARLSLKNPEYVWVHEQAKF---------STPATLEQSYMVCELHQKVNMLFSFLRSHLHKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKKAAVLFATDIAARGLDFPAVNWVVQFDCPEDANTYIHRVGRTARYKEGGEALLILLPSEEKGMTTQLQEKKVPINKIQVNPEKLVSVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKDVFDVFQIKLLEYAMSLGLAVAPRV 505
[Close]
BLAST of RNA helicase vs. Ensembl Cavefish
Match: ddx10 (DEAD-box helicase 10 [Source:NCBI gene;Acc:103036294])

HSP 1 Score: 303.523 bits (776), Expect = 1.033e-92
Identity = 172/454 (37.89%), Postives = 257/454 (56.61%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            T IQ + I   L+ KDV+GAAKTGSGKTLAFL+P++  +    +    G  A+I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + E   +     I++ TPGRLL H++    F    L  L++DEADR+++ GF + + AIV  LPK RQT+LFSAT                           + V  LA LS+K    +    + K          +T + L Q Y+VC+   +  +L++F++ +  KKI+VF + C EV+Y + +F  +   + VLALHGKQ Q KR++ +  F   +AA++F TD+AARGLD P V+WV+Q+D P+D   YIHRVGRTAR    G+AL+ L P EE    + L + KVP+ + + +  K++ +Q+  E  +      +  A+  F +++R+ Y   +   FDV ++ L   A + GL   P V
Sbjct:   90 TEIQKQTIGFALQGKDVLGAAKTGSGKTLAFLIPVLECLYRHQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDELLKIHR-TNIIICTPGRLLQHMDENSTFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSAT-------------------------QTKSVKDLARLSLKNPEYVWVHEQAKF---------STPATLEQSYMVCELHQKVNMLFSFLRSHLHKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKKAAVLFATDIAARGLDFPAVNWVVQFDCPEDANTYIHRVGRTARYKEGGEALLILLPSEEKGMTTQLQEKKVPINKIQVNPEKLVSVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKDVFDVFQIKLLEYAMSLGLAVAPRV 508
[Close]
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010109.1 (pep scaffold:Pmarinus_7.0:GL476492:615610:626431:-1 gene:ENSPMAG00000009147.1 transcript:ENSPMAT00000010109.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 396.356 bits (1017), Expect = 1.190e-132
Identity = 199/394 (50.51%), Postives = 263/394 (66.75%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARA-GNAGQALIFLRPEETDFLSLLAKNKVPVTEFE 1296
            KA+ +M    MT IQ + I  LLE +D++ AA+TGSGKTLAFL+P +  +    F PR+GT  +++SPTREL++QT+ VLR+L+ H     GL++GG+NR  EA+ L +G+ ILVATPGRLLDH+ NT  F++  LQ L+IDEADR++E GF EE+  I+R LPKKRQT+LFSAT                            K+  LA +S+K+  + + +   K  A V G +     Q S  YVVC    RF LL+TF+KKN+KKKIMVF S+C+ VK+ YELFN I++PV+ +HGKQ Q KR   F +F   ++  + CTDVAARGLDIP VDW++Q+DPPDDPKEYIHRVGRTAR  G  G AL+ LRPEE  FL  L + +VP++EFE
Sbjct:  190 KAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQNTNTFMYKNLQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSAT-------------------------QTRKIEDLAKISLKKEPLYVGVDDHKETATVDGLEQ----QRSTPYVVCPSEKRFLLLFTFLKKNRKKKIMVFFSSCMSVKFHYELFNYIDLPVMGIHGKQKQTKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGIGGQGHALLILRPEELGFLRYLKQARVPLSEFE 554
[Close]
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Match: ddx55 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:NCBI gene;Acc:286745])

HSP 1 Score: 213.772 bits (543), Expect = 7.566e-63
Identity = 150/433 (34.64%), Postives = 225/433 (51.96%), Query Frame = 1 
Query:  247 VPLVNKVLNSN--FEPRHGTAAIIMSPTRELSVQTFEVLRKLVAH-TELRTGLLIGGNNRQVEA-KYLQEGVTILVATPGRLLDHLNNTKFFLFHR-----LQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTE--FEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHV 1500
            +P++  +L  +  F       AII++PTREL+VQ  EVL + +    +    L IGG+N   +  K+L  G  ++VATPGRL D    +   L  R     L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT                        + E + L  A L    N + I + KE+  A        T ++L   YV+C+   +F  L  F++  +++K +VF STC  V+YF +   ++   V V+++HGK  + +R K F  F    + ++ CTDV ARG+DIP VDWVLQ+DPP     ++HR GRTAR GN G AL+FL P E+ +++ L+ N K P+TE   E D   +LP      +   ++ A+       F + V+AY     S  F +  +DL ALA+ F L   P +
Sbjct:    1 IPIIEMLLRRDGAFREMEEVGAIIITPTRELAVQIDEVLGQFLQRFPQFSHILFIGGSNPMDDVHKFLANGGHVIVATPGRLEDLFKRSDEGLDLRGAVRNLDVLVLDEADRLLDMGFEACLNTILSFLPKQRRTGLFSAT-----------------------QTQELEALVRAGL---RNPVRIAV-KERGAAE--SSTRRTPARLDNFYVICRAEQKFNQLVAFLRARKQEKHLVFFSTCAGVEYFGKALQMLLHGVTVMSIHGKM-KDRRNKIFATFRSLPSGLLVCTDVMARGIDIPEVDWVLQFDPPSSASAFVHRCGRTARIGNHGSALVFLLPMESAYVNFLSINQKCPLTERAIERDVVDVLP---QVRRAARTDRAVYEKGMQAFVSCVQAYAKHECSLIFRIKDMDLGALARGFALLRLPRM 400
[Close]
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Match: DDX54 (DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084])

HSP 1 Score: 206.838 bits (525), Expect = 1.323e-61
Identity = 127/375 (33.87%), Postives = 200/375 (53.33%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANV---VGGDNATVSQLSQGYVVCKPSDR----FRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFL 1254
            TPIQ +CIP +LE +DV+  A+TGSGKT AFLVP+  ++   + +   G  A+++SPTREL++QT +  ++L  HT L+T L++GG+  + +   L E   I++ TPGRL+ H+          ++ ++ DEADRL E GF E++T I+R+LP  RQT+LFSATL                                          L++ ++  L   V   +  D+    QL   ++  +  D+      LL T +K ++  + +VF++T   V+Y  EL +   +    ++    Q +R  N  KF   +  ++  TDVAARG+D P++D V+ Y+ P  PK +IHRVGR ARAG +G A   + P+E  F+
Sbjct:   57 TPIQRKCIPVILEGRDVVAMARTGSGKTAAFLVPMFERLHARSAQA--GARALVLSPTRELALQTSKFTKELGKHTGLKTALILGGDRMEDQFAALHENPDIIIGTPGRLM-HVVVEMNLKLQAMEYVVFDEADRLFEMGFAEQLTEIIRRLPDSRQTLLFSATLPK---------------------------------------QLVEFARAGLSDPVLIRLDVDSKLSDQLKLAFMCSRADDKPCVLLHLLRTVVKPHE--QTVVFVATKHHVEYLRELVSQAGMSCAYIYSALDQTERKINVGKFVHKKTMLLIVTDVAARGID-PMLDNVINYNFPGKPKLFIHRVGRVARAGRSGTAYSLVAPDEMPFV 386
[Close]
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000216.1 (pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-1 gene:ENSPMAG00000000186.1 transcript:ENSPMAT00000000216.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 202.216 bits (513), Expect = 1.341e-59
Identity = 125/371 (33.69%), Postives = 194/371 (52.29%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFL 1230
            +A + +   + T IQ   IP  L+ KD++G A+TGSGKT AF +P++  +L++   P+    A++++PTREL+ Q  E    L +   +++ +++GG +   ++  L +   +++ATPGRL+DHL NTK F    L+ L++DEADR++   F  E+  I++ +PK+R+T LFSAT+     K                       L  A L     C              V     TV +L Q YV      +   L   + +      ++F STC   +    L   +    + LHG+ SQ KRL +  KF     +I+  TDVA+RGLDIP VD V+ +D P   K+YIHRVGRTARAG +G+++ F+
Sbjct:    8 EACEQLGWKQPTKIQVEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLDA---PQR-LFALVLTPTRELAFQISEQFEALGSSIGIKSAVVVGGIDMMSQSLALAKKPHVIIATPGRLVDHLENTKGFNIRALKYLVMDEADRILNMDFETEVDKILKVIPKERKTYLFSATMTKKVQK-----------------------LQRAALKEPVKCS-------------VSTKYQTVEKLQQYYVFIPAKFKDSYLVYILNELAGNSFIIFCSTCNNTQRIALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKGKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFV 338
[Close]
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Match: ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3])

HSP 1 Score: 203.371 bits (516), Expect = 1.373e-59
Identity = 140/415 (33.73%), Postives = 207/415 (49.88%), Query Frame = 1 
Query:  127 KDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQG---FLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLID----MSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKK----KIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVA----ARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEFDESKMLPI 1323
            K M + K TP+Q  CIP +L  +D MG A+TGSGKT AF++P++ K+    F    G   ++++PTREL+ Q  E  R +     L+  +++GG +   +A+ L     +++ATPGRL DHL ++  F   ++Q L++DEADRL+EQG   F +++  I+  LP KRQT+LFSATL  +                               L    N  L +     SKE +          TV +L Q Y++     +   L   I+K Q       I+VF +TC   +    +    N P +ALH    Q +R  +  KF  +   I+  TDVA    ARGLDIP V  VL ++ P  PK YIHRVGRTARAG  G A+  +   +   +  + +     + EF  +E ++L I
Sbjct:   21 KQMGISKPTPVQENCIPPILRGQDCMGCAQTGSGKTAAFVLPILQKLSEDPF----GIFCLVLAPTRELAYQIAEQFRVMGKPLGLKDSVIVGGMDSVRQAQELARKPHVVIATPGRLADHLRSSNTFSLKKIQFLVMDEADRLLEQGATDFTKDLQVIL-ALPAKRQTLLFSATLTDT-------------------------------LQELRNLALTNPFFWESKEPVR---------TVEELDQRYILVADKVKDAYLVHIIQKIQDAHDDWSIIVFTNTCKNCQVLNMMLRHFNFPSVALHSMMRQTERFASLSKFKSSMFKILIATDVASSFWARGLDIPTVQVVLNHNTPSLPKTYIHRVGRTARAGRNGVAITIVTQYDIHLVQAIEETINTKLKEFVTEEKEVLKI 390
[Close]
BLAST of RNA helicase vs. Ensembl Yeast
Match: HAS1 (ATP-dependent RNA helicase; involved in the biogenesis of 40S and 60S ribosome subunits; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000004903])

HSP 1 Score: 446.817 bits (1148), Expect = 3.042e-153
Identity = 228/481 (47.40%), Postives = 315/481 (65.49%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKK-RQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKK 1551
            KA++ M    MT +Q R IP LL  +DV+GAAKTGSGKTLAFL+P +  + +  F+PR+GT  I+++PTREL++Q F V R+L+       G++IGG NR+ EA+ L +GV +L+ATPGRLLDHL NTK F+F  L+ LIIDEADR++E GF +EM  I++ LP + RQ++LFSAT                            KV  LA +S++   + I++  E         DN+T   L QGYVVC    RF LL++F+K+NQKKKI+VF+S+C  VKY+ EL N I++PVL LHGKQ Q KR   F +F   E  I+ CTDVAARGLDIP VDW++Q+DPPDDP++YIHRVGRTAR     G++L+FL P E  FL  L  +KVP+ E+EF E+K+  +Q   EK+++SN  L  +AK G+ ++++AY S SL + + + KLDLA +AK++G   PP V I++       + KR+K
Sbjct:   55 KAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSAT-------------------------QTTKVEDLARISLRPGPLFINVVPET--------DNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKASKVPLNEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITIGASGKTPNTKRRK 502
[Close]
BLAST of RNA helicase vs. Ensembl Yeast
Match: HCA4 (DEAD box RNA helicase; component of the SSU; interacts with Bfr2p and Enp2p; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis [Source:SGD;Acc:S000003570])

HSP 1 Score: 274.633 bits (701), Expect = 8.283e-84
Identity = 165/465 (35.48%), Postives = 251/465 (53.98%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIIN--VPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            K L++ + IK+T IQ   IP  L+  DV+ AAKTGSGKTLAFLVP++ K+    +    G  A+I+SPTREL++Q +EVL K+ +HT    GL+IGG + + E + +   + IL+ TPGR+L HL+         LQ L++DEADR ++ GF + + AIV  L   RQT+LFSAT                           + V  LA LS+ +   +       +    V  + +T   L Q Y+    +D+  +L++FIK + K K++VF+S+  +V + YE F  +   + ++ LHG+Q Q  R +  +KFN  +   +F TDV ARG+D P VDWV+Q D P+D   YIHRVGR AR G  G++LI L P+E + FL  L   K+   +    +SK   I+   + ++  +  L++  +  F ++VR+ Y       F   +L     A + GL   P +
Sbjct:   54 KGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSAT-------------------------QSQSVADLARLSLTDYKTV---GTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIMLTPQEQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVRSIYVQKDKQVFKFDELPTEEFAYSLGLPGAPKI 489
[Close]
BLAST of RNA helicase vs. Ensembl Yeast
Match: RRP3 (Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity [Source:SGD;Acc:S000001107])

HSP 1 Score: 209.534 bits (532), Expect = 1.029e-61
Identity = 132/369 (35.77%), Postives = 196/369 (53.12%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLP-KKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQAL 1221
            +A K++N  K TPIQ + IP  LE  D++G A+TGSGKT AF +P++N++ +   EP +   A I++PTREL+ Q  E    L +   +R+  ++GG N   +A+ L     I++ATPGRL+DHL NTK F   +L+ L++DEADRL++  F   +  I++ +P ++R T LFSAT+     K                       L  A L+    C              V     TV  L Q  +V     +   L   + +   K +++F  T    +    L N++     ALHG  +Q +R+ + + F   + +I+  TDVAARGLDIP VD V+ YD P D K YIHRVGRTARAG +G+++
Sbjct:   94 QACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYY---ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDK-----------------------LQRASLTNPVKC-------------AVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSI 422
[Close]
BLAST of RNA helicase vs. Ensembl Yeast
Match: SPB4 (Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients [Source:SGD;Acc:S000001894])

HSP 1 Score: 209.92 bits (533), Expect = 6.359e-61
Identity = 152/491 (30.96%), Postives = 235/491 (47.86%), Query Frame = 1 
Query:  115 KKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVL-----NSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTE-----LRTGLLIGGNNRQVE---AKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANV---VGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELF------NII--NVPVLALHGKQSQPKRLKNFEKFNEN-EAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLP--IQESYEKIVESNSALQHSAKSGFTTFVRAYCSFS-LSCFDVHKLDLAALAKTFGLKEPPHV 1500
            +  L  M    MTP+Q   IP L  NKDV+  + TGSGKT AF++P++ KV+      S F+  H   ++I++PTRELS Q   V+   + H       ++  LL+G N   V    + +L+    IL+ TPGR+LD L             +++DEADRL++  F+++   I+R LPK+R+T LFSAT++ + +                                       D+ K  L   V   V   N   S L   Y V  P+++ +LL + +   + KK +V+  TC+ V YFY         NI+   V + +LHGK     R K    F ++   +++F TDVAARG+DIP VD V+Q DPP +   ++HR GRT RA   G+A+ FL    E DF+  +    V + E + +   +     ++    I+E         K+ +  F++ Y + S  S F +  LD   +AK +GL   P +
Sbjct:   19 RTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVKEEANTSKFKKAH-FHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKT-SACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSATMRSAGS---------------------------------------DIFKTGLRNPVRITVNSKNQAPSSLKLNYCVVNPAEKLQLLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTDSLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGKAITFLNEGREEDFIPFMQVKNVELEELDLEVKGITTNFYEDFRNWILEDRDRFDKGVKA-YVAFIKYYSNHSATSIFRLQSLDYVGIAKLYGLFRLPRM 467
[Close]
BLAST of RNA helicase vs. Ensembl Yeast
Match: DRS1 (Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000003931])

HSP 1 Score: 211.075 bits (536), Expect = 2.083e-60
Identity = 127/386 (32.90%), Postives = 210/386 (54.40%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRH--GTAAIIMSPTRELSVQTFEVLRKLVAHTELRT-GLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENC-MLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFR--LLYTFIKK---NQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD 1248
            K L  +  +K +PIQ   IP  L  KD++  A TGSGKT AF++P++ ++L   ++P     T  I++ PTREL++Q  +V +++       T GL +GG N + + + L+    I++ATPGR +DH+ N+  F    ++ L++DEADR++E+GF +E+  I+  LP  RQ +LFSAT+                           K+ +L  LS+K+   ++ID  K+              ++L+Q +V  +  D  +  LL+  I+K     +K+I+VF++          +  ++ + V  LHG  +Q +RL +  KF   E  ++ CTD+A+RGLDIP ++ V+ YD P   + Y+HRVGRTARAG  G+++ F+     D
Sbjct:  244 KGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLL---YKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATM-------------------------NSKIKSLVSLSLKKPVRIMIDPPKK------------AATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQD 589
[Close]
BLAST of RNA helicase vs. Ensembl Nematostella
Match: EDO38731 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC22])

HSP 1 Score: 441.81 bits (1135), Expect = 6.143e-151
Identity = 229/467 (49.04%), Postives = 300/467 (64.24%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISV 1512
            + +KDM    MT IQ + I  LL+ +D++GAAKTGSGKTLAFLVP+V  +    F+ R+GT  II+SPTRELS+QT+ V R L+ H     G+++GG NR+ EA+ LQ+GV +L+ATPGRLLDHL NT+ FL+  LQ L+IDEADR++E GF EEM  I+R LP KRQTVLFSAT                           + V  LA LS+K + + + +   K        + +TV  L QGY+V     RF +L+TF+KKN+ KK+MVF S+C  VKY  EL N I++PVL +HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDP DDPKEYIHRVGRTAR     G AL+FL PEE  FL  L   KVP+ E++F  SK+L IQ   E+++E N  L  SAK  +  +++AY S    S F+V+ LDL  +A +FG   PP V ++V
Sbjct:   14 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSAT-------------------------QTKNVEDLAKLSLKRSPLYVGVDDHK--------ETSTVEGLEQGYIVVPSEKRFLVLFTFLKKNRSKKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTARGTEGKGHALLFLLPEELAFLRYLKHAKVPLNEYDFSSSKILNIQSQLERLIEKNYYLHKSAKDAYKAYIQAYASHQHKSIFNVNSLDLQRVALSFGFAVPPSVSLNV 447
[Close]
BLAST of RNA helicase vs. Ensembl Nematostella
Match: EDO41969 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2R2])

HSP 1 Score: 317.775 bits (813), Expect = 7.312e-101
Identity = 174/454 (38.33%), Postives = 260/454 (57.27%), Query Frame = 1 
Query:  151 TPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRP-EETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
            T IQ + IP  L  +DV+GAAKTGSGKTLAFL+P++  +    +    G  A+++SPTREL+ QTFEVL K+    +L  GL+IGG + + E K + +   I+V TPGRLL H++ T  F    LQ L++DEADR+++ GF   + AI+  LP +RQT+L+SAT                             V  LA LS++E   +    K          D +T ++L+Q YVVC+  D+   L++FI+ + K KI+VF+S+C +VK+ YE F  +   +P++AL+GKQ Q KR+  +++F +    ++F TD+AARGLD P V+WV+Q D P+D   YIHR GRTAR    GQ+L+ L P EE + +  L   KVP+ E + +  KM  IQ   E  +  +  L+H A+    ++VR+ +   +   FD  KL +   + + GL   P +
Sbjct:   74 TDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSAT-------------------------QTRSVKDLARLSLQEPTYISAHEK---------SDTSTPNRLTQSYVVCELPDKLNFLFSFIRNHLKSKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGLDFPAVNWVIQLDCPEDANTYIHRAGRTARYQKDGQSLLVLLPSEEQEMIKALKDKKVPINEIKVNPKKMSSIQSKLESFLAQDQELKHWAQKSIISYVRSVFLQSNKKIFDTTKLPIKEFSVSLGLSNAPRI 492
[Close]
BLAST of RNA helicase vs. Ensembl Nematostella
Match: EDO41335 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4S3])

HSP 1 Score: 266.159 bits (679), Expect = 8.662e-82
Identity = 174/471 (36.94%), Postives = 247/471 (52.44%), Query Frame = 1 
Query:  121 ALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEVLRKLVAHT-ELRTGLLIGGNNRQVEAKYLQ-EGVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFN--IINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEFDESKMLP-IQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPP 1494
            ++K MN   MTP+Q   IP  + NKDV   A TGSGKTLAF++P++  +L    +  +H   A+I++PTREL+ Q  EV+  LV     +R  LLIGG +   + K  + EG  I++ TPGRL D L   +  +        L+ L++DEADRL++ GF   +  I+  LPK+R+T LFSAT                           ++V  L    ++    +    K     NV      T S L   Y++C+  ++F  L  F+K  + KK MVF STC  V YF +     + NV ++ALHGK  +  R K F+ F + E+ I+ CTDV ARG+DIP V+WV+QYDPP     ++HR GRTAR GN G A++FL P E  ++  ++ N KVP+   E D  K  P I    +K+   +  L       F +FV+AY     S  F   +LDL  LA+ FGL   P
Sbjct:   19 SMKKMNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRLEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSAT-------------------------QTDEVEALVRAGLRNPVRVTVREKLTKTKNV----QRTPSTLQNFYLICRSHEKFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALHGKM-KSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVFLLPTEDSYVDFISINQKVPLQALEPD--KDAPNITAKLKKLATKDRDLFEKGTKAFVSFVQAYKKHECSLIFRFKELDLGLLAEGFGLLRLP 457
[Close]
BLAST of RNA helicase vs. Ensembl Nematostella
Match: EDO36246 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ72])

HSP 1 Score: 259.61 bits (662), Expect = 2.516e-79
Identity = 173/504 (34.33%), Postives = 271/504 (53.77%), Query Frame = 1 
Query:  130 DMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLN--SNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRT-GLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKK------RQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATV-----SQLSQGYVVCKPSDRFRLLYTFI----KKNQKKKIMVFMSTCLEVKYFYELFNII-------NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS---CFDVHKLDLAALAKTFGLKEPPHVMISVSGKS-NPKSNKRKKQ 1554
            ++ + K+T +Q   IP LL  +DV   +KTGSGKTL + +P+V  + +     E   G  A+++ PTREL++Q+F +L KLV   +    GL++GG  R+ E   L++G+ ILVATPGRLLDH+  T+   F  +Q +++DEADRL++ GF ++++AI++ +  +      RQ VL SATL                            V  L  +++  N   +  S    +    G  + +V     SQL Q +V+     R   L +FI    +++ + K++VF+S+   V + Y LF+            +  LHG  SQ +R   F K++ ++  I+  TDVAARGLD+P V W++QYD P    +Y+HRVGRTAR G  GQAL+FL P E  +L  L+         EF+   + P + S  KI+++ +++  S+K    +FVR+Y +F  S    F V+ L L  +AK F L++PP     +SG + + KS  +KKQ
Sbjct:  125 NVGVSKLTSVQKAAIPTLLAGEDVCIKSKTGSGKTLCYAIPVVQTLQDIVPKIERADGPYAVVLVPTRELALQSFNLLLKLVKPFQWVVPGLVVGGEKRKSEKARLRKGINILVATPGRLLDHIEKTQCLTFRNVQWIVLDEADRLLDMGFEKDVSAILKAIKDQQIKAMHRQAVLLSATLTQG-------------------------VKQLVSIAL-SNPQFVSESGLNQQVEKDGSLDESVLAQIPSQLKQYFVIVPSKMRLVSLASFILSKVQESPQNKMIVFLSSRDSVDFHYGLFDKCLGLGAGKKPELYKLHGSMSQTERTDVFTKYSSSQEGILLSTDVAARGLDLPRVSWIIQYDTPGSAVDYVHRVGRTARIGCEGQALLFLTPAEVKYLETLS---------EFN---IRPEELSVSKILQTLTSI--SSKDVKKSFVRSYATFPASLKHIFHVNNLHLGHVAKAFALRDPP---TGISGTTRDSKSVTKKKQ 585
[Close]
BLAST of RNA helicase vs. Ensembl Nematostella
Match: EDO43011 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZV2])

HSP 1 Score: 213.772 bits (543), Expect = 1.566e-63
Identity = 131/399 (32.83%), Postives = 210/399 (52.63%), Query Frame = 1 
Query:  133 MNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKN-QKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLL-AKNKVPVTEFEFDESKMLPI 1323
            M + K T IQ  C+P +L+ +D +G AKTGSGKT AF +P++ K+ +  +    G  A++++PTREL+ Q  +  + L     L+  +++GG +   +A  L     +++ATPGRL DH+ +T      ++Q L++DEADRL++  F +++  I   +P+KRQT+LFSATL                                   +M E   L  MS  +  +  V  D ATV++L Q Y++     R   L   +++N   + ++VF  TC   +    +F+ + +  + LH   SQ +RL    +F      I+  TDVA+RGLDIP V+ V+  + P DPK+YIHRVGRTARAG  G A+  +   + D +  +  K    +TE+   E ++L +
Sbjct:   25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPY----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATLTD---------------------------------TMGE---LQKMSGSQPFSYEVQSDIATVAELDQRYLLTPAHVRDCYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKIEEKINTKLTEYTTSEKEVLTL 383
[Close]
BLAST of RNA helicase vs. Ensembl Medaka
Match: ddx18 (DEAD-box helicase 18 [Source:NCBI gene;Acc:101158147])

HSP 1 Score: 464.922 bits (1195), Expect = 1.332e-157
Identity = 240/478 (50.21%), Postives = 313/478 (65.48%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNA-GQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL-SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKR 1545
            K +K+M    MT IQ + +  LLE +DV+ AAKTGSGKTLAFL+P +  +    F PR+GT  II+SPTREL++QT+ VL++L+ H     GL++GG+NR  EA+ L  GV ILVATPGRLLDHL NT  F+F  LQ LIIDEADR++E GF EE+  I++ LPK+RQT+LFSAT                            +V  LA +S+K+  + + +   K        DNATV  L QGYVVC    RF LL+TF+KKN+KKK+MVF S+C+ VK+ YEL N I++PV+A+HGKQ Q KR   F +F   ++ I+ CTDVAARGLDIP VDW++QYDPPDDPKEYIHRVGRTAR  +  G AL+ LRPEE  FL  L + KVP++EFEF  SK+  IQ   EK++E N  L  SA+  + ++VRAY S SL   + V+ L+L  +A +FG K PP+V ++V      K  KR
Sbjct:  164 KGVKEMGFQHMTEIQHKTVRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQRLANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTMLFSAT-------------------------QTRRVEDLARISLKKEPLYVGVDDNK--------DNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNLPMVALSFGFKVPPYVDLNVHSSKGAKLQKR 608
[Close]
BLAST of RNA helicase vs. Ensembl Medaka
Match: ddx10 (DEAD-box helicase 10 [Source:NCBI gene;Acc:101161476])

HSP 1 Score: 305.449 bits (781), Expect = 7.492e-94
Identity = 176/464 (37.93%), Postives = 266/464 (57.33%), Query Frame = 1 
Query:  121 ALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRA-YCSFSLSCFDVHKLDLAALAKTFGLKEPPHV 1500
             L++    + T IQ + I   L  +DV+GAAKTGSGKTLAFL+P++  +    +    G  A+I+SPTREL+ QTFEVLRK+  + E   GL+IGG + + EA+ +     I+V TPGRLL H++ T  F    L  L++DEADR+++ GF + + AIV  LP+ RQT+LFSAT                           + V  LA LS+K+   +    K +          +T + L Q YVVC+   +  LL++FI+ +  KKI+VF + C +V+Y + +F  +   +PVLALHG+Q Q KR++ +  F   + A++F TD+AARGLD P V+WVLQ+D P+D   YIHRVGRTAR    G+AL+ L P E +  ++ L + KVP+ + + +  K+  IQ+  E  +      +  A+  F +++R+ +   + + FDV KL++   A + GL   P V
Sbjct:   89 GLQEAQFRQPTEIQRQTIGLALRGRDVLGAAKTGSGKTLAFLIPVLECLYRHQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKTEAERIPR-TNIVVCTPGRLLQHMDQTACFHASGLLMLVLDEADRILDMGFADTLNAIVENLPRTRQTLLFSAT-------------------------QTKSVKDLARLSLKDPEYVWVHDKARF---------STPASLEQSYVVCELHQKVDLLFSFIRGHLTKKIIVFFACCKQVQYLFRVFCRLRPGMPVLALHGRQPQVKRVEVYNDFVRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEALLLLLPSEAEAMVAQLQEKKVPINQIQVNPEKLQSIQQKLEAFLAQEKEQKERAQRCFVSYLRSVHLMKNKAVFDVSKLNINQYAHSLGLAVAPRV 517
[Close]
BLAST of RNA helicase vs. Ensembl Medaka
Match: ddx31 (DEAD-box helicase 31 [Source:NCBI gene;Acc:101158115])

HSP 1 Score: 260.766 bits (665), Expect = 1.286e-77
Identity = 172/547 (31.44%), Postives = 270/547 (49.36%), Query Frame = 1 
Query:  127 KDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPR----HGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPK---KRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMS------------------KEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFI-KKNQKKKIMVFMSTCLEVKYFYELFNII-----NVPVLA---LHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDE----------------------SKMLP---------IQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL---SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVG 1560
            K +N+  +T +Q + IP L   +D +  ++TGSGKTL++ VPLV  +   + +P+     G  A+++ PTREL+VQTF++ +KL+   T +  G+L+GG  R+ E   +++G+ ILV+TPGRL+DH+ +T    F  ++ L++DEADR ++ GF +++T I+  L      RQ VL SATL                              TL    + + C+   +S                      EA       A    L Q  VV     R   L  F+  K +  K++VF+S+C  V++ + LF  +       P L+   LHG   Q +R + F+ F+ +++ ++ CTDVAARGLD+PLV W++QY PP    EY+HRVGRTAR G  G +L+FL P ET F+S LA + + ++E +  E                      SK L          +Q  +E  V S++    +AK    +++RAY ++       F +  L L   AK+FGL++ P  + S  G   P +  + K V 
Sbjct:  202 KVLNVSTLTSVQKQTIPVLQSGRDALVRSQTGSGKTLSYAVPLVQSL--QSIQPKVSRSDGPLALVIVPTRELAVQTFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLVDHIKHTLSIAFSAVRWLVLDEADRTLDLGFDKDLTVILNSLNSTGPARQNVLLSATL------------------------------TLGVSRLADVCLKDPVSIQVSGPSSSSDHTGSSHVTSDTEAANTSESFAVPEALRQFAVVVPSKIRLVCLAAFVLDKCKDNKVIVFVSSCEAVEFLHSLFTSVLTRPAAYPRLSFQRLHGNMKQEERSEVFQLFSASQSGVLLCTDVAARGLDLPLVTWIVQYTPPSSAAEYVHRVGRTARIGGRGSSLLFLTPAETAFISELANHNISLSEMKLQEILSCLMLDDTYRGRGKYYSKTSSKALEQEVRERATVLQTEFENFVHSDAQSLQAAKKALQSYLRAYTTYPAHLKHIFHIRFLHLGHAAKSFGLRDAPGGLSSALGSKGPGTKGKNKNVA 716
[Close]
BLAST of RNA helicase vs. Ensembl Medaka
Match: ddx31 (DEAD-box helicase 31 [Source:NCBI gene;Acc:101158115])

HSP 1 Score: 260.766 bits (665), Expect = 1.286e-77
Identity = 172/547 (31.44%), Postives = 270/547 (49.36%), Query Frame = 1 
Query:  127 KDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPR----HGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPK---KRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMS------------------KEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFI-KKNQKKKIMVFMSTCLEVKYFYELFNII-----NVPVLA---LHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDE----------------------SKMLP---------IQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSL---SCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVG 1560
            K +N+  +T +Q + IP L   +D +  ++TGSGKTL++ VPLV  +   + +P+     G  A+++ PTREL+VQTF++ +KL+   T +  G+L+GG  R+ E   +++G+ ILV+TPGRL+DH+ +T    F  ++ L++DEADR ++ GF +++T I+  L      RQ VL SATL                              TL    + + C+   +S                      EA       A    L Q  VV     R   L  F+  K +  K++VF+S+C  V++ + LF  +       P L+   LHG   Q +R + F+ F+ +++ ++ CTDVAARGLD+PLV W++QY PP    EY+HRVGRTAR G  G +L+FL P ET F+S LA + + ++E +  E                      SK L          +Q  +E  V S++    +AK    +++RAY ++       F +  L L   AK+FGL++ P  + S  G   P +  + K V 
Sbjct:  202 KVLNVSTLTSVQKQTIPVLQSGRDALVRSQTGSGKTLSYAVPLVQSL--QSIQPKVSRSDGPLALVIVPTRELAVQTFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLVDHIKHTLSIAFSAVRWLVLDEADRTLDLGFDKDLTVILNSLNSTGPARQNVLLSATL------------------------------TLGVSRLADVCLKDPVSIQVSGPSSSSDHTGSSHVTSDTEAANTSESFAVPEALRQFAVVVPSKIRLVCLAAFVLDKCKDNKVIVFVSSCEAVEFLHSLFTSVLTRPAAYPRLSFQRLHGNMKQEERSEVFQLFSASQSGVLLCTDVAARGLDLPLVTWIVQYTPPSSAAEYVHRVGRTARIGGRGSSLLFLTPAETAFISELANHNISLSEMKLQEILSCLMLDDTYRGRGKYYSKTSSKALEQEVRERATVLQTEFENFVHSDAQSLQAAKKALQSYLRAYTTYPAHLKHIFHIRFLHLGHAAKSFGLRDAPGGLSSALGSKGPGTKGKNKNVA 716
[Close]
BLAST of RNA helicase vs. Ensembl Medaka
Match: ddx55 (DEAD-box helicase 55 [Source:NCBI gene;Acc:101161657])

HSP 1 Score: 256.144 bits (653), Expect = 1.808e-77
Identity = 171/486 (35.19%), Postives = 257/486 (52.88%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFE-PRHGTAAIIMSPTRELSVQTFEV----LRKLVAHTELRTGLLIGGNNRQVEAKYLQE-GVTILVATPGRLLDHLNNTKFFL-----FHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNII--NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-KVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLS-CFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNP 1530
            + L+++    MTP+Q  C+P  + NKDV   A TGSGKTLAF++P++  +L    +  +    A++++PTREL++Q  EV    LR+    T++   LL+GG+N   +   L++ G  I++ATPGRL D        L        L  L++DEADRL++ GF   +  I+  LPK+R+T LFSAT      K                       L  A L    N + I + ++ L A        T S+LS  Y VC+  ++F  L  F+++++ +K +VF STC  V+++     ++   VPV  +HGK    KR   F  F + ++ I+ CTDV ARG+DIP V+WVLQYDPP     ++HR GRTAR GN G AL+FL P E  +++ L+ N K P+ E     S ++ +    + +  ++ A        F ++V+AY     S  F V  LD AALA+ FGL   P  M  + GK+ P
Sbjct:   22 ETLRELRFTHMTPVQAACVPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMETFLRRFPEFTQI---LLVGGSNPAEDVDRLKDRGGNIVIATPGRLEDMFRRKSEGLDLASAVRSLDVLVLDEADRLLDMGFESSLNTILSFLPKQRRTGLFSATQTQELEK-----------------------LVRAGL---RNPVRITVKEKGLAAAAPA--QKTPSRLSNYYTVCRADEKFNHLVAFLRQHKHEKQLVFFSTCACVEFYGRALELLVRKVPVCCIHGKMKN-KRNSIFADFRKLKSGILVCTDVMARGVDIPDVNWVLQYDPPSRASAFVHRCGRTARIGNYGNALVFLLPMEETYVNFLSINQKCPLQEMP-PISDVVDVLPKVKAMALADRAAFERGMKAFVSYVQAYAKHECSLIFRVKDLDFAALARGFGLLRLPK-MPELRGKTFP 473
[Close]
BLAST of RNA helicase vs. Planmine SMEST
Match: SMESG000060345.1 (SMESG000060345.1)

HSP 1 Score: 977.622 bits (2526), Expect = 0.000e+0
Identity = 520/523 (99.43%), Postives = 522/523 (99.81%), Query Frame = 1 
Query:   34 MSEDNIIPGCQXXXXXXXXXXXXXXXXKKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDDNYFVPSKQ 1602
            MSEDNIIPGCQIIINNNFEELNINENIKKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV HTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLKMSSAKLKMKMKKPEI+K+SSKVSTEEKVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDDNYFVPSKQ
Sbjct:    1 MSEDNIIPGCQIIINNNFEELNINENIKKALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVVHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLKMSSAKLKMKMKKPEIDKRSSKVSTEEKVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKSNKRKKQVGMNSDDDNYFVPSKQ 523
[Close]
BLAST of RNA helicase vs. Planmine SMEST
Match: SMESG000004585.1 (SMESG000004585.1)

HSP 1 Score: 254.988 bits (650), Expect = 4.525e-78
Identity = 155/444 (34.91%), Postives = 240/444 (54.05%), Query Frame = 1 
Query:  118 KALKDMNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHL---------NNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYEL---FNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETD-FLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKSGFTTFVRAY 1410
            KAL  MN I  T IQ + +PH L  KD++ + KTGSGKTLA+L+PL+N VL   F   HGT AI++ PT+EL +Q   +  +L     ++  ++   +  + +   L  G T+L  TPG LL H+          N ++F +H L+ L++DEADRL+E  F   ++ I+  LP+KRQT++ SATL                   +S    +   L+ + +S+  N          L++  +   NAT   L++GYV+   S R   LY+ +K+ + +K+M+F ST  EV+++Y      NI N  +L LH   +   R+ N   FN  ++ I+ CTDV +RG+DIP V  ++Q+D P D   YIHRVGRTAR G  G A++ LRP E++  LS L+   +  +  EF+   +  I+  +E +    S L  +AK    + ++AY
Sbjct:   54 KALDSMNFIHATDIQAKILPHALNFKDIIASEKTGSGKTLAYLIPLLNLVLKFRFRNYHGTCAIVLVPTKELCIQVCSIFSQLSQFCNVKYDMIHSDDINKDQKTKLALGCTVLFCTPGALLQHMKCSLETKEKENIEYFRYHNLKFLVLDEADRLLEDSFKSTISKILNYLPQKRQTMVLSATL-----------------DLNSVSIGDISTLSPSFVSININ----------LKSGKILNKNATADNLTEGYVILPSSKRIIFLYSLVKEIKDRKVMIFFSTSAEVEFYYSFLSLLNINNNSLLMLHSDLTSDTRMSNLLSFNNQKSGILLCTDVVSRGMDIPDVSLIVQFDIPTDFTTYIHRVGRTARNGLEGIAILLLRPGESEKVLSCLS--SISKSMIEFETPHLHEIENFFEHL-SPKSELFQTAKKALISQIKAY 467
[Close]
BLAST of RNA helicase vs. Planmine SMEST
Match: SMESG000017301.1 (SMESG000017301.1)

HSP 1 Score: 241.891 bits (616), Expect = 3.508e-71
Identity = 180/542 (33.21%), Postives = 267/542 (49.26%), Query Frame = 1 
Query:  118 KALKD-MNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVN--KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKR-----QTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLS-----QGY-VVCKPSDRFRLLYTFI-----KKNQKKKIMVFMSTCLEVKYFYELFNII----------------------NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-------KV---PVTEFEFDESKMLPIQESYEKI--------------VESNSALQHSAKSGFTTFVRAYCSFSLSC---FDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKS 1536
            K L D M +   T IQ + IP LL  KDV+  + TGSGKTL++ +PL+N  + L+       G  AI++SPTREL+VQT +VL KL      + TG+LIGG   Q++ K L++G+ IL++TP RLL HL  ++    + LQ LIIDEADR+ E G+ E +  ++ ++ K+R     QTVL SATL                          + V  LA L++K N +  ++       N+V  +   V   S     Q Y +VC    R   L +F+           K++VFM+T   V++ Y+LF++                       +V +  LHG     KR   F  F+   A  +  TDV +RGLD+  ++WV+QY PP +P +YIHRVGRTARAG+ G+AL+FL+P E ++++ L  +       KV    V E     S  L  ++S   I              V S+  LQ  A++G+ + VR+Y  FS      F    L L  +AK+    E P  +     ++ P+S
Sbjct:  150 KTLSDRMKITISTAIQEKAIPPLLNGKDVLIKSATGSGKTLSYAIPLINSLQALDPPITRESGVYAIVISPTRELAVQTQDVLTKLSNPFVRIVTGMLIGGVKMQIQKKALRKGLNILISTPNRLLYHLEKSEGLKLNNLQWLIIDEADRITELGYAENVRQVMEQIKKQRQLESLQTVLISATL-------------------------TKGVENLAGLALK-NPVRAEVDYIGKPNNIVNPEEEAVDSFSMPIGLQHYLLVCPTKLRMVALLSFLLLKCKYGKHTGKVVVFMATQDLVEFHYQLFHVFLRNKSLLQELPNTDNTEIDQSTSVDIFQLHGGMEHDKRQAVFRNFSACSAGFLLTTDVCSRGLDMSGINWVVQYHPPGNPIDYIHRVGRTARAGSKGKALLFLQPAEVNYINHLQTSVGGLHIQKVSLRSVMETALHHSGTLRTRKSAHTIEESIFLTAKLLEDHVSSDPILQSLARNGYKSLVRSYTCFSKEMRQFFCYRDLHLGHVAKSMACMETPREISRNCTRNCPES 665
[Close]
BLAST of RNA helicase vs. Planmine SMEST
Match: SMESG000017301.1 (SMESG000017301.1)

HSP 1 Score: 241.506 bits (615), Expect = 3.907e-71
Identity = 180/542 (33.21%), Postives = 267/542 (49.26%), Query Frame = 1 
Query:  118 KALKD-MNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVN--KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKR-----QTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLS-----QGY-VVCKPSDRFRLLYTFI-----KKNQKKKIMVFMSTCLEVKYFYELFNII----------------------NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-------KV---PVTEFEFDESKMLPIQESYEKI--------------VESNSALQHSAKSGFTTFVRAYCSFSLSC---FDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKS 1536
            K L D M +   T IQ + IP LL  KDV+  + TGSGKTL++ +PL+N  + L+       G  AI++SPTREL+VQT +VL KL      + TG+LIGG   Q++ K L++G+ IL++TP RLL HL  ++    + LQ LIIDEADR+ E G+ E +  ++ ++ K+R     QTVL SATL                          + V  LA L++K N +  ++       N+V  +   V   S     Q Y +VC    R   L +F+           K++VFM+T   V++ Y+LF++                       +V +  LHG     KR   F  F+   A  +  TDV +RGLD+  ++WV+QY PP +P +YIHRVGRTARAG+ G+AL+FL+P E ++++ L  +       KV    V E     S  L  ++S   I              V S+  LQ  A++G+ + VR+Y  FS      F    L L  +AK+    E P  +     ++ P+S
Sbjct:  145 KTLSDRMKITISTAIQEKAIPPLLNGKDVLIKSATGSGKTLSYAIPLINSLQALDPPITRESGVYAIVISPTRELAVQTQDVLTKLSNPFVRIVTGMLIGGVKMQIQKKALRKGLNILISTPNRLLYHLEKSEGLKLNNLQWLIIDEADRITELGYAENVRQVMEQIKKQRQLESLQTVLISATL-------------------------TKGVENLAGLALK-NPVRAEVDYIGKPNNIVNPEEEAVDSFSMPIGLQHYLLVCPTKLRMVALLSFLLLKCKYGKHTGKVVVFMATQDLVEFHYQLFHVFLRNKSLLQELPNTDNTEIDQSTSVDIFQLHGGMEHDKRQAVFRNFSACSAGFLLTTDVCSRGLDMSGINWVVQYHPPGNPIDYIHRVGRTARAGSKGKALLFLQPAEVNYINHLQTSVGGLHIQKVSLRSVMETALHHSGTLRTRKSAHTIEESIFLTAKLLEDHVSSDPILQSLARNGYKSLVRSYTCFSKEMRQFFCYRDLHLGHVAKSMACMETPREISRNCTRNCPES 660
[Close]
BLAST of RNA helicase vs. Planmine SMEST
Match: SMESG000017301.1 (SMESG000017301.1)

HSP 1 Score: 241.506 bits (615), Expect = 5.192e-71
Identity = 180/542 (33.21%), Postives = 267/542 (49.26%), Query Frame = 1 
Query:  118 KALKD-MNMIKMTPIQGRCIPHLLENKDVMGAAKTGSGKTLAFLVPLVN--KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLV-AHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKR-----QTVLFSATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLS-----QGY-VVCKPSDRFRLLYTFI-----KKNQKKKIMVFMSTCLEVKYFYELFNII----------------------NVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEETDFLSLLAKN-------KV---PVTEFEFDESKMLPIQESYEKI--------------VESNSALQHSAKSGFTTFVRAYCSFSLSC---FDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPKS 1536
            K L D M +   T IQ + IP LL  KDV+  + TGSGKTL++ +PL+N  + L+       G  AI++SPTREL+VQT +VL KL      + TG+LIGG   Q++ K L++G+ IL++TP RLL HL  ++    + LQ LIIDEADR+ E G+ E +  ++ ++ K+R     QTVL SATL                          + V  LA L++K N +  ++       N+V  +   V   S     Q Y +VC    R   L +F+           K++VFM+T   V++ Y+LF++                       +V +  LHG     KR   F  F+   A  +  TDV +RGLD+  ++WV+QY PP +P +YIHRVGRTARAG+ G+AL+FL+P E ++++ L  +       KV    V E     S  L  ++S   I              V S+  LQ  A++G+ + VR+Y  FS      F    L L  +AK+    E P  +     ++ P+S
Sbjct:  153 KTLSDRMKITISTAIQEKAIPPLLNGKDVLIKSATGSGKTLSYAIPLINSLQALDPPITRESGVYAIVISPTRELAVQTQDVLTKLSNPFVRIVTGMLIGGVKMQIQKKALRKGLNILISTPNRLLYHLEKSEGLKLNNLQWLIIDEADRITELGYAENVRQVMEQIKKQRQLESLQTVLISATL-------------------------TKGVENLAGLALK-NPVRAEVDYIGKPNNIVNPEEEAVDSFSMPIGLQHYLLVCPTKLRMVALLSFLLLKCKYGKHTGKVVVFMATQDLVEFHYQLFHVFLRNKSLLQELPNTDNTEIDQSTSVDIFQLHGGMEHDKRQAVFRNFSACSAGFLLTTDVCSRGLDMSGINWVVQYHPPGNPIDYIHRVGRTARAGSKGKALLFLQPAEVNYINHLQTSVGGLHIQKVSLRSVMETALHHSGTLRTRKSAHTIEESIFLTAKLLEDHVSSDPILQSLARNGYKSLVRSYTCFSKEMRQFFCYRDLHLGHVAKSMACMETPREISRNCTRNCPES 668
The following BLAST results are available for this feature:
BLAST of RNA helicase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DDX181.379e-15349.79DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:... [more]
DDX103.532e-10439.87DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:... [more]
DDX109.002e-10339.87DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:... [more]
DDX102.061e-10239.87DEAD-box helicase 10 [Source:HGNC Symbol;Acc:HGNC:... [more]
DDX558.838e-7835.26DEAD-box helicase 55 [Source:HGNC Symbol;Acc:HGNC:... [more]
back to top
BLAST of RNA helicase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
B0511.63.401e-13546.79RNA helicase [Source:UniProtKB/TrEMBL;Acc:O61815][more]
Y23H5B.62.177e-8934.39RNA helicase [Source:UniProtKB/TrEMBL;Acc:A0A061A... [more]
H20J04.42.173e-6534.20pep chromosome:WBcel235:II:4329023:4332507:1 gene:... [more]
H20J04.47.383e-6533.58pep chromosome:WBcel235:II:4329023:4334091:1 gene:... [more]
H20J04.47.383e-6533.58pep chromosome:WBcel235:II:4329023:4334484:1 gene:... [more]
back to top
BLAST of RNA helicase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pit4.427e-15448.95gene:FBgn0266581 transcript:FBtr0084174[more]
pit4.427e-15448.95gene:FBgn0266581 transcript:FBtr0346345[more]
pit4.427e-15448.95gene:FBgn0266581 transcript:FBtr0084175[more]
CG58001.820e-8234.18gene:FBgn0030855 transcript:FBtr0074453[more]
CG96306.169e-6734.36gene:FBgn0037561 transcript:FBtr0081866[more]
back to top
BLAST of RNA helicase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ddx189.423e-15650.00DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:... [more]
ddx102.496e-9736.71DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:... [more]
ddx554.793e-7935.88DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:... [more]
ddx315.428e-7932.71DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:... [more]
BX510918.12.189e-7231.89DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:... [more]
back to top
BLAST of RNA helicase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pard3b1.182e-10238.96par-3 family cell polarity regulator beta [Source:... [more]
pard3b2.978e-10238.96par-3 family cell polarity regulator beta [Source:... [more]
pard3b7.769e-10138.96par-3 family cell polarity regulator beta [Source:... [more]
pard3b2.049e-10038.96par-3 family cell polarity regulator beta [Source:... [more]
pard3b6.245e-9539.95par-3 family cell polarity regulator beta [Source:... [more]
back to top
BLAST of RNA helicase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ddx185.633e-15249.15DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:... [more]
Ddx102.086e-9938.71DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:... [more]
Ddx317.803e-8032.17DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [S... [more]
Ddx554.716e-7835.46DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:... [more]
Ddx552.334e-7735.06DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:... [more]
back to top
BLAST of RNA helicase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9VD51|DDX18_DROME4.438e-15348.95Probable ATP-dependent RNA helicase pitchoune OS=D... [more]
sp|Q9NVP1|DDX18_HUMAN6.620e-15349.79ATP-dependent RNA helicase DDX18 OS=Homo sapiens O... [more]
sp|Q54S03|DDX18_DICDI2.668e-15248.78Probable ATP-dependent RNA helicase ddx18 OS=Dicty... [more]
sp|Q4P6N0|HAS1_USTMA1.105e-15149.04ATP-dependent RNA helicase HAS1 OS=Ustilago maydis... [more]
sp|Q6FIL3|HAS1_CANGA1.968e-15147.72ATP-dependent RNA helicase HAS1 OS=Candida glabrat... [more]
back to top
BLAST of RNA helicase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183SK014.004e-17954.58RNA helicase OS=Schistocephalus solidus OX=70667 G... [more]
A0A0X3NMD31.910e-17854.58RNA helicase (Fragment) OS=Schistocephalus solidus... [more]
A0A0F6MV671.284e-17654.38RNA helicase OS=Spirometra erinaceieuropaei OX=998... [more]
A0A4Z2DDH38.340e-17553.50RNA helicase OS=Schistosoma japonicum OX=6182 GN=E... [more]
G4V5G31.585e-17452.50RNA helicase OS=Schistosoma mansoni OX=6183 GN=Smp... [more]
back to top
BLAST of RNA helicase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ddx185.944e-15550.42DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:... [more]
ENSAMXT00000040066.17.860e-13452.56pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000031571.11.061e-13351.63pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ddx103.500e-9337.89DEAD-box helicase 10 [Source:NCBI gene;Acc:1030362... [more]
ddx101.033e-9237.89DEAD-box helicase 10 [Source:NCBI gene;Acc:1030362... [more]
back to top
BLAST of RNA helicase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000010109.11.190e-13250.51pep scaffold:Pmarinus_7.0:GL476492:615610:626431:-... [more]
ddx557.566e-6334.64DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:... [more]
DDX541.323e-6133.87DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:... [more]
ENSPMAT00000000216.11.341e-5933.69pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-... [more]
ddx491.373e-5933.73DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:... [more]
back to top
BLAST of RNA helicase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
HAS13.042e-15347.40ATP-dependent RNA helicase; involved in the biogen... [more]
HCA48.283e-8435.48DEAD box RNA helicase; component of the SSU; inter... [more]
RRP31.029e-6135.77Protein involved in rRNA processing; required for ... [more]
SPB46.359e-6130.96Putative ATP-dependent RNA helicase; nucleolar pro... [more]
DRS12.083e-6032.90Nucleolar DEAD-box protein required for ribosome a... [more]
back to top
BLAST of RNA helicase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO387316.143e-15149.04Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO419697.312e-10138.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO413358.662e-8236.94Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO362462.516e-7934.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO430111.566e-6332.83Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of RNA helicase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ddx181.332e-15750.21DEAD-box helicase 18 [Source:NCBI gene;Acc:1011581... [more]
ddx107.492e-9437.93DEAD-box helicase 10 [Source:NCBI gene;Acc:1011614... [more]
ddx311.286e-7731.44DEAD-box helicase 31 [Source:NCBI gene;Acc:1011581... [more]
ddx311.286e-7731.44DEAD-box helicase 31 [Source:NCBI gene;Acc:1011581... [more]
ddx551.808e-7735.19DEAD-box helicase 55 [Source:NCBI gene;Acc:1011616... [more]
back to top
BLAST of RNA helicase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000060345.10.000e+099.43SMESG000060345.1[more]
SMESG000004585.14.525e-7834.91SMESG000004585.1[more]
SMESG000017301.13.508e-7133.21SMESG000017301.1[more]
SMESG000017301.13.907e-7133.21SMESG000017301.1[more]
SMESG000017301.15.192e-7133.21SMESG000017301.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30003811 ID=SMED30003811|Name=RNA helicase|organism=Schmidtea mediterranea sexual|type=transcript|length=1641bp
ATATAAATCTTATATGATTTTAGTTTAATAAATATGAGTGAAGATAACAT
AATACCTGGTTGTCAAATAATTATTAATAATAATTTTGAAGAACTTAACA
TAAATGAAAATATTAAGAAAGCTCTCAAAGATATGAATATGATAAAAATG
ACTCCAATTCAAGGTAGATGTATTCCACACCTTCTAGAGAACAAAGATGT
TATGGGTGCGGCTAAAACTGGCAGTGGGAAAACATTGGCTTTCTTAGTAC
CATTAGTAAATAAAGTATTAAATAGTAATTTTGAACCAAGACATGGAACA
GCAGCAATAATAATGTCACCAACAAGAGAATTGAGTGTTCAAACATTTGA
AGTTCTAAGAAAACTTGTTGCGCACACAGAATTAAGAACTGGTCTCCTCA
TTGGTGGTAATAATCGTCAAGTCGAAGCCAAATATCTCCAGGAAGGTGTA
ACAATTCTTGTAGCAACACCTGGACGATTGCTCGATCATTTAAATAATAC
AAAATTTTTCTTATTTCATCGACTTCAAACTTTAATAATCGACGAAGCTG
ACCGATTGATGGAACAAGGATTTTTAGAGGAAATGACAGCAATTGTCCGA
AAACTCCCTAAAAAGCGTCAAACTGTTTTGTTTTCTGCTACATTGAAAAT
GAGTTCAGCAAAGTTAAAAATGAAAATGAAAAAACCTGAAATTGAGAAAA
AAAGCTCAAAAGTTTCCACAGAAGAGAAAGTTTTAACTTTGGCTTGTTTG
AGTATGAAAGAAAATTGCATGCTCATCGACATGAGCAAAGAGAAATTGGA
AGCAAACGTCGTAGGCGGAGATAATGCAACCGTATCCCAGTTAAGCCAGG
GATATGTGGTCTGTAAACCCAGCGACCGATTCAGATTACTATACACGTTT
ATTAAGAAAAATCAAAAGAAAAAGATTATGGTATTTATGTCGACGTGTCT
AGAAGTGAAATATTTCTATGAGCTGTTCAACATTATAAATGTGCCGGTGC
TAGCGCTACATGGCAAGCAAAGTCAGCCGAAGAGGCTTAAAAATTTCGAA
AAATTCAATGAGAATGAGGCGGCGATTATATTTTGTACTGACGTGGCGGC
CAGGGGATTGGACATTCCCCTGGTCGATTGGGTGCTTCAGTATGATCCCC
CCGACGATCCGAAGGAATATATTCACAGAGTCGGCCGTACAGCTCGTGCG
GGCAATGCTGGACAGGCTTTGATTTTTCTTAGACCGGAAGAAACCGATTT
CCTGTCACTGCTCGCCAAGAATAAAGTTCCTGTGACTGAATTTGAGTTCG
ACGAGTCGAAAATGTTACCGATTCAAGAATCCTATGAAAAAATTGTCGAG
TCTAATTCTGCTCTTCAGCATTCTGCAAAGTCGGGCTTTACGACTTTCGT
GCGGGCGTATTGCAGTTTCTCGTTGAGTTGCTTCGATGTTCACAAATTGG
ACCTAGCGGCGTTGGCCAAGACATTTGGATTGAAGGAACCGCCTCACGTG
ATGATCTCGGTTTCCGGGAAATCAAATCCCAAGTCTAACAAGCGGAAGAA
ACAAGTCGGTATGAATAGTGACGATGATAATTATTTTGTACCGTCTAAGC
AAAAGAAATTTGAATAAATTTTATTTTTCTTTTTAAAAAAA
back to top

protein sequence of SMED30003811-orf-1

>SMED30003811-orf-1 ID=SMED30003811-orf-1|Name=SMED30003811-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=528bp
MSEDNIIPGCQIIINNNFEELNINENIKKALKDMNMIKMTPIQGRCIPHL
LENKDVMGAAKTGSGKTLAFLVPLVNKVLNSNFEPRHGTAAIIMSPTREL
SVQTFEVLRKLVAHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLL
DHLNNTKFFLFHRLQTLIIDEADRLMEQGFLEEMTAIVRKLPKKRQTVLF
SATLKMSSAKLKMKMKKPEIEKKSSKVSTEEKVLTLACLSMKENCMLIDM
SKEKLEANVVGGDNATVSQLSQGYVVCKPSDRFRLLYTFIKKNQKKKIMV
FMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIF
CTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLR
PEETDFLSLLAKNKVPVTEFEFDESKMLPIQESYEKIVESNSALQHSAKS
GFTTFVRAYCSFSLSCFDVHKLDLAALAKTFGLKEPPHVMISVSGKSNPK
SNKRKKQVGMNSDDDNYFVPSKQKKFE*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003724RNA helicase activity
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0004386helicase activity
GO:0016787hydrolase activity
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR025313DUF4217
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 315..396
e-value: 1.7E-28
score: 110.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 289..396
e-value: 2.1E-26
score: 92.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 275..444
score: 19.636
IPR025313Domain of unknown function DUF4217SMARTSM01178DUF4217_3coord: 435..497
e-value: 2.3E-16
score: 70.4
IPR025313Domain of unknown function DUF4217PFAMPF13959DUF4217coord: 436..495
e-value: 3.7E-15
score: 55.9
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 41..236
e-value: 7.9E-46
score: 168.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 53..228
score: 28.051
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 46..213
e-value: 6.6E-47
score: 159.5
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 272..512
e-value: 2.6E-50
score: 173.3
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 17..228
e-value: 2.7E-71
score: 241.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..533
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 269..478
coord: 29..209
NoneNo IPR availablePANTHERPTHR24031:SF634ATP-DEPENDENT RNA HELICASE DDX18coord: 269..478
coord: 29..209
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 276..405
e-value: 5.29154E-57
score: 184.633
NoneNo IPR availableCDDcd17942DEADc_DDX18coord: 33..209
e-value: 3.54555E-88
score: 268.074
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 174..182
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 22..50
score: 10.425
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 94..413