Structural maintenance of chromosomes protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30003593 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 23
Homology
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Match: SMC3 (structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:HGNC:2468]) HSP 1 Score: 1142.1 bits (2953), Expect = 0.000e+0 Identity = 619/1222 (50.65%), Postives = 871/1222 (71.28%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V++ FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Match: SMC2 (structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]) HSP 1 Score: 94.7449 bits (234), Expect = 7.567e-19 Identity = 53/175 (30.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHI 3660 I+ ++ LD +K +A+ + +++V+ F IF L+P A L +G+ T+LD G+E G+ +++ +LSGGQ+SLVAL+LI ++ PAP Y+ DE+DAALD + + + M++ +QFI + + M A + KF + VS + Sbjct: 1015 ILTTIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQ---TVLD------------------GLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTV 1168
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Match: SMC2 (structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]) HSP 1 Score: 94.7449 bits (234), Expect = 7.567e-19 Identity = 53/175 (30.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHI 3660 I+ ++ LD +K +A+ + +++V+ F IF L+P A L +G+ T+LD G+E G+ +++ +LSGGQ+SLVAL+LI ++ PAP Y+ DE+DAALD + + + M++ +QFI + + M A + KF + VS + Sbjct: 1015 ILTTIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQ---TVLD------------------GLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTV 1168
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Match: SMC2 (structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]) HSP 1 Score: 94.7449 bits (234), Expect = 7.567e-19 Identity = 53/175 (30.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHI 3660 I+ ++ LD +K +A+ + +++V+ F IF L+P A L +G+ T+LD G+E G+ +++ +LSGGQ+SLVAL+LI ++ PAP Y+ DE+DAALD + + + M++ +QFI + + M A + KF + VS + Sbjct: 1015 ILTTIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQ---TVLD------------------GLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTV 1168
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Match: SMC4 (structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]) HSP 1 Score: 84.7297 bits (208), Expect = 1.055e-15 Identity = 177/696 (25.43%), Postives = 303/696 (43.53%), Query Frame = 1 Query: 1684 VQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRL--HARESVYPETNDAIPMMSRLTF--DAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKE-TVRAKH---EM--TFDKLKKDIY-LWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRE---SYQVELGTDLLTQLSTSEQREVDKLNETIQGLT---IKAKEAYTERM------CLEAEKTENETL--LDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQL----ENLRSQEKDYADSI-----QDDQQNXXXXXXXXXXXXXXXXXTLRKIR-----EIGSLPADALEKF-NDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVS----YNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 + G YG L +L D Y + L Y VV++ ++ + + + + N G F ++++ A++ +T + P + L D K + TLV +++ AT +A K+ + VTL G + + GT+TGG R+ + E E+ + E+ QN K+ + I E K+Q +E V+ +H EM T +K I L ++E++ + K + E + + D ++ K E +++ E D + + + + EV +L+ TI + +KA++ +++ C A + D NL + +D + E+ +T+ + + + EL++++++ K N++EE L E+Q+E R L +L EN + +KD A SI Q D E + + + +L I EI L + LE N ++ LL+ E+K N A+ ++ Y + +L K E D QA DL K Q+ + F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA I +K+AQFI + R M E ++R G+ Sbjct: 612 IPGIYGRLGDL-GAIDEKYDVAISSCCHALDYIVVDSIDIAQECVNFLKRQNI-GVATFIGLDKMAVWAKKMTEIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSLVIEISEEEVNKMESQLQN--DSKKAMQ--IQE--QKVQLEERVVKLRHSEREMRNTLEKFTASIQRLIEQEEYLNVQVK-ELEANVLATAPDKKKQKLLEENVSAFKTEY--DAVAEKAGKVEAEVKRLHNTIVEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTE--KEVDDLTAELKSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKD-ALSIKLKLEQIDGHIAEHNSKIKYWHKEISKISLHPIEDNPIEEISVLSPEDLEAIKNPDSITNQIALLEARCHEMKP----NLGAIAEYKKKEELYLQRVAELDKITYERDSFRQAYEDLRK----QRLNEFMAGFYIITNKLKENYQMLTLGGDAEL----------ELVDSLDPFSE----------GIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGI 1265 HSP 2 Score: 58.151 bits (139), Expect = 1.299e-7 Identity = 48/180 (26.67%), Postives = 78/180 (43.33%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPR-VVSAYVEIIFDNSDNR-------IPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGT 591 + I ++ Q F+SY + G F + I+G NGSGKSN ++ FV + ++ L+H + + S VE+ F ++ IP VS R + Y + K T DV NLL S G + +++ QG++ Q+A T D L+ L ++ G Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVS-RTACRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGC 260
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Match: smc-3 (Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]) HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0 Identity = 497/1229 (40.44%), Postives = 772/1229 (62.82%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRI-PFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDI---KRKLDE------IKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRL-KEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAI---KDKENTIRKLSDEIDSDIKR-IEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFRE--KFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHA-RESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETEN--VQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTG--GDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 M IK+V I GFRSY+D T F P N++VGRNGSGKSNFF AIQFVLSDEY+HL ++R+ LLHE TGP+V A VEI FDNS+ R+ F+ +EV + R +G KKDQY++D KMV + +V+NL+ESAGFSRSNPYYIVKQGKI +LAT+PD +LKLLREVAGTRVYDERKEES +I KE++ K ++I LL ID+RL+TLE+E ++LKEYQK D+ +RS+E+T++D K+ K KLDE KD +S +N D+ K D +KLE R LR KE +E + ++ + +N+ T +R G R A+ LQ V +I + ++ L+ IKP+Y +E + + E R KE+ AKQG+ +QF S RD++++ +++ ++ I K++E TI+K E+ +D++R E L NE+ ++ R E++ + + L+++ D +QT R+E ++ ++ N +++ LR I + + NG+ VR+VIE F+ + G V+ GYYGT+IEL PD F T+VEV A RLFYHVVE + + KIL++ N+ PGEINFFP+NR+ A R+ ++A PM + ++ ++ V ++ R+++ A +N FD V++DGDQ+S++G +TGG+ D++ S+LEL +K + E+ E + + + R+ ++ +I +++Q+ E +L + ++ + T K K+ +L +++ L ++ +E+++ E+G+++ +QL++ E++ V KL + + +T + RM L K E LL L + K+ L A + ++S+ + +L+ A +L ++ R+E+ +KQ+ ++ +L + + +++ L+ ++N+ Q++D D Q +K+ +K+ ++ +K+E++L+K+R +G+LP D K+ + ++L K L + E+K+Y +VNKKALDQ+++ + +KE+L KR E K +I +L+K L+++KYEAI LTFKQV F+++FK+LVP GR ++ +R + DDEE I VE + G+ + VSF GD++ ++M QLSGGQKSLVAL +IF+IQKCDPAPFYLFDEIDAALD Q+RK+VADMI+ LS AQF+TTTFRPE+L AE+FYGV+FRNKVSHID V++E+A DFVEDD THG Sbjct: 1 MKIKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVLSDEYAHLKEEQRLGLLHESTGPKVAHARVEITFDNSEKRLMAFENSEVKIVRQVGKKKDQYYIDNKMVPRAEVVNLMESAGFSRSNPYYIVKQGKINELATSPDAYKLKLLREVAGTRVYDERKEESLKILKETKMKTEKIQGLLKYIDERLQTLENEKEDLKEYQKLDKTKRSVEYTMYDNTNKEAIKEKTKLDEQKVELNQKDNNVKSQLN--DVIAEMAKLKTDKKKLESLGRGLREDKETLQAEETKMVEE-----KMTLKLEIDSLNEENTRERQG---RQNAEHSLQGVGDEIFKNEEELDTIKPEYAKLLEEESRLKTDIRIDESRAKEILAKQGQRSQFSSVDDRDKFLRNEIRRISGLIADNKEREETIQK---EL-ADVEREDEKLNNEIQSISRTIDENRYEMDTFAAKSTSLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAANDQLRRIVARPVYNGITGVRKVIEEFKHDNRNGQHDDVINGYYGTVIELAEVPDMFRTAVEVIAQNRLFYHVVETDRIATKILRKFNEMQLPGEINFFPMNRVSAPRQRDLSNNSNARPMSDVIDYEVQYDKVFKSITANVIIVRTLDQAARDLRNEGFDVVSVDGDQMSKKGVMTGGFIDKKRSKLELHTQKDRFTKELAELQKSLAEAEKMVRERTQEA--EKIRNRMQQHENQIGDFHRKHRELTEAKNAISQQFYMVTSTKEPKKDQLLGIKNHLRELLAQKENFEQEIGSNMSSQLTSDEEQTVKKLRKKVDEMTKQLATVSRRRMDLMHRKNAIENLLTKKLYKTKESLTARVDDISDNERRHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKALQINIDNVLEQQRDLEKQQADFQLQYDKITAKEDEVKQKREDSLKKMRLLGALPTDTFSKWQNVKPRELEKKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAEQKKSEDSIEELLKVLENRKYEAIDLTFKQVKKNFEQVFKQLVPHGRGKMQMRAREQ----RDDEE----GINSVELYEGISVLVSFVSDDGDSETREMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMIQSLSDQAQFVTTTFRPELLATAEKFYGVRFRNKVSHIDSVTREQAYDFVEDDTTHG 1205
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Match: smc-3 (Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]) HSP 1 Score: 292.352 bits (747), Expect = 3.415e-89 Identity = 163/337 (48.37%), Postives = 242/337 (71.81%), Query Frame = 1 Query: 2713 IEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTG--GDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 +E+ +KQ+ ++ +L + + +++ L+ ++N+ Q++D D Q +K+ +K+ ++ +K+E++L+K+R +G+LP D K+ + ++L K L + E+K+Y +VNKKALDQ+++ + +KE+L KR E K +I +L+K L+++KYEAI LTFKQV F+++FK+LVP GR ++ +R + D DEE I VE + G+ + VSF GD++ ++M QLSGGQKSLVAL +IF+IQKCDPAPFYLFDEIDAALD Q+RK+VADMI+ LS AQF+TTTFRPE+L AE+FYGV+FRNKVSHID V++E+A DFVEDD THG Sbjct: 1 MESTRKQLATAISELQDYETKEKALQINIDNVLEQQRDLEKQQADFQLQYDKITAKEDEVKQKREDSLKKMRLLGALPTDTFSKWQNVKPRELEKKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAEQKKSEDSIEELLKVLENRKYEAIDLTFKQVKKNFEQVFKQLVPHGRGKMQMRAREQRD----DEE----GINSVELYEGISVLVSFVSDDGDSETREMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMIQSLSDQAQFVTTTFRPELLATAEKFYGVRFRNKVSHIDSVTREQAYDFVEDDTTHG 329
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Match: smc-3 (Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]) HSP 1 Score: 284.648 bits (727), Expect = 1.194e-78 Identity = 147/267 (55.06%), Postives = 197/267 (73.78%), Query Frame = 1 Query: 2923 IREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTG--GDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 +R +G+LP D K+ + ++L K L + E+K+Y +VNKKALDQ+++ + +KE+L KR E K +I +L+K L+++KYEAI LTFKQV F+++FK+LVP GR ++ +R + D DEE I VE + G+ + VSF GD++ ++M QLSGGQKSLVAL +IF+IQKCDPAPFYLFDEIDAALD Q+RK+VADMI+ LS AQF+TTTFRPE+L AE+FYGV+FRNKVSHID V++E+A DFVEDD THG Sbjct: 1003 MRLLGALPTDTFSKWQNVKPRELEKKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAEQKKSEDSIEELLKVLENRKYEAIDLTFKQVKKNFEQVFKQLVPHGRGKMQMRAREQRD----DEE----GINSVELYEGISVLVSFVSDDGDSETREMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMIQSLSDQAQFVTTTFRPELLATAEKFYGVRFRNKVSHIDSVTREQAYDFVEDDTTHG 1261
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Match: mix-1 (Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]) HSP 1 Score: 107.457 bits (267), Expect = 4.384e-23 Identity = 69/227 (30.40%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS----DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRI-PFDK---TEVSLRRIIGNKKD------QYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELL-SSIDDRLRTLESETKELKE 732 M+IK + + GF+SY+ T +F P N I G NGSGKSN +I F++ D S E I+ H GT A V++ FDN+D R PF E+ ++RII + Y L+ T + + G + +NP++++ QG+IT + + L ++ E AGT++YD++K+++++ +AK+ +++ + SSID R+ + K + E Sbjct: 1 MHIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAKSMHELIS--HGGT-----KAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSYTLNGHAATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEEILGMVEEAAGTKMYDQKKKDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVE 220 HSP 2 Score: 93.2041 bits (230), Expect = 7.924e-19 Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 3148 MKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKD-MNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKF 3639 + LD +K + ++ + V+ F +IF L+PD A L+ +GK ++ E G+ ++VSF G +KD +++LSGGQ+SLVAL+LI A+ K PAP Y+ DE+DAALD + + MIK QFI + + M A+ + +F Sbjct: 1034 IATLDKKKVDELIRAHESVNKDFGQIFNCLLPDAHASLVPPEGK--------------TVCE-----GLEVKVSFGG---VVKDSLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQFIIVSLKQGMFSNADVLFQTRF 1176
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Match: smc-4 (Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]) HSP 1 Score: 75.8702 bits (185), Expect = 1.950e-13 Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 3355 GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 GI K + LSGG+K+L +L LIFA+ P PFY+ DEIDAALD + +A ++ +++AQFI + R M E A R G+ Sbjct: 1260 GISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGI 1352 HSP 2 Score: 58.151 bits (139), Expect = 5.002e-8 Identity = 39/153 (25.49%), Postives = 68/153 (44.44%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPR----VVSAYVEIIFDNSDNRIPFDKTEVSLRRI-IGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA 540 + I+ V + F+SY + G F I+G NGSGKSN ++ FV S + + NL+H+ G V+ + + I D + +E ++ R N Y +D + TK +V L + +++ QG++ Q+A Sbjct: 90 LMIRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAKVSNLIHKSAGRNPDKCTVTIHFQRIVDIPGHYEVVKDSEFTISRTAFQNNSSSYAIDGRPATKNEVEARLRRVDIDIEHNRFLILQGEVEQIA 242
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Fly
Match: SMC3 (gene:FBgn0015615 transcript:FBtr0074290) HSP 1 Score: 1017.3 bits (2629), Expect = 0.000e+0 Identity = 563/1211 (46.49%), Postives = 837/1211 (69.12%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSS----VNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 M+IK++IIQGF+SY+DQT FD HN++VGRNGSGKSNFF AIQFVLSDE++HL P++R +LLHEGTG RV+SAYVEIIFDNSDNR+P DK E+ LRR+IG KKDQYFL+KK+V + +V+NLLESAGFS SNPYYIVKQGKI Q+ATA D+ RLKLLREVAGTRVYDERKEES + +E+++K+++I+E L +I+DRL+TLE E +ELKEYQK D+ RR+LE+ ++ ELKD K+ LDE++ +R+ SS + ++++KA +K D ++++ ++ + K +E + + + L+ + +L L + D +G ++ RA ++L+ + + I + +K L+++KP+YE + KE++ L E +RKEL+AKQGR +QF SR RD+WI ++KS++K +DK KL +++ D +DL ++ + +E +R +++ +++ +L++ KD+ Q+ R ++R+E+++ QQL ++EL+R + LRS+ GK ILNG DSVR+V++ F E+ G + + YYG +IE +C T YT+VEVTA RLF+H+VE+E +IL+E+NK PGE+ F P+NRL + YP+ D+IPM+S+L +D + + + FGKTL+CR++E AT LAK+ DCVTLDGDQVS +G+LTGGY++ SRLE+QK++ + +I E E + ++ IN I+ ++Q+ ET + K + F+K++ +I L KEE + + KE L + LE M T+ S + EL +L++ LS+ +QRE+D+LN+ I+ L + KEA+T+RM E K + + LL +NL R++D+L + E+S D +L + EL + ++RI+ + E+++ E + ++ L+ +LE +EK+ +++ D + LEK +K++ L +K +E KI +G++P + ++K ++K L+KAN+ +K+Y+HVNKKALDQF+S++E+KEKL +RKEELD G Q I L+++L+ QK EAI TF+QV+ F ++FKKLVP G LI++ ++ ++ E + S + FTG+GI VSFTG +A+M++MNQLSGGQKSLVAL LIF+IQKCDPAPFYLFDEID ALD +RKAVA+MI LS AQFITTTFRPE+LE A +FYGV+FRNKVSHID V++EEA DFVEDD TH Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQRQSLLHEGTGARVISAYVEIIFDNSDNRVPIDKEEIFLRRVIGAKKDQYFLNKKVVPRNEVVNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNLLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLEYIRYETELKDTKKALDELQLQRKSSSDKKKIYNIEIQKAQEKIKD----VQKNLKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQLKEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQTRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHKEELSRADQALRSMAGKPILNGCDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPGEVTFMPLNRLQVKIHDYPDDPDSIPMISKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGLDCVTLDGDQVSSKGSLTGGYFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLSSQDQREIDQLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLINNLFRRRDELIQALQEISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLGAVPL-VDPSYTRMSLKNIFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHMLIQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDNEGDEMEKEVENSDA------FTGIGIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVANMIHELSDTAQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTREEAKDFVEDDSTHA 1200
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Fly
Match: SMC1 (gene:FBgn0040283 transcript:FBtr0084541) HSP 1 Score: 105.531 bits (262), Expect = 2.177e-22 Identity = 169/735 (22.99%), Postives = 321/735 (43.67%), Query Frame = 1 Query: 94 TMYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGT--GPRVVSAYVEIIFD-NSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRV----YDERKEE--------------SKQIFKE-SEAKMDQINELLSSIDDRLRTLESETKELK-EYQ-----KCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQ----MKSLNKAIKDKENTI--------------RKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRR-----VIEIFREKFGSDCHVVQGYYGTLIELINCPDT---FYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDA-KF-----QNVMLHNFGKTLVCRSIEIATTLAKNLN---FDCVTLDGDQVSRRGTLTGGYYD 2109 T +++ + ++ F+SYR G N ++G NGSGKSNF AI FV+ ++ S L + +L+H + P S YV F N + + F R +IG +Y ++ + V+ + +N LE G + ++V QG + +A +R L E++G+ + Y+ K+E K I E EAK +++ DR L++E E + EYQ +RD R F +L+ ++++ ++ R+E + + +K A K D+ K++++ R+ E QM ++ + EK+ ++ + + T R NA + L++ + ++ ++KR EDE+ N +++ R K + ++G V ++ Q E Q + S+N+ K +++T+ +KL+ + + +KR + L++ + ++A +E + R KDE++ D T + ++ Q++L ++RD+L G + + + RR V+E+F+++ V G Y +I + C T + +V G + +V+ E+ +Q + + E F P++ L + N + P RL FD KF + +L G LVC + E A +A ++ FD + LDG + G ++GG +D Sbjct: 24 TAFLEYIEMENFKSYRGHIVVGPL-KQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHGSSIGKPVSRSCYVTAKFVLNEERHMDFQ------RAVIGG-SSEYRINGESVSSSTYLNKLEKIGINVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERKEAKHEKMEA------DRYTRLQNEYNEKQVEYQLFRLFHVERDIRK-----FTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREF---ETQM-NKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADNAHQSDIRKLEKQLADVEALKKRF-------------EDEIEN---ESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKLMDHIKSSQAALE--------------EQNRIKDELRRDVGTSKEKIAEKQRELEDVRDQL-----------GDAKSDKHEDARRKKKQEVVELFKKQ-------VPGVYDRMINM--CQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVE-TFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHD 684 HSP 2 Score: 71.2478 bits (173), Expect = 5.135e-12 Identity = 43/151 (28.48%), Postives = 67/151 (44.37%), Query Frame = 1 Query: 3181 IVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 V + +S I+KKL + A+ I ++ LD GI + + + MN LSGG+K++ AL L+F+ PAPF++ DEIDAALD VA I+ + + Q I + + E A+ G+ Sbjct: 1083 FVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYLD------------------GINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNIGKVASYIRDHTTNLQTIVISLKEEFYGHADALVGI 1215
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Fly
Match: SMC2 (gene:FBgn0027783 transcript:FBtr0087461) HSP 1 Score: 86.2705 bits (212), Expect = 1.354e-16 Identity = 53/161 (32.92%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 3199 QVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHID-QVSKE 3678 +V+ F IF L+P A+L H + L TG+ I+V F G + + +LSGGQKSLVAL+L+ A+ K PAP Y+ DE+DAALD + + + M+K ++QF+ + + + A + F VS I QVS++ Sbjct: 1034 EVNTNFSGIFSSLLPGAEAKL---NPVHTNGCL----------------TGLEIKVGFNG--IWKESLGELSGGQKSLVALSLVLAMLKFSPAPLYILDEVDAALDMSHTQNIGSMLKQHFTNSQFLIVSLKDGLFNHANVLFRTLFEEGVSTITRQVSRQ 1173 HSP 2 Score: 62.3882 bits (150), Expect = 3.179e-9 Identity = 44/162 (27.16%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 1684 VQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRL-----------HARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDC--VTLDGDQVSRRGTLTGGYYDQRFSRLE 2130 V+G G L ++ + ++ ++ TAG L+ +V +++ KILQ + N + PIN++ +A+ V E + MS + +D ++ VM FG TL+C+ + +A ++ + +C VTL+GD V GT++GG + + LE Sbjct: 520 VRGLVGKLFQVKDMQNSM--ALVQTAGGSLYSYVTDDDVTSKKILQ---RGNLQRRVTLIPINKIQSGSLNRNVVEYAQNKVGAE--NVQWAMSLIDYDRYYEPVMKFCFGGTLICKDLIVAKQISYDPRINCRSVTLEGDVVDPHGTVSGGAAPKGANVLE 674
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Fly
Match: glu (gene:FBgn0015391 transcript:FBtr0080935) HSP 1 Score: 75.8702 bits (185), Expect = 2.624e-13 Identity = 49/156 (31.41%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 3166 QKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 ++Y+ + F ++ +E+++ + G AEL L D DP FT G+ + K ++ LSGG+K+L +L L+FA+ P+P Y DEIDAALD + V IK +K+AQFI + R M E A G+ Sbjct: 1145 RRYKEFMDGFSIITRKLKEMYQMITLGGDAEL----------ELVDSMDP---------FTE-GVNFTVRPPKKSWKYISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKNVSIVGHYIKERTKNAQFIIVSLRVNMFELANFLVGI 1280 HSP 2 Score: 56.9954 bits (136), Expect = 1.404e-7 Identity = 53/227 (23.35%), Postives = 100/227 (44.05%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTG-PRVVSAYVEIIF-------DNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATA-PDNQR------LKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKE 732 + I K++ + F+SY + G F I+G NGSGKSN ++ FV + + + L+H + P + S V + F D + +P D + V R + + Y ++ K DV LL+ + +++ QG++ +A P Q L+ L ++ GT+ Y ++ Q ++DQ+ + + +R + E E K+L++ Sbjct: 87 LIISKIVNRNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVSTLIHSSSSYPNLRSCSVAVHFKQIVDKGDGTCEDVP-DSSIVIERTAMSDNSSYYQINDKRAQLKDVAKLLKKHHVDLEHNRFLILQGEVESIAMMKPKGQTENETGMLEYLEDIVGTQRYIRPLQQINQ-------RVDQLTDDRTEKHNRCKLAEREMKDLEQ 305
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Match: smc3 (structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]) HSP 1 Score: 1130.16 bits (2922), Expect = 0.000e+0 Identity = 618/1221 (50.61%), Postives = 867/1221 (71.01%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSS---------IPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE + +R A + D +E+ ER R+L+ + M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L+E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ + E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ C FYT VEVTAGTRLFYH+VE +E+ KIL E NK N PGE+ F P+++L R++ YPETNDAIPM+S+L + F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +QR VD LN+ I+ L ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL I++RI+ + + + + + E + + +E ++ EK+ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ T+KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR++ELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + DE + S +P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID +S E+A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEQNKERNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAYPETNDAIPMISKLRYSQNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNI----ETINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDTLIDKTEVEIKEHQKSMERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERASSSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVISAEQAKDFVEDDTTHG 1216
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Match: smc3 (structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]) HSP 1 Score: 1013.06 bits (2618), Expect = 0.000e+0 Identity = 564/1151 (49.00%), Postives = 807/1151 (70.11%), Query Frame = 1 Query: 295 EGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSS---------IPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 EGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE + +R A + D +E+ ER R+L+ + M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L+E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ + E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ C FYT VEVTAGTRLFYH+VE +E+ KIL E NK N PGE+ F P+++L R++ YPETNDAIPM+S+L + F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E + + +N+ + +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +QR VD LN+ I+ L ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL I++RI+ + + + + + E + + +E ++ EK+ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ T+KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR++ELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + DE + S +P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID +S E+A DFVEDD THG Sbjct: 16 EGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEQNKERNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAYPETNDAIPMISKLRYSQNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENFSS---PINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDTLIDKTEVEIKEHQKSMERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERASSSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVISAEQAKDFVEDDTTHG 1162
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Match: smc2 (structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]) HSP 1 Score: 94.3597 bits (233), Expect = 6.999e-19 Identity = 52/182 (28.57%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGV--GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSK 3675 I++ ++ LD +K EA+ + +++V+ F IF L+P A L +G GV G+E G+ +++ +LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ +QF+ + + M A + KF + +S + + ++ Sbjct: 1015 ILETIEELDQKKNEALNVAWQKVNKDFGSIFSTLLPGANARLAPPEG-----------------------CGVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFVVVSLKDGMFTNANVLFKTKFVDGISTVTRTAQ 1173 HSP 2 Score: 65.4698 bits (158), Expect = 5.110e-10 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 1684 VQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHAR-----------ESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRL 2127 V+G L + + + T++EV AG RL+ VV+NE K+L+ K P+N++ AR + V P ++ +S + ++++ + M + FG TLVC S++ A +A K ++ VTL GD +GTLTGG Q S L Sbjct: 522 VKGLVANLFTVTDVSNA--TALEVVAGGRLYNVVVDNEVTGKKLLE---KGELRRRYTIIPLNKISARTLNDNVVRTAKKLVGP--DNVHTALSLVGYESELRKAMEYVFGTTLVCDSLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVL 675
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Match: smc2 (structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]) HSP 1 Score: 94.3597 bits (233), Expect = 6.999e-19 Identity = 52/182 (28.57%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGV--GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSK 3675 I++ ++ LD +K EA+ + +++V+ F IF L+P A L +G GV G+E G+ +++ +LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ +QF+ + + M A + KF + +S + + ++ Sbjct: 1015 ILETIEELDQKKNEALNVAWQKVNKDFGSIFSTLLPGANARLAPPEG-----------------------CGVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFVVVSLKDGMFTNANVLFKTKFVDGISTVTRTAQ 1173 HSP 2 Score: 65.4698 bits (158), Expect = 5.110e-10 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 1684 VQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHAR-----------ESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRL 2127 V+G L + + + T++EV AG RL+ VV+NE K+L+ K P+N++ AR + V P ++ +S + ++++ + M + FG TLVC S++ A +A K ++ VTL GD +GTLTGG Q S L Sbjct: 522 VKGLVANLFTVTDVSNA--TALEVVAGGRLYNVVVDNEVTGKKLLE---KGELRRRYTIIPLNKISARTLNDNVVRTAKKLVGP--DNVHTALSLVGYESELRKAMEYVFGTTLVCDSLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVL 675
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Match: smc4 (structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]) HSP 1 Score: 77.7962 bits (190), Expect = 7.903e-14 Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 3157 LDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 L Q+ + F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA I +K+AQFI + R M E A+R G+ Sbjct: 1126 LRKQRLHEFMAGFNIITNKLKENYQMLTLGGDAEL----------ELVDSLDPFSE----------GIMFSVRPPKKSWKKIYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADRLIGI 1264
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Match: cryba4 (crystallin beta A4 [Source:Xenbase;Acc:XB-GENE-998932]) HSP 1 Score: 1104.74 bits (2856), Expect = 0.000e+0 Identity = 605/1225 (49.39%), Postives = 853/1225 (69.63%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETE---------NVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 Y +VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+ + K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+V+++E+ KIL E N+ N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E E+ E N++ K +++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EK++ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL L + R++ A+DQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DFVEDD THG Sbjct: 13 YSFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREFKSKISAMKEEKEQLSSERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNRMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIENILCEHKYSYTCDSEPLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDGTIDKTEVEIKDLVKSMDRWKNMEKEHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLMGPLPPSVRQL--------SAMDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAEGERGSGAHSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKDFVEDDTTHG 1228
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Match: cryba4 (crystallin beta A4 [Source:Xenbase;Acc:XB-GENE-998932]) HSP 1 Score: 1103.2 bits (2852), Expect = 0.000e+0 Identity = 611/1236 (49.43%), Postives = 859/1236 (69.50%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKME-----MEIQETENVQQN-----------YITRKEVLDSGINEIIDKL----QRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 Y +VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+ + K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+V+++E+ KIL E N+ N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E +E + EN+++N Y E L + IN ID+L Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EK++ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQ + +D + + A+DQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DFVEDD THG Sbjct: 13 YSFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREFKSKISAMKEEKEQLSSERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNRMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIENILCEHKYSYTCDSEPLAARINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDGTIDKTEVEIKDLVKSMDRWKNMEKEHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQ-WGAVDCSTDWL--------SAMDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAEGERGSGAHSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKDFVEDDTTHG 1238
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Match: cryba4 (crystallin beta A4 [Source:Xenbase;Acc:XB-GENE-998932]) HSP 1 Score: 1086.25 bits (2808), Expect = 0.000e+0 Identity = 590/1225 (48.16%), Postives = 829/1225 (67.67%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETE---------NVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 Y +VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+ + K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+V+++E+ KIL E N+ N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E E+ E N++ K +++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EK++ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQ + L K E+ R G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DFVEDD THG Sbjct: 13 YSFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREFKSKISAMKEEKEQLSSERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNRMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIENILCEHKYSYTCDSEPLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDGTIDKTEVEIKDLVKSMDRWKNMEKEHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQQKEKLIKRQEELDR-------------------------------GYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAEGERGSGAHSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKDFVEDDTTHG 1205
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Match: cryba4 (crystallin beta A4 [Source:Xenbase;Acc:XB-GENE-998932]) HSP 1 Score: 1068.53 bits (2762), Expect = 0.000e+0 Identity = 596/1215 (49.05%), Postives = 841/1215 (69.22%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKME-----MEIQETENVQQN-----------YITRKEVLDSGINEIIDKL----QRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVS 3654 Y +VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+ + K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+V+++E+ KIL E N+ N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E +E + EN+++N Y E L + IN ID+L Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EK++ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQ + +D + + A+DQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNK S Sbjct: 13 YSFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREFKSKISAMKEEKEQLSSERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNRMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIENILCEHKYSYTCDSEPLAARINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDGTIDKTEVEIKDLVKSMDRWKNMEKEHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQ-WGAVDCSTDWL--------SAMDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAEGERGSGAHSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKES 1217
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Match: cryba4 (crystallin beta A4 [Source:Xenbase;Acc:XB-GENE-998932]) HSP 1 Score: 1053.12 bits (2722), Expect = 0.000e+0 Identity = 584/1204 (48.50%), Postives = 831/1204 (69.02%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETE---------NVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVS 3654 Y +VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+ + K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+V+++E+ KIL E N+ N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E E+ E N++ K +++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EK++ ++I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQ + +D + + A+DQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYG FR +S Sbjct: 13 YSFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREFKSKISAMKEEKEQLSSERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEDTEANKEKNLEQYTKLDQDLSEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNRMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNHRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIENILCEHKYSYTCDSEPLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDGTIDKTEVEIKDLVKSMDRWKNMEKEHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQ-WGAVDCSTDWL--------SAMDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAEGERGSGAHSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYG--FRGLLS 1204
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Match: Smc3 (structural maintenance of chromosomes 3 [Source:MGI Symbol;Acc:MGI:1339795]) HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0 Identity = 620/1222 (50.74%), Postives = 871/1222 (71.28%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Match: Smc2 (structural maintenance of chromosomes 2 [Source:MGI Symbol;Acc:MGI:106067]) HSP 1 Score: 133.65 bits (335), Expect = 5.766e-31 Identity = 178/709 (25.11%), Postives = 320/709 (45.13%), Query Frame = 1 Query: 1699 GTLIELINCPD-TFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPET-----NDAIP-----MMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRL-----------ELQKRKQKM---EMEIQETENVQQNYITRKEVLDSGINEIIDKLQRK--ETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRES--YQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLD---HNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADA--LEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 G + LIN D + T++EV AG RL+ VV+ E K+L+ K P+N++ AR + PET N P +S + + + Q M FG T VC +++ A +A K + VTL GD GTL+GG Q S L EL+ ++ ++ E E+ +NV + Y K+ + E D LQ K ++ K + D LKK I +E + E + + E K +L + ++ + RE + D + + +++ + + ++ +T++ +E L+ E NE LD + + Q+E EV++ E + +A+DEL + I A Q N ++K AEV K L+ L+ +E D++ S + + + + + + + + P A + N K Q + L + ++ R +VN +A++ E L+K+K ++ I+ ++ LD +K +A+ + +++V+ F IF L+P A L +G+ T+LD G+E G+ +++ +LSGGQ+SLVAL+LI ++ PAP Y+ DE+DAALD + + + M++ +QFI + + M A + KF + VS + + ++ +A ++ ++ G Sbjct: 524 GLVASLINVKDNSTATALEVVAGERLYNVVVDTEVTAKKLLE---KGELKRRYTIIPLNKISAR-CIAPETLRVAQNLVGPDNVHVALSLVDYKPELQKGMEFVFGTTFVCNNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQEVKDVQDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEG-DLLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEE-------LKREHASNEQQLDAVNEAIKAYEGQIEKMAAEVAKNK--ESVNKAQDELMKQKQIITA---QDNIIKDKCAEVA--KHNLQNNESQLKIKELDHSIS---KHKREADDAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEKLGR--NVNLRAMNVLTEAEERYNDLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQ---TVLD------------------GLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQSQAGKIPKEAKSRG 1187
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Match: Smc2 (structural maintenance of chromosomes 2 [Source:MGI Symbol;Acc:MGI:106067]) HSP 1 Score: 133.65 bits (335), Expect = 5.766e-31 Identity = 178/709 (25.11%), Postives = 320/709 (45.13%), Query Frame = 1 Query: 1699 GTLIELINCPD-TFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPET-----NDAIP-----MMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRL-----------ELQKRKQKM---EMEIQETENVQQNYITRKEVLDSGINEIIDKLQRK--ETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRES--YQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLD---HNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADA--LEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 G + LIN D + T++EV AG RL+ VV+ E K+L+ K P+N++ AR + PET N P +S + + + Q M FG T VC +++ A +A K + VTL GD GTL+GG Q S L EL+ ++ ++ E E+ +NV + Y K+ + E D LQ K ++ K + D LKK I +E + E + + E K +L + ++ + RE + D + + +++ + + ++ +T++ +E L+ E NE LD + + Q+E EV++ E + +A+DEL + I A Q N ++K AEV K L+ L+ +E D++ S + + + + + + + + P A + N K Q + L + ++ R +VN +A++ E L+K+K ++ I+ ++ LD +K +A+ + +++V+ F IF L+P A L +G+ T+LD G+E G+ +++ +LSGGQ+SLVAL+LI ++ PAP Y+ DE+DAALD + + + M++ +QFI + + M A + KF + VS + + ++ +A ++ ++ G Sbjct: 524 GLVASLINVKDNSTATALEVVAGERLYNVVVDTEVTAKKLLE---KGELKRRYTIIPLNKISAR-CIAPETLRVAQNLVGPDNVHVALSLVDYKPELQKGMEFVFGTTFVCNNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQEVKDVQDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEG-DLLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEE-------LKREHASNEQQLDAVNEAIKAYEGQIEKMAAEVAKNK--ESVNKAQDELMKQKQIITA---QDNIIKDKCAEVA--KHNLQNNESQLKIKELDHSIS---KHKREADDAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEKLGR--NVNLRAMNVLTEAEERYNDLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQ---TVLD------------------GLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQSQAGKIPKEAKSRG 1187
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Match: Smc2 (structural maintenance of chromosomes 2 [Source:MGI Symbol;Acc:MGI:106067]) HSP 1 Score: 122.479 bits (306), Expect = 1.276e-28 Identity = 73/227 (32.16%), Postives = 126/227 (55.51%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS-DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNR---IPF---DKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELL-SSIDDRLRTLESETKELKEYQKCDRD 753 MY+K +I++GF+SY +T FDP N I G NGSGKSN +I F+L S + +L+++ + A V I FDNSD + + F D+ V+ + +IG + ++Y ++ T V +L S G + +NP++++ QG+IT++ + L ++ E AGTR+Y+ +K +++ ++ EAK+ +I +L I ++ L+ E EYQK R+ Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGR-NKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMRE 226
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Match: Smc4 (structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]) HSP 1 Score: 77.0258 bits (188), Expect = 1.584e-13 Identity = 56/168 (33.33%), Postives = 77/168 (45.83%), Query Frame = 1 Query: 3130 QAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 QA DL K Q+ + F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA I +K+AQFI + R M E ++R G+ Sbjct: 1095 QAYEDLRK----QRLNEFMAGFYVITNKLKENYQMLTLGGDAEL----------ELVDSLDPFSE----------GIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGI 1238 HSP 2 Score: 59.6918 bits (143), Expect = 2.626e-8 Identity = 149/722 (20.64%), Postives = 311/722 (43.07%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPR-VVSAYVEIIFDNSDNR-------IPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGT-RVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRE-------LKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGR--------VNQFQSRTQ---RDEWIKE-QMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRT---EHNLRSIT---------GKSILNGLDSVRRVIE-IFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRL--HARESVYPETNDAIPMMSRL--TFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGG 2100 + I ++ Q F+SY + G F + I+G NGSGKSN ++ FV + ++ L+H + + S VE+ F ++ +P VS R + Y + K T DV NLL S G + +++ QG++ Q+A T D L+ L ++ G R+ + K +++ +E + +++N R++ +E E L+ + + +LE +F ++ + D++ ++ EI ++E+ +T ++ + + +++++ +D+ K ++ +EQ N K T+ + + R + L+ K ++++K+L++ K + E ++ + +++ R L ++ + ++ + TQ +++ I+E ++ NK++ + + + E+D + R V++LS A ++ L SE L+ E +A + + + + QQ+L EL + E NL+S+ KS L S +V++ I +EK + G YG L +L D Y + L Y VV++ + + + + KHN G F ++++ A++ +T + P + L + + + TLV +++ AT +A ++ + VTL G + + GT++GG Sbjct: 55 LMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVS-RTAYRDSTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLN--------RVKMVEKEKDALEGEKNIAIEFLTLENEMFKKKNHICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKVTKFIEQ-------------------NKEKFTQLDLEDVQVREK--LKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQEKELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKA-------KEALITASETLK-------ERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGR---IPGIYGRLGDL-GAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHNI-GIATFIGLDKMTVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLDQATRVAYQRDRRWRVVTLQGQIIEQSGTMSGG 727
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Match: sp|O93309|SMC3_XENLA (Structural maintenance of chromosomes protein 3 OS=Xenopus laevis OX=8355 GN=smc3 PE=1 SV=2) HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0 Identity = 626/1210 (51.74%), Postives = 876/1210 (72.40%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETE-NVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS--SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K D+INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E++ER R+L+ K M +E EQ+ S E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I ++ +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ +C FYT VEVTAG RLFYH+VE++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK +K+E E+ E + +N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + E + L ++ ++ EKD+ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+GH++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG A+M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKRDKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKSKISAMKEEKEQLSSERQEQIKQRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEESGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDLEETEVNKEKNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQQSLAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFDCEPAFYTCVEVTAGNRLFYHIVESDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNLRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDITIDKTEVESKDLVKSMDRWKNMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGHKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTQSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKDFVEDDTTHG 1209
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Match: sp|Q9CW03|SMC3_MOUSE (Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2) HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0 Identity = 620/1222 (50.74%), Postives = 871/1222 (71.28%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Match: sp|Q5R4K5|SMC3_PONAB (Structural maintenance of chromosomes protein 3 OS=Pongo abelii OX=9601 GN=SMC3 PE=2 SV=1) HSP 1 Score: 1142.1 bits (2953), Expect = 0.000e+0 Identity = 619/1222 (50.65%), Postives = 871/1222 (71.28%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V++ FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Match: sp|Q9UQE7|SMC3_HUMAN (Structural maintenance of chromosomes protein 3 OS=Homo sapiens OX=9606 GN=SMC3 PE=1 SV=2) HSP 1 Score: 1142.1 bits (2953), Expect = 0.000e+0 Identity = 619/1222 (50.65%), Postives = 871/1222 (71.28%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V++ FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DE + S SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Match: sp|O97594|SMC3_BOVIN (Structural maintenance of chromosomes protein 3 OS=Bos taurus OX=9913 GN=SMC3 PE=1 SV=1) HSP 1 Score: 1137.48 bits (2941), Expect = 0.000e+0 Identity = 617/1223 (50.45%), Postives = 870/1223 (71.14%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGK---------HDDTLLDDE--EDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE S + +R A + D +E +ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + + +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V++ FR K G + HV GY+G ++ C FYT VEVTAG RLFYH+V+++E+ KIL E NK N PGE+ F P+N+L R++ YPETNDAIPM+S+L ++ +F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +Q+ VD LN+ I+ L + ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL AI++R++ + + + + + + L+ +E ++ EK++ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ ++KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR+EELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++K + + ++ E P SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRK-GINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKRRXERQSGLRMKEKGVVKGERGSGPQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG 1218
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Match: A0A5K4F4P2 (Putative rootletin (Ciliary rootlet coiled-coil protein) OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 1749.95 bits (4531), Expect = 0.000e+0 Identity = 902/1210 (74.55%), Postives = 1054/1210 (87.11%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDP---SSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIKKVIIQGFRSYRDQTCP EF PHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLS QER NLLHEGTGPRV+SAYVE+IFDNSDNRIPFDK EVSLRRIIG+KKDQYFLDKKMVTK DVMN+LESAGFSRSNPYYIVKQGKITQLATAPD+QRLKLLREVAGTRVYDERKEESKQIFKESEAK +QI+ELL+SI+DRLRTLE+ETKELKEYQ DRDRR+LEFTI+DRELK+ ++KL+EI+ RREQSS +T ++R+AAK CAD IEKLERD RD RLKE QM DEVEQ+Q+ +S+ LQRREQLQL + DY T RGG +AR RA ++L RV +I QV++RL E++PQY+ A+ EDE+ N+LSDAEHRRKELFAKQGRVNQFQSR+QRDEWIK+QMKSL+KAIKDKENTI KL++EI D +R E L +L AE NM VR+ELE VSEE R+LRR+KDE+Q DRQTVYR+E+++ +LNNLRDEL RTEHNLRSITGK ILNGLDSVR+V+EIFR+++G DC +VQGY+GTLIELI+CP+TFYTSVEVTAG+RLFYHVV+N++LVI+++ E+NKHN PGE+NF PINRL +ES YPETNDAIPM+SRL FD KF+ VMLH FGKTL+CRSIEIAT LA+ NFDC+TLDGDQVSR+GTLTGGYYD R SRLELQKRKQK E+EIQETENV++N RKE +D+ IN IID +QRK+TVR+KHEMTFDKLKKDI++WKEE K E KPQKE+KL+SLRHDL+QMKYT ESY+VELGTDLL+QLS EQREVD+LN+ IQ LT +AK+AY +R+ LE EK E ET L+HNL+RK++QLE+E+ E SE D+ +RL E+E+ELR ++ IE Q+ V+ E +L+ + E+R+LE+++E + +EK+YA+ IQDDQQNLEKMQSKQSQLLKKKEE ++KIR++GSLPA+ +KF DK MKQL+KLLDKANRE+KRYSHVNKKALDQFVS++EEKEKLLKRKEELDKG QAI DLM ALDHQKYEAI LTFKQVS FQ+IFK+LVP+GRAEL+++KG + +ED SS IP+VERF GVGI VSFTG A M+DMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD QYRKAVADMIK L +AQFITTTFRPE+LE+AE+FYGVKFRNKVSHI+ V+K EALDFVEDDQTHG Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSNQERQNLLHEGTGPRVISAYVEMIFDNSDNRIPFDKNEVSLRRIIGSKKDQYFLDKKMVTKADVMNMLESAGFSRSNPYYIVKQGKITQLATAPDHQRLKLLREVAGTRVYDERKEESKQIFKESEAKREQISELLNSIEDRLRTLENETKELKEYQHWDRDRRALEFTIYDRELKETRKKLEEIQTRREQSSESTAEIRRAAKDCADAIEKLERDLRDNRLKEAQMQDEVEQVQASVSDVLQRREQLQLTIADYSATLRGGKSARERASEELSRVREQINQVERRLAELRPQYKKAKQFEDELANALSDAEHRRKELFAKQGRVNQFQSRSQRDEWIKDQMKSLSKAIKDKENTINKLTEEIKRDDERREKLQQDLEVAEENMTCVRKELETVSEEQRRLRREKDEIQTDRQTVYREETRIAHELNNLRDELARTEHNLRSITGKGILNGLDSVRKVVEIFRDRYGPDCDIVQGYHGTLIELIDCPETFYTSVEVTAGSRLFYHVVQNDKLVIRMIAEINKHNLPGEVNFLPINRLCVQESSYPETNDAIPMISRLNFDEKFRGVMLHIFGKTLICRSIEIATQLARTKNFDCITLDGDQVSRKGTLTGGYYDSRLSRLELQKRKQKTEIEIQETENVRENNAKRKEQVDAQINRIIDDVQRKDTVRSKHEMTFDKLKKDIHMWKEELRGKQETKPQKEYKLSSLRHDLDQMKYTMESYKVELGTDLLSQLSVQEQREVDRLNDKIQELTREAKDAYKKRITLETEKNEKETQLEHNLLRKQEQLESEVAEASEQDLQDRLTESEEELREVERLIEGAQRTVDEVETRLSALLHEQRQLESEMERKKQEEKEYAERIQDDQQNLEKMQSKQSQLLKKKEENMKKIRDLGSLPANTFDKFQDKNMKQLFKLLDKANRELKRYSHVNKKALDQFVSHSEEKEKLLKRKEELDKGCQAIKDLMNALDHQKYEAIQLTFKQVSKNFQDIFKRLVPEGRAELVMKKGVRQEGEGSSDEDGGADSSVIPDVERFIGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIKDLKSEAQFITTTFRPELLESAEKFYGVKFRNKVSHIECVTKGEALDFVEDDQTHG 1210
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Match: A0A4Z2DHG4 (Structural maintenance of chromosomes protein OS=Schistosoma japonicum OX=6182 GN=EWB00_000916 PE=3 SV=1) HSP 1 Score: 1741.86 bits (4510), Expect = 0.000e+0 Identity = 899/1211 (74.24%), Postives = 1051/1211 (86.79%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKG----KHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIKKVIIQGFRSYRDQTCP EF PHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLS QER NLLHEGTGPRV+SAYVE+IFDNSDNRIPFDK EVSLRRIIG+KKDQYFLDKKMVTK DVMN+LESAGFSRSNPYYIVKQGKITQLATAPD+QRLKLLREVAGTRVYDERKEESKQIFKESEAK +QI+ELL+SI+DRLRTLE+ETKELKEYQ DRDRR+LEFTI+DRELK+ ++KL+EI+ RREQSS +T ++R+AAK CA+ IEKLERD RD RLKE QM DEVEQ+Q+ +S+ LQRREQLQL + DY T RGG +AR RA ++L RV +I QV++RL E++PQY+ A+ EDE+ N+LSDAEHRRKELFAKQGRVNQFQSR QRDEWIK+QMKSL+KAIKDKENTI KL++EI D +R E L +L AE NM VR+ELE VSEE R+LRR+KDE+Q DRQTVYR+E+++ +LNNLRDEL RTEHNLRSITGK ILNGLDSVR+V+EIFR+++G DC +VQGY+GTLIELI+CP+TFYTSVEVTAG+RLFYHVV+N++LVI+++ E+NKHN PGE+NF PINRL +E YPETNDAIPM+SRL FD KF+ VMLH FGKTL+CRSIEIAT LA+ NFDC+TLDGDQVSR+GTLTGGYYD R SRLELQKRKQK E+EIQETENV++N RKE +D+ IN IID +QRK+TVR+KHEMTFDKLKKDI++WKEE K E KPQKE+KL+SLRHDL+QMKYT ESY+VELGTDLL+QLS EQREVD+LN+ IQ LT +AKEAY +R+ LE EK E ET L+HNL+RK++QLE+E+ E SE D+ +RL E+E+ELR ++ IE Q+ V+ E +L+ + E+R+LE+++E + +EK+YA+ IQDDQQNLEKMQSKQSQLLKKKEE ++KIR++GSLPA+ +KF DK MKQL+KLLDKANRE+KRYSHVNKKALDQFVS++EEKEKLLKRKEELDKG QAI DLM ALDHQKYEAI LTFKQVS FQ+IFK+LVP+GRAEL+++KG + D D S+IP+VERF GVGI VSFTG A M+DMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD QYRKAVADMI+ L +AQFITTTFRPE+LE+AE+FYGVKFRNKVSHI+ V+K EALDFVEDDQTHG Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSNQERQNLLHEGTGPRVISAYVEMIFDNSDNRIPFDKNEVSLRRIIGSKKDQYFLDKKMVTKADVMNMLESAGFSRSNPYYIVKQGKITQLATAPDHQRLKLLREVAGTRVYDERKEESKQIFKESEAKREQISELLNSIEDRLRTLENETKELKEYQHWDRDRRALEFTIYDRELKETRKKLEEIQTRREQSSESTAEIRRAAKDCANAIEKLERDLRDNRLKEAQMQDEVEQVQASVSDVLQRREQLQLTIADYSATLRGGKSARERASEELNRVKEQISQVERRLAELRPQYKKAKQFEDELANALSDAEHRRKELFAKQGRVNQFQSRGQRDEWIKDQMKSLSKAIKDKENTINKLTEEIKRDDERREKLQQDLEVAEENMTCVRKELETVSEEQRRLRREKDEIQTDRQTVYREETRIAHELNNLRDELARTEHNLRSITGKGILNGLDSVRKVVEIFRDRYGPDCDIVQGYHGTLIELIDCPETFYTSVEVTAGSRLFYHVVQNDKLVIRMIAEINKHNLPGEVNFLPINRLCVQECSYPETNDAIPMISRLNFDEKFRGVMLHIFGKTLICRSIEIATQLARTKNFDCITLDGDQVSRKGTLTGGYYDSRLSRLELQKRKQKTEIEIQETENVRENNAKRKEQVDAQINRIIDDVQRKDTVRSKHEMTFDKLKKDIHMWKEELRGKQETKPQKEYKLSSLRHDLDQMKYTMESYKVELGTDLLSQLSVQEQREVDRLNDKIQELTREAKEAYKKRITLETEKNEKETQLEHNLLRKQEQLESEVAETSEQDLQDRLTESEEELREVERLIEGAQRTVDEVETRLSALLHEQRQLESEMERKKQEEKEYAERIQDDQQNLEKMQSKQSQLLKKKEENMKKIRDLGSLPANTFDKFQDKNMKQLFKLLDKANRELKRYSHVNKKALDQFVSHSEEKEKLLKRKEELDKGCQAIKDLMNALDHQKYEAIQLTFKQVSKNFQDIFKRLVPEGRAELVMKKGVLQEGEGSSDEDGGADGGSAIPDVERFIGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIRDLKSEAQFITTTFRPELLESAEKFYGVKFRNKVSHIECVTKGEALDFVEDDQTHG 1211
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Match: A0A095C3F2 (Structural maintenance of chromosomes protein OS=Schistosoma haematobium OX=6185 GN=MS3_04508 PE=3 SV=1) HSP 1 Score: 1734.92 bits (4492), Expect = 0.000e+0 Identity = 899/1221 (73.63%), Postives = 1054/1221 (86.32%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNII-----------VGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDP---SSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIKKVIIQGFRSYRDQTCP EF PHHNII VGRNGSGKSNFFQAIQFVLSDEYSHLS QER NLLHEGTGPRV+SAYVE+IFDNSDNRIPFDK EVSLRRIIG+KKDQYFLDKKMVTK DVMN+LESAGFSRSNPYYIVKQGKITQLATAPD+QRLKLLREVAGTRVYDERKEESKQIFKESEAK +QI+ELL+SI+DRLRTLE+ETKELKEYQ DRDRR+LEFTI+DRELK+ ++KL+EI+ RREQSS +T ++R+AAK CAD IEKLERD RD RLKE QM DEVEQ+Q+ +S+ LQRREQLQL + DY T RGG +AR RA ++L RV +I QV++RL E++PQY+ A+ EDE+ N+LSDAEHRRKELFAKQGRVNQFQSR+QRDEWIK+QMKSL+KAIKDKENTI KL++EI D +R E L +L AE NM VR+ELE VSEE R+LRR+KDE+Q DRQTVYR+E+++ +LNNLRDEL RTEHNLRSITGK ILNGLDSVR+V+EIFR+++G DC +VQGY+GTLIELI+CP+TFYTSVEVTAG+RLFYHVV+N++LVI+++ E+NKHN PGE+NF PINRL +ES YPETNDAIPM+SRL FD KF+ VMLH FGKTL+CRSIEIAT LA+ NFDC+TLDGDQVSR+GTLTGGYYD R SRLELQKRKQK E+EIQETENV++N RKE +D+ IN IID +QRK+TVR+KHEMTFDKLKKDI++WKEE K E KPQKE+KL+SLRHDL+QMKYT ESY+VELGTDLL+QLS EQREVD+LN+ IQ LT +AK+AY +R+ LE EK E ET L+HNL+RK++QLE+E+ E SE D+ +RL E+E+ELR ++ IE Q+ V+ E +L+ + E+R+LE+++E + +EK+YA+ IQDDQQNLEKMQSKQSQLLKKKEE ++KIR++GSLPA+ +KF +K +KQL+KLLDKANRE+KRYSHVNKKALDQFVS++EEKEKLLKRKEELDKG QAI DLM ALDHQKYEAI LTFKQVS FQ+IFK+LVP+GRAEL+++KG + +ED SS IP+VERF GVGI VSFTG A M+DMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD QYRKAVADMI+ L +AQFITTTFRPE+LE+AE+FYGVKFRNKVSHI+ V+K EALDFVEDDQTHG Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIGMICLTSIIPIVGRNGSGKSNFFQAIQFVLSDEYSHLSNQERQNLLHEGTGPRVISAYVEMIFDNSDNRIPFDKNEVSLRRIIGSKKDQYFLDKKMVTKADVMNMLESAGFSRSNPYYIVKQGKITQLATAPDHQRLKLLREVAGTRVYDERKEESKQIFKESEAKREQISELLNSIEDRLRTLENETKELKEYQHWDRDRRALEFTIYDRELKETRKKLEEIQTRREQSSESTAEIRRAAKDCADAIEKLERDLRDNRLKEAQMQDEVEQVQASVSDVLQRREQLQLTIADYSATLRGGKSARERASEELNRVREQINQVERRLAELRPQYKKAKQFEDELANALSDAEHRRKELFAKQGRVNQFQSRSQRDEWIKDQMKSLSKAIKDKENTINKLTEEIKRDDERREKLQQDLEVAEENMTCVRKELETVSEEQRRLRREKDEIQTDRQTVYREETRIAHELNNLRDELARTEHNLRSITGKGILNGLDSVRKVVEIFRDRYGPDCDIVQGYHGTLIELIDCPETFYTSVEVTAGSRLFYHVVQNDKLVIRMIAEINKHNLPGEVNFLPINRLCVQESSYPETNDAIPMISRLNFDEKFRGVMLHIFGKTLICRSIEIATQLARTKNFDCITLDGDQVSRKGTLTGGYYDSRLSRLELQKRKQKTEIEIQETENVRENNAKRKEQVDAQINRIIDDVQRKDTVRSKHEMTFDKLKKDIHMWKEELRGKQETKPQKEYKLSSLRHDLDQMKYTMESYKVELGTDLLSQLSVQEQREVDRLNDKIQELTREAKDAYKKRITLETEKNEKETQLEHNLLRKQEQLESEVAEASEQDLQDRLTESEEELREVERLIEGAQRTVDEVETRLSALLHEQRQLESEMERKKQEEKEYAERIQDDQQNLEKMQSKQSQLLKKKEENMKKIRDLGSLPANTFDKFQEKNIKQLFKLLDKANRELKRYSHVNKKALDQFVSHSEEKEKLLKRKEELDKGCQAIKDLMNALDHQKYEAIQLTFKQVSKNFQDIFKRLVPEGRAELVMKKGVRQEGEGSSDEDGGADSSVIPDVERFIGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIRDLKSEAQFITTTFRPELLESAEKFYGVKFRNKVSHIECVTKGEALDFVEDDQTHG 1221
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Match: A0A0X3PK78 (SMC hinge domain-containing protein (Fragment) OS=Schistocephalus solidus OX=70667 GN=TR126009 PE=4 SV=1) HSP 1 Score: 1734.54 bits (4491), Expect = 0.000e+0 Identity = 888/1215 (73.09%), Postives = 1044/1215 (85.93%), Query Frame = 1 Query: 88 SCTMYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEED-----PSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 + MYIKKVIIQGFRSYRDQTCP EF PHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLS QER NLLHEGTGPRV+SAYVE+IFDNSDNRIPFDK EVSLRRIIG+KKDQYFLDKKMVTK DVMN+LESAGFSRSNPYYIVKQGKITQLAT+PD+QRLKLLREVAGTRVYDERKEESKQIF+ESEAK +QI+ELL+SI++RLRTLE+ETKELKEYQK DRDRR+LE+TI+DRELK+ ++KL+E++ +REQSS +T + R+AAK+ AD IE+LER+ RD RLKE Q+ DEVEQ+Q +SE LQRREQLQL DY T R G +AR RA ++L RV +I+ V++RL E+KP+Y+ AR KED++ N+LSDAEHRRKELFAKQGR+NQF+SR QRD+WIK QMK L+KAIKDKENTI KL+DEI D R L +L+ AE N+ VR ELE VSE+ R+LRR+KDE+Q DRQTVYR+E+K+ Q+LNN RDEL RTEH+LRSITGK ILNGLDSVR+ IEIFR+K+G +C +VQGYYGTLIEL+ CP+ FYTSVEVTAG+RLFYHVV+N++ VI+I+ E+NKHN PGE++F PINRL +E YPET AIPM+SRL FD KF+ VMLH FGKTL+C SI++A LA+ NFDC+TLDGDQVSR+GTLTGGYYD R SRLELQ+RKQK EMEIQETENV++N RKE +D+ IN IID+LQRKETVR+K EMT+DKLKKDI+LWKEE KTE +PQKE KL SLRHDLEQMKYT ESY+VELGTDLL+QLS EQREVD+LN+ IQ LT AKE+Y +RM LE EKTE ET L+HNL RK++QLEAE+ E SE D+ ERL+EAEDEL+ ++ RIEA Q+ V+ E +L + ++RRLET LE+ + +EK++ + +QDDQQ+LEKMQSKQSQL+KKKEE ++KIR++GSLPADA +KF DK++KQL+KLLDKANRE+KRYSHVNKKALDQFVS++EEKEKLLKRKEELDK HQAIIDLM ALDHQKYEAI LTFKQVS FQ+IFK+LVP+GRAEL++ KGK D DDE+D PS +P+VERFTGVGI VSFTG A M+DMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD QYR AVADMI+ L +AQFITTTFRPE+LE+AE++YGVKFRNKVSHI+ V+KEEALDFVEDDQTHG Sbjct: 19 AAVMYIKKVIIQGFRSYRDQTCPEEFSPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSNQERQNLLHEGTGPRVISAYVEMIFDNSDNRIPFDKNEVSLRRIIGSKKDQYFLDKKMVTKADVMNMLESAGFSRSNPYYIVKQGKITQLATSPDSQRLKLLREVAGTRVYDERKEESKQIFRESEAKREQISELLNSIEERLRTLENETKELKEYQKWDRDRRALEYTIYDRELKETRKKLEELQAKREQSSESTAETRRAAKETADQIERLERELRDTRLKEAQLQDEVEQVQHSVSEVLQRREQLQLTCADYSATLRSGKSARERAAEELARVNSQIELVEQRLTELKPEYKAARQKEDDIANALSDAEHRRKELFAKQGRLNQFRSRGQRDDWIKNQMKGLSKAIKDKENTIAKLTDEISKDDDRKTKLQADLTVAEDNINCVRTELETVSEDSRRLRREKDEIQTDRQTVYREETKIAQELNNWRDELARTEHSLRSITGKVILNGLDSVRKCIEIFRDKYGPECDIVQGYYGTLIELLECPEDFYTSVEVTAGSRLFYHVVQNDKYVIRIIAEINKHNLPGEVHFLPINRLSVKEFRYPETEGAIPMISRLKFDEKFRPVMLHIFGKTLICSSIDVAAQLARKQNFDCITLDGDQVSRKGTLTGGYYDNRLSRLELQRRKQKTEMEIQETENVRENNAKRKEQVDAQINRIIDELQRKETVRSKLEMTYDKLKKDIHLWKEELRTKTEGRPQKERKLASLRHDLEQMKYTMESYKVELGTDLLSQLSVQEQREVDRLNDKIQELTRDAKESYKQRMKLETEKTEKETQLEHNLFRKREQLEAELAEASEQDLCERLREAEDELKEVEHRIEAAQRTVDEVESRLEALMNDQRRLETDLESKKYEEKEFTERMQDDQQSLEKMQSKQSQLIKKKEENMKKIRDLGSLPADAFDKFKDKSLKQLFKLLDKANRELKRYSHVNKKALDQFVSHSEEKEKLLKRKEELDKAHQAIIDLMNALDHQKYEAITLTFKQVSKNFQDIFKRLVPEGRAELVMHKGKKDANASDDEDDVPTGGPSMPLPDVERFTGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRVAVADMIRDLKSEAQFITTTFRPELLESAEKYYGVKFRNKVSHIECVTKEEALDFVEDDQTHG 1233
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Match: A0A4Z2DHJ9 (Structural maintenance of chromosomes protein OS=Schistosoma japonicum OX=6182 GN=EWB00_000916 PE=3 SV=1) HSP 1 Score: 1707.58 bits (4421), Expect = 0.000e+0 Identity = 882/1190 (74.12%), Postives = 1032/1190 (86.72%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKG----KHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVS 3654 MYIKKVIIQGFRSYRDQTCP EF PHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLS QER NLLHEGTGPRV+SAYVE+IFDNSDNRIPFDK EVSLRRIIG+KKDQYFLDKKMVTK DVMN+LESAGFSRSNPYYIVKQGKITQLATAPD+QRLKLLREVAGTRVYDERKEESKQIFKESEAK +QI+ELL+SI+DRLRTLE+ETKELKEYQ DRDRR+LEFTI+DRELK+ ++KL+EI+ RREQSS +T ++R+AAK CA+ IEKLERD RD RLKE QM DEVEQ+Q+ +S+ LQRREQLQL + DY T RGG +AR RA ++L RV +I QV++RL E++PQY+ A+ EDE+ N+LSDAEHRRKELFAKQGRVNQFQSR QRDEWIK+QMKSL+KAIKDKENTI KL++EI D +R E L +L AE NM VR+ELE VSEE R+LRR+KDE+Q DRQTVYR+E+++ +LNNLRDEL RTEHNLRSITGK ILNGLDSVR+V+EIFR+++G DC +VQGY+GTLIELI+CP+TFYTSVEVTAG+RLFYHVV+N++LVI+++ E+NKHN PGE+NF PINRL +E YPETNDAIPM+SRL FD KF+ VMLH FGKTL+CRSIEIAT LA+ NFDC+TLDGDQVSR+GTLTGGYYD R SRLELQKRKQK E+EIQETENV++N RKE +D+ IN IID +QRK+TVR+KHEMTFDKLKKDI++WKEE K E KPQKE+KL+SLRHDL+QMKYT ESY+VELGTDLL+QLS EQREVD+LN+ IQ LT +AKEAY +R+ LE EK E ET L+HNL+RK++QLE+E+ E SE D+ +RL E+E+ELR ++ IE Q+ V+ E +L+ + E+R+LE+++E + +EK+YA+ IQDDQQNLEKMQSKQSQLLKKKEE ++KIR++GSLPA+ +KF DK MKQL+KLLDKANRE+KRYSHVNKKALDQFVS++EEKEKLLKRKEELDKG QAI DLM ALDHQKYEAI LTFKQVS FQ+IFK+LVP+GRAEL+++KG + D D S+IP+VERF GVGI VSFTG A M+DMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD QYRKAVADMI+ L +AQFITTTFRPE+LE+AE+FYGVKFRNKVS Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSNQERQNLLHEGTGPRVISAYVEMIFDNSDNRIPFDKNEVSLRRIIGSKKDQYFLDKKMVTKADVMNMLESAGFSRSNPYYIVKQGKITQLATAPDHQRLKLLREVAGTRVYDERKEESKQIFKESEAKREQISELLNSIEDRLRTLENETKELKEYQHWDRDRRALEFTIYDRELKETRKKLEEIQTRREQSSESTAEIRRAAKDCANAIEKLERDLRDNRLKEAQMQDEVEQVQASVSDVLQRREQLQLTIADYSATLRGGKSARERASEELNRVKEQISQVERRLAELRPQYKKAKQFEDELANALSDAEHRRKELFAKQGRVNQFQSRGQRDEWIKDQMKSLSKAIKDKENTINKLTEEIKRDDERREKLQQDLEVAEENMTCVRKELETVSEEQRRLRREKDEIQTDRQTVYREETRIAHELNNLRDELARTEHNLRSITGKGILNGLDSVRKVVEIFRDRYGPDCDIVQGYHGTLIELIDCPETFYTSVEVTAGSRLFYHVVQNDKLVIRMIAEINKHNLPGEVNFLPINRLCVQECSYPETNDAIPMISRLNFDEKFRGVMLHIFGKTLICRSIEIATQLARTKNFDCITLDGDQVSRKGTLTGGYYDSRLSRLELQKRKQKTEIEIQETENVRENNAKRKEQVDAQINRIIDDVQRKDTVRSKHEMTFDKLKKDIHMWKEELRGKQETKPQKEYKLSSLRHDLDQMKYTMESYKVELGTDLLSQLSVQEQREVDRLNDKIQELTREAKEAYKKRITLETEKNEKETQLEHNLLRKQEQLESEVAETSEQDLQDRLTESEEELREVERLIEGAQRTVDEVETRLSALLHEQRQLESEMERKKQEEKEYAERIQDDQQNLEKMQSKQSQLLKKKEENMKKIRDLGSLPANTFDKFQDKNMKQLFKLLDKANRELKRYSHVNKKALDQFVSHSEEKEKLLKRKEELDKGCQAIKDLMNALDHQKYEAIQLTFKQVSKNFQDIFKRLVPEGRAELVMKKGVLQEGEGSSDEDGGADGGSAIPDVERFIGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIRDLKSEAQFITTTFRPELLESAEKFYGVKFRNKVS 1190
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Match: smc3 (structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:103034304]) HSP 1 Score: 1136.71 bits (2939), Expect = 0.000e+0 Identity = 620/1222 (50.74%), Postives = 866/1222 (70.87%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS----------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE + +R A + D +E+ ER R+L+ + M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L+E +P++ + KE+ L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ C FYT VEVTAGTRLFYH+VE +E+ KIL E NK N PGE+ F P+++L R++ YPETNDAIPM+S+L + F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +QR VD LN+ I+ L ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL I++RI+ + + + + + E + +E ++ EK+ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ T+KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR++ELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + DE + SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID +S E+A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAYPETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDMRKAEEELSELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDSLIDKTEIEIKDHIKSMERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGGQSQDEGEGGADSEKGSASQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVISAEQAKDFVEDDTTHG 1217
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Match: smc2 (structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]) HSP 1 Score: 96.6709 bits (239), Expect = 1.195e-19 Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGV--GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHI 3660 I++ +K LD +K EA+ + +++V+ F IF L+P A L +G GV G+E G+ +++ +LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ +QF+ + + M A + KF + VS + Sbjct: 997 ILETIKELDQKKNEALNVAWQKVNKDFGSIFSTLLPGANARLAPPEG-----------------------CGVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFVVVSLKDGMFTNANVLFKTKFVDGVSTV 1150
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Match: smc1a (structural maintenance of chromosomes 1A [Source:NCBI gene;Acc:103021942]) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 54/181 (29.83%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGT--GPRVVSAYVEIIF--DNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGT----RVYDERKEE 618 Y+K + I+ F+SY+ + G F I+G NGSGKSN AI FVL+++ S+L + +L+H P A+V +++ +N+D R + R+I +Y +D K+V+ +D LE G ++V QG + +A +R L E++ + + YD RK+E Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFH-KFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKTLKDLIHGAPVGKPAANRAFVSMVYCEENADER--------TFTRVIIGSSSEYRIDSKVVSLSDYSEELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKE 174 HSP 2 Score: 73.559 bits (179), Expect = 1.367e-12 Identity = 46/157 (29.30%), Postives = 74/157 (47.13%), Query Frame = 1 Query: 3166 QKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLS-KDAQFITTTFRPEMLEAAERFYGV 3633 ++++ F+ V+ EI+K L + A+ + ++ LD GI + + + M+ LSGG+K++ AL L+FAI PAPF++ DEIDAALD VA+ IK S ++ Q I + + E A+ GV Sbjct: 1064 ERFDRFNTCFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLD------------------GINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLIGV 1202
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Match: smc4 (structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:103045898]) HSP 1 Score: 78.9518 bits (193), Expect = 3.018e-14 Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 3157 LDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 L Q+ + F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA I +K+AQFI + R M E A+R G+ Sbjct: 985 LRKQRLNEFMAGFNIITNKLKENYQMLTLGGDAEL----------ELVDSLDPFSE----------GIMFSVRPPKKSWKKIYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADRLIGI 1123 HSP 2 Score: 58.5362 bits (140), Expect = 5.069e-8 Identity = 47/181 (25.97%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPR-VVSAYVEIIFDNSDNR-------IPFDKTEVSLRRIIG-NKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGT 591 + I ++ + F+SY + G F + I+G NGSGKSN ++ FV + ++ L+H + + S VE+ F ++ IP K VS R G + Y ++ K T DV +L S G + +++ QG++ Q+A T D L+ L ++ G+ Sbjct: 10 LMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDEHKDIQSCTVEVHFQKIVDKEGDDYDVIPNSKFHVS--RTAGKDNSSAYHINGKKATFKDVGTVLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGS 188
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Match: smc1al (structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]) HSP 1 Score: 78.1814 bits (191), Expect = 4.897e-14 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGT--GPRVVSAYVEIIF--DNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGT----RVYDERKEE 618 Y+K + I+ F+SY+ + G F I+G NGSGKSN AI FVL+++ S+L + +L+H P AYV +++ DN ++ + RII +Y ++ K+V +D LE G ++V QG + +A +R L E++ + + YD RK+E Sbjct: 3 YLKLIEIENFKSYKGKQIIGPFH-KFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKTLKDLIHGAPVGKPAANRAYVSMVYHEDNGED--------CTFTRIIIGSSSEYRINSKVVGLSDYSEALEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKE 174 HSP 2 Score: 61.6178 bits (148), Expect = 5.075e-9 Identity = 41/163 (25.15%), Postives = 69/163 (42.33%), Query Frame = 1 Query: 3166 QKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAAL-------DPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 ++++ F+ V+ EI+K L + A+ + ++ LD GI + + + M+ LSGG+K++ AL L+FAI PAPF++ DEID DP+ K +K+ Q I + + E A+ GV Sbjct: 1065 ERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLD------------------GINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDVGFHQSQCLNDPKLYK---------NKNFQAIVISLKEEFYTKADSLVGV 1200
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Match: smc2 (structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]) HSP 1 Score: 124.405 bits (311), Expect = 6.427e-29 Identity = 74/230 (32.17%), Postives = 127/230 (55.22%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS-DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNR---IPFD-KTEVSL-RRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELL-SSIDDRLRTLESETKELKEYQKCDRDRRSL 765 MYIK +++ GF+SY +T ++DP N I G NGSGKSN A+ FVL S + L+++ V A V I FDN D + + F+ E+++ R+++ +++Y ++ T V +L S G + +NP++++ QG+IT++ + L ++ E AGTR+Y+ +K +++ ++ EAK+ +IN++L I L L+ E EY K R+ SL Sbjct: 1 MYIKSIVVDGFKSYAQRTEISDWDPLFNAITGLNGSGKSNILDAVCFVLGISNLSRVRAASLQELVYKNGQAGVTKATVSITFDNRDRKQSPLGFEGHAEITVTRQVVIGGRNKYLINGVNATTARVQDLFRSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYESKKLAAQKTIEKKEAKLKEINDVLDEEISPTLEKLKQERTSYLEYSKLCRELDSL 230 HSP 2 Score: 90.1225 bits (222), Expect = 2.521e-18 Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQ 3666 I M+ LD +K EA+ L ++QV+ F IF L+P +A L T ++ +SS+ + G+E G +++++LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ +QF+ + + M A + +F VS + + Sbjct: 1014 IFSAMQELDLKKNEALNLAWRQVNGDFSSIFSTLLPGSQARL---------TPVESSSSSTSSLLQ-------GLEFRVALGSVWKENLSELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGHMLRTHFLTSQFVVVSLKDGMFNNANVLFKTRFVEGVSTVTR 1174
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008608.1 (pep scaffold:Pmarinus_7.0:GL477381:37203:71735:-1 gene:ENSPMAG00000007778.1 transcript:ENSPMAT00000008608.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 76.2554 bits (186), Expect = 3.582e-14 Identity = 202/984 (20.53%), Postives = 400/984 (40.65%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTG-PRVVSAYVEIIFDNSDNR-------IPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLK--IQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKD-------KENTIRKLSDEIDSDIKRIEDLVNEL-------SGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSI-----TGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRL-----TFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLE-------LQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEI----------IDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGT---------DLLTQLS----TSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDY 2829 + I ++ + F+SY + G F + I+G NGSGKSN ++ FV + ++ L+H P + S VE+ F ++ IP + VS R + Y + T DV LL S G + +++ QG++ Q+A T D L+ + ++ G+ + K + +++Q+NEL +R++ +E E L E +K + ++ F + + ++ ++K L + K + + ++ T + +KA DIE+ +D ++ +M + V+ + E + +N + + + Q DLQ V ++ ++ + +++ Q K E+ N + ++ K A + + S++ +E +K M + K K K+ + LS E++ R+E +EL + A A + +Q L + +E L R +++ + ++ ++ Q +L L N +R++ KS L S +V+++ ++ + G YG L +L + + ++ G L VV+ + + + KHN G F ++++ E ++ + RL D + TLV ++E A+ +A + VTL G + GT++GG R+ Q+ ++ME ++QE + Y ++ L+ + + + KL V+ + E++ KL+ KE + A P K +L L LE K E G L+ +++ ++Q +VDK+N+ I +A A KT D NL + ++ L TE + + + + +EL++++E K+ ++E+ EV E +R L +L+ L +E+ Y Sbjct: 89 LMITHIVNENFKSYAGKQVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSEAHPDLYSCTVEVHFQKIVDKEGDDFDVIPSSEFYVS-RSATKDSVSSYTVSGHKATFRDVGQLLRSHGIDLDHNRFLILQGEVEQIALMKPKAQTEHDEGMLEYMEDIIGSGRF-------KPAIEACCRRVEQLNELRGEKLNRVKVVEKEKDGL-EAEKNN----AVAFLMAENDITNLKNSLVQHKMQTARKALATEERKKA------DIEEASKDLKE------KMAELVQAKKGKAKELQAIDKWKLNKINAFIEEHK-----KTFVQYDLQDVKMRENLKNCASKEKKLAKQLVKDTDKLKEIRNVPAASDRTIK--VATECKAKLEASKSVEEEKLKSVMANFEKETKGLQEEKEVKQQELLALSKEVNERCSRMEVAQSELDLYMSRHTSALAALNEAKQALTSTTEGLCGRRENIRKLETTIPSTEKELAQAQLELEKLAPLENAARAEVRALRQKTEEAKSSLCASRSRNKVLQLLMDQKNKGS--LPGIYGRLGDLGAIEEKYDVAISSCCGA-LDNIVVDTMDTAQACVTYLKKHNI-GSATFIGLDKMRVWEGTMKKSVQGPEGVLRLFDLVRVGDEAVRTAFYFTLRDTLVANNLEQASRVAFQHQRRWRVVTLQGQVIETSGTMSGGGTRVMKGRMGSSVVSEVPQEEVERMEHKLQEESAKMEQYQQQRSQLEERVQTLQTSLRDMKYNLQKLSAGVKVQVEQEVSL-KLQ-----VKELEANVVAAAPDKN-QLKKLEKTLEGFKKEYEKVSSRTGKIEAEVKRIHGLIMEITQGRLKAQQDKVDKINQQIDECVSDITKAQV------ALKTA-----DRNLKKAEEALAK--TEREQEENRQAIVRLNEELKSLEEAAAEIMKECTHAQERGKEVSELQRELMGELKALSEEEQGY 1016 HSP 2 Score: 74.3294 bits (181), Expect = 1.589e-13 Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 3193 FKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA + +K+AQFI + R M E ++R G+ Sbjct: 1149 FNVITNKLKENYQMLTQGGDAEL----------ELVDSLDPFSE----------GIVFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVALYVYEQTKNAQFIIISLRNNMFEMSDRLIGI 1275
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000346.1 (pep scaffold:Pmarinus_7.0:GL477118:44770:74561:-1 gene:ENSPMAG00000000296.1 transcript:ENSPMAT00000000346.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 70.4774 bits (171), Expect = 2.493e-12 Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 1 Query: 3190 TFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLS-KDAQFITTTFRPEMLEAAERFYGV 3633 + +S +I+KKL + A+ + ++ LD GI + + + M+ LSGG+K++ AL L+FAI P+PF++ DEIDAALD VA+ IK S ++ Q I + + E+ A+ GV Sbjct: 1065 CLEHLSIAIDDIYKKLAQNNSAQAFLGPENAEEPYLD------------------GINYNCVAPGKRYQPMDNLSGGEKTVAALALLFAIHSYRPSPFFVLDEIDAALDNTNIGKVANYIKEQSVENFQVIVISLKEELFARADALIGV 1195 HSP 2 Score: 59.3066 bits (142), Expect = 6.640e-9 Identity = 41/165 (24.85%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVS--AYVEIIF-DNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVA 585 Y++ + ++ F+SY+ + G F + ++G NGSGKSN AI FVL ++ +L + +L++ R V+ A+V +++ + + F +T IIG+ +Y +DK+++ ++ L G ++V QG + +A +R L +++ Sbjct: 3 YLQLIEVENFKSYQGKQTIGPF-TRFSAVIGPNGSGKSNLMDAISFVLGEQKRNLRVRSLRDLVYGAPVGRPVATRAHVSMMYAEEGGSHTVFTRT------IIGS-TSEYRVDKRVLNFSEYSAQLAKRGILTKARNFLVFQGAVESIAMKTPKERTWLFEQIS 159
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002584.1 (pep scaffold:Pmarinus_7.0:GL477247:652:6382:-1 gene:ENSPMAG00000002354.1 transcript:ENSPMAT00000002584.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 66.2402 bits (160), Expect = 2.818e-12 Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 1 Query: 100 YIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGT--GPRVVSAYVEIIF--DNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVA 585 ++K + ++ F+SY+ + G F I+G NGSGKSN AI FVL ++ S+L + +L+H P AYV +++ DN + + V R IIG+ +Y ++ K+V + + LE G ++V QG + +A +R +L E++ Sbjct: 3 FLKLIELENFKSYKGKQIIGPFK-RFAAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLKDLIHGAPVGKPAANKAYVSMVYAEDNGEEK-------VFTRYIIGS-SSEYRINSKVVQLQEYSSELEKLGILIKARNFLVFQGAVESIAMKNPKERTQLFEEIS 159
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Match: SMC1A (structural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]) HSP 1 Score: 63.929 bits (154), Expect = 1.906e-10 Identity = 35/120 (29.17%), Postives = 57/120 (47.50%), Query Frame = 1 Query: 3157 LDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALD 3516 + ++++ F+ VS EI+K L + A+ + ++ LD GI + + + M+ LSGG+K++ AL L+FA PAPF++ DEIDAALD Sbjct: 693 IKKERFDRFNACFEAVSTNIDEIYKALSRNASAQAFLGPENPEEPYLD------------------GINYNCVAPGKRFRPMDNLSGGEKTVAALALLFATHSYKPAPFFVLDEIDAALD 794
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Yeast
Match: SMC3 (Subunit of the multiprotein cohesin complex; required for sister chromatid cohesion in mitotic cells; also required, with Rec8p, for cohesion and recombination during meiosis; phylogenetically conserved SMC chromosomal ATPase family member [Source:SGD;Acc:S000003610]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 414/1259 (32.88%), Postives = 697/1259 (55.36%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKT-------EVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRD----LRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKD----------KENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESV-YPETNDA----IPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEV--LDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGT---DLL----TQLSTSEQREVDKLNETIQG------LTIKAKEAYTERM-CLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRL---ETQ----LENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADAL-EKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRK-----GKHDDTL---LDDEEDPSSSIPEVE-RFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFV 3696 MYIK+VII+GF++YR++T F PH N+I+G NGSGKSNFF AI+FVLSD+YS+L +ER L+H+G+G V+SA VEI+F + D+ + EV++RR +G KKD Y L+ + VTK D++ +LE+AGFS +NPY IV QGKI L A D +RL+LL +V G + ++ + + S + +E+E K QIN+ + ++ +L +E E KEL++Y + +R+R+ +FT++DREL ++ +++ + + ++ + K D I+++ + L++K +++Q + SE Q+ + + + D + R L+ + I+Q +++L +I P+Y+ +E L+ + ++++L K+G +F+S+ +RD WI +++ L +I++ ++RK ID +I E+L++ ++G + + +LE EL L+++ E R+ ++R+E K+Q L L ++N+ + N+ +S+ NG+ +V+ + E + + +GTL ELI D + T EV G LF+ VV+ EE I+ E+ + G + F P+NRL V +P P++ ++ ++ +F+ + H FGKT+V + + LAK + +TLDGD+ +RG LTGGY DQ R L+ K E Q + +++ R E+ +D+ I+++ +++ R + + +I +++ + K K E L ++ LE++ R Q +L T DLL ++LS E+ ++ L + I +T A E T + L AE L+ L+ +++ LE++M+EV + I +DEL+ + E+ +KQ ++ +L VQ E L ET LE +Q++ + + Q+++EK K++ L+ ++EE ++IREIG LP DAL F+D T QL + L+ N EI +VNK+A + F +NE ++ L +R ELD+ +I DL+ L QK A+ TF++VS F+ +F++LVP G A+LII + HD+++ +D E + S + + E +TGV I VSF + + QLSGGQK++ A+ LI AIQ DPA FYLFDEIDAALD QYR AVA ++K LSK+AQFI TTFR +ML+ A++F+ VK+ NK+S + +V++EEA+ F+ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSASVEIVFHDPDHSMILPSGVLSRGDDEVTIRRTVGLKKDDYQLNDRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMERLDGDYNNTVYSSEQYIQELDKREDMIDQVSKKLSSIEASLKIKNAT---DLQQAKLRESEISQKLTNVNVKIKDVQQQIESNEEQRNLDSATLKEIKSIIEQRKQKLSKILPRYQELTKEEAMYKLQLASLQQKQRDLILKKGEYARFKSKDERDTWIHSEIEELKSSIQNLNELESQLQMDRTSLRKQYSAIDEEI---EELIDSINGPDT-----KGQLEDFDSELIHLKQKLSESLDTRKELWRKEQKLQTVLETLLSDVNQNQRNVNETMSRSLANGIINVKEITEKLKIS-------PESVFGTLGELIKVNDKYKTCAEVIGGNSLFHIVVDTEETATLIMNELYRMK-GGRVTFIPLNRLSLDSDVKFPSNTTTQIQFTPLIKKIKYEPRFEKAVKHVFGKTIVVKDLGQGLKLAKKHKLNAITLDGDRADKRGVLTGGYLDQH-KRTRLESLKNLNESRSQHKKILEELDFVRNELNDIDTKIDQVNGNIRKVSNDR-------ESVLTNIEVYRTSLNTKKNEKLILEESLNAIILKLEKLNTNRTFAQEKLNTFENDLLQEFDSELSKEEKERLESLTKEISAAHNKLNITSDALEGITTTIDSLNAE-------LESKLIPQENDLESKMSEVGDAFIFG----LQDELKELQLEKESVEKQHENAVLELGTVQREIESLIAEETNNKKLLEKANNQQRLLLKKLDNFQKSVEKTMIKKTTLVTRREELQQRIREIGLLPEDALVNDFSDITSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKNDNANDHDESIDVDMDAESNESQNGKDSEIMYTGVSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLLKELSKNAQFICTTFRTDMLQVADKFFRVKYENKISTVIEVNREEAIGFI 1221
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Yeast
Match: SMC4 (Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate [Source:SGD;Acc:S000004076]) HSP 1 Score: 102.834 bits (255), Expect = 2.217e-22 Identity = 154/732 (21.04%), Postives = 321/732 (43.85%), Query Frame = 1 Query: 55 IYESLTGFKRCSCTMYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTG-PRV----VSAYVEIIFDNSDNRIPFDKTEVSL---RRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATA-------PDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDL---RLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQG-RVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQAD--RQTVYRQESK-----VQQQLNNLRDELNRTEHNL-------------------RSITGKSILNGLDSVRRVIEIFR--EKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLT--FDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLN-FDCVTLDGDQVSRRGTLTGG 2100 IY+ + ++I +++++ F+SY + G F + +VG NGSGKSN ++ FV + + +L+H+ P + V+ + + + D S D+ + L R+ N +Y++++K + T+V LL++ G + +++ QG++ +A D+ L+ L ++ GT Y K + +E +++ +NE+ ++R ++ E L+ ++ +LEF +++L ++ KL + K + ++ K A +EK+ +DL ++K + + +V++I++ E R +R R ++ + ++ K+++ +K L+ K +S+S+AE+ +EL +Q + + TQ E + + + ++KDK + +S EI K +E +L E+ ++ EL + E KL++ + ++ + ++QE + ++++LN+L+DE ++ E N R++ +S L+ + +V+ +K G + G++G L +L D+F ++ TA RL VV+ E + + K+ G F ++RL T + +P + L + KF N TLV ++++ A +A F VT+DG + GT++GG Sbjct: 140 IYDRHQSSSKQQSRLFINELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQDRLSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANY-------KPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKET-----ALEFLEKEKQLTLLRSKLFQFK------------LLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTK--------------HSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDK---TKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGR----INGFHGRLGDLGVIDDSFDVAIS-TACPRLDDVVVDTVECAQHCIDYLRKNKL-GYARFILLDRLRQFNLQPISTPENVPRLFDLVKPKNPKFSNAFYSVLRDTLVAQNLKQANNVAYGKKRFRVVTVDGKLIDISGTMSGG 824 HSP 2 Score: 89.3521 bits (220), Expect = 2.926e-18 Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 3157 LDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRN 3645 L ++++ + F +S +E+++ + G AEL L D DP S G+ S +++ LSGG+K+L +L L+FA+ K P P Y+ DEIDAALD + VA+ IK +K+AQFI + R M E A++ GV R+ Sbjct: 1259 LKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAEL----------ELVDSLDPFSE----------GVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQQLVGVYKRD 1401
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Yeast
Match: SMC2 (Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; essential SMC chromosomal ATPase family member that forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for clustering of tRNA genes at the nucleolus [Source:SGD;Acc:S000001927]) HSP 1 Score: 95.1301 bits (235), Expect = 3.651e-20 Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 3157 LDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHI 3660 L+ K E +V T+++V+ F IF L+P+ A+L+ +GK G+EV G+ + + +LSGGQ+SL+AL+LI A+ + PAP Y+ DE+DAALD + + + +IK K +QFI + + M A R + +F++ S + Sbjct: 1021 LNEYKRETLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKD---------------------VTQGLEVKVKLGNIWKESLIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALDLSHTQNIGHLIKTRFKGSQFIVVSLKEGMFANANRVFRTRFQDGTSVV 1167
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Yeast
Match: SMC1 (Subunit of the multiprotein cohesin complex; essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure [Source:SGD;Acc:S000001886]) HSP 1 Score: 84.7297 bits (208), Expect = 7.030e-17 Identity = 50/151 (33.11%), Postives = 80/151 (52.98%), Query Frame = 1 Query: 3190 TFKQVSHYFQEIFKKLV--PDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMI-KGLSKDAQFITTTFRPEMLEAAERFYGV 3633 TF VS + I+++L P+ EL G + ++DE++P ++ GI+ T + KDM LSGG+K++ AL L+FAI P+PF++ DE+DAALD + +A I + + D QFI + + M E ++ GV Sbjct: 1067 TFDYVSDHLDAIYRELTKNPNSNVEL---AGGNASLTIEDEDEPFNA----------GIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGV 1204
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Nematostella
Match: EDO34136 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ80]) HSP 1 Score: 819.305 bits (2115), Expect = 0.000e+0 Identity = 501/1123 (44.61%), Postives = 738/1123 (65.72%), Query Frame = 1 Query: 112 VIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS-DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDY----RDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGH-----------QAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDP----------SSSIPEVERFTGVGIEVSFTGGDAQMKDM 3402 VIIQGFRSYRDQT F HN+IVGRNGSGKSNFF AIQFVLS DE+S+L +ER LLHEGTGPRVVSA+VE+IFDNSDNR+P +K EVSLRR+IG KKDQYFLDKK VTK+DVMNLLESAGFSRSNPYYIVKQG+I QLA A DN+RLKLLREVAGTRVYDERKEESKQI K+SE K ++I ELL I+DRL+TLE E +ELK YQK DR+RR LE+TI D+EL+D + KL+E+ D L+ K+ D EKLE Y RDL KE + E +Q++ E +++R +L+L + D +T+ A + +++L+R+ I Q Q+ L+ + P Y RA+E++ LS E RR EL+AKQGR NQF S+ RD WIK++MKSL + KE+ ++L ++DIK + + +L+ ++E R +E ++E +L+R++DE+ R+ ++RQE+ ++Q +N R+EL+++E L+ K I NG+++V+++++ EK +QG YG LIE C + F+T+VEVTAG RLF+ +V+ ++ IL +N+ PGE+ F P+N++ + + +P+++D +PM+S+L FD + M FGKTL+CR +++AT +K+ N DC+TLDGDQVSRRG LTGG+YD R SRL+LQ+ ++++ E Q T E +D I ++ KLQ+ ET + + T++K K D+ + + +A KE KL++L DL M+ + +S+ ELGT+LL+QL++ +Q EVD++N I L + + + T R+ + LE E+S D ++L+ +L+A+ ++ ++++ E +++ V ++K + +T+LE + E+ ++IQ+D ++LEK+ +K+S L+KKK+E ++KIRE+GSLP+DA +KF +K L+K L N E+K+YSHVNKKALDQF++++E+KEKL+KRK+ELDKG+ QAI+DLM L+ +K+EAI+ TFKQVS YF ++F+KLV +G+ L+++ ++ ++DP S+P V+ FTGV I+VSFTG A+ ++M Sbjct: 1 VIIQGFRSYRDQTIIEPFSSKHNVIVGRNGSGKSNFFFAIQFVLSADEFSNLRQEERQALLHEGTGPRVVSAFVELIFDNSDNRLPIEKDEVSLRRVIGAKKDQYFLDKKNVTKSDVMNLLESAGFSRSNPYYIVKQGRINQLAVAKDNERLKLLREVAGTRVYDERKEESKQILKDSENKKEKIEELLKYIEDRLQTLEEEKEELKAYQKWDRERRCLEYTIHDKELRDTREKLEEVSD----FHTMCLEYTIHDKELRDTREKLEEKYSQSIRDLGEKENVLTSEKKQLEEECQENIKQRTKLELDIKDLETSASDDATTKESYREELERLQGTISQQQQELDNLLPSYNEYRAEEEQCTLRLSACEQRRTELYAKQGRKNQFSSKEARDNWIKKEMKSLTSTVAKKESQFQRL----ETDIKVLHNRPFKLTD---DLEQRRSSIEQNNKEYSELKRKRDELTNTRKELWRQEAAMEQTINTAREELSKSERGLKGTVNKGISNGIETVKKIMQ---EKN------LQGVYGPLIENFTCNEKFFTAVEVTAGNRLFHIIVDTDKTASLILSTMNRQKMPGEVTFMPLNKVKIKPTNFPKSDDVMPMISKLNFDDTLRPAMELAFGKTLICRDLDVATQYSKSENLDCITLDGDQVSRRGALTGGHYDTRKSRLDLQRTIWSSGKKVEDEEVQLQTIKTSLEEIDGQITTVLGKLQKAETRQVQLRETYEKQKLDVRAMTQSKERTEQALKAKESKLSTLETDLGAMRSSLKSWNDELGTELLSQLTSQDQEEVDRINRDINDLQERLRTSVT---------------------RRTEALE----EISIEDQQQQLETRRADLKAVVHVVKKARERLKELESEVSHVAKKKTKAQTKLEEWKVIERSRLEAIQEDARSLEKIANKRSLLVKKKDECMKKIRELGSLPSDAFDKFQKTALKTLWKKLHHCNEELKKYSHVNKKALDQFINFSEQKEKLMKRKDELDKGYEASHHFFIVLCQAIVDLMDVLEMRKHEAILFTFKQVSKYFSDVFEKLVHNGKGTLVMKTDP-----IEHQDDPDSQSSSQASSQGSVPLVDTFTGVAIKVSFTGKAAETREM 1073
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Nematostella
Match: EDO34135 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ79]) HSP 1 Score: 178.718 bits (452), Expect = 1.860e-52 Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 1 Query: 3400 MNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MNQLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALDPQ+RKAVA+MI+ L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DF+EDD HG Sbjct: 1 MNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDPQFRKAVAEMIRNLAVKAQFITTTFRPELLESADKFYGVKFRNKVSHIDAITLEQAKDFIEDDD-HG 105
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Nematostella
Match: EDO40646 (Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:A7S6N1]) HSP 1 Score: 101.293 bits (251), Expect = 1.538e-21 Identity = 168/791 (21.24%), Postives = 344/791 (43.49%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTG-PRVVSAYVEIIFD------NSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGTRVYDERKEE-SKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTT---KRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQ-------ELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHAR---ESVYPETNDAIPMMSRLTF--DAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGG-----------YYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHA 2340 + I K++ + F+SY G F + IVG NGSGKSN A+ FV + ++ L+H + P V S V + F N + + D V R + Y ++ + + +V LL G + +++ QG++ Q++ T ++ L+ L ++ G+ Y E EE +K++ +EA+ +++N + +++ LE E EY + T+F R + + + ++ + +R++ ++ K C+D + ++Y+ M E ++++ + E + + +D K K G N + + QK L++ K+ ++ E+ + Q E K ++ + E + E+ A G ++ + E ++Q+ NK + + ++ + E++ + ++ +L A AN+E V Q E++++ +EL L+ + +AD + + E+K Q+L ++R ++ +L++ +S N L++ + ++K + G YG L +L D + ++ G L + V + E +Q + K+N G F ++++ S +T +P + L DAK TLV +E AT +A N + VTL G + + GT++GG + S +L+ +QK+E E + TE Y +K+ L+ ++E Q+K+ +H++ +++ ++ E+Q A Sbjct: 14 LMITKIVNENFKSYAGVQELGPFHKSFSSIVGPNGSGKSNVIDAMLFVFGYRSKMIRTKKVSQLIHNSSAHPNVASCTVSVHFQRIIDLVNDEFEVVPDSNFVVSRTARKDNSSDYHVNGRKMPFKEVAKLLRDVGIDLDHNRFLILQGEVEQISMMKPKALTEHEDGMLEYLEDIIGSSRYKEPIEELAKEVEVLNEARGEKLNR-VKAVEKEKDELEGSKDEAVEYINMENGITRKRNTLFQRYIYECSQNEEKAQSKRDEVKTGFDELHKQLADCSDRKKTKGKEYKG-------MTKECDKLRKVAEETKENFAAYER--DDLKLREDFKHGKVNGK-KLQKSLEKEKEKLASLKDAPEKNQKQVEELEKKIQQLESQKIKEEDKLAEVMA--GLKSETEGLQNEKEEKEKQLMEKNKDVNETKSKMDVAKSELEIYNSQHKNAQTQLREAHANLESVIQKQTQRKSEIKSIEKELPDLKNNLKKAEADLEKAVQGEAKSSQELRSIRSKVEEARSSLQA--SRSRGNVLEA------LMKQKAAGK---IPGLYGRLGDLGAIDDKYDIAISTACGA-LDHIVCDTMETAQTCVQYLKKNNI-GAATFIGLDKVEVWRKDASSKIQTPSNVPRLYDLVRVKDAKVSTAFYFALRNTLVADELEQATRIAFQGNKRWRVVTLQGSLIDQSGTMSGGGTRVAKGRMCSSFVSDVSPQQLKSMEQKLEQEEKATE----EYREQKKQLEEAVDE-----QKKKVSNLEHQLEKNRM--EVQALSEQQQA 767 HSP 2 Score: 85.5001 bits (210), Expect = 1.085e-16 Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 3154 ALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 AL ++ + + F ++ +E+++ + G AEL L D DP S GI S K+++ LSGG+K+L +L L+FA+ P P Y+ DEIDAALD + VA+ IK +K+AQFI + R M E A+R G+ Sbjct: 1061 ALRKKRLDEFMAGFSIITTKLKEMYQMITLGGDAEL----------ELVDSLDPFSE----------GIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIIISLRNNMFELADRLIGI 1200
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Nematostella
Match: EDO49596 (Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:A7RFF3]) HSP 1 Score: 73.1738 bits (178), Expect = 6.092e-13 Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 3166 QKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDA-QFITTTFRPEMLEAAERFYGV 3633 ++Y+ + F+ VS +I+K+L + A+ + +D E+P + G GI + + + M+ LSGG+K++ AL L+F+I PAPF++ DEIDAALD VA I +K+ Q I + + E AE G+ Sbjct: 1055 ERYDRFMSAFEHVSTKIDDIYKELANNPSAQAFLGP--------EDAEEP---------YLG-GINYNCVAPGKRFRPMDNLSGGEKTVAALALLFSIHSYQPAPFFVLDEIDAALDNTNINKVARHIINQTKEYFQCIVISLKEEFYTRAEALIGI 1193
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Match: smc3 (structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:100049276]) HSP 1 Score: 1145.18 bits (2961), Expect = 0.000e+0 Identity = 621/1221 (50.86%), Postives = 871/1221 (71.33%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS---------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MYIK+VIIQGFRSYRDQT F P HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE + +R A + D +E+ ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L+E +P++ + + KE+ + L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ C FYT VEVTAGTRLFYH+VE +E+ KIL E NK N PGE+ F P+++L R++ YPETNDAIPM+S+L + F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N E +++ I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +QR VD LN+ I+ L ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL I++R++ + + + + + E + +E ++ EK+ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ T+KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR++ELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DEE + SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+DMI L+ AQFITTTFRPE+LE+A++FYGVKFRNKVSHID ++ E+A DFVEDD THG Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEERGISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAYPETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDMRKAEEELTELEAKLNENLRRNI----ERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRVKETLSRSEDLDSLIDKTEGEIKDHIKSMERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEEGGADSERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKDFVEDDTTHG 1216
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Match: smc3 (structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:100049276]) HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0 Identity = 554/1162 (47.68%), Postives = 789/1162 (67.90%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQK-----RKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPS---------SSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVA 3540 MYIK+VIIQGFRSYRDQT F P HN+IVGRNGSGKSNFF AIQFVLSDE+SHL P++R+ LLHEGTGPRV+SA+VEIIFDNSDNR+P DK EVSLRR+IG KKDQYFLDKKMVTK DVMNLLESAGFSRSNPYYIVKQGKI Q+ATAPD+QRLKLLREVAGTRVYDERKEES + KE+E K ++INELL I++RL TLE E +EL +YQK D+ RR+LE+TI+++EL + + KLDE+ +RE + +R A + D +E+ ER R+L+ K M +E EQ+ + E++++R +L+L D + G + R R K+ Q+++ KI++ QK L+E +P++ + + KE+ + L+ A R +L+AKQGR +QF S+ +RD+WIK+++KSL++AI DK+ I + +++ E + + + + ++ V+ +E + ++ +++ +KDE+Q++R ++R+E+ QQ L R++L + + LR+ TGK+ILNG+DS+ +V+E FR K G + HV+ GY+G ++ C FYT VEVTAGT V+E+ +L DAIPM+S+L + F H FGKTL+CRS+E++T LA+ DC+TL+GDQVS RG LTGGYYD R SRLELQK ++ E+E + EN+++N + +L I+++++++Q+ ET + K + + D + ++ + KE++ + K+ L SL L M+ TRES + ELGTDLL+QLS +QR VD LN+ I+ L ++ ER+ LE T ET L+ NL ++ DQ+E E+ E+ ET+ L EL I++R++ + + + + + E + +E ++ EK+ D+I D + LEKM ++Q LLKKKEE ++KIRE+GSLP +A EK+ T+KQL++ L++ N E+K+YSHVNKKALDQFV+++E+KEKL+KR++ELD+G+++I++LM L+ +KYEAI LTFKQVS F E+F+KLVP G+A L+++KG + + DEE + SS+P V++FTGVGI VSFTG +M++M QLSGGQKSLVAL LIFAIQKCDPAPFYLFDEID ALD Q+RKAV+ Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEERGISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRK-GINQHVINGYHGIVMNNFECEPAFYTCVEVTAGT----SVLEDHKL------------------------------------DAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDMRKAEEELTELEAKLNENLRRNI---EHILYERIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRVKETLSRSEDLDSLIDKTEGEIKDHIKSMERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEEGGADSERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVS 1118
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Match: smc2 (structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:101160532]) HSP 1 Score: 127.102 bits (318), Expect = 4.638e-29 Identity = 76/231 (32.90%), Postives = 129/231 (55.84%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS-DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSD-NRIPF-----DKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELL-SSIDDRLRTLESETKELKEYQKCDRDRRSL 765 MYIK +II+GF+SY +T FDP N I G NGSGKSN +I F+L SH+ +L+++ + A V I FDNS+ ++ P D+ V+ + +IG + ++Y ++ T V +L S G + +NP++++ QG+IT++ + L ++ E AGTR+Y+ +K +++ ++ EAK+ +I +L I ++ L+ E EYQK R+ + L Sbjct: 1 MYIKSIIIEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSHVRASNLQDLVYKNGQGGITKATVSITFDNSNKSQSPLGFETHDEITVTRQVVIGGR-NKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYECKKISAQRTIEKKEAKLREIQTILDEEITPTMQKLQEERSSYLEYQKLMREIQHL 230 HSP 2 Score: 97.8265 bits (242), Expect = 4.704e-20 Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGV--GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVS 3672 I+ ++ LD +K EA+ L +++V+ F IF L+P A+L ++G GV G+E GD +++ +LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ + +QF+ + + M A + KF + +S + + + Sbjct: 1015 ILQTIEELDQKKNEALNLAWQKVNKDFGSIFSTLLPGATAKLAPQQG-----------------------CGVLDGLEFKVALGDTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFRRSQFVVVSLKDGMFTNANVLFKTKFVDGMSTVTRTA 1172
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Match: smc2 (structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:101160532]) HSP 1 Score: 125.176 bits (313), Expect = 1.791e-28 Identity = 181/747 (24.23%), Postives = 319/747 (42.70%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLS-DEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSD-NRIPF-----DKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLAT----------------------------APDNQRL-----------KLLREVAG-TRVY--------DERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKEL--KEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKA-----AKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAI------PMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRL 2127 MYIK +II+GF+SY +T FDP N I G NGSGKSN +I F+L SH+ +L+++ + A V I FDNS+ ++ P D+ V+ + +IG +++Y ++ T V +L S G + +NP++++ QG+IT++ P Q+L KL+RE+ +R+Y +E K +S + K + + ++ +S + +++ L ++ +EL K Q+ + + ++LE + L ++R +D + QSS LD++K KK + ++ +E D + L +KE ++ EQ+Q++ E + +L+ +K G +D + L Q + + E K E AK+ +M +H + EL KQ + + S ++D+ D ++ +++++++ ++ N G E E++ E+ R+L R EV ++T R S+ +LR E E K +L L SV V Y T +E V AG RL+ VV+ E K+L+ K P+N++ A+ ND + +S + +++ + M + FG TLVC +++ A +A K + VTL GD +GTL+GG Q S L Sbjct: 1 MYIKSIIIEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSHVRASNLQDLVYKNGQGGITKATVSITFDNSNKSQSPLGFETHDEITVTRQVVIGG-RNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEVCTLFDEKKSIIETLLLILDEEITPTMQKLQEERSSYLEYQKLMREIQHLSRLYVAWLFVCAEETKVKSAENLKVMQGNIVKMQAKVSENESKIQELSAQIQELQKKNDQEVNGELKTLEMS-----LASVQR-----EDAKAQSS---LDLKKQNLKDETKKRKELVKSMEEDKKVLVVKEKEVSKLSEQLQALQVEGQKNTAELEAAEQHFKAVSAG-----LSTNEDGEEATLAGQMMACKNEMSKADTE---AKQAQM-----TLKHAQAELKTKQAEMKKMDSGYKKDQ--------------DTFKAVKSSREKLEAELAKL----NYEDGKE----------ESLMEKRRQLSR---EVAQLKETFDRLMSR----FPSLRFEYKDPERGWDRSKVKGLLANLISVSDV-----------------SYATALE-------------VVAGGRLYNIVVDTEVTGKKLLE---KGELQRRYTIIPLNKISAK-----TLNDKVGEDNVHTALSLVGYESDLRKAMEYVFGSTLVCDTLDNAKKVAFDKQVMTKTVTLGGDIFDPQGTLSGGARSQSASIL 647 HSP 2 Score: 97.8265 bits (242), Expect = 5.185e-20 Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 3136 IIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGV--GIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVS 3672 I+ ++ LD +K EA+ L +++V+ F IF L+P A+L ++G GV G+E GD +++ +LSGGQ+SLVAL+LI A+ PAP Y+ DE+DAALD + + + M++ + +QF+ + + M A + KF + +S + + + Sbjct: 987 ILQTIEELDQKKNEALNLAWQKVNKDFGSIFSTLLPGATAKLAPQQG-----------------------CGVLDGLEFKVALGDTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFRRSQFVVVSLKDGMFTNANVLFKTKFVDGMSTVTRTA 1144
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Match: smc4 (structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:101157474]) HSP 1 Score: 78.1814 bits (191), Expect = 4.810e-14 Identity = 51/147 (34.69%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 3193 FKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 F +++ +E ++ L G AEL L D DP S GI S K + LSGG+K+L +L L+FA+ P P Y DEIDAALD + VA I +K+AQFI + R M E A+R G+ Sbjct: 1065 FNMITNKLKENYQMLTLGGDAEL----------ELVDSLDPFSE----------GIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEIADRLIGI 1191 HSP 2 Score: 60.4622 bits (145), Expect = 1.193e-8 Identity = 144/716 (20.11%), Postives = 303/716 (42.32%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPR-VVSAYVEIIFDNSDNR-------IPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLA-------TAPDNQRLKLLREVAGT-RVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLK---------IQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNEL-------SGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSI-----TGKSILNGLDSVRRVIEIFRE--KFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGT--RLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVY-----PETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLA--KNLNFDCVTLDGDQVSRRGTLTGG 2100 + I ++ + F+SY + G F + I+G NGSGKSN ++ FV + ++ L+H + V S VE+ F ++ IP K VS R + Y ++ K T +V LL S G + +++ QG++ Q+A T D L+ L ++ G+ R+ + +++I +E + +++N + ++ LE E + E+ K + D + ++ + D+++++ + + +++ T ++ + K + ++EK+ + +++ K+ ++ +E A Q DLQ V ++ + +QK+LE+ + + E ++ ++S+A R+++L ++ +V + + E +KE+ L + + KE + +LS ++ R++ +EL A A + +Q L+ S+ L++ R +++ ++ K Q++L L N T ++ + K+ L+ S +V++ + K G + G YG L +L + + ++ G + ++ + + L+E N G F ++++ E PE + + M R+ D+ + TLV + +E AT +A K + VTL G + GT+TGG Sbjct: 65 LMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGDDYEVIPNSKFYVS-RTANKDGSSAYHINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKKPIQVLARRIELLNEQRGEKLNR-VKLVEKEKNALEGEKNKAVEFLKLENDIFKHKSQLYQYYVHDLQQRVVDKEQEKQKILEETKELTEKNAKISQEMEKMNEELKNVEKKQNKINKYIE------------------------------AQKEQFTQLDLQDVEVREKIKHSKNKKKTLQKQLEKEQKKLEEVQSIPSSSEKAISEATARKEDL--EKQKVKEEDKLKEVMESLKEETSGLQQDKEKKEKELMELSKAVNETRSRMDLAQSELDIYLSRHKTALAQLNTAKQTLQTTSDTLKERRAAIKDLEVQIPEKVQELKKDQEELEKLTKMDNETREVVKELREKVDEAKTSLSSNRSRGKVLDALMQLKKTGR----IPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQKCVTFLKEQN----IGVATFIGLDKMKTWEKNMAPIRTPEDSPRLFDMVRVNDDS-VRPAFYFALRDTLVAQDMEQATRMAFQKEKRWRVVTLKGQIIEMAGTMTGG 737
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Match: SMESG000017173.1 (SMESG000017173.1) HSP 1 Score: 1768.44 bits (4579), Expect = 0.000e+0 Identity = 924/924 (100.00%), Postives = 924/924 (100.00%), Query Frame = 1 Query: 946 MIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 MIDEVEQIQSMLSEKLQRREQLQLLVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNLEKMQSKQSQLLKKKEETLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNEEKEKLLKRKEELDKGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG Sbjct: 1 MIDEVEQIQSMLSEKLQRREQLQLLVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNLEKMQSKQSQLLKKKEETLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNEEKEKLLKRKEELDKGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 924
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Match: SMESG000017173.1 (SMESG000017173.1) HSP 1 Score: 1753.8 bits (4541), Expect = 0.000e+0 Identity = 899/899 (100.00%), Postives = 899/899 (100.00%), Query Frame = 1 Query: 1021 VNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNXXXXXXXXXXXXXXXXXTLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNXXXXXXXXXXXXXXXGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 3717 VNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNLEKMQSKQSQLLKKKEETLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNEEKEKLLKRKEELDKGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG Sbjct: 16 VNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAIKDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVRRVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFYTSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFDAKFQNVMLHNFGKTLVCRSIEIATTLAKNLNFDCVTLDGDQVSRRGTLTGGYYDQRFSRLELQKRKQKMEMEIQETENVQQNYITRKEVLDSGINEIIDKLQRKETVRAKHEMTFDKLKKDIYLWKEEQHAKTEAKPQKEWKLTSLRHDLEQMKYTRESYQVELGTDLLTQLSTSEQREVDKLNETIQGLTIKAKEAYTERMCLEAEKTENETLLDHNLMRKKDQLEAEMTEVSETDITERLQEAEDELRAIDERIEADQKQVNSSEEKLAEVQEEKRRLETQLENLRSQEKDYADSIQDDQQNLEKMQSKQSQLLKKKEETLRKIREIGSLPADALEKFNDKTMKQLYKLLDKANREIKRYSHVNKKALDQFVSYNEEKEKLLKRKEELDKGHQAIIDLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGVKFRNKVSHIDQVSKEEALDFVEDDQTHG 914
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Match: SMESG000017172.1 (SMESG000017172.1) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1 Query: 97 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIE 900 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIE Sbjct: 1 MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGTGPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGTRVYDERKEESKQIFKESEAKMDQINELLSSIDDRLRTLESETKELKEYQKCDRDRRSLEFTIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIE 268
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Match: SMESG000036986.1 (SMESG000036986.1) HSP 1 Score: 87.8113 bits (216), Expect = 4.345e-17 Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 3142 DLMKALDHQKYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKDAQFITTTFRPEMLEAAERFYGV 3633 D ++ + Q+++ F ++ +E+++ + G AEL L D DP S GI S K+++ LSGG+K+L +L L+FA+ P PFY+ DEIDAALD + VA+ IK +K+AQFI + R M E A+ G+ Sbjct: 1112 DQLEKMKRQRHQEFTAGFNLITTKLKEMYQMITMGGDAEL----------ELVDSLDPFSE----------GILFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHFKPTPFYVMDEIDAALDFKNVSIVANYIKDRTKNAQFIIISLRNNMYELADCLIGI 1255
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Match: SMESG000022017.1 (SMESG000022017.1) HSP 1 Score: 73.9442 bits (180), Expect = 6.427e-13 Identity = 43/156 (27.56%), Postives = 72/156 (46.15%), Query Frame = 1 Query: 3169 KYEAIVLTFKQVSHYFQEIFKKLVPDGRAELIIRKGKHDDTLLDDEEDPSSSIPEVERFTGVGIEVSFTGGDAQMKDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDPQYRKAVADMIKGLSKD-AQFITTTFRPEMLEAAERFYGV 3633 +Y+ + F V + I+K L + A+ + H++ LD+ I+ + + M+ LSGG+K++ AL L+FA +P+PF++ DEIDAALD VA I+ + D AQ I + + E A+ G+ Sbjct: 1078 RYDRFMNCFNVVVDHIDGIYKNLARNPGAQASLLPTNHEEPYLDE------------------IQFQCVAPGKRFQHMDSLSGGEKTIAALALLFATHNYNPSPFFVLDEIDAALDNTNIGKVASFIREYASDRAQIIVISLKEEFYSRADALIGI 1215 HSP 2 Score: 70.0922 bits (170), Expect = 1.024e-11 Identity = 159/730 (21.78%), Postives = 290/730 (39.73%), Query Frame = 1 Query: 103 IKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSHLSPQERINLLHEGT--GPRVVSAYVEIIFDNSDNRIPFDKTEVSLRRIIGNKKDQYFLDKKMVTKTDVMNLLESAGFSRSNPYYIVKQGKITQLATAPDNQRLKLLREVAGT----RVYDERKEESKQIFKESEAKMDQINELLS-------SIDD-----RLRTL----------------ESETKEL-KEYQKCDRDRRSLEF--TIFDRELKDIKRKLDEIKDRREQSSVNTLDMRKAAKKCADDIEKLERDYRDLRLKEGQMIDEVEQIQSMXXXXXXXXXXXXXXVNDYKTTKRGGANARARAQKDLQRVMLKIQQVQKRLEEIKPQYELARAKEDEMGNSLSDAEHRRKELFAKQGRVNQFQSRTQRDEWIKEQMKSLNKAI----------KDKENTIRKLSDEIDSDIKRIEDLVNELSGAEANMEGVRQELEAVSEELRKLRRQKDEVQADRQTVYRQESKVQQQLNNLRDELNRTEHNLRSITGKSILNGLDSVR-----RVIEIFREKFGSDCHVVQGYYGTLIELINCPDTFY-TSVEVTAGTRLFYHVVENEELVIKILQEVNKHNFPGEINFFPINRLHARESVYPETNDAIPMMSRLTFD------AKFQNVMLHNFGKTLVCRSIEIATTLAKNLN--FDCVTLDGDQVSRRGTLTGGYYD 2109 +K + I F+SY+ + G F I+G NGSGKSN AI FVL + +L + +L+H P +A V I++ N+ + RII N +Y ++ K V + LE ++V QG + +A +R ++ E++ + Y+ KEE +++ +E+ +++ +++ ID+ +L+T E ET E+ KE+ K + S E D ++K ++K+ K REQS + + KKC DI K ++ + K ++D+ K +K+ +AR + + Q + ++Q R+E++K +YEL +++ +S + R EL NQ Q + + + E+ L+ + KD + + + +EI S KR E +NE R+ L+ + E + R +E + +T+ + +++ + EL NL G++ + +S R +IE + F G +G L+E+ Y ++ G + V + ++ +Q + E F P++ L R + P L D A + + G LVC ++E A T+A N V+L+G R G ++GG D Sbjct: 10 LKVIEIDNFKSYKGKQTIGPF-SQFTAIIGPNGSGKSNLMDAISFVLGESTKNLRVKRLNDLIHGANFGQPVAKTASVTAIYEIDQNQ------QSRFSRIIHNNTSEYKINDKSVKIDEYAYQLEQFNILMKAKNFLVFQGTVESIAMKNAKERCQMFEEISKSIEFKAEYERSKEEVRKLEEEATLNLNKKKNIVAERKEAKIEIDEAAKYKKLKTELNTKRIELHLLKLFYNEVETNEIQKEHVKKKEELLSHENKRNEIDEQIKSHRKKV--TKFNREQSGI-----EQEIKKCEQDISKKRPEHIKVHQKLKHLMDK------------------------QKESKKAYESARQQHLAN-QEELAQLQSQMDRIEQLKSEYELKQSQ-------ISVEKGRNLEL-----ETNQLQEYHKLKQKVAEKTSHLSAVLDALSREYNEQKDIYDALERRRNEIASSQKRKESELNE----------SRKRLQKLREYIDSSNRAINEQKEAEETIRVEVESATKRIEEINKELELVVSNL----GEARVEKHESSRAAKKQELIENLKRLFP-------GVHGRLLEMCQPAHRKYQVAITKVLGKYMDAIVCDTQKTAKDCIQYMKDQRIEPE-TFLPLDFLDVRPIDEKLRDIREPPNVHLVLDVIQFEPAIIKKALQFACGNALVCDTVEHARTVAFNTGERKKTVSLEGTLFQRSGVISGGASD 666 The following BLAST results are available for this feature:
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Structural maintenance of chromosomes protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Structural maintenance of chromosomes protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30003593 ID=SMED30003593|Name=Structural maintenance of chromosomes protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3778bpback to top protein sequence of SMED30003593-orf-1 >SMED30003593-orf-1 ID=SMED30003593-orf-1|Name=SMED30003593-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1208bp MYIKKVIIQGFRSYRDQTCPGEFDPHHNIIVGRNGSGKSNFFQAIQFVLSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|