Collagen type IV alpha 2 chain
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30003562 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 31Note: Hover over icons to view figure legend
Homology
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Match: COL24A1 (collagen type XXIV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:20821]) HSP 1 Score: 143.665 bits (361), Expect = 1.799e-33 Identity = 242/758 (31.93%), Postives = 327/758 (43.14%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDL---GPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLG------RKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLM---------GSRGPQGVSGEPGSPGDAGVN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQ--SFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELS 4696
+G PG+ G GLPG+PG+ G +G +GP G++ GP G G G QG GA+G G G +G G+ G G G G++G +G G +G PG G G G G G G G +G G G G +G+ G+ G +KG G IGP GE G GP GK G G +G G +G+ G GLM G RG QG G G PG G + G GP G G G G+ G G +G KG +G+ G GA G+ G G PG G G +G+ G +G KG G GP G+ G+ G G +G KG++G G G G+ G GP G +G GI+G PGR G G G PG G S GLPG G+QGP GE+G G PGI G G RG G G G G G+PG+ G + L G +G PG G G G G G GP G RGN GP G G++GP G G GE R I+ E ++ S + + +D ++ +F ++ ++N + I+ P G +D+ AR C D+ ++ +DG+Y+IDPN G D+IEV C FS +TC+ V + +LE + + QMNFL +S++ I C + + ++ S
Sbjct: 977 QGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKG---------------------------SSGLPGSPGIQGP---------KGEQGLPGQPGIQGKRGHRGAQGDQGPC---------------------------GDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGE-----KGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESNTALQMESYQNTEVTLIDHSEEIFKTLNYLSNLLHSIKNPLG-TRDNPARICKDLLNCEQKVSDGKYWIDPNLGCPSDAIEVFCNFSAGGQTCLPPV--------------------SVTKLEFGVGK-----------VQMNFLHLLSSEATHIITIHCLNTPRWTSTQTS 1634 HSP 2 Score: 115.546 bits (288), Expect = 6.041e-25 Identity = 204/523 (39.01%), Postives = 250/523 (47.80%), Query Frame = 2
Query: 2537 IDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXX----------------XXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNP------GPKGETGLMGPIGPVGEDG 4039
+ G G+ GP G GP+GQ G+ GP G+ G +G G GE G +G RG G G TG+ GERG G G G G G ++G+ G G +G G +GP GE G GP G G G +GE G KG G G +G G G+ GEPG+PG+ G+ G G++G+PG G GE G KG++GL G G GR G+ G PG G G GQ G G KGD G +GP GE G GP G G G +G G +G+ G+ G G +GE GI G G +G+ GP GLPGP G G G+D P G G G VG PGL G G QGP G G QGE G +G+RG G G G GP+G GI G G G G G G G G G G GK G PG +G G+ G+PG G GS G PG PG+ GP+G++G P G +G G G GP G+ G
Sbjct: 907 LPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTG---------------------------DRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ---------------GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVG---SRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPG 1384 HSP 3 Score: 110.923 bits (276), Expect = 1.493e-23 Identity = 175/514 (34.05%), Postives = 214/514 (41.63%), Query Frame = 2
Query: 2534 GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKG---SVGPIGPDGEKGDVGPLGKTG---------LKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG------RIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G G+EG IG G+LGPRG+ PG +G G G G GE+G +G+ GK G GP G G E G+ G +G KG S GP+GP GEKG +G G G L G G G GS+G G GSRGP G+ GE G G G +G++G +G GLIG TG PG + G G PG TG G G+PG++G +GD +GP GE G++ GP G EGE G+QG PG KG++G G G G G G+ GAPG GL GK GL+G GG G GE GE+G+ G PGI G +G+ G G G +G VG PGQ+G KG KG G G VGS+G PG G +GP+G RG G G GLMGP G
Sbjct: 804 GTQGEEGPIGAFGELGPRGK---PGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG---------------------------------------------EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKG------------------------------EKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGD---VGPPGEMGME---------------------------GPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEE---------------GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTG------------------------------LPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDG 1164 HSP 4 Score: 109.768 bits (273), Expect = 3.941e-23 Identity = 227/577 (39.34%), Postives = 274/577 (47.49%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---------------PGPQGIRGARGQSGPTGELGSK---------------GDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDV------GPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGS------------------PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---GVKGDIGLIGPTGAP------GRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNM---GQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGK---RGNPGPKGETGLMG 4012
GP G GP+G+PG G+ G +G G KGD G +G +G PGP G+RG G SG TG+ G + G G+ GP+GP G G RG PG G G G GPIG G E G RG G+KG G GP+G KG+V G +G+TG G GEVG+ GS G+ G GS GP G GE G PG G G G QG +G +G GP G+ G G G +GEK G +G GLIG TG P G+ G G PG TG G G+PG++G +GD +GP GE G++ GP G EGE G+QG PG KG++G G G G G G+ GAPG GL GK GL+G GG G GE GE+G+ G PGI G + GQ G GP GIVG G RG+PG G G IG G GSRG GK+G+ G KG R G +G+ G +G +G GEPG PG G QG+ G PGPKGE G G
Sbjct: 687 GPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFG---------------------ELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGD---VGPPGEMGME---------------------------GPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEE---------------GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGAR---GTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194 HSP 5 Score: 100.523 bits (249), Expect = 2.484e-20 Identity = 202/550 (36.73%), Postives = 253/550 (46.00%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE---LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---------------KGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGE---PGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXX------------XXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG +G GL G PG+ G G G G G G G PG QG+ G G GP G +GS G+ G+ GP+G G G RG G KG +G G G GP G DG +G VGP+G G G G +G+ G++G G+ G +G QG +GE PG PGD G G G G +G GP+G G G+ G GP G +G GDIG+ PG+ G GP G G G G PG+KGT+G+ G +G GE G RGKPG++G G GP+G++GE+G QG G+ GE GP+GLPG VG +G G+ G G G G G GP+G GLPG G +GP G +QG G+RG RGP G+ G G +G G G +G RG G +G+ G GER +G G G G+ G +G PG PGL G Q G+ GP GE G+ GP G GE G
Sbjct: 561 GPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGF---------------------------------------KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGI------PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELG---------------PRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG---SQGPKGQRGSRGPDGLLGEQGIQGAKGEKG------------------------DQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ---GDVGPPGEMGMEGPPGTEGESG 1020 HSP 6 Score: 81.2629 bits (199), Expect = 1.769e-14 Identity = 172/521 (33.01%), Postives = 216/521 (41.46%), Query Frame = 2
Query: 2504 RGPSGLP---GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGP G+P G PG+ G G GPKGD G PG +G +G G GP G G KG +G G G G++G + G G G G G +GL G +G+ GP IG GE G +GP G+ G+ G RG+ G KG +G G G RGP G+ G PG + G GP G G++G +G +GP IG AG PG G SG +G PG+KG KG+ G G GE G G +G +G+ GPPG +G+ GP G G PG G SG G +G G G+PG+ G +GP +G G RG GPPG+ G G+ GP G G + G GK G+ G GE +G+KG G G +G GE GP GL G G G+ G KGE G GP+GP GE G
Sbjct: 512 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQG---------------------------------IPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG------------------------------LVGGTGPPGFPGLRGSVGPVGP------IGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYP------------------------------GDKGAVGLPGPPGMRGKSGPSGQTG------------DPGLQGPSGPPGPEGFPGDIGIPGQNGPEGP------KGLLGNRGPPGPPGLKGTQGEEGPIGAFGEL---------------------------GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKG 888 HSP 7 Score: 70.4774 bits (171), Expect = 3.821e-11 Identity = 190/552 (34.42%), Postives = 235/552 (42.57%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG------------SGTQGEAG------ERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI------KGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RGP G GP G PG PG+ G +G PKGD G PG +G +G G GP G G KG +G G G G++G + G G G G G +GL G +G+ GP IG GE G +GP G+ G+ G RG+ G KG +G G G RGP G+ G PG + G GP G G++G +G +GP IG AG PG G SG +G PG+KG KG+ G G GE G G +G +G+ GPPG +G+ GP G G PG G SG G +G G G+PG+ G +GP G GTQGE G E G RG PG G G+ GP G G VG G G+ G GP+G G G GS G G+ G PG G + KG+ G PG IG + G G GPPG GP+G+RG+ GP G G G G GE G+
Sbjct: 512 RGPRGIPGPHGNPGLPGLPGPKG---PKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQG---------------------------------IPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG------------------------------LVGGTGPPGFPGLRGSVGPVGP------IGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYP------------------------------GDKGAVGLPGPPGMRGKSGPSGQTG------------DPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGD 949 HSP 8 Score: 63.5438 bits (153), Expect = 3.803e-9 Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV------KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
YKG G+ G GA G GP G+ G +GE G+KG KG+ G GP G GI G++G +G +G G G DG G+ G +GPPG G PGI+G G G G G
Sbjct: 1226 YKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPG 1333 HSP 9 Score: 62.3882 bits (150), Expect = 8.906e-9 Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
G +G RG GA+GD GP G G +G+ G GV+G G QG P+GPEG AG+ G G +G G RG G G EG +GP G G G KG RG
Sbjct: 1363 GIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456 HSP 10 Score: 59.6918 bits (143), Expect = 7.075e-8 Identity = 48/102 (47.06%), Postives = 58/102 (56.86%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+ GARG GS G KG G G G GE G++G KGE G QG RGP G+ G G+ GE G +GK G +G GS G G G PG++G +G VG G G
Sbjct: 910 HVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGN---PGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMG 1008 HSP 11 Score: 56.9954 bits (136), Expect = 3.944e-7 Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------------KGDIGIQGETGPRGKDGNK---GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G++G GAKGD G +G VG GE G++G G G +G +G +G+ GV KG++G+ G GP G+ G G EG VG PG G PG KG +G +G G G +
Sbjct: 1016 EGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSR 1133 HSP 12 Score: 56.6102 bits (135), Expect = 5.619e-7 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG +G G +G G +G G GE G++G++G+ G G G EG G +G+ G+QGE G +G G G G G PG G PG G G QG+DG K
Sbjct: 966 GERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEG---LQGKDGLK 1064 HSP 13 Score: 55.8398 bits (133), Expect = 1.013e-6 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+GA+G +G G +G HG G+ G GE G +G G G+ G G G+ G G G+QG+ GP G+ G +G G+ G G G PG KG G G+ G GE
Sbjct: 941 QGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGE 1042 HSP 14 Score: 55.4546 bits (132), Expect = 1.361e-6 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
++G G++G G+ GD G G+ G RG G G GE G++GP G EG +G+ KGD+G G G G+ G +G+ G+ G G G G+KG G G G DGEK
Sbjct: 970 FQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEK 1079 HSP 15 Score: 55.0694 bits (131), Expect = 1.557e-6 Identity = 113/275 (41.09%), Postives = 131/275 (47.64%), Query Frame = 2
Query: 3215 PGRIGEAGPPGKTGASGAEGQPGVKGTKGDTG------ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPP------GLTGPQGKRGNPGPKGETG 4003
G+ G G PG G G G PG KG KGD G + G +G+QGL G +GP G +G KG +G PG G G G G G +G G PGR+G GP G PGP G G G PG+AG GP G G G G++G +G G G+ G RGP G G G G G PG G G +G GP G G+ G +G G KG L GIKG G G G GEPG P GL GP G RG GP G+TG
Sbjct: 509 SGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFI------------------------GSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKG---LPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTG 756 HSP 16 Score: 54.299 bits (129), Expect = 2.537e-6 Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDI---GIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGS---RGPVGNQGRDGE 2134
+G +G RGS G KG G G G G G++G+ G GIQG G +GI+G G I G QG G RG G G G+ GPPG G+ G+ GS +GP G QG G+
Sbjct: 1254 QGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQ 1361 HSP 17 Score: 53.9138 bits (128), Expect = 4.032e-6 Identity = 45/99 (45.45%), Postives = 55/99 (55.56%), Query Frame = 2
Query: 1859 GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGI------QGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G KGD G SG +G G G KG+KG G+ G G +GI G G+IG QG GP G G KG +G +G PG AG G +G RG G +G+ G K
Sbjct: 549 GEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFK 647 HSP 18 Score: 53.5286 bits (127), Expect = 4.813e-6 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKG---DIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G +G G G+ G GP G+ G G+ G++G +G G QG +GP G G+KG + G+QG TG +G G KG EG G G +G G G RG G GR+G
Sbjct: 1336 GVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREG 1438 HSP 19 Score: 53.5286 bits (127), Expect = 5.415e-6 Identity = 98/292 (33.56%), Postives = 122/292 (41.78%), Query Frame = 2
Query: 3167 EKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
++G +G G G G PG G GP G G S + PG KG +G +G++GP G QG KG +G PG G G G G G +G G PGR+G GP G PGP G G G PG+AG GP G G G G++G +G G G+ G RGP GLDG G G G G++GS G +G +G G PGP GL+G +G G G KGE G G +G G G+
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG------------DKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFI------------------------GSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGP---------------------------------AGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGD 733
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Match: COL27A1 (collagen type XXVII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22986]) HSP 1 Score: 120.939 bits (302), Expect = 1.425e-26 Identity = 251/794 (31.61%), Postives = 322/794 (40.55%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKG------------DVGPLGKTGLKGTRGEVGI---KGSEGKTGLMGS------------RGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEG-------------------------------------QPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPI---------GPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRT-PGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
E G+ G G KG +GP+G GE+G D GP+G GLKG RG+ G G +G+ GLMG RGP+G SG+ G G G G KG QG+ G G G G G G KG G +GPTGAPGR+G G PG G G +G G +G GD G G G QGL G G G G G RG PG +GS G GP+G +G+ G PGR+G G GLPGP G G G +G GP G G+ G G G G G G GPAG G G AG G +GPPG G G G GP G G +G GL G GEPG KG+ G G PG G G KG PG G G QG RG PG G+ G++GP+ GP G+ G G G GP GPPGP G G PG G + + G+ S + +D +F + ++N I+ I+ P G K++ AR C D+ ++ DG Y++DPN G D+IEV C F+ +TC+ + + ++E AISR QMNFL +S+ Q I C ++ E + + K A + + + + G+ F + DGC + + F T D LPII + G L V CF
Sbjct: 1157 EPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPG---------TPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA---PGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------------------KRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPGGPIQLQQDDLGAAFQTWMDTSGALRPESYSYPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLG-TKENPARVCRDLMDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPI--------------------TASKVEFAISR-----------VQMNFLHLLSSEVTQHITIHCLNMTVW--QEGTGQTPAKQAVRFRAWNGQIFE-AGGQ----------------------FRPEVSMDGCKVQDGRWHQTLFTFRTQDPQQLPIISVDNLPPASSG-KQYRLEVGPACF 1859 HSP 2 Score: 71.633 bits (174), Expect = 1.344e-11 Identity = 172/497 (34.61%), Postives = 208/497 (41.85%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPG---------PQGIRGARGQSGPTGELGSKGDRGKF---------------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGR---------------KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGI------------KGSEGKTG-------------LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPR---GEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---------GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
+GPPG G GLPG+ G+ G G +G G+ G GQ G PG P G++G RG GP GE G KG G GP+G +G +GE+G G++G KG +G LG KGS G +GP G G +G G+ GL G G GI KG +G+ G +G RG +G G+PG PG GV G RG+ G +G G GP G PG G G G G G G PG +G +G G+ GPR G QGL+G GP G G G G+ G QG G+ GP GV G G QGPPG KGE G G GP G G G+ G PG G G G G G G PG AGL GP G G G G +G RGPPG+ MG+ G GP+GI+
Sbjct: 1149 KGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGA------------------------------------KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQ---------------------------GLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGL---MGKEGIVGPLGIL 1579 HSP 3 Score: 64.3142 bits (155), Expect = 2.685e-9 Identity = 151/414 (36.47%), Postives = 181/414 (43.72%), Query Frame = 2
Query: 2525 GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP------GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
G PG+ + G KGD+G G SGNPGP G +G +G GP G G++G+ GP+G G K G G G G VG GP G +G +G G GL G+ GE G+ G GK G MG G GV GE G PG G G +G+ G PG PG G+ GV G IG GP G G +G G P G+ G G G PG +G KG G+ G G +G GPLG +G KG G G PG +G G+ GP G G G++G PG +G GP G GP G GP G GAPG G PG+ G G G G +GE G+ G GP G G MG G G GIV
Sbjct: 676 GDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGH---PGEQGQPGPEGSPGAK------------------------------------------------GYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDG---------------NPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLE---------------GQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIV 1008 HSP 4 Score: 63.5438 bits (153), Expect = 4.376e-9 Identity = 113/278 (40.65%), Postives = 141/278 (50.72%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI---RGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDI---GLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILG 3319
RG G PG PG G+EG G +G G +GQ G+PGP+G +G++G GP G+ G G G+ G QG G G RG G QG G AGP+G G G G +G +G G+PGP GP G++G G+ G G+ GP G GE G G LG G +GT G G+ G++G+ GS+G G SGE G PG AG+ G KG GDI G+ GP G PG +G+ G G G G G PG KG KG G G
Sbjct: 1354 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEP---GSKGQPGDSGEMGFPGMAGL------------------------------FGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWG 1598 HSP 5 Score: 60.077 bits (144), Expect = 4.664e-8 Identity = 99/288 (34.38%), Postives = 122/288 (42.36%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---------PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQ 3334
G GP G PG G G++G GP GD GP+G G PG G RG G G G++G G G FG +GP G G G G GP G G+ G LG G +G GP G KG +G +G+ GLKG +GE G+ G G G G +G QG+ G PG+ G G P G+ G KG IG GP G G G+ GPPG G G +G+PG +G G G LGP G++
Sbjct: 724 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGN---------------------------------PGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPG------------------------------PLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDE 948 HSP 6 Score: 59.6918 bits (143), Expect = 6.262e-8 Identity = 184/525 (35.05%), Postives = 220/525 (41.90%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE------------LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG---EKGDVGPLGKTGL-------------KGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN 3979
GP GT G GL G+ G G EG GP G G +G G+PGP G G +GQ G GE G +G GK G +G TG KG +G G G G G GP G G G +G G G PG G GE G+ G G KG VGP+GP G EKG+ G GK +G RGE G G G+ G+ G RG G G+PG PG G G KG G GP G + G+AG PG+ G G +G PG +G G G+ G G GL G G G +G +G G PG G G G GV G G QGPPG KGE G G GP G G G+ GL G G G++G+ G+ G+ G PG+AG G +GP G IG +G+ G G PG G+ + G G G G G KG+ G G G QG RG
Sbjct: 1171 GPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGW---------------------------------PGPKGSKGAEGPKG---KQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKR---------------------------GTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGF---------------------------KGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGP 1605 HSP 7 Score: 58.5362 bits (140), Expect = 1.491e-7 Identity = 208/599 (34.72%), Postives = 251/599 (41.90%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPG---IDGKEGSIGPKGD---------------LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR---------------------------------------GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG---------SGTQGEAG----------------ERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG GP G+ GKPG + G G +GP+GD G +G G PG G++G G G G +G +G G G G G GE+GD G GPPG GP G +G G PG G G G GP G G G+RG GR+G GP GP GE+G G G G +G G G +G G+ G +GSR GP G GEPG PG+AG +KGD+G +G G G IG+ G PG G SG G G+KG +GD GP GE G G G +G G G G G +G G SG QG +G G +G G +G+LG +G+PG G G G G+ G G +G G G G PGL G G +G G G QGE G +RGDRG PG G GQ G G RG G+ G+PG G R G KGS G G G +G+ G PG G QG +G PGP+G G G G G DG
Sbjct: 916 GPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAG------------------------------------MKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDP---GPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG------------------------------LRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDG 1445 HSP 8 Score: 56.225 bits (134), Expect = 8.305e-7 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G+ G +G KGD GP +GT GE G+ G +GE G++G GP G G+KGD +G+ GP G+ G KG EG +G G G PG+ G RGP G G+ GEK
Sbjct: 1156 GEPGLPGEAGMKGDLGP---LGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGD---RGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEK 1251 HSP 9 Score: 55.4546 bits (132), Expect = 1.115e-6 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+KG G G G +G GP G G +G G +G+ G G GP+G G G+ G G+ G G RG G G G +G PG+ PG+ G RGP G G GE
Sbjct: 710 HKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGF---PGVFGERGPPGLDGNPGE 809 HSP 10 Score: 55.0694 bits (131), Expect = 1.629e-6 Identity = 44/103 (42.72%), Postives = 53/103 (51.46%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G +G SG G GP G+ GT G G+ G +GE G +G G G G G G+ G GP G G KG +G GPPG G GI G G +G G G K
Sbjct: 1486 QGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPK 1588 HSP 11 Score: 54.6842 bits (130), Expect = 2.262e-6 Identity = 137/402 (34.08%), Postives = 164/402 (40.80%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTK---GDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---PGPKGETGLMGPIGPVGEDG 4039
KG G G G G GP+G G G G+ GL G G+ G KGS G GL G+ G PGS G+ G+ GV G G +G G PG GE GPPG G G G PG G GD G+LGP G G P+G++G +G G PG KG+ G G+PG G G G G+ G PG PG G GP G G +G G G GP G G++G G NGP G+ G G+RGL G G+ G +G+ G G+PG G G KG PG PGL G +G+ G+ PGP GE G MG IG VGE G
Sbjct: 710 HKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL------PGLFGLPGSDGERGL---------------------------------PGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPG------------------------------PKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGL---------------PGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGM---------------------KGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPG 1006 HSP 12 Score: 54.299 bits (129), Expect = 3.088e-6 Identity = 58/166 (34.94%), Postives = 79/166 (47.59%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIK 2983
+GPPG +G SGLPG+ +GP G G G++G PG QG G++GQ G +GE+G G G FGP+GP GD G + G G +G GL+G++G VGP+G G G GP G KG+RG+ G++
Sbjct: 1486 QGPPGFKGESGLPGQ---------LGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFK---------------------------------------GIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGD---KGSRGDWGLQ 1600 HSP 13 Score: 53.9138 bits (128), Expect = 3.248e-6 Identity = 46/112 (41.07%), Postives = 58/112 (51.79%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDG---------NKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ G RG G G+KG GP G+ G G G +GV+G G+ GPRG + G +G GI G G G+DG + GD G +GP G GNPG+ G G G G GE
Sbjct: 1386 HPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRG---VVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGE 1494 HSP 14 Score: 53.9138 bits (128), Expect = 4.043e-6 Identity = 46/103 (44.66%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ GA+G G G G+ GP G+ G +G G G GE QG GPEG G KG G QG GP G G KG G +G PG G PG G RG G G+ G+
Sbjct: 686 HDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGE---QGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGK 785
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 115.161 bits (287), Expect = 8.275e-25 Identity = 68/263 (25.86%), Postives = 116/263 (44.11%), Query Frame = 2
Query: 4226 FVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGER-LGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ D + +F ++ + I+ ++FP G + + ARTC D++L DG+Y+IDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G + D+ ++ QM FL+ + + Q + C QS + +D S K R LG N+ M + F T+ YDGC R + ++ T + +PI+D IND+ ++ G V +CF
Sbjct: 1456 YSDGMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAW-------------------YDVSSGSYDKALRFLGSNDEEMS-------YDNNPFIKTL-YDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQN-QKFGFEVGPVCF 1688 HSP 2 Score: 108.227 bits (269), Expect = 1.043e-22 Identity = 69/275 (25.09%), Postives = 114/275 (41.45%), Query Frame = 2
Query: 98 WN*NLYLYQFSGPITTMLNITSLKRGVXXXXXXXXXXXXXXXXXXTQALSYRDGV-VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
W +L+ F+ T L +T L QA R VD+L A+ + G + FC N + A+R L A + LF G FP++FSIL T K + + SI N++ + V GR + D P+ + L ++ DG+WHR+A SV+K +V++++DC+ + L+R+ + + G + F G + L+ G A+ C+ Y+PDC++ Q P
Sbjct: 8 WKTKRWLWDFT---VTTLALTFL----------------------FQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDY-PLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEP 256 HSP 3 Score: 70.4774 bits (171), Expect = 3.358e-11 Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +G++G+KG +GE G GPRG +G G KG G G+ GP G+ G KG G G PGY G G KGS G G G +GEK
Sbjct: 649 KGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK 751 HSP 4 Score: 60.077 bits (144), Expect = 4.516e-8 Identity = 48/108 (44.44%), Postives = 57/108 (52.78%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---------GYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G G KGD G GQ+G RGE G +G KG G G GP G AG KG +G+ G G G+ G KG G G P G AG PG +G RGP G +G G +
Sbjct: 671 GFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGAR 778 HSP 5 Score: 56.6102 bits (135), Expect = 5.654e-7 Identity = 137/437 (31.35%), Postives = 165/437 (37.76%), Query Frame = 2
Query: 2585 RGQSGNPGPQGIR------------------GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG---------------------------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
+G+SG+PGPQG R GA G G GE G+KGDRG G G GDKG R G G +G G G+ G +G GE G RGL G G G +GP G G G G G+ G G G KG +GK GL G G G G PG G +G G +G G G G G +GVKG G+ G G+ G GE G P G +G G+KG +G+ G +GPRGE G + GP+G G G GP G+ GE G +G+PG PG PG+ G +G G G G GE+G RG G G GQRGP GP G
Sbjct: 436 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR---------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK---------------GALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP------GFKGDMGLKGDRGEVGQIGPRGEDGPE---------------------------GPKGRAGPTGDPGPSGQAGEKGKLGVPG------------------------------LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 773 HSP 6 Score: 55.0694 bits (131), Expect = 1.676e-6 Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
G G +G +G GD GPSGQ G +G++G+ G+ G G QGP+G G G G G +G G GK G +G G GP G +G+RGP G G
Sbjct: 695 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS------RGARGPTGKPG 785 HSP 7 Score: 54.6842 bits (130), Expect = 1.886e-6 Identity = 149/391 (38.11%), Postives = 178/391 (45.52%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR---GNPGPKGETGLMGPIGPVGEDG 4039
G G GP GP G +G G TG G RG G G G G G++G +G G PG PGD G G +G G PGP G+ G++G+ G IGP G P GEAGP G G G G PG G G G GP+G G G GP G +G G +G PG QG G G +G +G+ G+ G PG G G G G G G G G GP G G G G G GL G G +G G G +G+ G +GDRG G G G+ GP GP G G G G G+ G+KG+ + G+ G PG G GS G PG PG G +G R G PGP+G+ G GP G G G
Sbjct: 437 GESGDPGPQGPRGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLP---GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA------------------------GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG 779 HSP 8 Score: 53.5286 bits (127), Expect = 5.095e-6 Identity = 112/296 (37.84%), Postives = 135/296 (45.61%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSG------NPGPQ------GIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
RG G RG G PG+PG+ G +G GPKG++GP+G+ G NPGPQ G G G+ GP G+ G G G GP G G +G+ G+ G+ GPPGP GP G G G G GVRGL G KG G G G KGD+ GLKG RGEVG G G+ G G +G G +G+PG G A G KG +G+ G G PGR GP G TG G G G KG +G G GPRG++G
Sbjct: 535 RGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGA------------------DGVRGLKGSKGEKGEDGFPGFKGDM------GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQA------------------------------------GEKGKLGVPGLPGYPGR---QGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 767
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 114.005 bits (284), Expect = 2.115e-24 Identity = 68/263 (25.86%), Postives = 116/263 (44.11%), Query Frame = 2
Query: 4226 FVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGER-LGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ D + +F ++ + I+ ++FP G + + ARTC D++L DG+Y+IDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G + D+ ++ QM FL+ + + Q + C QS + +D S K R LG N+ M + F T+ YDGC R + ++ T + +PI+D IND+ ++ G V +CF
Sbjct: 1533 YSDGMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAW-------------------YDVSSGSYDKALRFLGSNDEEMS-------YDNNPFIKTL-YDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQN-QKFGFEVGPVCF 1765 HSP 2 Score: 106.686 bits (265), Expect = 2.920e-22 Identity = 69/275 (25.09%), Postives = 114/275 (41.45%), Query Frame = 2
Query: 98 WN*NLYLYQFSGPITTMLNITSLKRGVXXXXXXXXXXXXXXXXXXTQALSYRDGV-VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
W +L+ F+ T L +T L QA R VD+L A+ + G + FC N + A+R L A + LF G FP++FSIL T K + + SI N++ + V GR + D P+ + L ++ DG+WHR+A SV+K +V++++DC+ + L+R+ + + G + F G + L+ G A+ C+ Y+PDC++ Q P
Sbjct: 8 WKTKRWLWDFT---VTTLALTFL----------------------FQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDY-PLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEP 256 HSP 3 Score: 70.4774 bits (171), Expect = 2.961e-11 Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +G++G+KG +GE G GPRG +G G KG G G+ GP G+ G KG G G PGY G G KGS G G G +GEK
Sbjct: 726 KGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK 828 HSP 4 Score: 60.4622 bits (145), Expect = 4.217e-8 Identity = 48/108 (44.44%), Postives = 57/108 (52.78%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---------GYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G G KGD G GQ+G RGE G +G KG G G GP G AG KG +G+ G G G+ G KG G G P G AG PG +G RGP G +G G +
Sbjct: 748 GFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGAR 855 HSP 5 Score: 57.3806 bits (137), Expect = 3.210e-7 Identity = 137/437 (31.35%), Postives = 165/437 (37.76%), Query Frame = 2
Query: 2585 RGQSGNPGPQGIR------------------GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG---------------------------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
+G+SG+PGPQG R GA G G GE G+KGDRG G G GDKG R G G +G G G+ G +G GE G RGL G G G +GP G G G G G+ G G G KG +GK GL G G G G PG G +G G +G G G G G +GVKG G+ G G+ G GE G P G +G G+KG +G+ G +GPRGE G + GP+G G G GP G+ GE G +G+PG PG PG+ G +G G G G GE+G RG G G GQRGP GP G
Sbjct: 513 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR---------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK---------------GALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP------GFKGDMGLKGDRGEVGQIGPRGEDGPE---------------------------GPKGRAGPTGDPGPSGQAGEKGKLGVPG------------------------------LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 850 HSP 6 Score: 55.8398 bits (133), Expect = 8.315e-7 Identity = 149/391 (38.11%), Postives = 178/391 (45.52%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR---GNPGPKGETGLMGPIGPVGEDG 4039
G G GP GP G +G G TG G RG G G G G G++G +G G PG PGD G G +G G PGP G+ G++G+ G IGP G P GEAGP G G G G PG G G G GP+G G G GP G +G G +G PG QG G G +G +G+ G+ G PG G G G G G G G G GP G G G G G GL G G +G G G +G+ G +GDRG G G G+ GP GP G G G G G+ G+KG+ + G+ G PG G GS G PG PG G +G R G PGP+G+ G GP G G G
Sbjct: 514 GESGDPGPQGPRGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLP---GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA------------------------GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG 856 HSP 7 Score: 55.0694 bits (131), Expect = 1.577e-6 Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIK 2092
G G +G +G GD GPSGQ G +G++G+ G+ G G QGP+G G G KG G+ G+ GPRG+ G G GS G G G PG K
Sbjct: 772 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 864 HSP 8 Score: 54.299 bits (129), Expect = 3.067e-6 Identity = 112/296 (37.84%), Postives = 135/296 (45.61%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSG------NPGPQ------GIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
RG G RG G PG+PG+ G +G GPKG++GP+G+ G NPGPQ G G G+ GP G+ G G G GP G G +G+ G+ G+ GPPGP GP G G G G GVRGL G KG G G G KGD+ GLKG RGEVG G G+ G G +G G +G+PG G A G KG +G+ G G PGR GP G TG G G G KG +G G GPRG++G
Sbjct: 612 RGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGA------------------DGVRGLKGSKGEKGEDGFPGFKGDM------GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQA------------------------------------GEKGKLGVPGLPGYPGR---QGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 844
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 113.62 bits (283), Expect = 2.288e-24 Identity = 68/263 (25.86%), Postives = 116/263 (44.11%), Query Frame = 2
Query: 4226 FVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGER-LGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ D + +F ++ + I+ ++FP G + + ARTC D++L DG+Y+IDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G + D+ ++ QM FL+ + + Q + C QS + +D S K R LG N+ M + F T+ YDGC R + ++ T + +PI+D IND+ ++ G V +CF
Sbjct: 1584 YSDGMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAW-------------------YDVSSGSYDKALRFLGSNDEEMS-------YDNNPFIKTL-YDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQN-QKFGFEVGPVCF 1816 HSP 2 Score: 107.071 bits (266), Expect = 2.828e-22 Identity = 69/275 (25.09%), Postives = 114/275 (41.45%), Query Frame = 2
Query: 98 WN*NLYLYQFSGPITTMLNITSLKRGVXXXXXXXXXXXXXXXXXXTQALSYRDGV-VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
W +L+ F+ T L +T L QA R VD+L A+ + G + FC N + A+R L A + LF G FP++FSIL T K + + SI N++ + V GR + D P+ + L ++ DG+WHR+A SV+K +V++++DC+ + L+R+ + + G + F G + L+ G A+ C+ Y+PDC++ Q P
Sbjct: 8 WKTKRWLWDFT---VTTLALTFL----------------------FQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDY-PLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEP 256 HSP 3 Score: 70.8626 bits (172), Expect = 2.516e-11 Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +G++G+KG +GE G GPRG +G G KG G G+ GP G+ G KG G G PGY G G KGS G G G +GEK
Sbjct: 777 KGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK 879 HSP 4 Score: 60.4622 bits (145), Expect = 3.671e-8 Identity = 48/108 (44.44%), Postives = 57/108 (52.78%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---------GYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G G KGD G GQ+G RGE G +G KG G G GP G AG KG +G+ G G G+ G KG G G P G AG PG +G RGP G +G G +
Sbjct: 799 GFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGAR 906 HSP 5 Score: 57.7658 bits (138), Expect = 2.321e-7 Identity = 137/437 (31.35%), Postives = 165/437 (37.76%), Query Frame = 2
Query: 2585 RGQSGNPGPQGIR------------------GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG---------------------------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
+G+SG+PGPQG R GA G G GE G+KGDRG G G GDKG R G G +G G G+ G +G GE G RGL G G G +GP G G G G G+ G G G KG +GK GL G G G G PG G +G G +G G G G G +GVKG G+ G G+ G GE G P G +G G+KG +G+ G +GPRGE G + GP+G G G GP G+ GE G +G+PG PG PG+ G +G G G G GE+G RG G G GQRGP GP G
Sbjct: 564 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR---------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK---------------GALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP------GFKGDMGLKGDRGEVGQIGPRGEDGPE---------------------------GPKGRAGPTGDPGPSGQAGEKGKLGVPG------------------------------LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 901 HSP 6 Score: 56.6102 bits (135), Expect = 6.114e-7 Identity = 149/391 (38.11%), Postives = 178/391 (45.52%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR---GNPGPKGETGLMGPIGPVGEDG 4039
G G GP GP G +G G TG G RG G G G G G++G +G G PG PGD G G +G G PGP G+ G++G+ G IGP G P GEAGP G G G G PG G G G GP+G G G GP G +G G +G PG QG G G +G +G+ G+ G PG G G G G G G G G GP G G G G G GL G G +G G G +G+ G +GDRG G G G+ GP GP G G G G G+ G+KG+ + G+ G PG G GS G PG PG G +G R G PGP+G+ G GP G G G
Sbjct: 565 GESGDPGPQGPRGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR------------------GERGPQGPPGPPGDDGMRGEDGEIGPRGLP---GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA------------------------GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG 907 HSP 7 Score: 55.0694 bits (131), Expect = 1.443e-6 Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
G G +G +G GD GPSGQ G +G++G+ G+ G G QGP+G G G G G +G G GK G +G G GP G +G+RGP G G
Sbjct: 823 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS------RGARGPTGKPG 913 HSP 8 Score: 54.6842 bits (130), Expect = 2.432e-6 Identity = 112/296 (37.84%), Postives = 135/296 (45.61%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSG------NPGPQ------GIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
RG G RG G PG+PG+ G +G GPKG++GP+G+ G NPGPQ G G G+ GP G+ G G G GP G G +G+ G+ G+ GPPGP GP G G G G GVRGL G KG G G G KGD+ GLKG RGEVG G G+ G G +G G +G+PG G A G KG +G+ G G PGR GP G TG G G G KG +G G GPRG++G
Sbjct: 663 RGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGA------------------DGVRGLKGSKGEKGEDGFPGFKGDM------GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQA------------------------------------GEKGKLGVPGLPGYPGR---QGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 895
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]) HSP 1 Score: 119.013 bits (297), Expect = 7.147e-27 Identity = 209/533 (39.21%), Postives = 263/533 (49.34%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGP---------TGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAG---LQGPAGGSG------TQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE------PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
+G PG +G G G+ G +G S G KGD G +G GNPGP+G +GA G G G GSKGD+G G +G TGDKGE+G G++G G G G +G G KG+ G G DG G G G G KG G G KG +G+ GL G +G +G G PG+ GD G G G +G G+ G G G +G+ G KG KG G G G PG G+ G G GA GA+G PG KG KG+ G+ GP+G++G DG G G KG KG G G G+ G+ G +G +G G G PG+KG+ G GL GP G G G GA G G G G G G+PG G G L GP G G ++G+ GE+GD G PG G+ G++G +G G G DG GQ G G G +G DG+ G+ PGQKG++ KG G PG G G KG+ G PG +G+ G PG KG+ G G
Sbjct: 156 KGSPGQKGDKGEKGEKGSNG---SPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTP------------------------------GSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGP------KGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQG-------EKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQ---KGQDGQPGQKGQDGQPG 639 HSP 2 Score: 108.227 bits (269), Expect = 1.514e-23 Identity = 192/545 (35.23%), Postives = 244/545 (44.77%), Query Frame = 2
Query: 2531 PGIDGKEGSIGPKGDLGPRGQSGNPGPQ--GIRGARGQSGPTGELGSKGD------------------------RGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG +GK+G+ G KGD G +G G+ G G++G G GP GE G GD +G+ G G GDKGE+G+ GS G PG G G G G+PG KG KG G G G G KG +G G KG+ G G G+ GD G G G KG +G G GS+G G G+ G +G G PGS GD G + G G G G+KG KG+ GL GP G PG G+ G G GA GA+G PG KG KG+ G+ GP+G++G D G +G G G+ G+ G +G +G G G PG KG+ G GL GP G G G+PG G G +G G G G G +GD+G PG G+ G++G +GP G +G DG G G KGE+ G KG+ GT G+ G KG+ G G G +G G PG KG+ G G IG G+ G+
Sbjct: 79 PGTNGKDGTPGDKGDTGDKGDKGDTGAPGVGVKGDPGAQGPPGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGAD---------------------GAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGAD------------GAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGD---------------------KGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKG---------------------------DKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGD 542 HSP 3 Score: 106.686 bits (265), Expect = 4.765e-23 Identity = 191/537 (35.57%), Postives = 245/537 (45.62%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLG------------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQG---PTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGE 4033
+G PG +GP PG+ G DG +G+ G KG G +G+ G+PG +G +G +G+ G G GSKGD+G+ G G P GDKG G G G G KG +G G KG+ G G G+ GD G G G KG +G G GS+G G G+ G +G G PGS GD G +G KG G G +KG KG+ GL GP G PG G+ G G GA GA+G PG KG KG+ G+ GP+G++G DG G G+ G KG + G +G +G G G PG KG+ G GL GP G G G GA G G G G G G+PG G G G G GT G++GD+G G+ G G +G +G G G G +G G ++G DG G G KG++ L G KG G G GSKG+ G G G G++G+ G KG+ G G G G+
Sbjct: 111 KGDPGAQGP---PGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKG---------------------------------ADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPG---------------------QKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKG------------DKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGT---PGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADG---------------AKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQ 560 HSP 4 Score: 75.8702 bits (185), Expect = 2.065e-13 Identity = 173/415 (41.69%), Postives = 213/415 (51.33%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG---EKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKG--------ELGPIGLPGPVGTXXXXXXXXXXXXXXX---XXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE 3673
G PG++G +G G+ G DG +G G G G +G G G G +GA G G G+ G+ G +G G G GDKGE+G G +G G G G G G G G KG G PG +G GEKG+ G G KG+ G G +G KGD G G G KG G G KG +G+ GL G +G +G G PG+ GD G G G +G G+ G G G G G G G+KG KG+ GL GP G PG G+ G G GA GA+G PG KG KGD G+ GP+G++G DG G G KG KG G+PG++G G G G G+ G G PG+KG E G G PG G G G+ G G G GQ GD G G G PG+ G G G G G+ G+
Sbjct: 226 GNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQKGQDGQPGQ 640 HSP 5 Score: 60.8474 bits (146), Expect = 8.345e-9 Identity = 47/101 (46.53%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KGA G G+ G KGD G G G G G KG KGE G+ GP+G +G G KG G G G +G+ G G +G+ G PG G+ G KG GP G++G DG
Sbjct: 312 KGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADG 412 HSP 6 Score: 57.7658 bits (138), Expect = 6.344e-8 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVG---MKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKD---GNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDG 2131
GA+G G+ GAKGD G G G +G G KG KGE G+ GP+G +G G KGD G +G G +G D G+KGD+G+ G G G PG KG + GP G++G DG
Sbjct: 361 GAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADG 475 HSP 7 Score: 56.9954 bits (136), Expect = 1.142e-7 Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKD------GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G+ G+KGD G G G G G KG KGE G+ GP+G +G G KGD G +G G +G D G+KG++G GP G G G KG+ G G +G GEK
Sbjct: 268 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEK 378 HSP 8 Score: 56.9954 bits (136), Expect = 1.309e-7 Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK---------DGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG +G +G G KGD G G G G G KG KGE G G +G +G G KGD G +G GP+G G+KG++G+ G G G PG KG +G G +G DG
Sbjct: 342 KGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADG 451 HSP 9 Score: 56.225 bits (134), Expect = 1.809e-7 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD------GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG +G +G+ GAKG G G G +GE G+ G KG+ G G +G G G KGD G +G G +G D G+KG++G GP G G G G++G G +G DG K
Sbjct: 321 KGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAK 429 HSP 10 Score: 56.225 bits (134), Expect = 1.856e-7 Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G+ G+KGD G G G G G KG KGE G+ GP+G +G G KGD G +G G +G DG G +G G G G G KG+ G G++G GEK
Sbjct: 427 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEK 531 HSP 11 Score: 56.225 bits (134), Expect = 2.277e-7 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD------HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDG---------NKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G+ G KGD GP G G G G KG KGE G G +G +G G KGD G +G GP+G G +KG++G +G PG G+ G KG G G +G+DG+
Sbjct: 445 GAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQ 560 HSP 12 Score: 55.8398 bits (133), Expect = 2.376e-7 Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK---------DGNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDGEK 2137
KG +G G+ G+KGD G G G +G G G KG+ G G +G +G G KGD G +G GP+G G+KGD+G+ G G G PG KG + GP G++G DG K
Sbjct: 246 KGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAK 363 HSP 13 Score: 55.8398 bits (133), Expect = 2.915e-7 Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD---GNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDG 2131
G++G +GS GAKG G G++G+ G KG KG G +G +G G G KGD G +G G +G D G+KGD+G+ G G G PG KG + GP G++G DG
Sbjct: 211 GSKGDKGSDGAKG---ADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADG 316 HSP 14 Score: 54.299 bits (129), Expect = 7.067e-7 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G +GS G KGD G G+ G+ G G KG KGE G G P+G +G G KG G G G +G DG KG +G+ G G G+ G KGS G G++G +G
Sbjct: 153 KGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANG 253 HSP 15 Score: 54.299 bits (129), Expect = 8.168e-7 Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD------GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG +G G+ GAKGD G G G +G G G KG+ G G +G +G G KGD G +G GP+G G KGD+G G G G G GS+G G++G DG K
Sbjct: 405 KGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPK 513 HSP 16 Score: 53.9138 bits (128), Expect = 1.168e-6 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGI------QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G +GS GAKGD G +G G++G+ G KG G G +G +G +G G G G +G+ G +G DG KGD+G+ G PG G+ G KG+ G G G G K
Sbjct: 235 GDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSK 342 HSP 17 Score: 53.1434 bits (126), Expect = 1.614e-6 Identity = 50/120 (41.67%), Postives = 61/120 (50.83%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD------HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGI------------QGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G+ GAKGD GP G G G G KG KGE G G +G +G G KGD G +G+ G +G DG KGD+G+ G PG G+ G KG+ G G G G K
Sbjct: 382 GAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSK 501 HSP 18 Score: 52.373 bits (124), Expect = 3.216e-6 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV---KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G G+ G KG+ G G G G G KG KG+ G+ GP+G +G G KGD G +G+ G G+ G+KG++G G PG G G G +G G++G+ GEK
Sbjct: 471 KGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQ-GEK 575 HSP 19 Score: 51.9878 bits (123), Expect = 4.598e-6 Identity = 45/105 (42.86%), Postives = 58/105 (55.24%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV---KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G++G +G GA G+ GP G G G G G KG+ G G +G +G G KGD G +GE +G DG KGD+G+ G PG G+ G KG+ G G G G K
Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGE---KGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSK 279 HSP 20 Score: 51.9878 bits (123), Expect = 4.638e-6 Identity = 44/103 (42.72%), Postives = 55/103 (53.40%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD------HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
GA+G G+ G KGD GP G G G G KG KG+ G G +G +G G KGD G +G GP+G G G +G+ G PG G+ G KG+ G G G
Sbjct: 286 GAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADG 388 HSP 21 Score: 51.9878 bits (123), Expect = 4.677e-6 Identity = 45/105 (42.86%), Postives = 54/105 (51.43%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSV---GPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G++G G G KG G G G G G KG KGE G G +G +G G KGD G G G G G KGD+G GP G G G G++G G++G DG K
Sbjct: 229 GSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAK 333
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]) HSP 1 Score: 98.9821 bits (245), Expect = 9.852e-21 Identity = 185/527 (35.10%), Postives = 233/527 (44.21%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLG------------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQG---PTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGD---IGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
+G PG +GP PG+ G DG +G+ G KG G +G+ G+PG +G +G +G+ G G GSKGD+G+ G G P GDKG G G G G KG +G G KG+ G G G+ GD G G G KG +G G GS+G G G+ G +G G PGS GD G +G KG G G +G G G+ G G G G G KGD G G GA G G G G GA GA+G PG KG KG+ G+ GP+G++G D G G+ G+ G +G +G G G PG KG+ G GL GP G G G+PG G G +G G G +G+ GE+G G PG G GQ G G G G G G G G+ G+PGQKG++ KG G PG G G KG+ G PG +G+ G PG KG+ G G
Sbjct: 111 KGDPGAQGP---PGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKG---------------------------------ADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGAD------------------GTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGD---------------------KGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDK----------------GQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQ---KGQDGQPGQKGQDGQPG 543 HSP 2 Score: 97.8265 bits (242), Expect = 2.112e-20 Identity = 153/406 (37.68%), Postives = 193/406 (47.54%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGS-----------KGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G KGS G G GEKG+ G G G KG +GE G G+ G G G+ G +G G PGS GD G +G KG G GS+G TG G +G G G + G KG KG+ G G GA G G G G GA GA+G PG KG KG+ G+ GP+G++G DG G G KG KG G G G+ G+ G +G +G G G PG+KG+ G GL GP G G G+PG G G +G G G G G +GD+G G+ G G +G +G G G +G G +G+PGQKG++ KG G PG G G +GE G G G +G+ G PG KG+ G G IG G+ G+
Sbjct: 154 GEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGD---------------------KGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSK------------------------GDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGD 514 HSP 3 Score: 83.1889 bits (204), Expect = 7.900e-16 Identity = 166/422 (39.34%), Postives = 204/422 (48.34%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGP---------TGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKG--------ELGPIGLPGPVGTXXXXXXXXXXXXXXX---XXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE 3673
+G PG +G G G+ G +G S G KGD G +G GNPGP+G +GA G G G GSKGD+G G +G TGDKGE+G G++G G G G +G G KG+ G G DG G G G G KG G G KG +G+ GL G +G +G G PG+ GD G G G +G G+ G G G G G G G+KG KG+ GL GP G PG G+ G G GA GA+G PG KG KGD G+ GP+G++G DG G G KG KG G+PG++G G G G G+ G G PG+KG E G G PG G G G+ G G G GQ GD G G G PG+ G G G G G+ G+
Sbjct: 156 KGSPGQKGDKGEKGEKGSNG---SPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTP------------------------------GSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQGEKGQDGQPGQKGQDGQPGQKGDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQKGQDGQPGQ 544 HSP 4 Score: 78.9518 bits (193), Expect = 1.779e-14 Identity = 142/414 (34.30%), Postives = 178/414 (43.00%), Query Frame = 2
Query: 2873 LGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRG------------EVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVK---GTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G KG G GP GEKG G G G KG++G E G KGS G+ G G +G +G +G PGS GD G G G G KGD G G GA G G G G GA GA+G PG K G KG+ G G +G++G +G G G KG KG G G G+ G+ G +G +G G G PG+KG+ G GL GP G G G+PG G G +G G G G G +GD+G PG G+ G++G +GP G +G DG G G KGE+ G KG+ GT G+ G KG+ G G G +G G PG KG+ G G IG G+ G+
Sbjct: 108 VGVKGDPGAQGPPGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNP---------------------------GPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGD---------------------KGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKG---------------------------DKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGD 446 HSP 5 Score: 75.0998 bits (183), Expect = 2.627e-13 Identity = 149/400 (37.25%), Postives = 191/400 (47.75%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI------KGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GV G G+ G+ G G G+KGD G G G VG+KG G G G +G G G PG+ G G G G G GEKG K G+PG+ G+ G G+ G++G+ G G KG KG G GP+G++G DG G G+ G KG +G G +G+ GN G +G G+ G +G G KG+ G G PG G G+ G DG G+ G PG G +G G G G G++GD+G G+ G G +G +G G G G +G G G G G+ G KG+ G G G PGQKG++ KG+ KG+ GT GA G KGE G G G G G+ G KG+ GL GP G G DG
Sbjct: 77 GVPGTNGKDGTPGDKGDTGDKGDKGDTGAPG-------VGVKGDPGAQGPPGEKGKDGDKGAPGA---------------------KGSKGDDGKKGDKGSSGEKGEK---------GSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGD---------------KGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADG 424 HSP 6 Score: 60.4622 bits (145), Expect = 1.003e-8 Identity = 50/112 (44.64%), Postives = 64/112 (57.14%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKD---GNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDG 2131
GA+G G+ G+KGD G G G G G KG KGE G+ GP+G +G G KGD G +G G +G D G+KGD+G+ G G G PG KG + GP G++G DG
Sbjct: 268 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADG 379 HSP 7 Score: 56.6102 bits (135), Expect = 1.378e-7 Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G+ G+KGD G G G G G KG KGE G+ GP+G +G G KGD G +G G +G DG G +G G G G G KG+ G G++G GEK
Sbjct: 331 GAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEK 435 HSP 8 Score: 56.225 bits (134), Expect = 1.707e-7 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD------HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDG---------NKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G+ G KGD GP G G G G KG KGE G G +G +G G KGD G +G GP+G G +KG++G +G PG G+ G KG G G +G+DG+
Sbjct: 349 GAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQ 464 HSP 9 Score: 55.8398 bits (133), Expect = 2.709e-7 Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD---GNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDG 2131
G++G +GS GAKG G G++G+ G KG KG G +G +G G G KGD G +G G +G D G+KGD+G+ G G G PG KG + GP G++G DG
Sbjct: 211 GSKGDKGSDGAKG---ADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADG 316 HSP 10 Score: 55.0694 bits (131), Expect = 4.119e-7 Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK---------DGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG +G G+ G+KGD G G G +G G G KG+ G G +G +G G KGD G +G GP+G G+KG++G+ G G G PG KG +G G +G DG
Sbjct: 246 KGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADG 355 HSP 11 Score: 54.6842 bits (130), Expect = 5.849e-7 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G +GS G KGD G G+ G+ G G KG KGE G G P+G +G G KG G G G +G DG KG +G+ G G G+ G KGS G G++G +G
Sbjct: 153 KGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANG 253 HSP 12 Score: 54.6842 bits (130), Expect = 6.210e-7 Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD------GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG +G G+ GAKGD G G G +G G G KG+ G G +G +G G KGD G +G GP+G G KGD+G G G G G GS+G G++G DG K
Sbjct: 309 KGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPK 417 HSP 13 Score: 53.9138 bits (128), Expect = 1.037e-6 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGI------QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G +GS GAKGD G +G G++G+ G KG G G +G +G +G G G G +G+ G +G DG KGD+G+ G PG G+ G KG+ G G G G K
Sbjct: 235 GDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSK 342 HSP 14 Score: 52.7582 bits (125), Expect = 2.277e-6 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV---KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G G+ G KG+ G G G G G KG KG+ G+ GP+G +G G KGD G +G+ G G+ G+KG++G G PG G G G +G G++G+ GEK
Sbjct: 375 KGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDKGQ-GEK 479 HSP 15 Score: 52.373 bits (124), Expect = 3.178e-6 Identity = 48/111 (43.24%), Postives = 56/111 (50.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD------HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSV---GPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G+ G KGD GP G G G G KG KGE G G +G +G G KGD G G G G G KGD+G GP G G G G++G G +G DG K
Sbjct: 286 GAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAK 396 HSP 16 Score: 51.9878 bits (123), Expect = 3.868e-6 Identity = 45/105 (42.86%), Postives = 58/105 (55.24%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV---KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G++G +G GA G+ GP G G G G G KG+ G G +G +G G KGD G +GE +G DG KGD+G+ G PG G+ G KG+ G G G G K
Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGE---KGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSK 279 HSP 17 Score: 51.2174 bits (121), Expect = 6.459e-6 Identity = 45/105 (42.86%), Postives = 53/105 (50.48%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSV---GPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G++G G G KG G G G G G KG KGE G G +G +G G KGD G G G G G KGD+G GP G G G G++G G +G DG K
Sbjct: 229 GSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAK 333 HSP 18 Score: 50.8322 bits (120), Expect = 8.937e-6 Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV------KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG+ G +G G KG+ G +G G++G+ G KG KG+ G G +G +G G KGD G G G G G+KGD G G G G G KG+ G G++G GEK
Sbjct: 156 KGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEK 264
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Match: emb-9 (Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]) HSP 1 Score: 68.9366 bits (167), Expect = 3.424e-11 Identity = 179/557 (32.14%), Postives = 219/557 (39.32%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGK--EGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGK---------TGLMGSRGPQGVSGEPGSPGDAG----VNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV--------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELG-----IQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQG-------PAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGI--VXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY---LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG G +G PG+PG+ G EG + +G G +G+SG G+ G G SG G G+KGD G +G G G G +G G + P + G G G+ G KG GP+GP G G GP G GLKG +G++G G GK G GS+G QG+ G PG PG G + G G G +G GV+G GL G G PG +G GP GA GA GQPG+ KG +G+ G G GE GL G G G GE G IQGPPG G+ G G PG G G PG G+ G G P G GT GE G G G PG+ G G RG G +G + D + G G+VG PG G+ L G G PG G G+ G PG G+ G G G PG +GE+GL+G G G DG
Sbjct: 139 GPPGQSGQNGNPGRPGLSGPPGEGGVNSQGRKGVKGESGR---SGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGVRTSGVKGEKGLPGPPGPPGQPGSYPWASKPIEMEVLQGPVGPAGVKGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGP---VGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGL------------------------PGEPGDCGYPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIG------------------------DPGYSGEKGFPGTGVNKVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGLDGYPGAPGAPGAPGETGFGFPGQVGYPGPNGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDG 641 HSP 2 Score: 63.1586 bits (152), Expect = 2.321e-9 Identity = 180/559 (32.20%), Postives = 217/559 (38.82%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE-KGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA-----------------GPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPP--------------GIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGK---------------RGNPGPKGETGLMGPIGPVGEDG 4039
+GP G G G G++G +GP G LG G P G G +GQ G G+ G +G RGK G G G+KG + G++G G G PG +G GE G G G +G GP GP GE G+ GP G G G +G G+ G +G G +G RGP G G PG PG G+ EKG +G+ G G G PG GE GPPG G SG +G PG+ G GD G G +G G GV ++G G PG GE G GLPG G G PG G QG G +G G+ GE G G P G G +G GPNG G G GP G PG G G G PG G G DG G+PG +GE L GI G G G G++G+ G PG +G G +G PG G+ G GP G GEDG
Sbjct: 257 QGPVGPAGVKGEKGRDGPVGPPGMLGLDG------PPGYPGLKGQKGDLGDAGQRGKRGKDGVPGNYGEKGSQ------------------------GEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGM----------------------------PGYTEKGDRGEDGYPGFAGEPGLPGEPGDCGYPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGT-------------------------------GVN-KVGPDGYPGTPGERGMDGLPGFPGLH---------------------------GEPGMRGQQGEVGFNGIDGDCGEPGLDGYPGAPGAPGAPGETGFGFPGQVGYPGPNGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDG 698 HSP 3 Score: 61.6178 bits (148), Expect = 6.330e-9 Identity = 201/543 (37.02%), Postives = 235/543 (43.28%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGI------------------DGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGP-TGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGL--------KGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGD-IGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDT---GILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGP---PGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGER---------GDRGPPGIAGNMGQRGPN---GPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN 3979
GPPG G G PG PG+ DG G+ G KG G +G G PG G +G G+ G G G +GD G GP G TG+ G G G G +G +GL G G GP+GP G G G G+ G+ KG RGE G G G+ GL G G G GE G PG +G G G G G G+ G G PG GEKG G + +GP G PG GE G G G G G+PG++G +G+ GI G GE GLD G G G G GP G G G+ GP PGR G G G PG G +G G G PG G SG G DG G G PG G G G SG G G+ GD+G PG G G GP+ G G+VG G RG+ G G G G G +GSRGLDG G PG+ G L G+ G+ G G VG GEPG PG G G+ GN
Sbjct: 276 GPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQGFDGV------------------------------------QGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGEPGDCGYPGEDGLPG----YDIQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGLD-GYPGAPGAPGAPGETGFGFPGQVGYPGPNGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQPGEPGN 777 HSP 4 Score: 59.6918 bits (143), Expect = 2.358e-8 Identity = 168/537 (31.28%), Postives = 201/537 (37.43%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGS---IGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKG---SEGKTGLMGSRGPQGVSGEPGSPGDAG------VNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGP-------AGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVG--EPGQKGERYLKGIKGSPGTIGAVGSKGEP-----------GPPGLTGPQGKRGNPGPKGETG 4003
G PG GP G PG PG+ G EG +G KG G RG G+PG G++G G G GE G G G G G G G G+ G G GR G GP G +G V G+ G+KG G G+ G + G GL G++G G G PG PG +G V + K P P P P + ++G +G G G GR G GPPG G G G PG+KG KGD G G RG++G D G GN G +G +GE G+ G PG G G G PG G PG G G +GP AG G QG G +G +G PG G G GP GP+G G G G+DG G E G +GE G G PG G G G P GPPGL G G+ G PG G+ G
Sbjct: 61 GAPGQDGPEGAPGAPGMFGAEGDFGDMGSKGARGDRGLPGSPGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGMPGLAGP------------------------------------------PGQSGQNGNPGRPGLSGPPG----EGGVNSQGRKGVKGESGRSGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGVRTSGVKGEKGLPGPPGPPGQPGSYPWASKPIEMEVLQGPVGPAGVKGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKD---------------------GVPGNYGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGR---------------------------PGFEGDCGPEGPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAP---------------------GAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGEPGDCGYPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIG 482 HSP 5 Score: 56.9954 bits (136), Expect = 1.585e-7 Identity = 127/401 (31.67%), Postives = 157/401 (39.15%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGL---PGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAG------LQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGE 4033
G KG G G GE G G G+ G +G G G+ G+EG G MGS+G +G G PGSPG G+ +G+ G GL G G PG G G PG G +G GQ G G G G+ GP GE G++ SG G+ G G G G KG+ GP GL PG G G G + P P + LQGP G +G +GE G G GPPG+ +G GP G G+ +G G +G+ GQ+G+R G G PG G GS+GE PG PG G G+ G PG G G GP GP+GE
Sbjct: 43 GTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDMGSKGARGDRGLPGSPGHPGL---------------------------------QGLDGLPGLKGEEGIPGCNGTDGFPGMPGLAGPPGQSGQNGNPGRPGLSGPPGEGGVNSQGRKGVKGESG-------------RSGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGVRTSGVKGEKGLPGPPGPPGQPGSYPWASKPIEMEVLQGPVGPAGVKGEKGRDGPVGPPGM---LGLDGPPGYPGL---------------------------KGQKGDLGDAGQRGKR---GKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGE 364 HSP 6 Score: 55.8398 bits (133), Expect = 3.972e-7 Identity = 189/530 (35.66%), Postives = 218/530 (41.13%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGD-IGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTG---ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGP---PGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMG------QRGPNGPIGI------VXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN------PG------PK 3991
PGT+G +G PG PG G EG GP+G LG +G GP G +G G G G G G G GP+GP G G EKG RG G G G G GE GD G G+ GL G I+G G G G G G+ G+ G PG +G EKG G + +GP G PG GE G G G G G+PG++G +G+ G I G GE GLDG G G+ G G G GP G G G+ GP PGR G G G PG G +G G G PG G SG G DG G G PG G G G SG G G+ G G PG G+ G Q G GP GI VG G RG+ G G G G G +GSRGLDG G PG+ G L G+ G+ G G VG GEPG PG G G+ GN PG P
Sbjct: 335 PGTKGGAGEPGYPGRPGFEGDCGPEGPLGEG--TGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAPGA-------------------------------PGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGEPGDCGYPGEDGLPGYD----IQGPPGLDGQSGRDGFPGIPGDIGDPGYSG---------------------------------EKGFPGTGVNKVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGLDGYPGAPGAPGAPGETGFGFPGQVG-YPGPNGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQPGEPGNLAYPGQPGDVGYPGPD 793 HSP 7 Score: 55.8398 bits (133), Expect = 3.972e-7 Identity = 159/406 (39.16%), Postives = 185/406 (45.57%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLI------------GPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G G+ G+ G+ G G GE G VG GK G GT G G G G +G G+ G G+ G PG+PGD G G G+ G G G G G+ G PG +G GD GL G G PG GE G G G GA+GQPG G G+ G G RG+ G G L G G G G G G G G G+ GE G G G G G PG G G G G PG PG +G G G G PGLPG+ G G G G +GE GE G G PG G GQ+G G G G G G P GL G+ G+PG KGE L G G PG+ G +G+ G+ G PG G G GN G G+ GL G G G+ G
Sbjct: 608 GEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGL------RGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGPPGLPGQDGLPGLNGERGDNGD-SYPGNPGLSGQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPGENGLP------------------GLRGQDGQPGLKGENGLDGQPGYPGSAGQLGTPGDVGYPGAPGENGDNGNQGRDGQPGLRGESGQPGQPG 988 HSP 8 Score: 53.1434 bits (126), Expect = 2.180e-6 Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G+ G G G G GQ G G+ G +G KG GI G G G+ G G G++GE G G+ G G G +G PG G PG G G GNQGRDG+
Sbjct: 874 GQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPGENGLPGLRGQDGQPGLKGENGLDGQPGYPGSAGQLGTPGDVGYPGAPGENGDNGNQGRDGQ 974
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Match: dpy-17 (DumPY: shorter than wild-type [Source:UniProtKB/TrEMBL;Acc:Q20778]) HSP 1 Score: 62.003 bits (149), Expect = 1.739e-9 Identity = 69/201 (34.33%), Postives = 85/201 (42.29%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGS-------------IGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPG 3049
+G PG GP G+PG PG+DG++ P G GP G G PG +G+RGARGQ+ G GS G G GP GP G GE G G G GL G KG+ G G G++G+ G G TG+ G GE G +G +G G G+ G G GEPG
Sbjct: 161 KGTPGHDGPDGIPGVPGVDGEDADDAKAQTQQYDGCFTCPAGPQGPPGSQGKPGARGMRGARGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEHQI----------------------------------GLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDDGPNGAAGSPGEEGEPG 327 HSP 2 Score: 51.2174 bits (121), Expect = 4.357e-6 Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPE-----GIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G RG RG + G G G G+ G +G G GE G G G + G+ G KG G GE+G +G+ G++G G GPPG G G KG GP G G GE+
Sbjct: 216 RGMRGARGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEHQIGLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDDGPNGAAGSPGEE 323
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Match: let-2 (Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]) HSP 1 Score: 61.2326 bits (147), Expect = 7.581e-9 Identity = 158/420 (37.62%), Postives = 194/420 (46.19%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVK------------GTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSP-----------GLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
++G GL G KG GP DG+KGD G G+ GL+G +G G+ G G G G G G G+PG G G+ G+ G QG GS G G G G+ G+ G G+ G+ G GL G G G +G++G PG +GA G +GQPGV G GD G+ G G++G +G G G GL G +G G G G G G G+ G+ G PG KG+ G G PG G G SG+ G G PG GQ G G PG G +G +G SG G G +G+ G PG G G G NG G RG DG G PG+ G+ + G+KG G G G G PG PGL G G G PG KGE G G G G GE
Sbjct: 1013 DRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPG-YGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPG---------------------------KRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGE 1404
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079003) HSP 1 Score: 86.6557 bits (213), Expect = 2.096e-16 Identity = 206/554 (37.18%), Postives = 246/554 (44.40%), Query Frame = 2
Query: 2495 PGTRGPSGLPG---KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGS---------KGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR--------IGEAGPPGK---TGASGAEGQPGVKGTKGD---TGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLP-------GKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGE-----RYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG RG +GLPG +PGI G++G +GP +GP G +G PG GI G RG+ G GE GS KGDRG G GP KG G+ G G GP G G G G G TGL G G VG +G G GLMG +G QG++G PG G G+ GEKG QG G GP G G GQ G G G++GD G G G PG G AGPPG+ G SG +G+ G+ G KG+ G+ G GE+G G G G+ G+ G G G G+ G G +G +GE G+ G PG KGE GP+GL G G G G+ G G PGLP G G QG G +G +GE GERG GP G+AG G RG GP G G G+ G G+ G +GE +KG KG PG G G +G G PGL G +G G G G GL GPIGP G GE
Sbjct: 889 PGDRGDAGLPGVSGRPGIVGEKGDVGP---IGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGP---------------------------------------------------KGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGA---------------PGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGL------------------------NGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGE 1349 HSP 2 Score: 84.7297 bits (208), Expect = 7.676e-16 Identity = 181/541 (33.46%), Postives = 222/541 (41.04%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGP---KGDLGPRGQSGNPGPQGIRG--ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP---------------------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSP-------GDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPG---QKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM 4009
PG GP GLPG G++G GP +GD GP G G PG +G+ G G++GP GE G +G G G G G+KGE+G +GV G G KGSVG +G G++GD G G +GL G +GE G G +G TG G +G +G+ G+PG P GD G GE+G G EKG +G+ GL GP G G G+ G G GASG G PG KG +GPRGE G G ++GE G+ G PGR G G IG PG +G GLPG AG G G G G AG +G+RG G G GQ G G G+ G GP+G G G G G G KG RGL G G PG QKG+ G+ G+ G +GA G +G GP G G G G PG KGE G++
Sbjct: 1048 PGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGL------------------------------------------QGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTG------------------------EKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGD------IGPRGEIGYPGVT----------------------------IKGEKGLPGRPGRNGRQGLIGAPGLIGER---------------------------GLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML 1461 HSP 3 Score: 84.3445 bits (207), Expect = 1.122e-15 Identity = 178/518 (34.36%), Postives = 218/518 (42.08%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSG-PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT--RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
PG RG G PG G+ G +G GP +G +G +G PGP+G RG RGQ G P +GD+G G +G TG+KGE+G+ G GP G AG KG RGL G G+ G G G KGD+GP G+ G G +GE G+ G G+ G G G G+ GE G PG AG E G+ G G IGP G+ G G AG PG+ G G G PG+KG DTG G +GE+GL+ G EG+ G +G +G GP GLPG VG G + G PG G GP G G +G G +G G G G GQ+G G + P G G G G +G GEPG+ GER L GI+G G G G GE G G GP+G RG PG +G G +G IG GE G
Sbjct: 1170 PGDRGDKGEPGLSGLPGLKGETGP---VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGA------------------------------KGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAG---------------------------------EPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKG---DTGPQGFKGERGLN------------------------------GFEGQKGDKG---DRGLQGPSGLPGLVGQKGDT------------------------GYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML------------------PPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPG 1543 HSP 4 Score: 83.5741 bits (205), Expect = 1.558e-15 Identity = 185/539 (34.32%), Postives = 233/539 (43.23%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRG------PQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGA---SGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT------------IGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G PG G G PG+ G G+ G G KG+ GP+G G GP+G+ G RG+ G G +G G+ GK G +G G G+ G GP+G G+ GL G KG GP GP G G G G G RG+ G+ G G+ G++G +G P GV+G PG PG GV G G KG+ G G G PG G+ G PG G +G G PG +G G G+ G +G++G G G G G +G G PG G G+ G G G+ G+ G PG KG G GL GP G G + + G G PG SG GD GP G+PG PG+ GL G A G G GE+GD+G GI G G G G +GL G G+PG+KG GI G+PG +G G +G+ G PGL+G G +G GP G G G GP GE G
Sbjct: 764 KGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQ----------------------------PGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADG---SVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRG------------------------------RDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAV-HGRAGPPGEKGDQGRSGIDGRDGINGEKG------------------------------EQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERG 1210 HSP 5 Score: 80.1073 bits (196), Expect = 1.920e-14 Identity = 192/555 (34.59%), Postives = 234/555 (42.16%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQS--GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKG---TKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKG---ELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERG-----DRGPPGI---AGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G++G +G+PG PG+ G +G G KG+ G G S G PG G GA GQ G G G+ G +G G +G G K + GP G+KG GL G G G GP GE+G G G G+ G G G KG +G+TGL G+ G +G G PG+PG GV G KG +G G GP G E G KG+ GL G G PGR G G PG G S +G+PG G KGD G G GE+G + G +G G+ G+ GPPG G E G GL G G GP G +G G G G+ G+ G VG PG PGK GL+G G +G G GE G GPPG+ G G RGP GPIG G DG VG PG +G+ L G+ G PG +G +G G GPPG+ G G RG G KGE G G +G G G+
Sbjct: 496 GSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGK------------------------------------CSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKG---------------EFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQS-IKGEPGFHGRDGAKGDKGSFGRSGEKG--------------EPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFP---------------------------GADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGD 957 HSP 6 Score: 72.7886 bits (177), Expect = 3.420e-12 Identity = 200/562 (35.59%), Postives = 238/562 (42.35%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI------------------------------RGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXX--XSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL---------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
PG +GP+G PG PGI+GK+G G G G G SG PGP+G RG G +GP G G KG+RG GP G G +GE G G +G + GP+G +G+KG GL+GRKG GP G G G G G G G RG G G G TG G RG G++G PG+PG G G G GK G GP GP G P G G +G+ G GL GP G G+ G AG PG+ G EG PG KG KG G+ GP+G G G QG +G+ GI G PG KG G G G G G S P G+PG G G++G GG + AG +GD+G G+ G G+ G GP G G G RG G G GP G G G GL G GEPG+ L KG G+PG G G KG G PG+ GP+G+ G KGE GL G
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGN---EGPPGKKGEKGTAGLNGPKGS-------IGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGF---KGEKGLSG 696 HSP 7 Score: 68.1662 bits (165), Expect = 7.221e-11 Identity = 213/590 (36.10%), Postives = 260/590 (44.07%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---------GDVGPLGKTGLKGTRGEVGIKGS-----------------------------------EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGI---LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKA-----GLQGPAGGSGTQGEAGERGDRGPPGIA-------------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM--GPIGPVGEDG 4039
G RG G G+PG+ G++G GP+GD G GQ G PG G RG +G GP G G KGDRG+ G G G+ G++G+PG G G G GP G G G P G +GL G G GP G +G+K G+ GP GK G KGT G G KGS G GL GS+G +G G G+PGD+ + G G+ G G G G PG PG +G+ G+KGD+G GP G G G G PGK GA G G+ G G +G GI GP GE+G DG G G+ G G G +G G G +G G KG G G+PGP G G G+ G G PG G G G G PG+PG++ G G G G +G G G++G PG G GQ G GP G G G G G +G G G PG +G R L G +G G GAVG G PG GL G G+ G PGP+GE G+ GP+GP G +G
Sbjct: 295 GPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGA--PGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLG----RPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPG---------------EDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863 HSP 8 Score: 67.781 bits (164), Expect = 9.697e-11 Identity = 214/550 (38.91%), Postives = 258/550 (46.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGK---PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKT--GLMGSRGPQGVSGEPGSPGDA----GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNS-------GPQGVEGELGIQGPPGRKGELGPIGLP------GPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG GP+GL G+ PG++G G G KGD GP GQ G+ G +G G GQ+G G G G+ G G G G G+ G PG +G G GP G G GS G+KG +G GE G RG G G G G GE+GD GP G KG RGE G+KG +G + G M G G+ GE G P + + G +G G +G G VG +G PG G G G KG+ GL G G GR G GPPG TG G G+PG+ G G+ G G G G G G +G G GG GPQG+ G G+ GP G G+ G GLP GP G G G G GP G G G GP G G G AGL G G QG G+ G G PG+ G+ G+RG G G +G G G G G +G G+ G PGQKG+ +KG G + G KG+ PG G GP G+RG PG +G G+ G GP GE GE
Sbjct: 91 RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPY---GAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLP----GYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGA-------PGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGE 625 HSP 9 Score: 67.781 bits (164), Expect = 1.138e-10 Identity = 205/578 (35.47%), Postives = 244/578 (42.21%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---------------------QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL----------------GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV--------------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGL-----MGPIGPVGEDGE 4042
RGPPG RG PG+ G DG G GP G+ G G++G PG +G GA G G G G++G G GP+G G KGE+G G+ G G G G G G PG E G G G KG G G GEKG+ G G+TG+ G GE G G G TGL G+ GP G PG G G+N G +G KG+ G +G G PG+ G G PG+ G G G+PG+ +G KGD G GP G G D G G G G++G GV G GI G G G +GP G+ GP G G G G G G G G G G+ G G G GP G +G G G+RG G PG++G G +G G G GP G RG PG G MG G+ G G+ G G G PG+KG + G+ G PG G G KGEPGP GL G G G PG GE GL G GP GE G+
Sbjct: 596 RGPPGERG---YPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKG-------------EPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGP---QGPPGVEGPRGLN------------------------------GPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGAD---------------GSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGD 1109 HSP 10 Score: 59.3066 bits (142), Expect = 4.244e-8 Identity = 103/287 (35.89%), Postives = 128/287 (44.60%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP 3322
G RG GL G+PG+ G G IGP G G RG +G+PG G GA G G TG G KG+RG G +G GDKG+RG G G PG G +KG G G G+ GP+G GE+G GP G+ G GT G+ G +G+ G++ GP G GEPG PG+ G+ G +GE+G KG+ GLIG TG GR G G G+ G G EG G+ G KG+ G P
Sbjct: 1321 GERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVG------------------------------QKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGT---PGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGL---------------------------IGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPGAPAP 1547 HSP 11 Score: 56.9954 bits (136), Expect = 2.085e-7 Identity = 202/546 (37.00%), Postives = 247/546 (45.24%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRG--------LLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEG---KTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA---------GPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE---AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP--------GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G GP GL G G+ G +G G KG G G+ GN GP G +G +G +G G GS G G GP GP G KG+ + G G KG G+ G PG +G GE+G +G LGR G+ G G G+KGD G+ G G +G++GIKG G + G +G +G SG PG PG G G G +G G G GI GQ GP GEKG G GL G TG PG+ G G GA GA+G G KG +G GI GP+GE G G G G+ G G G+ GR G G G Q ++GE G G G KG+ G G G G G D P G+ G PG+ G+ GP G G+ GE G +G+ GP G G G RG NGP G +G G VG PG G+ L+GI PG G G +GEP GPPGL G QG++G+ GP G G G G VG G+
Sbjct: 413 GAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGD----------------AGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDA---GRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGAR------GPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG-QSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNK-----------GEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRG---------------------------EKGNQGAVGVPGNPGKDGLRGI---PGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGD 891 HSP 12 Score: 55.8398 bits (133), Expect = 4.374e-7 Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPS--GQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG--IKGSRGPVGNQGRDGEK 2137
KG RGIRG G P G G++GE G G KGE G +G GP G+AG KGD G+QG G G +G G +G +GP G G PG IKG +G G GR+G +
Sbjct: 1206 KGERGIRGQPGLPATV-PDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQ 1311 HSP 13 Score: 55.0694 bits (131), Expect = 8.726e-7 Identity = 119/377 (31.56%), Postives = 149/377 (39.52%), Query Frame = 2
Query: 2900 IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGS-------GTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGET 4000
I G +G GPLG TGLKG G G++G G G G GP G G+ G G G++ G G G+ GP G PG PG G G +GQ G+ G +G +G+ GPRG G G G G + G G +G G G G+ G G G G +G+ GP G GP G G G+ GA PG PG G +G S G G+ G +G PG+ G G+ GP G GLDG+ GE PG G+R +G G PG+ G G +GEPG GL G G++G PG G T
Sbjct: 85 IAEKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLH---------------------------------GQAGVPGVQGPAGNPGA------PGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPM-----------KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEG------------------------------DTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGAT 381 HSP 14 Score: 54.6842 bits (130), Expect = 1.007e-6 Identity = 114/287 (39.72%), Postives = 132/287 (45.99%), Query Frame = 2
Query: 3167 EKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG--IVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSP---GTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
EKG +G G +GPTG G +G G G +G G +G PG G +GD G RG GL G G PG QG GN G G+ G+ G G G G G G+PGP G +G G G G P G G PG G AGL GP G GE GERGD GP G G G+ G G G GP P P + K + + G G+ GQKGE L G KG P G G G KGE G PG G +G++GN GP G TG G
Sbjct: 87 EKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGE---RGSPGLH------------GQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP---QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKG 355 HSP 15 Score: 54.6842 bits (130), Expect = 1.105e-6 Identity = 51/115 (44.35%), Postives = 60/115 (52.17%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG------------TRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G G+ G G KGD GP+G +G RG+ G+ GV G GI G +G P G AGV G G+ G G RG+DG KG+ GS PG G PG KG RG GN G G
Sbjct: 857 GPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGS---PGLVGMPGNKGDRGAPGNDGPKG 968 HSP 16 Score: 54.299 bits (129), Expect = 1.398e-6 Identity = 190/519 (36.61%), Postives = 228/519 (43.93%), Query Frame = 2
Query: 2495 PGTRGPSGLPG------KPGIDGKEGSIGPKGDLG---------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGK---FGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG--------IKGS---EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEG---ELGIQGPPGRKGELGP-----IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPG 3940
PGT G +G PG +PG G++G +G KGD+G P+G G G GI G G GP GE G G+RG G GP G+KGE G G G G G ++ KG KG G PG +G G KG GL G G G G GEKG G G G G G G IKG G+ G G +G G SGE G PG ++ K KG G G+ GP G G GE G G G +G +G PGV+G +G + GPRGE+G N G GV G + G++G PGR G+ GP I PGP+G G +G G G G +G G G GS G PG G G G SG G GE+GD GP G AG G G G G+ G DG +G+PG G +G GN G +G+ G DG G G G +G G PG GA G KG G
Sbjct: 533 PGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKG-----------------------NKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRG---LNGPRGEKG---------------------------NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998 HSP 17 Score: 53.5286 bits (127), Expect = 2.112e-6 Identity = 103/295 (34.92%), Postives = 126/295 (42.71%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKP-------GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLD 3343
GP G RG G PG P G G +G G G+ G +G+ G GP G+ GA+G G G G+ G G G +G G +GE GEKG+ G GR G G IG GE+G G G+ GL G G +G GS+G+ GL GS G G G PG+PG G GP G +G G G G+KG KGD GL GP+G PG +G+ G TG G G G G G+ G GP+G G D
Sbjct: 1204 GPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGE----------------------------------IGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDT---------------GPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQK---GDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRD 1446 HSP 18 Score: 53.5286 bits (127), Expect = 2.607e-6 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG-----TRGEVGM---------KGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G+ G GAKGD GP G++G +GE G+ +G+ G G+ G RG G+AG G +G+ G GP G G +G GS G PG G PG G +G G QG GE+
Sbjct: 1268 GASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGER 1383
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079002) HSP 1 Score: 86.6557 bits (213), Expect = 2.096e-16 Identity = 206/554 (37.18%), Postives = 246/554 (44.40%), Query Frame = 2
Query: 2495 PGTRGPSGLPG---KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGS---------KGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR--------IGEAGPPGK---TGASGAEGQPGVKGTKGD---TGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLP-------GKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGE-----RYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG RG +GLPG +PGI G++G +GP +GP G +G PG GI G RG+ G GE GS KGDRG G GP KG G+ G G GP G G G G G TGL G G VG +G G GLMG +G QG++G PG G G+ GEKG QG G GP G G GQ G G G++GD G G G PG G AGPPG+ G SG +G+ G+ G KG+ G+ G GE+G G G G+ G+ G G G G+ G G +G +GE G+ G PG KGE GP+GL G G G G+ G G PGLP G G QG G +G +GE GERG GP G+AG G RG GP G G G+ G G+ G +GE +KG KG PG G G +G G PGL G +G G G G GL GPIGP G GE
Sbjct: 889 PGDRGDAGLPGVSGRPGIVGEKGDVGP---IGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGP---------------------------------------------------KGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGA---------------PGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGL------------------------NGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGE 1349 HSP 2 Score: 84.7297 bits (208), Expect = 7.676e-16 Identity = 181/541 (33.46%), Postives = 222/541 (41.04%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGP---KGDLGPRGQSGNPGPQGIRG--ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP---------------------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSP-------GDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPG---QKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM 4009
PG GP GLPG G++G GP +GD GP G G PG +G+ G G++GP GE G +G G G G G+KGE+G +GV G G KGSVG +G G++GD G G +GL G +GE G G +G TG G +G +G+ G+PG P GD G GE+G G EKG +G+ GL GP G G G+ G G GASG G PG KG +GPRGE G G ++GE G+ G PGR G G IG PG +G GLPG AG G G G G AG +G+RG G G GQ G G G+ G GP+G G G G G G KG RGL G G PG QKG+ G+ G+ G +GA G +G GP G G G G PG KGE G++
Sbjct: 1048 PGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGL------------------------------------------QGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTG------------------------EKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGD------IGPRGEIGYPGVT----------------------------IKGEKGLPGRPGRNGRQGLIGAPGLIGER---------------------------GLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML 1461 HSP 3 Score: 84.3445 bits (207), Expect = 1.122e-15 Identity = 178/518 (34.36%), Postives = 218/518 (42.08%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSG-PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT--RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
PG RG G PG G+ G +G GP +G +G +G PGP+G RG RGQ G P +GD+G G +G TG+KGE+G+ G GP G AG KG RGL G G+ G G G KGD+GP G+ G G +GE G+ G G+ G G G G+ GE G PG AG E G+ G G IGP G+ G G AG PG+ G G G PG+KG DTG G +GE+GL+ G EG+ G +G +G GP GLPG VG G + G PG G GP G G +G G +G G G G GQ+G G + P G G G G +G GEPG+ GER L GI+G G G G GE G G GP+G RG PG +G G +G IG GE G
Sbjct: 1170 PGDRGDKGEPGLSGLPGLKGETGP---VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGA------------------------------KGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAG---------------------------------EPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKG---DTGPQGFKGERGLN------------------------------GFEGQKGDKG---DRGLQGPSGLPGLVGQKGDT------------------------GYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML------------------PPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPG 1543 HSP 4 Score: 83.5741 bits (205), Expect = 1.558e-15 Identity = 185/539 (34.32%), Postives = 233/539 (43.23%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRG------PQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGA---SGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT------------IGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G PG G G PG+ G G+ G G KG+ GP+G G GP+G+ G RG+ G G +G G+ GK G +G G G+ G GP+G G+ GL G KG GP GP G G G G G RG+ G+ G G+ G++G +G P GV+G PG PG GV G G KG+ G G G PG G+ G PG G +G G PG +G G G+ G +G++G G G G G +G G PG G G+ G G G+ G+ G PG KG G GL GP G G + + G G PG SG GD GP G+PG PG+ GL G A G G GE+GD+G GI G G G G +GL G G+PG+KG GI G+PG +G G +G+ G PGL+G G +G GP G G G GP GE G
Sbjct: 764 KGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQ----------------------------PGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADG---SVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRG------------------------------RDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAV-HGRAGPPGEKGDQGRSGIDGRDGINGEKG------------------------------EQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERG 1210 HSP 5 Score: 80.1073 bits (196), Expect = 1.920e-14 Identity = 192/555 (34.59%), Postives = 234/555 (42.16%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQS--GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKG---TKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKG---ELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERG-----DRGPPGI---AGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G++G +G+PG PG+ G +G G KG+ G G S G PG G GA GQ G G G+ G +G G +G G K + GP G+KG GL G G G GP GE+G G G G+ G G G KG +G+TGL G+ G +G G PG+PG GV G KG +G G GP G E G KG+ GL G G PGR G G PG G S +G+PG G KGD G G GE+G + G +G G+ G+ GPPG G E G GL G G GP G +G G G G+ G+ G VG PG PGK GL+G G +G G GE G GPPG+ G G RGP GPIG G DG VG PG +G+ L G+ G PG +G +G G GPPG+ G G RG G KGE G G +G G G+
Sbjct: 496 GSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGK------------------------------------CSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKG---------------EFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQS-IKGEPGFHGRDGAKGDKGSFGRSGEKG--------------EPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFP---------------------------GADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGD 957 HSP 6 Score: 72.7886 bits (177), Expect = 3.420e-12 Identity = 200/562 (35.59%), Postives = 238/562 (42.35%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI------------------------------RGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXX--XSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL---------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
PG +GP+G PG PGI+GK+G G G G G SG PGP+G RG G +GP G G KG+RG GP G G +GE G G +G + GP+G +G+KG GL+GRKG GP G G G G G G G RG G G G TG G RG G++G PG+PG G G G GK G GP GP G P G G +G+ G GL GP G G+ G AG PG+ G EG PG KG KG G+ GP+G G G QG +G+ GI G PG KG G G G G G S P G+PG G G++G GG + AG +GD+G G+ G G+ G GP G G G RG G G GP G G G GL G GEPG+ L KG G+PG G G KG G PG+ GP+G+ G KGE GL G
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGN---EGPPGKKGEKGTAGLNGPKGS-------IGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGF---KGEKGLSG 696 HSP 7 Score: 68.1662 bits (165), Expect = 7.221e-11 Identity = 213/590 (36.10%), Postives = 260/590 (44.07%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---------GDVGPLGKTGLKGTRGEVGIKGS-----------------------------------EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGI---LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKA-----GLQGPAGGSGTQGEAGERGDRGPPGIA-------------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM--GPIGPVGEDG 4039
G RG G G+PG+ G++G GP+GD G GQ G PG G RG +G GP G G KGDRG+ G G G+ G++G+PG G G G GP G G G P G +GL G G GP G +G+K G+ GP GK G KGT G G KGS G GL GS+G +G G G+PGD+ + G G+ G G G G PG PG +G+ G+KGD+G GP G G G G PGK GA G G+ G G +G GI GP GE+G DG G G+ G G G +G G G +G G KG G G+PGP G G G+ G G PG G G G G PG+PG++ G G G G +G G G++G PG G GQ G GP G G G G G +G G G PG +G R L G +G G GAVG G PG GL G G+ G PGP+GE G+ GP+GP G +G
Sbjct: 295 GPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGA--PGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLG----RPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPG---------------EDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863 HSP 8 Score: 67.781 bits (164), Expect = 9.697e-11 Identity = 214/550 (38.91%), Postives = 258/550 (46.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGK---PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKT--GLMGSRGPQGVSGEPGSPGDA----GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNS-------GPQGVEGELGIQGPPGRKGELGPIGLP------GPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG GP+GL G+ PG++G G G KGD GP GQ G+ G +G G GQ+G G G G+ G G G G G+ G PG +G G GP G G GS G+KG +G GE G RG G G G G GE+GD GP G KG RGE G+KG +G + G M G G+ GE G P + + G +G G +G G VG +G PG G G G KG+ GL G G GR G GPPG TG G G+PG+ G G+ G G G G G G +G G GG GPQG+ G G+ GP G G+ G GLP GP G G G G GP G G G GP G G G AGL G G QG G+ G G PG+ G+ G+RG G G +G G G G G +G G+ G PGQKG+ +KG G + G KG+ PG G GP G+RG PG +G G+ G GP GE GE
Sbjct: 91 RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPY---GAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLP----GYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGA-------PGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGE 625 HSP 9 Score: 67.781 bits (164), Expect = 1.138e-10 Identity = 205/578 (35.47%), Postives = 244/578 (42.21%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---------------------QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL----------------GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV--------------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGL-----MGPIGPVGEDGE 4042
RGPPG RG PG+ G DG G GP G+ G G++G PG +G GA G G G G++G G GP+G G KGE+G G+ G G G G G G PG E G G G KG G G GEKG+ G G+TG+ G GE G G G TGL G+ GP G PG G G+N G +G KG+ G +G G PG+ G G PG+ G G G+PG+ +G KGD G GP G G D G G G G++G GV G GI G G G +GP G+ GP G G G G G G G G G G+ G G G GP G +G G G+RG G PG++G G +G G G GP G RG PG G MG G+ G G+ G G G PG+KG + G+ G PG G G KGEPGP GL G G G PG GE GL G GP GE G+
Sbjct: 596 RGPPGERG---YPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKG-------------EPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGP---QGPPGVEGPRGLN------------------------------GPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGAD---------------GSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGD 1109 HSP 10 Score: 59.3066 bits (142), Expect = 4.244e-8 Identity = 103/287 (35.89%), Postives = 128/287 (44.60%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP 3322
G RG GL G+PG+ G G IGP G G RG +G+PG G GA G G TG G KG+RG G +G GDKG+RG G G PG G +KG G G G+ GP+G GE+G GP G+ G GT G+ G +G+ G++ GP G GEPG PG+ G+ G +GE+G KG+ GLIG TG GR G G G+ G G EG G+ G KG+ G P
Sbjct: 1321 GERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVG------------------------------QKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGT---PGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGL---------------------------IGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPGAPAP 1547 HSP 11 Score: 56.9954 bits (136), Expect = 2.085e-7 Identity = 202/546 (37.00%), Postives = 247/546 (45.24%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRG--------LLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEG---KTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA---------GPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE---AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP--------GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G GP GL G G+ G +G G KG G G+ GN GP G +G +G +G G GS G G GP GP G KG+ + G G KG G+ G PG +G GE+G +G LGR G+ G G G+KGD G+ G G +G++GIKG G + G +G +G SG PG PG G G G +G G G GI GQ GP GEKG G GL G TG PG+ G G GA GA+G G KG +G GI GP+GE G G G G+ G G G+ GR G G G Q ++GE G G G KG+ G G G G G D P G+ G PG+ G+ GP G G+ GE G +G+ GP G G G RG NGP G +G G VG PG G+ L+GI PG G G +GEP GPPGL G QG++G+ GP G G G G VG G+
Sbjct: 413 GAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGD----------------AGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDA---GRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGAR------GPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG-QSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNK-----------GEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRG---------------------------EKGNQGAVGVPGNPGKDGLRGI---PGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGD 891 HSP 12 Score: 55.8398 bits (133), Expect = 4.374e-7 Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPS--GQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG--IKGSRGPVGNQGRDGEK 2137
KG RGIRG G P G G++GE G G KGE G +G GP G+AG KGD G+QG G G +G G +G +GP G G PG IKG +G G GR+G +
Sbjct: 1206 KGERGIRGQPGLPATV-PDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQ 1311 HSP 13 Score: 55.0694 bits (131), Expect = 8.726e-7 Identity = 119/377 (31.56%), Postives = 149/377 (39.52%), Query Frame = 2
Query: 2900 IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGS-------GTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGET 4000
I G +G GPLG TGLKG G G++G G G G GP G G+ G G G++ G G G+ GP G PG PG G G +GQ G+ G +G +G+ GPRG G G G G + G G +G G G G+ G G G G +G+ GP G GP G G G+ GA PG PG G +G S G G+ G +G PG+ G G+ GP G GLDG+ GE PG G+R +G G PG+ G G +GEPG GL G G++G PG G T
Sbjct: 85 IAEKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLH---------------------------------GQAGVPGVQGPAGNPGA------PGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPM-----------KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEG------------------------------DTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGAT 381 HSP 14 Score: 54.6842 bits (130), Expect = 1.007e-6 Identity = 114/287 (39.72%), Postives = 132/287 (45.99%), Query Frame = 2
Query: 3167 EKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG--IVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSP---GTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
EKG +G G +GPTG G +G G G +G G +G PG G +GD G RG GL G G PG QG GN G G+ G+ G G G G G G+PGP G +G G G G P G G PG G AGL GP G GE GERGD GP G G G+ G G G GP P P + K + + G G+ GQKGE L G KG P G G G KGE G PG G +G++GN GP G TG G
Sbjct: 87 EKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGE---RGSPGLH------------GQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP---QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKG 355 HSP 15 Score: 54.6842 bits (130), Expect = 1.105e-6 Identity = 51/115 (44.35%), Postives = 60/115 (52.17%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG------------TRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G G+ G G KGD GP+G +G RG+ G+ GV G GI G +G P G AGV G G+ G G RG+DG KG+ GS PG G PG KG RG GN G G
Sbjct: 857 GPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGS---PGLVGMPGNKGDRGAPGNDGPKG 968 HSP 16 Score: 54.299 bits (129), Expect = 1.398e-6 Identity = 190/519 (36.61%), Postives = 228/519 (43.93%), Query Frame = 2
Query: 2495 PGTRGPSGLPG------KPGIDGKEGSIGPKGDLG---------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGK---FGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG--------IKGS---EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEG---ELGIQGPPGRKGELGP-----IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPG 3940
PGT G +G PG +PG G++G +G KGD+G P+G G G GI G G GP GE G G+RG G GP G+KGE G G G G G ++ KG KG G PG +G G KG GL G G G G GEKG G G G G G G IKG G+ G G +G G SGE G PG ++ K KG G G+ GP G G GE G G G +G +G PGV+G +G + GPRGE+G N G GV G + G++G PGR G+ GP I PGP+G G +G G G G +G G G GS G PG G G G SG G GE+GD GP G AG G G G G+ G DG +G+PG G +G GN G +G+ G DG G G G +G G PG GA G KG G
Sbjct: 533 PGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKG-----------------------NKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRG---LNGPRGEKG---------------------------NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998 HSP 17 Score: 53.5286 bits (127), Expect = 2.112e-6 Identity = 103/295 (34.92%), Postives = 126/295 (42.71%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKP-------GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLD 3343
GP G RG G PG P G G +G G G+ G +G+ G GP G+ GA+G G G G+ G G G +G G +GE GEKG+ G GR G G IG GE+G G G+ GL G G +G GS+G+ GL GS G G G PG+PG G GP G +G G G G+KG KGD GL GP+G PG +G+ G TG G G G G G+ G GP+G G D
Sbjct: 1204 GPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGE----------------------------------IGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDT---------------GPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQK---GDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRD 1446 HSP 18 Score: 53.5286 bits (127), Expect = 2.607e-6 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG-----TRGEVGM---------KGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G+ G GAKGD GP G++G +GE G+ +G+ G G+ G RG G+AG G +G+ G GP G G +G GS G PG G PG G +G G QG GE+
Sbjct: 1268 GASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGER 1383
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079001) HSP 1 Score: 86.6557 bits (213), Expect = 2.096e-16 Identity = 206/554 (37.18%), Postives = 246/554 (44.40%), Query Frame = 2
Query: 2495 PGTRGPSGLPG---KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGS---------KGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR--------IGEAGPPGK---TGASGAEGQPGVKGTKGD---TGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLP-------GKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGE-----RYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG RG +GLPG +PGI G++G +GP +GP G +G PG GI G RG+ G GE GS KGDRG G GP KG G+ G G GP G G G G G TGL G G VG +G G GLMG +G QG++G PG G G+ GEKG QG G GP G G GQ G G G++GD G G G PG G AGPPG+ G SG +G+ G+ G KG+ G+ G GE+G G G G+ G+ G G G G+ G G +G +GE G+ G PG KGE GP+GL G G G G+ G G PGLP G G QG G +G +GE GERG GP G+AG G RG GP G G G+ G G+ G +GE +KG KG PG G G +G G PGL G +G G G G GL GPIGP G GE
Sbjct: 889 PGDRGDAGLPGVSGRPGIVGEKGDVGP---IGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGP---------------------------------------------------KGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGA---------------PGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGL------------------------NGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGE 1349 HSP 2 Score: 84.7297 bits (208), Expect = 7.676e-16 Identity = 181/541 (33.46%), Postives = 222/541 (41.04%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGP---KGDLGPRGQSGNPGPQGIRG--ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP---------------------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSP-------GDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPG---QKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM 4009
PG GP GLPG G++G GP +GD GP G G PG +G+ G G++GP GE G +G G G G G+KGE+G +GV G G KGSVG +G G++GD G G +GL G +GE G G +G TG G +G +G+ G+PG P GD G GE+G G EKG +G+ GL GP G G G+ G G GASG G PG KG +GPRGE G G ++GE G+ G PGR G G IG PG +G GLPG AG G G G G AG +G+RG G G GQ G G G+ G GP+G G G G G G KG RGL G G PG QKG+ G+ G+ G +GA G +G GP G G G G PG KGE G++
Sbjct: 1048 PGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGL------------------------------------------QGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTG------------------------EKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGD------IGPRGEIGYPGVT----------------------------IKGEKGLPGRPGRNGRQGLIGAPGLIGER---------------------------GLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML 1461 HSP 3 Score: 84.3445 bits (207), Expect = 1.122e-15 Identity = 178/518 (34.36%), Postives = 218/518 (42.08%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSG-PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT--RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
PG RG G PG G+ G +G GP +G +G +G PGP+G RG RGQ G P +GD+G G +G TG+KGE+G+ G GP G AG KG RGL G G+ G G G KGD+GP G+ G G +GE G+ G G+ G G G G+ GE G PG AG E G+ G G IGP G+ G G AG PG+ G G G PG+KG DTG G +GE+GL+ G EG+ G +G +G GP GLPG VG G + G PG G GP G G +G G +G G G G GQ+G G + P G G G G +G GEPG+ GER L GI+G G G G GE G G GP+G RG PG +G G +G IG GE G
Sbjct: 1170 PGDRGDKGEPGLSGLPGLKGETGP---VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGA------------------------------KGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAG---------------------------------EPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKG---DTGPQGFKGERGLN------------------------------GFEGQKGDKG---DRGLQGPSGLPGLVGQKGDT------------------------GYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGML------------------PPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPG 1543 HSP 4 Score: 83.5741 bits (205), Expect = 1.558e-15 Identity = 185/539 (34.32%), Postives = 233/539 (43.23%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRG------PQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGA---SGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT------------IGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G PG G G PG+ G G+ G G KG+ GP+G G GP+G+ G RG+ G G +G G+ GK G +G G G+ G GP+G G+ GL G KG GP GP G G G G G RG+ G+ G G+ G++G +G P GV+G PG PG GV G G KG+ G G G PG G+ G PG G +G G PG +G G G+ G +G++G G G G G +G G PG G G+ G G G+ G+ G PG KG G GL GP G G + + G G PG SG GD GP G+PG PG+ GL G A G G GE+GD+G GI G G G G +GL G G+PG+KG GI G+PG +G G +G+ G PGL+G G +G GP G G G GP GE G
Sbjct: 764 KGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQ----------------------------PGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADG---SVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRG------------------------------RDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAV-HGRAGPPGEKGDQGRSGIDGRDGINGEKG------------------------------EQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERG 1210 HSP 5 Score: 80.1073 bits (196), Expect = 1.920e-14 Identity = 192/555 (34.59%), Postives = 234/555 (42.16%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQS--GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKG---TKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKG---ELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERG-----DRGPPGI---AGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G++G +G+PG PG+ G +G G KG+ G G S G PG G GA GQ G G G+ G +G G +G G K + GP G+KG GL G G G GP GE+G G G G+ G G G KG +G+TGL G+ G +G G PG+PG GV G KG +G G GP G E G KG+ GL G G PGR G G PG G S +G+PG G KGD G G GE+G + G +G G+ G+ GPPG G E G GL G G GP G +G G G G+ G+ G VG PG PGK GL+G G +G G GE G GPPG+ G G RGP GPIG G DG VG PG +G+ L G+ G PG +G +G G GPPG+ G G RG G KGE G G +G G G+
Sbjct: 496 GSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGK------------------------------------CSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKG---------------EFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQS-IKGEPGFHGRDGAKGDKGSFGRSGEKG--------------EPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFP---------------------------GADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGD 957 HSP 6 Score: 72.7886 bits (177), Expect = 3.420e-12 Identity = 200/562 (35.59%), Postives = 238/562 (42.35%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI------------------------------RGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXX--XSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL---------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
PG +GP+G PG PGI+GK+G G G G G SG PGP+G RG G +GP G G KG+RG GP G G +GE G G +G + GP+G +G+KG GL+GRKG GP G G G G G G G RG G G G TG G RG G++G PG+PG G G G GK G GP GP G P G G +G+ G GL GP G G+ G AG PG+ G EG PG KG KG G+ GP+G G G QG +G+ GI G PG KG G G G G G S P G+PG G G++G GG + AG +GD+G G+ G G+ G GP G G G RG G G GP G G G GL G GEPG+ L KG G+PG G G KG G PG+ GP+G+ G KGE GL G
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGN---EGPPGKKGEKGTAGLNGPKGS-------IGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGF---KGEKGLSG 696 HSP 7 Score: 68.1662 bits (165), Expect = 7.221e-11 Identity = 213/590 (36.10%), Postives = 260/590 (44.07%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---------GDVGPLGKTGLKGTRGEVGIKGS-----------------------------------EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGI---LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKA-----GLQGPAGGSGTQGEAGERGDRGPPGIA-------------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM--GPIGPVGEDG 4039
G RG G G+PG+ G++G GP+GD G GQ G PG G RG +G GP G G KGDRG+ G G G+ G++G+PG G G G GP G G G P G +GL G G GP G +G+K G+ GP GK G KGT G G KGS G GL GS+G +G G G+PGD+ + G G+ G G G G PG PG +G+ G+KGD+G GP G G G G PGK GA G G+ G G +G GI GP GE+G DG G G+ G G G +G G G +G G KG G G+PGP G G G+ G G PG G G G G PG+PG++ G G G G +G G G++G PG G GQ G GP G G G G G +G G G PG +G R L G +G G GAVG G PG GL G G+ G PGP+GE G+ GP+GP G +G
Sbjct: 295 GPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGA--PGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLG----RPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPG---------------EDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863 HSP 8 Score: 67.781 bits (164), Expect = 9.697e-11 Identity = 214/550 (38.91%), Postives = 258/550 (46.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGK---PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKT--GLMGSRGPQGVSGEPGSPGDA----GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNS-------GPQGVEGELGIQGPPGRKGELGPIGLP------GPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG GP+GL G+ PG++G G G KGD GP GQ G+ G +G G GQ+G G G G+ G G G G G+ G PG +G G GP G G GS G+KG +G GE G RG G G G G GE+GD GP G KG RGE G+KG +G + G M G G+ GE G P + + G +G G +G G VG +G PG G G G KG+ GL G G GR G GPPG TG G G+PG+ G G+ G G G G G G +G G GG GPQG+ G G+ GP G G+ G GLP GP G G G G GP G G G GP G G G AGL G G QG G+ G G PG+ G+ G+RG G G +G G G G G +G G+ G PGQKG+ +KG G + G KG+ PG G GP G+RG PG +G G+ G GP GE GE
Sbjct: 91 RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPY---GAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLP----GYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGA-------PGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGE 625 HSP 9 Score: 67.781 bits (164), Expect = 1.138e-10 Identity = 205/578 (35.47%), Postives = 244/578 (42.21%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---------------------QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL----------------GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV--------------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGL-----MGPIGPVGEDGE 4042
RGPPG RG PG+ G DG G GP G+ G G++G PG +G GA G G G G++G G GP+G G KGE+G G+ G G G G G G PG E G G G KG G G GEKG+ G G+TG+ G GE G G G TGL G+ GP G PG G G+N G +G KG+ G +G G PG+ G G PG+ G G G+PG+ +G KGD G GP G G D G G G G++G GV G GI G G G +GP G+ GP G G G G G G G G G G+ G G G GP G +G G G+RG G PG++G G +G G G GP G RG PG G MG G+ G G+ G G G PG+KG + G+ G PG G G KGEPGP GL G G G PG GE GL G GP GE G+
Sbjct: 596 RGPPGERG---YPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKG-------------EPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGP---QGPPGVEGPRGLN------------------------------GPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGAD---------------GSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGD 1109 HSP 10 Score: 59.3066 bits (142), Expect = 4.244e-8 Identity = 103/287 (35.89%), Postives = 128/287 (44.60%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP 3322
G RG GL G+PG+ G G IGP G G RG +G+PG G GA G G TG G KG+RG G +G GDKG+RG G G PG G +KG G G G+ GP+G GE+G GP G+ G GT G+ G +G+ G++ GP G GEPG PG+ G+ G +GE+G KG+ GLIG TG GR G G G+ G G EG G+ G KG+ G P
Sbjct: 1321 GERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVG------------------------------QKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGT---PGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGL---------------------------IGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPGAPAP 1547 HSP 11 Score: 56.9954 bits (136), Expect = 2.085e-7 Identity = 202/546 (37.00%), Postives = 247/546 (45.24%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRG--------LLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEG---KTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA---------GPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE---AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP--------GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G GP GL G G+ G +G G KG G G+ GN GP G +G +G +G G GS G G GP GP G KG+ + G G KG G+ G PG +G GE+G +G LGR G+ G G G+KGD G+ G G +G++GIKG G + G +G +G SG PG PG G G G +G G G GI GQ GP GEKG G GL G TG PG+ G G GA GA+G G KG +G GI GP+GE G G G G+ G G G+ GR G G G Q ++GE G G G KG+ G G G G G D P G+ G PG+ G+ GP G G+ GE G +G+ GP G G G RG NGP G +G G VG PG G+ L+GI PG G G +GEP GPPGL G QG++G+ GP G G G G VG G+
Sbjct: 413 GAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGD----------------AGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDA---GRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGAR------GPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG-QSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNK-----------GEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRG---------------------------EKGNQGAVGVPGNPGKDGLRGI---PGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGD 891 HSP 12 Score: 55.8398 bits (133), Expect = 4.374e-7 Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPS--GQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG--IKGSRGPVGNQGRDGEK 2137
KG RGIRG G P G G++GE G G KGE G +G GP G+AG KGD G+QG G G +G G +G +GP G G PG IKG +G G GR+G +
Sbjct: 1206 KGERGIRGQPGLPATV-PDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQ 1311 HSP 13 Score: 55.0694 bits (131), Expect = 8.726e-7 Identity = 119/377 (31.56%), Postives = 149/377 (39.52%), Query Frame = 2
Query: 2900 IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGS-------GTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGET 4000
I G +G GPLG TGLKG G G++G G G G GP G G+ G G G++ G G G+ GP G PG PG G G +GQ G+ G +G +G+ GPRG G G G G + G G +G G G G+ G G G G +G+ GP G GP G G G+ GA PG PG G +G S G G+ G +G PG+ G G+ GP G GLDG+ GE PG G+R +G G PG+ G G +GEPG GL G G++G PG G T
Sbjct: 85 IAEKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLH---------------------------------GQAGVPGVQGPAGNPGA------PGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPM-----------KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEG------------------------------DTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGAT 381 HSP 14 Score: 54.6842 bits (130), Expect = 1.007e-6 Identity = 114/287 (39.72%), Postives = 132/287 (45.99%), Query Frame = 2
Query: 3167 EKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG--IVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSP---GTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
EKG +G G +GPTG G +G G G +G G +G PG G +GD G RG GL G G PG QG GN G G+ G+ G G G G G G+PGP G +G G G G P G G PG G AGL GP G GE GERGD GP G G G+ G G G GP P P + K + + G G+ GQKGE L G KG P G G G KGE G PG G +G++GN GP G TG G
Sbjct: 87 EKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGE---RGSPGLH------------GQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP---QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKG 355 HSP 15 Score: 54.6842 bits (130), Expect = 1.105e-6 Identity = 51/115 (44.35%), Postives = 60/115 (52.17%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG------------TRGEVGMKGVKGEYGIQGPRG---PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G G+ G G KGD GP+G +G RG+ G+ GV G GI G +G P G AGV G G+ G G RG+DG KG+ GS PG G PG KG RG GN G G
Sbjct: 857 GPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGS---PGLVGMPGNKGDRGAPGNDGPKG 968 HSP 16 Score: 54.299 bits (129), Expect = 1.398e-6 Identity = 190/519 (36.61%), Postives = 228/519 (43.93%), Query Frame = 2
Query: 2495 PGTRGPSGLPG------KPGIDGKEGSIGPKGDLG---------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGK---FGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG--------IKGS---EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEG---ELGIQGPPGRKGELGP-----IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPG 3940
PGT G +G PG +PG G++G +G KGD+G P+G G G GI G G GP GE G G+RG G GP G+KGE G G G G G ++ KG KG G PG +G G KG GL G G G G GEKG G G G G G G IKG G+ G G +G G SGE G PG ++ K KG G G+ GP G G GE G G G +G +G PGV+G +G + GPRGE+G N G GV G + G++G PGR G+ GP I PGP+G G +G G G G +G G G GS G PG G G G SG G GE+GD GP G AG G G G G+ G DG +G+PG G +G GN G +G+ G DG G G G +G G PG GA G KG G
Sbjct: 533 PGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKG-----------------------NKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRG---LNGPRGEKG---------------------------NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998 HSP 17 Score: 53.5286 bits (127), Expect = 2.112e-6 Identity = 103/295 (34.92%), Postives = 126/295 (42.71%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKP-------GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLD 3343
GP G RG G PG P G G +G G G+ G +G+ G GP G+ GA+G G G G+ G G G +G G +GE GEKG+ G GR G G IG GE+G G G+ GL G G +G GS+G+ GL GS G G G PG+PG G GP G +G G G G+KG KGD GL GP+G PG +G+ G TG G G G G G+ G GP+G G D
Sbjct: 1204 GPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGE----------------------------------IGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDT---------------GPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQK---GDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRD 1446 HSP 18 Score: 53.5286 bits (127), Expect = 2.607e-6 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG-----TRGEVGM---------KGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G+ G GAKGD GP G++G +GE G+ +G+ G G+ G RG G+AG G +G+ G GP G G +G GS G PG G PG G +G G QG GE+
Sbjct: 1268 GASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGER 1383
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Match: vkg (gene:FBgn0016075 transcript:FBtr0333541) HSP 1 Score: 84.7297 bits (208), Expect = 8.747e-16 Identity = 191/546 (34.98%), Postives = 242/546 (44.32%), Query Frame = 2
Query: 2519 LPGKPGIDGKEGSIGPKGDLGPRGQSGNP------------------GPQGIRGARGQSGPTGELGSKGDRGKFGP-----------QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGV-----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPI-----GIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
L G+PG DG +G G GD G +G G P GP+G++GA+G+ G G G GDRG G GPTGD G++G PG G G E G+ G +G KG G G + +G++GP G++G+KG G+VG + G+ GL G GP+GV GE G G G N + G GP G G G G +G+KG G +G G GA G IG +G G G +G +G PG G G G++G GE+G + G G G+ GP+G GE G P G G+ GP G PG G G G+ G +PG PG+ G +G A SG +G+ GE G GP PG G GQRGP G G+ G G G PGP G G G G +G RGL G+ G PG+ G + L G G G G G+ G PGP G GPQG+ G G G G +G GP G
Sbjct: 684 LIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDG---------------------------------EPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVG---APGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERG------------------EIGYNGRQGDIGPRGPNGEFG---PKGLSGDDGPDGYPGANGLPGRKGETG------------------NPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRG 1154 HSP 2 Score: 71.633 bits (174), Expect = 8.352e-12 Identity = 197/523 (37.67%), Postives = 238/523 (45.51%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL-----GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGP------PGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
R GLPG G +G G G KG G N GP RG RGQ G TG GS G+RG G GP G +G +G+PG G G G G+ G G VG GPDG+ +VG L G TG G RG+ G G +G+ G GS+G +G +G+ G GDAG G GE G+ G G G G G G+KG+ G G TG G GE P G+ G G G GVKG KG+ G +G RGE G G PG G+ G GP G G+ G G PGR GE G G G G G G++ G G G++G G G G PG+ GL G G G +GE G G G G+ GN GQRG + +G GP G G+ G P G G G GS G +G+ G G G +G+ G+ G G GS G PG PG+ G G+RG G G G +GP GP GE G
Sbjct: 503 R---GLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGP---RGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGL---------------------------------PGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIG----------DRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRG-DFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFG 975 HSP 3 Score: 70.4774 bits (171), Expect = 1.584e-11 Identity = 214/567 (37.74%), Postives = 261/567 (46.03%), Query Frame = 2
Query: 2486 RGPPG---TRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELG---SKGDRGKF--------------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTG---APGRIGEAGPPGKT--------GASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPG----LPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXX-----------XXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP--GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG +G G PG+ GI G G +G G G +G PGP+G++G +G G G+ G +KG RG F G Q P G KG++G+ GS G G G G IG +G G G G+ G PG G G G+ G +G +G +G G G+ G GP G+ G KG G+ G G G GL G +G G G PG PG GV G KG G+ GL GP G APG G+ GP G + G G G PG G G G+ G RG++GL G G G G KG G PGR G +G +G G G QGP G +GE G +GL G G G G G G G G+ GD+G VG PG L ++ +G G G QGE GE+GD GP G G G +G G IG G G G G G G G +G GLDG+ G PG G++ G G G GA+G +G GPPG PQG G PG G G G IGP GE G+
Sbjct: 804 RGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYG---LAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGI---------------------------KGDDGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGI---NGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPG---PQGDVGFPGAPGHNGRHGLIGPKGELGD 1334 HSP 4 Score: 64.6994 bits (156), Expect = 8.719e-10 Identity = 191/551 (34.66%), Postives = 229/551 (41.56%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGP--------RGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR--GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR---IGEAGPPGKTGAS------------GAEGQPGVKGTKGDTGILGPRGEQGL--DXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
+G PG G GLPG GI G+ G +G G G +G+ G+ G G RG G G G GS G +G+ G G GD G+ G G G PG G +G G + G G G +G G+ G G G KG P G GE G GP G G KG +G +G++G G G G GP G G PG GD G G PG PG GE G+ G IG G G PG+ GE GPPG++G G G+PG KG KG+ G G G+ GL + G G +G+PGR G G +G +GE+G G G+ G G IG G GL G AGLQG G G GE GERG+ G G G++G RGPNG G P G G G G G G PG+KGE G G PG G G KG+ G GLTGP G G PG KG+ G +G
Sbjct: 569 QGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQ---------------------GAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSG------------------------------RRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFG------------------PKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVG 1050 HSP 5 Score: 62.003 bits (149), Expect = 6.976e-9 Identity = 183/536 (34.14%), Postives = 223/536 (41.60%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEG------SIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKF------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSG--EPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP--TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGET---GLMGPIGPVGE 4033
+G G+ GP+GLPG+ G+ G+ G G G+ G +G G PG GI G +G +G G G KG +G+ G G GD+G RG G QG G G G +G+ + G G QG GE+G +G +G G +GP G GE+GD+G G++G G+EG G G +GP+G G P GD GV G G G G G G PGP GE G G IG GP G PG G+ G PG G +G G G KG GD G G RGE G G QG G++G QG PG G G G PGLPGK G G G G G+AG G G G+ G GQ G + PG +G GLDG GE G G L G +G G +G G +GE G G GPQG+RG+ G G T GL G GP GE
Sbjct: 1063 KGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIG---------YAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGV---------AGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPGPQGDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGY-------------------------AIVGRQGDIGDIGFQGEPGWDGAKGEQGY---------------------------------PGLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMA-------------------RPGDRGEPGLDGFQGEEGDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGE 1503 HSP 6 Score: 60.8474 bits (146), Expect = 1.368e-8 Identity = 137/418 (32.78%), Postives = 170/418 (40.67%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV---------SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPG-----VKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELG-----PIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG------ETGLMGPIGPVGE 4033
KG++G +G G +G G +G GD+GP G+ G G +G+VG G +G+ G G GP+G SGEPG+PG G++ G G G+ GP+GAPG+ G GPPGK G G G+ G KGTKG+ RGE G G G G G +GS G++G G+ GE G G PG KG+ G P L GP G G G + G G GLQG G G GE G G G PG G +G G RG GK GEPG+ G++ +KG G G G GS GE G G TG G +G GP G L GPIG G+
Sbjct: 41 KGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGID---------------------------------GCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGN------RGET---------GQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLK---------GYKGYVGLQGDEGPQGPTGEQGAVGRNGLPGARGEIGGPG---------------------------------ERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGD 368 HSP 7 Score: 53.9138 bits (128), Expect = 1.632e-6 Identity = 176/549 (32.06%), Postives = 214/549 (38.98%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKP---------GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRG---------------ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP--IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTG----LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G PG G GL G P G+ G +G GP G P PGP G +G G+ GP G G GD G G +GP G + ER G+ G G +G PGPQGP GE G+ G G G G +GP GE G G G G +G RGEVG+ G +G G ++G G QG G G PGD G N G G GEKG++GD P + AGP G G G G PG G +G G+ GPRG QGL G+ G +G +G+ G GI G PG+ G GP G VG+ G G+ G G G G +GE G+RGD G G G G+ G +G G G G G DG GE G G+ KG+KG P + GEPG G TGP+G +G G +G GL G IG G GE
Sbjct: 312 KGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGDIGPPGEQGPPGLPGKPGRRGPIGLAGQSGDPGLNGSRGPPG-RSER------------------------GEAGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYN------------------------GLRGLPGEKGLRGDD-------CP--VCNAGPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQ---------------------GNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDT----------GDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGA------------PGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759 HSP 8 Score: 53.1434 bits (126), Expect = 3.452e-6 Identity = 112/308 (36.36%), Postives = 132/308 (42.86%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVG-----PLGKTGLKGTRGEVG------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
GPPG GP G G G G++G G +GD+GP+G+ G PG G G G GP G G G G GP G G G RG G G G+ G+ G G VG PG G G KG G G G G G G KGD G P G G +GE G +KG +G GL G GPQG +GE G+ G G+ PG RGE G G+ G G G PGR G+ G PG TGA G +G PG +G G TG+ G +G G
Sbjct: 66 GPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGL---------------------------PGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAG 346 HSP 9 Score: 52.7582 bits (125), Expect = 3.661e-6 Identity = 46/96 (47.92%), Postives = 53/96 (55.21%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
I G GAKG GP+G G +G G+ G GE G+ G G +G GV G IQGE GP G+ G KG G VG PG G G G +G G QG DG
Sbjct: 761 IPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDG 856 HSP 10 Score: 51.6026 bits (122), Expect = 8.008e-6 Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIA--GVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGP 2107
G G GAKG+ G G G G G +G+KG G QGPRGP GI KGD G+ G G G+ G+ G +G+ GPPG G G G RGP
Sbjct: 1209 GFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGP 1299
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Match: vkg (gene:FBgn0016075 transcript:FBtr0079036) HSP 1 Score: 84.7297 bits (208), Expect = 8.747e-16 Identity = 191/546 (34.98%), Postives = 242/546 (44.32%), Query Frame = 2
Query: 2519 LPGKPGIDGKEGSIGPKGDLGPRGQSGNP------------------GPQGIRGARGQSGPTGELGSKGDRGKFGP-----------QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGV-----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPI-----GIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
L G+PG DG +G G GD G +G G P GP+G++GA+G+ G G G GDRG G GPTGD G++G PG G G E G+ G +G KG G G + +G++GP G++G+KG G+VG + G+ GL G GP+GV GE G G G N + G GP G G G G +G+KG G +G G GA G IG +G G G +G +G PG G G G++G GE+G + G G G+ GP+G GE G P G G+ GP G PG G G G+ G +PG PG+ G +G A SG +G+ GE G GP PG G GQRGP G G+ G G G PGP G G G G +G RGL G+ G PG+ G + L G G G G G+ G PGP G GPQG+ G G G G +G GP G
Sbjct: 684 LIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDG---------------------------------EPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVG---APGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERG------------------EIGYNGRQGDIGPRGPNGEFG---PKGLSGDDGPDGYPGANGLPGRKGETG------------------NPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRG 1154 HSP 2 Score: 71.633 bits (174), Expect = 8.352e-12 Identity = 197/523 (37.67%), Postives = 238/523 (45.51%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL-----GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGP------PGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
R GLPG G +G G G KG G N GP RG RGQ G TG GS G+RG G GP G +G +G+PG G G G G+ G G VG GPDG+ +VG L G TG G RG+ G G +G+ G GS+G +G +G+ G GDAG G GE G+ G G G G G G+KG+ G G TG G GE P G+ G G G GVKG KG+ G +G RGE G G PG G+ G GP G G+ G G PGR GE G G G G G G++ G G G++G G G G PG+ GL G G G +GE G G G G+ GN GQRG + +G GP G G+ G P G G G GS G +G+ G G G +G+ G+ G G GS G PG PG+ G G+RG G G G +GP GP GE G
Sbjct: 503 R---GLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGP---RGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGL---------------------------------PGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIG----------DRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRG-DFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFG 975 HSP 3 Score: 70.4774 bits (171), Expect = 1.584e-11 Identity = 214/567 (37.74%), Postives = 261/567 (46.03%), Query Frame = 2
Query: 2486 RGPPG---TRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELG---SKGDRGKF--------------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTG---APGRIGEAGPPGKT--------GASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPG----LPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXX-----------XXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP--GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG +G G PG+ GI G G +G G G +G PGP+G++G +G G G+ G +KG RG F G Q P G KG++G+ GS G G G G IG +G G G G+ G PG G G G+ G +G +G +G G G+ G GP G+ G KG G+ G G G GL G +G G G PG PG GV G KG G+ GL GP G APG G+ GP G + G G G PG G G G+ G RG++GL G G G G KG G PGR G +G +G G G QGP G +GE G +GL G G G G G G G G+ GD+G VG PG L ++ +G G G QGE GE+GD GP G G G +G G IG G G G G G G G +G GLDG+ G PG G++ G G G GA+G +G GPPG PQG G PG G G G IGP GE G+
Sbjct: 804 RGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYG---LAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGI---------------------------KGDDGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGI---NGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPG---PQGDVGFPGAPGHNGRHGLIGPKGELGD 1334 HSP 4 Score: 64.6994 bits (156), Expect = 8.719e-10 Identity = 191/551 (34.66%), Postives = 229/551 (41.56%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGP--------RGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR--GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR---IGEAGPPGKTGAS------------GAEGQPGVKGTKGDTGILGPRGEQGL--DXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
+G PG G GLPG GI G+ G +G G G +G+ G+ G G RG G G G GS G +G+ G G GD G+ G G G PG G +G G + G G G +G G+ G G G KG P G GE G GP G G KG +G +G++G G G G GP G G PG GD G G PG PG GE G+ G IG G G PG+ GE GPPG++G G G+PG KG KG+ G G G+ GL + G G +G+PGR G G +G +GE+G G G+ G G IG G GL G AGLQG G G GE GERG+ G G G++G RGPNG G P G G G G G G PG+KGE G G PG G G KG+ G GLTGP G G PG KG+ G +G
Sbjct: 569 QGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQ---------------------GAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSG------------------------------RRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFG------------------PKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVG 1050 HSP 5 Score: 62.003 bits (149), Expect = 6.976e-9 Identity = 183/536 (34.14%), Postives = 223/536 (41.60%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEG------SIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKF------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSG--EPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP--TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGET---GLMGPIGPVGE 4033
+G G+ GP+GLPG+ G+ G+ G G G+ G +G G PG GI G +G +G G G KG +G+ G G GD+G RG G QG G G G +G+ + G G QG GE+G +G +G G +GP G GE+GD+G G++G G+EG G G +GP+G G P GD GV G G G G G G PGP GE G G IG GP G PG G+ G PG G +G G G KG GD G G RGE G G QG G++G QG PG G G G PGLPGK G G G G G+AG G G G+ G GQ G + PG +G GLDG GE G G L G +G G +G G +GE G G GPQG+RG+ G G T GL G GP GE
Sbjct: 1063 KGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIG---------YAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGV---------AGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPGPQGDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGY-------------------------AIVGRQGDIGDIGFQGEPGWDGAKGEQGY---------------------------------PGLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMA-------------------RPGDRGEPGLDGFQGEEGDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGE 1503 HSP 6 Score: 60.8474 bits (146), Expect = 1.368e-8 Identity = 137/418 (32.78%), Postives = 170/418 (40.67%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV---------SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPG-----VKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELG-----PIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG------ETGLMGPIGPVGE 4033
KG++G +G G +G G +G GD+GP G+ G G +G+VG G +G+ G G GP+G SGEPG+PG G++ G G G+ GP+GAPG+ G GPPGK G G G+ G KGTKG+ RGE G G G G G +GS G++G G+ GE G G PG KG+ G P L GP G G G + G G GLQG G G GE G G G PG G +G G RG GK GEPG+ G++ +KG G G G GS GE G G TG G +G GP G L GPIG G+
Sbjct: 41 KGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGID---------------------------------GCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGN------RGET---------GQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLK---------GYKGYVGLQGDEGPQGPTGEQGAVGRNGLPGARGEIGGPG---------------------------------ERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGD 368 HSP 7 Score: 53.9138 bits (128), Expect = 1.632e-6 Identity = 176/549 (32.06%), Postives = 214/549 (38.98%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKP---------GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRG---------------ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP--IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTG----LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G PG G GL G P G+ G +G GP G P PGP G +G G+ GP G G GD G G +GP G + ER G+ G G +G PGPQGP GE G+ G G G G +GP GE G G G G +G RGEVG+ G +G G ++G G QG G G PGD G N G G GEKG++GD P + AGP G G G G PG G +G G+ GPRG QGL G+ G +G +G+ G GI G PG+ G GP G VG+ G G+ G G G G +GE G+RGD G G G G+ G +G G G G G DG GE G G+ KG+KG P + GEPG G TGP+G +G G +G GL G IG G GE
Sbjct: 312 KGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGDIGPPGEQGPPGLPGKPGRRGPIGLAGQSGDPGLNGSRGPPG-RSER------------------------GEAGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYN------------------------GLRGLPGEKGLRGDD-------CP--VCNAGPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQ---------------------GNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDT----------GDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGA------------PGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759 HSP 8 Score: 53.1434 bits (126), Expect = 3.452e-6 Identity = 112/308 (36.36%), Postives = 132/308 (42.86%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVG-----PLGKTGLKGTRGEVG------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
GPPG GP G G G G++G G +GD+GP+G+ G PG G G G GP G G G G GP G G G RG G G G+ G+ G G VG PG G G KG G G G G G G KGD G P G G +GE G +KG +G GL G GPQG +GE G+ G G+ PG RGE G G+ G G G PGR G+ G PG TGA G +G PG +G G TG+ G +G G
Sbjct: 66 GPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGL---------------------------PGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAG 346 HSP 9 Score: 52.7582 bits (125), Expect = 3.661e-6 Identity = 46/96 (47.92%), Postives = 53/96 (55.21%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
I G GAKG GP+G G +G G+ G GE G+ G G +G GV G IQGE GP G+ G KG G VG PG G G G +G G QG DG
Sbjct: 761 IPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDG 856 HSP 10 Score: 51.6026 bits (122), Expect = 8.008e-6 Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIA--GVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGP 2107
G G GAKG+ G G G G G +G+KG G QGPRGP GI KGD G+ G G G+ G+ G +G+ GPPG G G G RGP
Sbjct: 1209 GFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGP 1299
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Match: col27a1b (collagen, type XXVII, alpha 1b [Source:NCBI gene;Acc:560145]) HSP 1 Score: 162.925 bits (411), Expect = 1.091e-39 Identity = 257/862 (29.81%), Postives = 348/862 (40.37%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGP------KGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGA---EGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXX------XXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSG---TQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPG---PPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
GPPG +G G PG PG+DG+ G GP +GD+G G+SG G G +G G++G G +G KG GK G G G GE+G G QG + G G LG +G G IGP G +G G +G TG G GE G+ G EG G GS G G GE G GD G G G GDIG +G G G G+ G PG G G EG PGV G G G GP+G +G N GP+G +G G +G GP+G+PGP G G G +G A G G G GD G G GLPGK G QG AG G QG G +G+RG PG +G G+RG NG G GK G+ G KG+ G +G PG +G G +G PG P G+ GP+G +G G +G G +G IGP G G G G G GPPGP G G P + Q + + + + T +D +F + ++ I I+ P G +++ AR C D+ + DG Y+IDPN G D+IEV C F+ +TC+ V + +LE +S QMNF+ +S++ Q I C ++ SE++K ++++ + + G G+++ + KDE DG ++T +F T D ++LPI++ N + K S L V +CF
Sbjct: 651 GPPGAKGILGEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQG------------------------------------QLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDG-----------------------------KVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKG---------------------------NKGPKGKNSP---RGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKRGLNG------------------------------GMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGPQGPPGDFGPVGVQGPKGPQGLMGMQGAIGPVGIIGPSGNPGPQGDKGNKGEMGPPGPRGPPGPPVSIFNPFYQENEALGAALHVFDSRSAIRSEMYQDTDL-PLLDQGSEIFKTLHYLSILIHSIKNPLG-TQENPARMCRDLLECEHRLNDGTYWIDPNLGCSSDNIEVTCSFTNGGQTCLKPV--------------------TASKLEIGVSL-----------IQMNFIHLLSSEAVQIITVHCLNISVWA----SEDSKTPSSSMVYFKAWDGQIIEAG-------GFIEPDLLKDE--------CWITDGRWHQT-----QFIFRTQDPNLLPIVEI-YNLPSTKPGSHYHLEVGPVCF 1329 HSP 2 Score: 108.227 bits (269), Expect = 6.792e-23 Identity = 187/545 (34.31%), Postives = 242/545 (44.40%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIG---PKGDLGPRGQSGNPGPQGIRGARGQSGP--------TGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTG---LMGSRGPQGV---SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELG----IQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPN---GPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR------GNPGPKGETGLMGPIGPVGEDG 4039
P G G+ G PG+ G+ G +G P G++G G+ G+PG G RG G +G GE G G G G QGPTG G +G G G G G GP GPDG KG+ G +G G G +G +G KG+EG+TG L+G +GP+G +GE G PG+ G KG +G +G +G G G G GP G G +G G G G G+ G++G G QG QGS G+ GP+G +GE G ++GPPG G++GP+G G G + G PG PG G G+ G G+PG+PG +G +G G G++G G +G P G +GN G GP GP G++G +G G PGP G G G G G G DG VG PG+ G + G G PG G+ G KGE G PG +GP GKR G PG +G+ G G G GE G
Sbjct: 570 PKVCGEPGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGHPGAPGERGLSGPAGAPVSHCYGKIGETGEAGPTGFTGVQGPTGPPGAKGIL------------------------------------------GEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKG---------------------------------SKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQG---------------------PQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRG------EPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQG 1012 HSP 3 Score: 105.145 bits (261), Expect = 5.128e-22 Identity = 192/537 (35.75%), Postives = 236/537 (43.95%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKP-----GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRG------ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGA---EGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXX------XXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG---SGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
G PG RG SG G P G G+ G GP G G +G +G PG +GI G G++GP+G G+KG++G G +G +G+KG G G++G G G G G G G G +G G G +G G+ G G LG +G G IGP G +G G +G TG G GE G+ G EG G GS G G GE G GD G G G GDIG +G G G G+ G PG G G EG PGV G G G GP+G +G N GP+G +G G +G GP+G+PGP G G G + GA G G G GD G G GLPGK G QG AG G QG G +G+RG PG +G G+RG NG G GK G+ G KG+ G +G PG +G G + GPPG GP G +G GP+G G+ G IGPVG
Sbjct: 610 GAPGERGLSGPAGAPVSHCYGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDG-----------------------------KVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKG---------------------------NKGPKGKNSP---RGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKRGLNG------------------------------GMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGPQ---GPPGDFGPVGVQGPKGPQGLMGMQGAIGPVG 1054 HSP 4 Score: 80.4925 bits (197), Expect = 1.618e-14 Identity = 121/357 (33.89%), Postives = 149/357 (41.74%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGK-EGSIGPKGDLGPRGQSGN---------PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP---IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
+G G+ GP G G+ G DGK EG GP GD+GP G G+ PG +G++G RG+ G G G+ G RG GP+G G+KG + G P GE G RG G G GP IG +G +GD GP G G G +G G G +G GL G GPQG +G PG PG G G KG +G G GP G G G G PGK G G +GQPG G +G G+LG G QG G+ GP GV+G G QG G +G +GP+G+ GP G
Sbjct: 794 QGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPK------------------------------------GKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQG------------------------------SFGPKGERGIPGQSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGPQG------------------------PPGDFGPVGVQGPKGPQGLMGMQGAIGPVGIIGPSG 1060 HSP 5 Score: 71.2478 bits (173), Expect = 1.097e-11 Identity = 138/409 (33.74%), Postives = 170/409 (41.56%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKF-GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGL---------IGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGD 3682
+G G GP G G G G G +G G+ G G G+ GPQG + G GP GE G +GD GK GP GP+GD G +G +G RG G G G G GE+G G G G G RG G KGS+G G G P+G SG GSPG GV G +G G++G +G GP G G G G G+ G GD+GL G G PG G GP G+ G G G PG +G G G G +G+QG G G++G QG G LGI GP G G+ GP+G+ GP G G G G G G+ GP+G G QG+ G +G+
Sbjct: 752 QGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQG---SLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGP------------------------------------------VGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKRGLNGGMGFPGKQGDQGFK---------------------GQPGDAGEQGFPGVLGIFGPQGPPGDFGPVGVQGPKGPQGLMGMQ---------------------GAIGPVGIIGPSGNPGPQGDKGNKGE 1073 HSP 6 Score: 64.6994 bits (156), Expect = 1.158e-9 Identity = 99/330 (30.00%), Postives = 130/330 (39.39%), Query Frame = 2
Query: 3167 EKGVKGDIGLIGPTGAPGRI----------------------GEAGPPGKTGASGAE--------GQPGVKGTKGDTGILGPRGEQGLDXXXXX--------XXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
E G +GD G+ G G PG G+ GPPG+ G G + G PG+ G +G G +GP GE GL G G + G+ G TG +GP G G G GPPG KG LG G PG+ G+AG GP G G QG+ G G+ G G+ G G G G G++G +G +GK+G+ G++G+ KG KG G +G +G+ GE G G GP+G RG TG MG G +G+ GE
Sbjct: 515 EPGFQGDKGIQGSPGLPGVQGKPGPQVDFYVFVYYCFLKGFPGDIGPPGQNGVEGPKVCGEPGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGHPGAPGERGLSGPAGAPVSHCYGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPG---------------------------------DPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGV------------------------KGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGT------TGFMGATGKMGQHGE 781 HSP 7 Score: 63.5438 bits (153), Expect = 2.373e-9 Identity = 103/277 (37.18%), Postives = 126/277 (45.49%), Query Frame = 2
Query: 3242 PGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQG--------VEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG--SGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
P + G G G+PG G +GD GI G G G+ P +G G+ GP G V GE G+ G PG GE GP+G GP G + G G G PG PG+ GL GPAG S G+ GE G+ GP G G G GP G GI+ G+PG G G G GP G++G G VG G+ GE+ + G KG+ G G G G GP G G G+RG PG KG G G +G +G GE
Sbjct: 501 PCQQGELGLPGEPGEPGFQGDKGIQGSPGLPGVQ--GKPGPQVDFYVFVYYCFLKGFPGDIGPPGQNGVEGPKVCGEPGMTGNPGMLGERGPVGFVGPFG------------------EMGLAGEKGHPGAPGERGLSGPAGAPVSHCYGKIGETGEAGPTGFTGVQGPTGPPGAKGIL------GEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGE 751 HSP 8 Score: 62.7734 bits (151), Expect = 3.970e-9 Identity = 46/102 (45.10%), Postives = 58/102 (56.86%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G G +G +G GP G G GE G GV GE GP GP+G G +GD+G++GE+G +G G KG EG G PG G G +G G G +G+ GEK
Sbjct: 636 GEAGPTGFTGVQGPTGPPGAKGILGEPGDPGVDGE---AGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEK 734 HSP 9 Score: 61.6178 bits (148), Expect = 9.078e-9 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVG---------------PPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG+ G +GA H G++G GE G G G G GP G +GI G GD G+ GE GP G DG KG++G VG G G+PG+ G +GP G G+ GE+
Sbjct: 613 GERGLSGPAGAPVSHC-YGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGER 728 HSP 10 Score: 60.077 bits (144), Expect = 2.909e-8 Identity = 47/99 (47.47%), Postives = 55/99 (55.56%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGN---PGIKGSRGPVGNQGRDG 2131
+ G G GD GP G G RGE G G G G+QG RG EG GV G+ G +G GP+G GNKG +G P G +GN PG G GP G GR+G
Sbjct: 815 VEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREG 913 HSP 11 Score: 57.3806 bits (137), Expect = 1.711e-7 Identity = 46/114 (40.35%), Postives = 57/114 (50.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPG-------------YAGNPGIKGSRGPVGNQGRDGE 2134
G G RG G KG G GQ+G G +G +G G G +G RG G G G +G GE G G +G++G +GS+G PG G PG G GPVGN+G GE
Sbjct: 723 GKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGE 836 HSP 12 Score: 57.3806 bits (137), Expect = 1.893e-7 Identity = 47/105 (44.76%), Postives = 56/105 (53.33%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---GYAGNPGIKGSRGPVGNQGRDGEK 2137
G G RG G GD G G G +GE G +G G G GPRG G G KG+ G +G+ PRG+ GN+G G VG P G G G +G GP G G+DG K
Sbjct: 826 GPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAK 930 HSP 13 Score: 56.6102 bits (135), Expect = 3.360e-7 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG RG SG +G GP G G RG +G +G +G+ G G G +G G+ GD+G G+ G GK G +G+ G+ G PG G+ G KG RG G G G++
Sbjct: 882 KGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKR 984 HSP 14 Score: 53.9138 bits (128), Expect = 2.300e-6 Identity = 43/104 (41.35%), Postives = 51/104 (49.04%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+KG G G G G GP G++G GE G G KG G QG G G G +GD G G G RG G G G +G G G G +G +GP G+ G G K
Sbjct: 700 FKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQGSLGSPGPK 803 HSP 15 Score: 53.1434 bits (126), Expect = 3.979e-6 Identity = 44/102 (43.14%), Postives = 53/102 (51.96%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
Y G G++G G +G G G G RG G KG KG G +G P G +G +G G G GPRG G +G EG GP G AG G KG G +G+ G G
Sbjct: 842 YPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVG 943 HSP 16 Score: 52.7582 bits (125), Expect = 4.751e-6 Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG G G G G+ GPSG G +GE G G++GE G +G G +G G GD G+ G GP GK G G+ G G G G+ G G G +G QG G
Sbjct: 656 KGILGEPGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTG 756 HSP 17 Score: 52.7582 bits (125), Expect = 5.671e-6 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---GYAGNPGIKGSRGPVGNQGRDG 2131
+GA G+ G+SG +G GP G G +G G +GE G +G GP G+ G +G IG +G G G DG G +G+ G P G+ G+ G+ G GP GN G G
Sbjct: 855 EGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPG 958 HSP 18 Score: 52.373 bits (124), Expect = 6.601e-6 Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYG---IQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G G+ G +GD G G+ G +G +G KG +G G + G +GPEG G G+ G GE G +G G G+ G++G G G G KGSRG G G G+
Sbjct: 672 GPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGK 775 HSP 19 Score: 52.373 bits (124), Expect = 7.366e-6 Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGR 2125
KG G G +G +G G G G +G++G G GE G G GP+G G G +G G+ G G+ G G EG GP G G+PG KG +G G+ G+
Sbjct: 716 KGPEGKIGKTGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGK 814 HSP 20 Score: 51.9878 bits (123), Expect = 7.749e-6 Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKG---VKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKD---------GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G RG+ G G +GD GP G G G GM G G+ G+ G GP+G AG G G+QG GP+G+ G +G G +G PG G+ G KG G G QG G
Sbjct: 904 GPRGVIGREGFEGDPGPDGAAGKDGAKGMPGDLGHDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGIPGQSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPG 1015
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Match: si:dkey-21p1.3 (si:dkey-21p1.3 [Source:ZFIN;Acc:ZDB-GENE-081105-162]) HSP 1 Score: 155.992 bits (393), Expect = 1.178e-37 Identity = 285/890 (32.02%), Postives = 383/890 (43.03%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT------------------RGEVGIKGSEGKTGLMGSRGPQ---GVSGEPGSPGD---------AGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGEL-------GIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXX--XXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPI------GIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVK--IRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQ-GGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGC----MYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G RGP GL GKPG G +G IG KG+ G RG +G PG GI G +G+ G G G G++GK GP+GP G G+ G G G G+ G +G+ G+ GP G G GV G G+ G +GPIGP+G+KG+ G G +GLKG G GI+G G GL G +GP+ G+SG PG GD GV G+ G G+ G G G G +G G PG GE G G IG G G PG G+ G G++G G +G+PG+KG+ G G +G G GL +G G G +G G G+ G+ G GP+G +G L G +G PGR+G G G PG GT G G G G P + +G +G G PG+ GLQG AG +G G G RG GP G G G+ GP+GPI G+ G G GQ G +G +G G GP G G+ G G PG KG KGIKG G G G KG PG PG+ G QGK G G KG+ G G G V + VK PP+ + K +R F + +D + + KD+ A +C ++ L + DG YY+DPN G D++ V C F+ TC+S V+ G++ ++ S + + L +D Q+ FLR ++ + Q I C + N +K L ++ I+ +V I GC R GSS +L D+ +LPI D + + + +CF
Sbjct: 350 GHRGPRGLQGKPGAPGIQGPIGKKGETGSRGLTGKPGKPGISGVKGKEGSVGLHGKPGEKGKIGPEGPKGKPGQ---------------PGLQGNIGQWGETGVRGLEGHQGPPGLPGPHGVAGYPGKDGPLGPIGPEGDKGNKGLRGDSGLKGVAGIDGEEGEKGKEGSVGDHGPKGIQGESGNQGLSGVKGPKGRDGMSGAPGQKGDPGSSGEKGHPGVRGQSGLVGQYGPGGNMGEGGDKGDKGLPGLAGETGTTGPIGPSGVIGLPGLTGKEGFGGQSGKHGPKGEPGLKGSSGGPGKIGSVGAIGL---IGKKGEPGKQGRVGHVGQPGAVGPQGPKGKQGSLGAPGKKGGTRGFPGRRGSKGVAGKPGRSGTDGLLGVIGTEGDPNDILDDRFSTEGDIGFRGRPGRPGLQGSAGATGIPGLQGSRGPAGPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGVKGNQGTPGYKGRPGPKGIKGESGARGRPGGKGLPGSPGIKGVQGKSGQKGVKGQRGRPGKPGIVSQ------------------------------------------VKPGPHTPPQRRGSQNKALSRMLRFDNFDDWIEENSHLQG------------TKDNPASSCRELSLIQPHLRDGHYYVDPNHGCPFDALRVFCNFTAGGLTCVSPVQSNISGVW--------PSSVDRSKMWFSELHKGFKLKYKDLDVVQLRFLRLHSNSATQSISLKCPK------KHSPTVNHWKTMLHLRGDSYEEINPP--------------------------HVIITRHGCEVTAQVRVHGSS---ELHRGDMQLLPIRDVFVEGGEETWKGHANIILGHLCF 1124 HSP 2 Score: 84.7297 bits (208), Expect = 7.708e-16 Identity = 194/556 (34.89%), Postives = 248/556 (44.60%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMG------SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPG------------------------VKGTKGDTGILGP------RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGS------KGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G+ GP+GLPG G DG G G +G GP+G+ G+PG QG+ G RG G G+ G G G G G +GD+G G+PG +G PG G G KG +GL G GS GP G G G G LG G +G RG G++G G G+ G G +G++G+PG PG +GV KG +G +GL G G G+IG GP GK G G +G G V G G G LGP +G +GL G G G G+ G G+ G++GS G+ GP+G++GE G QG G KG G G+ G G G G G G PG+ G++GL G G G GE G++GD+G PG+AG G GP GP G++ G PG G G G+ G+ G KGE LKG G PG IG+VG+ KGEPG G G G+ G GP+G G G +G G+ G
Sbjct: 224 GSNGPAGLPGPTGNDGFIGEPGRQGQDGPKGERGSPGIQGVPGPRGDKGRIGQGGFSGFPGPLGEMGESGDQGPEGEPGIKGRPGVPGGTG---------------------------SKGRKGLQGVSGSRGPDGTQGAHGSTGLLGSNGDRGHRGPRGLQGKPGAPGIQGPIGKKGETGSRGLTGKPGKPGISGV---------------------------------KGKEGSVGLHGKPGEKGKIGPEGPKGKPGQPGLQGNIGQWGETGVRGLEGHQGPPGLPGPHGVAGYPGKDGPLGPIGPEGDKGNKGLRGDSGLKGVAGIDGEEGEKGKEGSVGDHGPKGIQGESGNQGLSGVKGPKGRDGMSGAPGQ---------------KGDPGSSGEKGHPGVRGQSGLVGQYGPGGNMGEGGDKGDKGLPGLAGETGTTGPIGPSGVI------------------GLPGLTGKEGFGGQSGKHGPKGEPGLKGSSGGPGKIGSVGAIGLIGKKGEPGKQGRVGHVGQPGAVGPQGPKGKQGSLGAPGKKG 686 HSP 3 Score: 79.7221 bits (195), Expect = 3.165e-14 Identity = 190/562 (33.81%), Postives = 220/562 (39.15%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGP------------QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLM---GSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQP------GVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAG---------NMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN------------------PGPKGETGLMGPIGPVG 4030
G PG GPSG PG G +G G KGD +G +G PG QG RG GQSG GE GS G G GP QG G KGER G G G GP G+KG G G G GP+G GE GD GP G+ G+KG G G GS+G+ GL GSRGP G G GS G G N G++G +G GL G GAPG G G G+TG+ G G+P GVKG +G G+ G GE+G G GP+G G+ G+QG G+ GE G GL G G G GP G G PGK G GP G G +G G RGD G G+AG G G +GP GI +G G G G KG + G+ G+PG G GS GE G PG+ G G G PG GETG GPIGP G
Sbjct: 170 GKPGNLGPSGDPGLKARRGMKGESGQKGD---QGAAGLPGKQGFRGRGGQSGVLGETGSNGPAGLPGPTGNDGFIGEPGRQGQDGPKGER------------------------------GSPGIQGVPGPRGDKGRIGQGGFSGFPGPLGEMGESGDQGPEGEPGIKGRPGVPGGTGSKGRKGLQGVSGSRGPDGTQGAHGSTGLLGSN------------------------------GDRGHRGPRGLQGKPGAPGIQGPIGKKGETGSRGLTGKPGKPGISGVKGKEGSVGLHGKPGEKG------------------------KIGPEGPKGKPGQPGLQGNIGQWGETGVRGL------------------EGHQGPPGLPGPHGVAGYPGKDGPLGPIGPEGDKGNKGLRGDSGLKGVAGIDGEEGEKGKEGSVGDHGPKGI---------------------------QGESGNQGLSGVKGPKGRDGMSGAPGQKGDPGSSGEKGHPGVRGQSGLVGQYGPGGNMGEGGDKGDKGLPGLAGETGTTGPIGPSG 599 HSP 4 Score: 73.1738 bits (178), Expect = 2.619e-12 Identity = 202/598 (33.78%), Postives = 251/598 (41.97%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGP------------QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL------GKTGLKGT---RGEVGIKGSE------------------GKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---GVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQ------------------------PGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGER-------GDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXS-----RGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGE------TGLMGPIGPVGEDG 4039
G +GP G PG G G G G KG G +G SG+ GP G +GA G TG LGS GDRG GP QGP G KGE G+ G G G+ G+ G+ G++GSVG G GEKG +GP G+ GL+G GE G++G E GK G +G GP+G G G GD+G+ G G G++G +G G VG G G G G + GVKG G G +GAPG+ G+ G G+ G G GQ PG+ G G TG +GP G GL G GK G G +G GP+G G G G PG+ G +G IGL G G G G+ G G PG G QGP G G+ G G++ G RG G+AG G+ G +G +G++G +G +G G G PG +G R G KGS G G G G GP G+ G QGK+G+ G KG TGL GPIGP G G
Sbjct: 293 GDQGPEGEPGIKGRPGVPGGTGSKGRKGLQGVSGSRGPDGTQGAHGS---TGLLGSNGDRGHRGPRGLQGKPGAPGIQGPIGKKGE---------------------------------TGSRGLTGKPGKPGISGVKGKEGSVGLHGKPGEKGKIGPEGPKGKPGQPGLQGNIGQWGETGVRGLEGHQGPPGLPGPHGVAGYPGKDGPLGPIGPEGDKGNKGLRGDSGLKGVAGIDGEEGEKGKEGSVGDHGPKGIQGESGNQGLSGVKGPKGRDGMSGAPGQKGDPGSSGEKGHPGVRGQSGLVGQYGPGGNMGEGGDKGDKGLPGLAGETGTTGPIGPSGVIGLP------------GLTGKEGFGGQSGKHGPKGEPGLKGSSGGPGKIGSVGAIGLIGKKGEPGKQGRVGHV------------------GQPGAVGPQGPKGKQGSLGAPGKKGGTRGFPGRRGSKGVAGKPGRSGTDGLLGVIGTEGDPNDILDDRFSTEGDIGFRGRPGRPGLQGSAGATGIPGLQGSRGPAGPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGVKG 824 HSP 5 Score: 69.3218 bits (168), Expect = 3.789e-11 Identity = 133/433 (30.72%), Postives = 158/433 (36.49%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGA------RGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKG-----------TRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGP 3736
GP G G GL GK G G+ G GPKG+ G +G SG PG G GA +G+ G G +G G G GPQGP G +G P + G RG GR+GS G G G G G LG G +G T G++G +G G+ GL GS G G+ G GS G A G KG IGL G TG G IG G PG G G +GQ G G G TG+ GP G G+ G QG G G GP G KGE G G PG GLPG G++G G SG +G G+RG G PGI + + GP+ P
Sbjct: 596 GPSGVIGLPGLTGKEGFGGQSGKHGPKGEPGLKGSSGGPGKIGSVGAIGLIGKKGEPGKQGRVGHVGQPGAVGPQGPKGKQGS--------------------------------------LGAPGKKGGTRGFPGRRGSKGVAGKPGRSGTDGLLGVIGTEGDPNDILDDRFSTEGDIGFRGRPGRPGLQGSAGATGIPGLQGSRGPA------------------------------------GPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGV---------------------------KGNQGTPGYKGRPGPKGIKGESGARGRPG------------------------------GKGLPGSPGIKGVQGKSGQKGVKGQRGRPGKPGIVSQV-KPGPHTP 896 HSP 6 Score: 61.2326 bits (147), Expect = 1.130e-8 Identity = 132/401 (32.92%), Postives = 162/401 (40.40%), Query Frame = 2
Query: 2864 RGLLGRKGSVGPIGPD------GEKGDVGPLGKTGLK---GTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGD------TGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
RG +G +GS+G GP G+ G++GP G GLK G +GE G KG +G GL G +G +G G+ G G+ G N G G+ G G G G PGR G+ GP G+ G+ G +G PG +G KG +G GP GE G SG QG EGE GI+G PG G G G G G S G G G QG G +G G G+RG RGP G+ G G G GPIG G GSRGL GK G+PG + G+KG G++G G GE G G GP+GK G PG +G G G G
Sbjct: 148 RGDVGIEGSIGGPGPPGIKGAIGKPGNLGPSGDPGLKARRGMKGESGQKGDQGAAGLPGKQGFRGRGGQSGVLGETGSN------------------------------GPAGLPGPTGNDGFIGEPGRQGQDGPKGERGSPGIQGVPGPRGDKGRIGQGGFSGFPGPLGEMG---------------------------ESGDQGPEGEPGIKGRPGVPGGTGSKGRKGLQGVS---------------------------GSRGPDGTQGAHGSTGLLGSNGDRGHRGPRGLQGKPGAPGIQGPIG---------------------KKGETGSRGLTGKPGKPG------ISGVKGKEGSVGLHGKPGEKGKIGPEGPKGKPGQPGLQGNIGQWGETG 437 HSP 7 Score: 57.7658 bits (138), Expect = 1.577e-7 Identity = 76/231 (32.90%), Postives = 95/231 (41.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIG-----------------PKGDLGPRGQSGNPGPQGIRGA------RGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGE------------PGSPGDAGVN 3073
RG PG RG G+ GKPG G +G +G +GD+G RG+ G PG QG GA +G GP G GS G +GK GP GP G K G+ GL G+KG DG+KG +G +G TGL+G G G+KG++G G G GP+G+ GE PGSPG GV
Sbjct: 689 RGFPGRRGSKGVAGKPGRSGTDGLLGVIGTEGDPNDILDDRFSTEGDIGFRGRPGRPGLQGSAGATGIPGLQGSRGPAGPKGSIGLKGKTGPSGPIGPK------------------------------------------------GIPGLQGKKGD------DGQKGTMGQVGITGLQGPIGPPGVKGNQGTPGYKGRPGPKGIKGESGARGRPGGKGLPGSPGIKGVQ 865 HSP 8 Score: 56.6102 bits (135), Expect = 2.898e-7 Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV---KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA GI G G++G GP G +G +G+ G G KG G+QG +G +G G G +GI G GP G G KG++G+ PGY G PG KG +G G +GR G K
Sbjct: 752 GATGIPGLQGSRGPAGPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGVKGNQGT---PGYKGRPGPKGIKGESGARGRPGGK 853 HSP 9 Score: 56.6102 bits (135), Expect = 3.101e-7 Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGE------------YGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G +GS G KG GPSG +G +G G++G KG+ G+QGP GP G+ G +G G +G GP+G G G G G G G+PGIKG +G G +G G++
Sbjct: 763 RGPAGPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGVKGNQGTPGYKGRPGPKGIKGESGARGRPGGKGLPGSPGIKGVQGKSGQKGVKGQR 877 HSP 10 Score: 55.0694 bits (131), Expect = 1.003e-6 Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGN---PGIKGSRGPVGNQGRDGEK 2137
G++GS+GA G G G G G G G+KG+ G GP GP+GI G++G G G+ G G+ G G +G +GPPG GN PG KG GP G +G G +
Sbjct: 746 GLQGSAGATGIPGLQGSRGPAGPKGSIGLKGKTGPSGPIGPKGIPGLQGKKGDDGQKGTMGQVGITGLQGPIGPPGVKGNQGTPGYKGRPGPKGIKGESGAR 847 HSP 11 Score: 54.299 bits (129), Expect = 1.597e-6 Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPS---GQVGTRGEVGMKGVKGEYGIQGPR---GPEGIAGVKGDIGIQGETGPRGKDGN---------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
K RG++G SG KGD G + G+ G RG G GV GE G GP GP G G G+ G QG+ GP+G+ G+ +GD+G +G G++G PG G G G+QG +GE
Sbjct: 183 LKARRGMKGESGQKGDQGAAGLPGKQGFRGRGGQSGVLGETGSNGPAGLPGPTGNDGFIGEPGRQGQDGPKGERGSPGIQGVPGPRGDKGRIGQGGFSGFPGPLGEMGESGDQGPEGE 300 HSP 12 Score: 53.1434 bits (126), Expect = 4.183e-6 Identity = 47/113 (41.59%), Postives = 60/113 (53.10%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGETGPRGKDGN---------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G++G +G G G GP G G G G+ G G+ G +GPRG +G G++G IG +GETG RG G KG EGSVG G PG KG GP G +G+ G+
Sbjct: 314 GSKGRKGLQGVSGSRGPDGTQGAHGSTGLLGSNGDRGHRGPRGLQGKPGAPGIQGPIGKKGETGSRGLTGKPGKPGISGVKGKEGSVG---LHGKPGEKGKIGPEGPKGKPGQ 423
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Match: col1a2 (collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]) HSP 1 Score: 130.183 bits (326), Expect = 1.317e-29 Identity = 293/903 (32.45%), Postives = 371/903 (41.09%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQ------------------SGNPGPQGIRGARGQSGPTGELGSKG------DRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKG---------------------SEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE------------AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITN-KIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPM--KGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLE--TTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
GP G G +G PG GI G +G GP G G RG SG PGP G +G G GP G G +G +RG G G G+KGE G G +G G G G G +G PG G G G G GP G G RG G +G GP GP G G G G+TG +G +G G KG G G G GP G++G PG+PG G G G++GP G GP GK G G G G G G+ G++GP G G GP G G+ G G G QG G G G PG +G+ G G+PG VG G G GAPG G G G+PG G QG AG G+ G G+RG+ G PG AG +G GPNGP G V G G G G GP G+ G G G PG G R KG+ G G G G +G PG G+ GP G G+ GP G G GP GP G +G +G G G G GPPG RG G G G G PG PG +SG Y Q+ + D D K N +I+ + P G K+ ARTC DI+L + + G Y+IDPN+G D+I+ C FS +TCI + N+ + K T + ++ + + S TQ+ F+R +++ Q I + C S+ Y D +E K A +L +G D + + R F ++ DGC T G SK +E T S LPI+D D GL++ +CF
Sbjct: 549 GPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARGPSGTPGPDGNKGEPGAVGPAGAPGPQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGKDGARGAPGPSGPPGPAGANGDKGETGSFGPPGPAGPRGAPGERGESGPAGPSGFAGPPGADGQTGPRGEKGPAGGKGDAGPAGPAGPAGNTGPLGPSGPVGPPGARGDSGPTGLTGFPGAPGRV------------------------------------GPPGPAGIVGPAGL------TGPAGKDGPRGPRGDVGPAGPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGP------------QGQLGSQGFNGLPGSRGDRGLPGIPGSVGEPGRVGPAGAPGARGPGGNI---------GMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGAV---------GRPGNRGESGPSGPTGAVGPAGARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDGSNGMPGAIGPPGHRGPAGHVGPAGPPGSPGLPGPPGPSGGGYDTSGGYDEYRADQASLRAKDYEVDATIKSLNTQIENLLSPEGSKKNP-ARTCRDIRLSHPEWSSGFYWIDPNQGCTMDAIKAFCDFSTG-QTCIHPHPESIPRKNWYRSSQEKKHTWFGETINSGTEFAYNDETLSPQSMATQLAFMRLLANQAVQNITYHCKNSIAYMD---AENGNLKKAVLL-------------------QGSNDVELRAEGNSR--FTFSVLEDGCSRHT-GQWSKTVIEYRTNKPSRLPILDIAPLDIGGA-DQEFGLDIGPVCF 1351 HSP 2 Score: 84.3445 bits (207), Expect = 1.359e-15 Identity = 233/571 (40.81%), Postives = 282/571 (49.39%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQG---IRGARGQSGPTGELGSKGDRGKFGPQG---PTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVG------PLGKTGLK---------------GTRGEVGI---------------KGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE------------AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GP+GL G PG DG G GP G G G+ G GP G +G G +GP GE G GDRG G QG P G KGERG+PG G G GP G G +G+PG G KG G GP G G +G G+ G +G+ G G GEKG+ G GK G + G +GE G +G G G G GP G G+ G G+ G G KG+ G G GP G G G G GP G +G G GL G GAPGR+G GP G G +G G G G +G G +GP G G +G +GP+G G KG G+ G G+ G +GPQG G G G PG +G+ G G+PG VG G G GAPG G G G+PG G QG AG G+ G G+RG+ G PG AG +G GPNGP G VG G RG+ GP GP G +G G +G+ G G GE G+KG+R +KG++G PG +G PGP G +G G G GP G G GP GP G+DG
Sbjct: 501 GPVGPTGLRGSPGPDGNNGPAGPVGLAGAPGEKGEQGPSGAPGFQGLPGPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARGPSGTPGPDGNKGEPGAVGPAGAPGPQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGKDGARGAPGPSGPPGPAGANGDKGETGSFGPPGPAGPRGAPGERGESGPAGPSGFAGPPGADGQTGPRGEKGPAGGKGDAGPAGPAGPAGNTGPLGPSGPVGPPGARGDSGPTGLTGFPGAPGRVGPPGPAGIVGPAGLTGPAGKDGPRGPRGDVGPAGPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGPQGQLGSQGFNGLPGSRGDRGLPGIPGSVGEPGRVGPAGAPGARGPGGNI---------GMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGAVGRPGNRGESGPSGPTGAVGPAGARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGL------QGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDG 1056 HSP 3 Score: 74.3294 bits (181), Expect = 1.370e-12 Identity = 235/584 (40.24%), Postives = 282/584 (48.29%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKG------DRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPI------GPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGS---PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGV---KGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXN---------------SGPQGVEGELGIQGPPGRKGELGPIGLPGPVG---------------TXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGK------AGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP---------GPPGLTGPQ---GKRGNPGPKGETGLMGPIGPVGEDGE 4042
GP G RGP G G G+ G G GP G GPRG G PG +G G G++G G +G++G G G +GP+G G+ G G PG G +G GN G GP G G G G KG VGP GPDG G GP+G G G +GE G G+ G GL G GP G +G+PG PGD GV+G G +G++G+ GP G G QG G GP G G KG+ G +GP GAPG G AG PG+ GA+G PG KG KG+ G G G G DG G G G G G G +G TG+ G G G G GPPG G+ GP G GP G +GP G G GPPG G +G G G PG PG+ AG+ GPAG +G G+ G RG RG G AG G+ G GP+G+ G GP G+ G G GP G G GS+G +G PG +G+R L GI GS G G VG G P G PG+TGPQ G+ G+PG G G G G G+ GE
Sbjct: 381 GPLGLRGPRGAAGTRGLPGLAGRSGPMGMPGPRGGVGAPGARGPPGDAGRAGEAGLVGARGLPGSPGSSGPPGKEGPSGAAGQ------------------DGRTGPPGPTGPRGQPGNIGFPGPKGPSGEAGKPGEKGPVGPTGLRGSPGPDGNNGPAGPVGLAGAPGEKGEQGPSGAPGFQGLPGPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARGPSGTPGPDGNKGEPGAVGPAGAPGPQGAAGMPGERGAAGT---PGAKGEKGEAGYRGLEGNAGKDGARGAPGPSGPPGPAGANGDKGETGSFGPPGPAGPRGAPGERGESGPAGPSGFAGPPGADGQTGPRGEKGPAGGKGDAGPAGPAGPAGNTGPLGPSGPVGPPGARGDSGPTGLTGFPGAPGRVGPPGPAGIVGPAGLTGPAGKDGPRGPRGDVGPAGPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGPQGQLGSQGFNGL---PGSRGDRGLPGIPGSVGEPGRVGPAGAPGARGPGGNIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGE 940 HSP 4 Score: 70.4774 bits (171), Expect = 2.258e-11 Identity = 209/566 (36.93%), Postives = 254/566 (44.88%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDV---------------GPLGKTGLKGTRGE------VGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ---------------------------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
PG +GPSG GKPG G G G +G GP G +G GP G+ GA G+ G G G+ G +G GP GP G+ G + G RG+ G +G GP G GE+G+ GP G G G +GE G G +G G+ G RG G G G G+AG G +G GK G++G GP G G G G +GE G G G GP GAPG GE+GP G +G +G G G G +G+ G G +G+ G GP GP G+ G G G G G+ G+SGP G+ G G GPPG G +GP GL GP G GP G G GP G PG+ G+ GP G +G + G G RGDRG PGI G++G+ G GP G G GP G G G GP G G +GS G DG G PG G + +G GSPGT G VG+ G GP G G G RG GP G TG +GP G G G
Sbjct: 485 PGPKGPSGEAGKPGEKGPVGPTGLRGSPGPDGNNGPAGPVGLAGAPGEKGEQGPSGAPGFQGLPGPAGPVGEAG---------------------------------------------KPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARGPSGTPGPDGNKGEPGAVGPAGAPGPQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGKDGARGAPGPSGPPGPAGANGDKGETGSFGPPGPAGPRGAPGERGESGPAGPSGFAGPPGADGQTGPRGEKGPAGGKGDAGPAGPAGPAGNTGPLGPSGPVGPPGARGDSGPTGLTGFPGAPGRVGPPGPAGIVGPAGLTGPAGKDGPRGPRGDVGPA---------------GPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGPQGQLGSQGFNGLPGSRGDRGLPGIPGSVGEPGRVGPAGAPGARGPGGNIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGAVGRPGNRGESGPSGPTGAVGPAGARGAPG 990 HSP 5 Score: 58.151 bits (139), Expect = 1.267e-7 Identity = 157/451 (34.81%), Postives = 174/451 (38.58%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRG------------------ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV------------GIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
RG G GPSG G PG DG+ GP+G+ GP G G+ GP G G ARG SGPTG G G G+ GP GP G G G G G G G +G VGP GP GE G +GPLG G KG GE G GS+G GL GSRG +G+ G PGS G+ G GP G G G G G G+ G G G G+PG G G PG G G G+PG GT G G GP G G G G GE G GP G G G G PGP G G G G G G G G PGL G G GP+G SG G AG G RGP G G G+ G NG G +
Sbjct: 704 RGESGPAGPSGFAGPPGADGQ---TGPRGEKGPAGGKGDAGPAGPAGPAGNTGPLGPSGPVGPPGARGDSGPTGLTGFPGAPGRVGPPGPAGIVGP---------------------------------------AGLTGPAGKDGPRGPRGDVGPAGPPGENGMIGPLGLAGEKGPPGEAGAPGAPGPAGPQGQLGSQGFNGLPGSRGDRGLPGIPGSVGEPG---------------RVGPAGAPGARGPGGNIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGTAGPVGAPGPNGPSGA---------------------------VGRPGNRGESGPSGPTGAVGPAGARGAPGPAGP------RGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDGSNGMPGAI 1064 HSP 6 Score: 57.7658 bits (138), Expect = 1.333e-7 Identity = 198/557 (35.55%), Postives = 231/557 (41.47%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---------------------GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRG------------------PNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGE---TGLMGPIGPVGEDGE 4042
G RGPSG PG PG G +G G G+ G G G GP G G G+ G G G GDRG G QG G G PG G G +G G+ GRKG G G GE G G G G +G RG G +G G G G+RG G +G G G G G PG PG G KG G G GP+GA G+ GE GP G G G G PG G G G G G G G GP G G +G G G +G G+ GP GV+G+ G++ G G +G GP+GL GP G +G GLPG AG GP G G +G G G RGPPG AG G+ G GP G G DG G PGP GP G GN G G +G G+ G+PG+KG G++GSPG G+ G GP GL G G++G GP G GL GP GPVGE G+
Sbjct: 87 GPRGPSGSPGAPGAQGLQGHAGEPGEPGQAGAIGARGPPGPPGKNGEDGNNGRPGKPGDRGVLGAQGARGFPGT------------------------------------PGLPGMKGHRGYNGIDGRKGEPGAAGAKGENGAAGSNGTPGQRGGRGLPGERGRVGPAGPAGARGADGNTGPAGPAGPLG---------------------SAGPPGFPGAPGPKGELGPAGPTGPSGAQGQRGEPGPNGAVGPVGPPGNPGANGINGAKGAAGLPGIAGAPGFPGPRGGPGPQGPSGASGPRGLGGDPGPVGVKGDSGVKGEPGSAGPQGPPGPSGEEGKRGSTGEQGPTGPLGLRGPRGAAGTR------------------------GLPGLAGRSGPMGMPGPRGGVGAPGARGPPGDAGRAGEAGLVGARGLPGSPGSSGPPGKEGPSGAAGQDGRTGPPGPTGPRGQPGNIGFPGPKGPSGEAGKPGEKGPVGPTGLRGSPGPD---GNNGPAGPVGLAGAPGEKGEQGPSGAPGFQGLPGPAGPVGEAGK 559 HSP 7 Score: 56.225 bits (134), Expect = 3.957e-7 Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRG---------KDGNKGDEGSVGPPGYAG 2077
G G RG+ G G G G G +G+ GMKG++G G+QG GP G +G G GI G +GPRG KDG+ G G++GPPG+ G
Sbjct: 981 GPAGARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDGSNGMPGAIGPPGHRG 1071 HSP 8 Score: 53.9138 bits (128), Expect = 2.193e-6 Identity = 201/569 (35.33%), Postives = 243/569 (42.71%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRG---ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV---GIKGSEGKTGLMG---------------------SRGPQGVSGEPGS---PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGK------TGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGK---VGEPGQKGER------------YLKGIKGSPGTIGAVGSKGEP---GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
PG +G G G G G+ G+ G KG+ G G +G PG +G RG RG+ GP G G++G G GP GP G G G PG G PGP G LG G GP G G++G+ GP G G G G GI G++G GL G + GP+G+ G+PG GD+GV GE G G QG GP+G G +G G+ GP G G++G G G G PG G +GP G GA GA G PG G G+ G++G RG G G GP G +G G G+ GR G G +GP+G G +G GP G GE G G GPVG +G G PG G GPAG G G GE+G++GP G G G GP GP+G G G RG+ G G G KGER G +G GT G G+KGEP GP G GPQG G PG +G G G G GE G
Sbjct: 164 PGMKGHRGYNGIDGRKGEPGAAGAKGENGAAGSNGTPGQRGGRGLPGERGRVGPAGPAGARGADGNTGPAGPAGPLGSAGPPGFPGAPGPKGE------------------------------------LGPAGPTGPSGAQGQRGEPGPNGAVGPVGPPGNPGANGINGAKGAAGLPGIAGAPGFPGPRGGPGPQGPSGASGPRGLGGDPGPVGVKGDSGVKGEPGSAGPQGPPGPSGEEGKRGSTGEQGPTGPLGLRGPRGAAGTRGLPGLAGRSGPMGMPGPRGGVGAPGARGPPGDAGRAGEAGLVGARGLPGSPGSSGPPGKEGPSGAAGQDGRTGPPGPTGPRGQPGNIGFPGPKGPSGEAGKPGEKGPVGPTGLR------------------------GSPGPDGNNGPAGPVGLAGAPGEKGEQGPSGAPGFQGLPGPAGPVGEA---------------------GKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARGPSGTPGPDGNKGEPGAVGPAGAPGPQGAAGMPGERGAAGTPGAKGEKGEAG 651 HSP 9 Score: 51.9878 bits (123), Expect = 7.514e-6 Identity = 45/103 (43.69%), Postives = 55/103 (53.40%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGD---IGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G G G+ G G+ G SG G G VG G +G G GPRG +G+AG KGD G++G G +G G G G GP G AG G +G GP G G+DG
Sbjct: 954 GPNGPSGAVGRPGNRGESGPSGPTGAVGPAGARGAPGPAGPRGEKGVAGEKGDRGMKGLRGHPGLQGMPGPNGPSGDSGPAGIAGPSGPRGPAGPNGPAGKDG 1056
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Match: col11a1a (collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]) HSP 1 Score: 129.413 bits (324), Expect = 1.979e-29 Identity = 122/475 (25.68%), Postives = 191/475 (40.21%), Query Frame = 2
Query: 3605 GLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDAL---FDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G PGK G GP G SG G G RG GP G+ G GQ GP GP+ + G GL G +G PG++GE KG +G PG GA GSKG+ GP GP+G +G+ GP G+ G G + + I +P + ++ A + +D + + F ++ + I+R+++P G +++ AR+C D++L + DG+YYIDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G I D ++ QM FL+ + + Q + + C QSV + D+ ++ H S D E D Y + DGC R + ++ T + +PI+D + D+ + G V +CF
Sbjct: 989 GPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPM--------------VREKIMFLLFFLSGHPGLIGLIGPPGEQGE---KGDRGLPGPQGAAGSKGDNGP---QGPKGSKGSTGPAGQKGDTGTV--------------------------------GPPGPPGPPGEVIQPLPIHSPKKSRRSIDMQADEAGTMLDYGEGMEDIFSSLNNLKQDIERMKYPMG-TQNNPARSCKDLQLAHPEFPDGEYYIDPNQGCSGDSFKVYCNFTAGGETCIFPDKKSNGVRISSWPKEVPGSWFSEFK-RGKILSYVDAEGNSINMVQMTFLKLLTASARQNLTYSCHQSVAWHDATTDSYDR-------ALHFLGSND---------EEISYDNNPY----------IKALSDGCAVRKGYGKTVLEINTPKIDQVPIVDVKFTDFGDPN-QKFGFEVGPVCF 1382 HSP 2 Score: 105.916 bits (263), Expect = 2.946e-22 Identity = 64/218 (29.36%), Postives = 98/218 (44.95%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK----AFRYESGNSLMAKSDVLF-QGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
VD+L ++ G FC N R A++ L A + LF G FP++FSIL T K +A + SI N+ L V GR Y D P+ + L +L DG+WHR+ SV+K +V++++DC+ + L R+ + G + SF G + LL+V A+ C+ Y+PDC+ D + Q P
Sbjct: 25 VDVLKVLEFPTVPEGVEKTSGFCTNRRASQPDAAYKISKNAQLSAPTKQLFPDGVFPEDFSILTTIKPKAGIQSFLLSIYNEKGVQQLGVEVGRSPVFLYEDQEGKPAPEDY-PLFRALNLADGKWHRVGISVEKKTVTIVVDCKKKLTKPLGRSDHASIDTKGITVFGTRILDEESFEGDIQQLLIVADPKAAYDYCEHYSPDCDVPHKDTLQAQEP 241 HSP 3 Score: 62.003 bits (149), Expect = 8.563e-9 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQV------GTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
Y G RG++G+ G +G G G+ G +G++G+KG +GE G+ GPRG +G G KG G GE+GP+G G KG G G PGY G G KG G G +G+ G
Sbjct: 596 YPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGVAGKAGPRGQRG 703 HSP 4 Score: 58.151 bits (139), Expect = 1.103e-7 Identity = 109/299 (36.45%), Postives = 125/299 (41.81%), Query Frame = 2
Query: 3170 KGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGE---------------------LGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
KG GD G GP G PG+IG+ G G+ GA GA G PG G+KGD G G G G G G G G G G+ G +G G GP+G+ GE QG PG +G PIG PGP G G G G G G G+ G PG G GL+G G G G GE G GP G AG G+ GP G S G GK+G PG G +G KG G G G +G GP G G +G G PGPKG
Sbjct: 465 KGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPGLPGEKGHRGETGPAGPPGPTGEDGPRGEDGEIGPRGLAGESYLGHRFSCALHHKHLIIFHCCHFQGQPGPQG---PIGYPGPRGVKGADGVRGLKGGKGEKGEDGF------PGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQG------------------------------SAGEKGKLGVPGLPGYPGRQGPKGVAGKAGPRGQRGPTGPRGARGARGPTGKPGPKG 724 HSP 5 Score: 55.0694 bits (131), Expect = 9.802e-7 Identity = 116/293 (39.59%), Postives = 133/293 (45.39%), Query Frame = 2
Query: 2882 KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG------RIGEAGPPGKT---GASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNG 3733
KG G GP G +G GP G+ G G RG G G+ G G GS+G +G G PG PG+ G G G G PGP GE G +G+ G IGP G G R A +GQP G +G G GPRG +G D G G KG KG +G+ G G G+ G +G GELG+ GP G G GP G GP G SGP G G G G PGLPG G QGP G G+AG RG RGP G G G RGP G
Sbjct: 465 KGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPGLPGEKG------------------HRGETGPAGPPGPTGEDGPRGEDGEIGPRGLAGESYLGHRFSCALHHKHLIIFHCCHFQGQP---GPQGPIGYPGPRGVKGAD---GVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGV------------PGLPGYPGRQGP---KGVAGKAGPRGQRGPTGPRGARGARGPTG 718
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Match: col11a1a (collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]) HSP 1 Score: 129.413 bits (324), Expect = 2.040e-29 Identity = 122/475 (25.68%), Postives = 191/475 (40.21%), Query Frame = 2
Query: 3605 GLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDAL---FDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G PGK G GP G SG G G RG GP G+ G GQ GP GP+ + G GL G +G PG++GE KG +G PG GA GSKG+ GP GP+G +G+ GP G+ G G + + I +P + ++ A + +D + + F ++ + I+R+++P G +++ AR+C D++L + DG+YYIDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G I D ++ QM FL+ + + Q + + C QSV + D+ ++ H S D E D Y + DGC R + ++ T + +PI+D + D+ + G V +CF
Sbjct: 1070 GPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPM--------------VREKIMFLLFFLSGHPGLIGLIGPPGEQGE---KGDRGLPGPQGAAGSKGDNGP---QGPKGSKGSTGPAGQKGDTGTV--------------------------------GPPGPPGPPGEVIQPLPIHSPKKSRRSIDMQADEAGTMLDYGEGMEDIFSSLNNLKQDIERMKYPMG-TQNNPARSCKDLQLAHPEFPDGEYYIDPNQGCSGDSFKVYCNFTAGGETCIFPDKKSNGVRISSWPKEVPGSWFSEFK-RGKILSYVDAEGNSINMVQMTFLKLLTASARQNLTYSCHQSVAWHDATTDSYDR-------ALHFLGSND---------EEISYDNNPY----------IKALSDGCAVRKGYGKTVLEINTPKIDQVPIVDVKFTDFGDPN-QKFGFEVGPVCF 1463 HSP 2 Score: 105.145 bits (261), Expect = 5.070e-22 Identity = 64/218 (29.36%), Postives = 98/218 (44.95%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK----AFRYESGNSLMAKSDVLF-QGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
VD+L ++ G FC N R A++ L A + LF G FP++FSIL T K +A + SI N+ L V GR Y D P+ + L +L DG+WHR+ SV+K +V++++DC+ + L R+ + G + SF G + LL+V A+ C+ Y+PDC+ D + Q P
Sbjct: 29 VDVLKVLEFPTVPEGVEKTSGFCTNRRASQPDAAYKISKNAQLSAPTKQLFPDGVFPEDFSILTTIKPKAGIQSFLLSIYNEKGVQQLGVEVGRSPVFLYEDQEGKPAPEDY-PLFRALNLADGKWHRVGISVEKKTVTIVVDCKKKLTKPLGRSDHASIDTKGITVFGTRILDEESFEGDIQQLLIVADPKAAYDYCEHYSPDCDVPHKDTLQAQEP 245 HSP 3 Score: 61.6178 bits (148), Expect = 9.195e-9 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQV------GTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
Y G RG++G+ G +G G G+ G +G++G+KG +GE G+ GPRG +G G KG G GE+GP+G G KG G G PGY G G KG G G +G+ G
Sbjct: 677 YPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGVAGKAGPRGQRG 784 HSP 4 Score: 58.9214 bits (141), Expect = 6.783e-8 Identity = 109/299 (36.45%), Postives = 125/299 (41.81%), Query Frame = 2
Query: 3170 KGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGE---------------------LGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
KG GD G GP G PG+IG+ G G+ GA GA G PG G+KGD G G G G G G G G G G+ G +G G GP+G+ GE QG PG +G PIG PGP G G G G G G G+ G PG G GL+G G G G GE G GP G AG G+ GP G S G GK+G PG G +G KG G G G +G GP G G +G G PGPKG
Sbjct: 546 KGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPGLPGEKGHRGETGPAGPPGPTGEDGPRGEDGEIGPRGLAGESYLGHRFSCALHHKHLIIFHCCHFQGQPGPQG---PIGYPGPRGVKGADGVRGLKGGKGEKGEDGF------PGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQG------------------------------SAGEKGKLGVPGLPGYPGRQGPKGVAGKAGPRGQRGPTGPRGARGARGPTGKPGPKG 805 HSP 5 Score: 55.0694 bits (131), Expect = 9.337e-7 Identity = 116/293 (39.59%), Postives = 133/293 (45.39%), Query Frame = 2
Query: 2882 KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG------RIGEAGPPGKT---GASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNG 3733
KG G GP G +G GP G+ G G RG G G+ G G GS+G +G G PG PG+ G G G G PGP GE G +G+ G IGP G G R A +GQP G +G G GPRG +G D G G KG KG +G+ G G G+ G +G GELG+ GP G G GP G GP G SGP G G G G PGLPG G QGP G G+AG RG RGP G G G RGP G
Sbjct: 546 KGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPGLPGEKG------------------HRGETGPAGPPGPTGEDGPRGEDGEIGPRGLAGESYLGHRFSCALHHKHLIIFHCCHFQGQP---GPQGPIGYPGPRGVKGAD---GVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGV------------PGLPGYPGRQGP---KGVAGKAGPRGQRGPTGPRGARGARGPTG 799
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Match: ENSXETT00000017769.1 (collagen, type XXVII, alpha 1 [Source:NCBI gene;Acc:100490770]) HSP 1 Score: 156.762 bits (395), Expect = 1.593e-37 Identity = 286/898 (31.85%), Postives = 378/898 (42.09%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTG------------LKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASG-------------------------AEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEG------ELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM------GPIG---------PVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRT-PGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
PG GPSG PG+ GI G G G +G +G G+ G+ GPQG A+G+ GP GE G KGD G G G G G+RGDPG +G E G+ G G KG +G GP+GEKG+ G G G ++G G+ G +G +GK G GS+G +G GE G PGD G G +G KG G GP G+PGR+G G PG G G AEG PG G +G G G RGE G G G G +G RG G+QG G+SGP+G++G +G++G PG+ GE G G PG +G +GP G G G G +G G G GSPGL G+ G G G +GT G+ G G G PG G G RG G G +G G RG++G +G G KGE KG G PG +G G G GP G G G +G GPKG GLM GP+G PVG+ G G G GP GPPGP G G PG S + + SSG +ST VD +F + +++ I+ I+ P G +D+ AR C D+ +++ DG Y+IDPN G D+IEV C F+E +TC+ + + ++E + R QMNFL +S++ Q I F C + S S+ +FK + H F + EG +F + DGC + + T D + PI+D + G+ T+ L V S+CF
Sbjct: 959 PGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQG---AKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEG------------------------------------ESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTG------------------------------NQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGKAEGTPGAPGDRGPVGDGGDRGEPG---DPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPG---------------------KRGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDNGMPGPRGPPGPRGKPGPPGPSVILDSYRQEDFAASYQALM---DSSGTSYQSTNYM-MVDNGSEIFKTLHYLSSLIQSIKSPLG-TRDNPARICRDLMNCQQKMGDGTYWIDPNIGCSSDTIEVTCNFTEGGQTCLKPITKS--------------------KMEFEVGR-----------VQMNFLHLLSSEAMQSITFHCLNVPAWEKS--SKAVRFKAWS---GHIFGT------------EG--------------MFQPEVSVDGCKVQDGRWHQTVLIFRTQDPTQFPIVDVLNLPLPSPGM-TIHLEVGSVCF 1695 HSP 2 Score: 108.997 bits (271), Expect = 6.369e-23 Identity = 176/529 (33.27%), Postives = 207/529 (39.13%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG------------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G G +G G GI GK+G IGP+G +G RG PGP G G G SGP GE G G+ G G QGP G GE G +G G KG GP G G KGD+GPLG G +G G+ G G EG++GL G G +G G+PG G+ G EKGV+G G + G G PG+ GE G PG+ G+ G EG G G GD G G N GP+G G G G PGR G G G+PG G GPPG G G G G G GKA +G G G +G G+ GDRG PG G GQ GP GP RG G+ G PG G R L+G++GS GT+G G G+PG G G G G GP+G G G GP G DG
Sbjct: 918 GPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGI---PGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGE---------------------------------------------IGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKG---------------------------------EKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTG---------------------------------NQGPKGSRGTRGPVGSPGRMGAQGEPGMPG---------YQGHKGPPGPLGPPGIKGEKGEQGDDGKA--EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGP------------------------------RGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDG 1291 HSP 3 Score: 106.686 bits (265), Expect = 3.009e-22 Identity = 211/541 (39.00%), Postives = 255/541 (47.13%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPR---------------GQSGNPGPQGIRGARGQSGPTG---ELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV------GSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
GPPG GP G+ GKPG G G G G G G+ G PG G G +G++G TG ++G +G +G GP G TG GE+GD G G PGP G G +G G+PG G G G PG G G GVRG GR+G+ GP GP GE G G G +G++G +G +G +G G+ G+ G G G+SG G PG+ G+ G G G GP GA G IG GP GA G G PG G KGD G LG GEQGL G G G+EGE G+ GP G KGE IG PGP G G G +G G G G +G G G G PGK G +G G G++ GE G GD+GP G G G RG GP+G G G +G+PG G G G PGP G G+ G+ GE G G+ +G G+PG G V G G+PG PG GP+G RGN G +G G GP G
Sbjct: 762 GPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKGIT---------------------------------GNPGPAGAQGPVGALGEIGHKGP---QGAKGEPGPPGETGLKGDLGPLGIPGEQGL------------------------IGQRGDPGLEGESGLTGPDGMKGE---IGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGK--AEGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRG 1237 HSP 4 Score: 89.3521 bits (220), Expect = 5.442e-17 Identity = 156/514 (30.35%), Postives = 200/514 (38.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPT------------GDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTG------LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR 3973
G PG +G G PG+ G G EG +G G G +G +GN GP+G RG RG G G +G++G+ G G QG G+KGE+GD G +G G G +G VG G GE GD G G+ G +G RG G +G G +G L GS+G G+ G+PG PG++G + G G IG+ GP G GR G+ GP G G G +G PG+KG +GD G +G G G G GV G G QGPPG +GE G LPG +G G G+ G GL G G GT+G+ G+ G+ G PGIAG G +GP G +G +G+ G KG L G +G+ G +G VG G PGP G G QG
Sbjct: 1088 EGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGKA--------------------------------------EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAH---------------------------------GQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDGEIGLAGTLG---------------------------KRGNTGVPGLPGAQGPPGFRGERG---LPGEIGLPGKR------------------------GMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGF---------------------------KGIQGP------KGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDN 1443 HSP 5 Score: 85.1149 bits (209), Expect = 1.086e-15 Identity = 202/540 (37.41%), Postives = 234/540 (43.33%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGD---LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGD---IGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPG------------PVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RGP G+ G G PG+ G+ G G GPKG+ +GP G G PG G RG G G G +G G G FG +GP G G G G GP G G G +G G+VG G G KG G G++GLKG +G G G G G G +G QG+ G PG G GV G+ G++G G GP GP G G G PG G +G+KG G GP G PG G+ GP G GA G EG PG KG G G GP+GE G N+G G GE G+QG G GE G G G GT G G G PG PG G G G GSPG+ G G +G G G GE G G +GP GI G G GP G +G RG+ G G PG G KGI G+PG GA G G G G GPQG +G PGP GETGL G +GP+G GE
Sbjct: 572 RGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRGTMGRPGFPGDFGERGPPGLDGN---------------------------------PGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAG---------------------------NTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMG---------------------------ERGIPGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGE 1024 HSP 6 Score: 68.5514 bits (166), Expect = 1.134e-10 Identity = 199/542 (36.72%), Postives = 236/542 (43.54%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV------------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP------------GPPGLTGPQGK---RGNPGPKGETGLMGPIGPVGEDG 4039
GP G G PG+ + G KGD G G +G PGP +G +G GP G G G R GP+G G +G GR+G GPIG P G +G +GP G GL G GE G+ G GK G MG G G GE G PG G G G PGP G G GD+G +G G PG G G PG +G SG +G G+ +G KG G+ GP G +G G +G G KG G G PG +G G+ GP G G GI+G PG +G GP G PG G GP G GAPG G G+ G PG G +GP G +G G +G+ G++G G G +G+ G G G G G G PG G MG GNPGP GS G G G PG +G ++G KG G G G GEP G GL GPQGK RG PGP G G+ GP GP GE G
Sbjct: 515 HGPKGQKGDPGLSPGKAINGLKGDPGLPGLTGVPGPLSRKGQKGYPGPQGHPGEPGVR---GPEG---------------------------------------------------SPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRGTMGRPGFPGDFGERGPPGLDG---------------------NPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRK---------GYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKG 972 HSP 7 Score: 65.0846 bits (157), Expect = 1.433e-9 Identity = 196/582 (33.68%), Postives = 241/582 (41.41%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARG------------------------------QSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXX------XXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---------------------------PGPKGETGLMGPIGPVGEDGE 4042
+G PG G SGL G GI G G G G G +G G PGP G+RG G ++GP G G G RG GP+G G +G+ G G G G+ G GRKG G +G +G KG+ G G++G G +G G G G+TG+ G +G +G G PG PG+ G G G G GS GP GP G G G PG RG KG +G G GP G PG G GP +G G +G G +G G+ GI GP G G+ SGP G GE GI G PG G GP+G G +G G G G PG PG+ GL+G G G GE G G RG PG+ G G GP+G G +G G +G G G GP G G G RG++GK G+ G+KG+ KG KG G +G G G+ GP G GP+G RG PGP G G+ G G G+DG+
Sbjct: 686 KGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPG------------------------------------APGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGP---SGIQGKQGLIGPQGKMGERGIPGPNGFPGI---------------------------SGPSGPPGEKGITGNPGPAGAQGPVGALGEIG------------------HKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGK 1183 HSP 8 Score: 60.4622 bits (145), Expect = 3.318e-8 Identity = 109/260 (41.92%), Postives = 142/260 (54.62%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG 3256
RGP G G G PG PG G++G GP+G+ G +G G+ GP QG+RG++G G G+ G G+ G G G G G RG G QG GPAGP+G G GSPG KG +G G E G+ G LG++G+ G G G +G G G+ GL G G G +G EG GL G++G G G+PG PG+ G G G G +G G G G+QG G G G++G G +G++GP G PG +G+ G G G
Sbjct: 1194 RGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDG---------EIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPGKRGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDNG 1444 HSP 9 Score: 58.151 bits (139), Expect = 1.486e-7 Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG G++G G G+ G GQ G G G +GV G G +GP GP+GI G G G++GE +G DG G G++G G G PG+ G++GP G +G G
Sbjct: 1245 KGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGE---QGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERG 1342 HSP 10 Score: 58.151 bits (139), Expect = 1.715e-7 Identity = 176/566 (31.10%), Postives = 219/566 (38.69%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPG---------KPGIDGKEGSIGPK---------GDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTG---DKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA---------------------------------------------GPPGKTGASGAEG---QPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN 3979
G PG RG G PG PG+DG G +G GD+G G G PG +G++G G SG +G G KG +G G G G DKG +G PG G G G G G G G G G G PG GP GE G G+ G+ G+ G GP G+ G G G G G G G G +G G++G+ GP+G +G G G G E+G++G IG +G TG G G+ GP G+ GA G +G +PG+ GTKG +GI +G+QGL GPQG GE GI GP G G GP G PG G + G PG AG QGP G G G G +G +G PG G G +G GP+GI G +GL G+ G+PG +GE L G G G IG G +GE G G+ G +GK G
Sbjct: 624 GVPGKRGTMGRPGFPGDFGERGPPGLDGNPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIG---------------------------------EQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGI---QGKQGL---------------------------IGPQGKMGERGIPGPNGFPGISGPSGPPGEKGIT---------------------------GNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGI------------------------PGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGP 1075 HSP 11 Score: 56.225 bits (134), Expect = 6.437e-7 Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
K G++G G G G G + +G+ G G +G G G RGPEG G KG G QG GP G G KG+ G +GPPG G PG G RG G G+ G
Sbjct: 530 KAINGLKGDPGLPGLTGVPGPLSRKGQKGYPGPQGHPGEPGVRGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRG 630 HSP 12 Score: 55.4546 bits (132), Expect = 1.067e-6 Identity = 46/106 (43.40%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---PGYAGNPGIKGSRGPVGNQGRDGE 2134
Y G G G G G G G G RG G++G KG G++G G G +G G G G TGPRG G +G EG GP PG G+PG+K G QG DGE
Sbjct: 1211 YPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLK------GEQGDDGE 1310 HSP 13 Score: 55.0694 bits (131), Expect = 1.572e-6 Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G +G G G +G GP G++G RG G G G G GP G +GI G G G QG G G+ G+KG +G+ G PG G G+KG GP+G G G
Sbjct: 927 GTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQG 1026 HSP 14 Score: 54.6842 bits (130), Expect = 1.957e-6 Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
G G +G GAKG+ GP G+ G +G++G G+ GE +G+ G +GD G++GE+G G DG KG+ G GP G G G++G++G
Sbjct: 990 GEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGE---------QGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKG 1071 HSP 15 Score: 54.6842 bits (130), Expect = 2.129e-6 Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 2
Query: 1835 ARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G GA+G GP+G+ G G G G++G+ G+ GP+G G G+ G G G +GP G G K G GNPG G++GPVG G G K
Sbjct: 904 VRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEK---------GITGNPGPAGAQGPVGALGEIGHK 995 HSP 16 Score: 52.7582 bits (125), Expect = 7.531e-6 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query: 1847 RGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPR---GPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G+ GA GD GP G G RGE G G G+ G +GPR G +G+ G G G+QG G +G G KG G G G G PG G GP G GR G++
Sbjct: 1185 EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQE 1284 HSP 17 Score: 52.373 bits (124), Expect = 9.375e-6 Identity = 45/98 (45.92%), Postives = 54/98 (55.10%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+G G G SGAKG+ G GQ G GE+G G+ G + GP+GP G G KG G +G G GK+G G G VGP GNPG G RG G+ G
Sbjct: 1353 RGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLF---GPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGP---NGNPGPVGDRGSQGDNG 1444
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Match: ENSXETT00000032329.1 (collagen, type XXVII, alpha 1 [Source:NCBI gene;Acc:100490770]) HSP 1 Score: 156.762 bits (395), Expect = 1.606e-37 Identity = 286/898 (31.85%), Postives = 378/898 (42.09%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTG------------LKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASG-------------------------AEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEG------ELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM------GPIG---------PVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRT-PGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
PG GPSG PG+ GI G G G +G +G G+ G+ GPQG A+G+ GP GE G KGD G G G G G+RGDPG +G E G+ G G KG +G GP+GEKG+ G G G ++G G+ G +G +GK G GS+G +G GE G PGD G G +G KG G GP G+PGR+G G PG G G AEG PG G +G G G RGE G G G G +G RG G+QG G+SGP+G++G +G++G PG+ GE G G PG +G +GP G G G G +G G G GSPGL G+ G G G +GT G+ G G G PG G G RG G G +G G RG++G +G G KGE KG G PG +G G G GP G G G +G GPKG GLM GP+G PVG+ G G G GP GPPGP G G PG S + + SSG +ST VD +F + +++ I+ I+ P G +D+ AR C D+ +++ DG Y+IDPN G D+IEV C F+E +TC+ + + ++E + R QMNFL +S++ Q I F C + S S+ +FK + H F + EG +F + DGC + + T D + PI+D + G+ T+ L V S+CF
Sbjct: 959 PGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQG---AKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEG------------------------------------ESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTG------------------------------NQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGKAEGTPGAPGDRGPVGDGGDRGEPG---DPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPG---------------------KRGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDNGMPGPRGPPGPRGKPGPPGPSVILDSYRQEDFAASYQALM---DSSGTSYQSTNYM-MVDNGSEIFKTLHYLSSLIQSIKSPLG-TRDNPARICRDLMNCQQKMGDGTYWIDPNIGCSSDTIEVTCNFTEGGQTCLKPITKS--------------------KMEFEVGR-----------VQMNFLHLLSSEAMQSITFHCLNVPAWEKS--SKAVRFKAWS---GHIFGT------------EG--------------MFQPEVSVDGCKVQDGRWHQTVLIFRTQDPTQFPIVDVLNLPLPSPGM-TIHLEVGSVCF 1695 HSP 2 Score: 108.612 bits (270), Expect = 6.643e-23 Identity = 176/529 (33.27%), Postives = 207/529 (39.13%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG------------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G G +G G GI GK+G IGP+G +G RG PGP G G G SGP GE G G+ G G QGP G GE G +G G KG GP G G KGD+GPLG G +G G+ G G EG++GL G G +G G+PG G+ G EKGV+G G + G G PG+ GE G PG+ G+ G EG G G GD G G N GP+G G G G PGR G G G+PG G GPPG G G G G G GKA +G G G +G G+ GDRG PG G GQ GP GP RG G+ G PG G R L+G++GS GT+G G G+PG G G G G GP+G G G GP G DG
Sbjct: 918 GPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGI---PGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGE---------------------------------------------IGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKG---------------------------------EKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTG---------------------------------NQGPKGSRGTRGPVGSPGRMGAQGEPGMPG---------YQGHKGPPGPLGPPGIKGEKGEQGDDGKA--EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGP------------------------------RGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDG 1291 HSP 3 Score: 106.301 bits (264), Expect = 3.415e-22 Identity = 211/541 (39.00%), Postives = 255/541 (47.13%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPR---------------GQSGNPGPQGIRGARGQSGPTG---ELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV------GSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
GPPG GP G+ GKPG G G G G G G+ G PG G G +G++G TG ++G +G +G GP G TG GE+GD G G PGP G G +G G+PG G G G PG G G GVRG GR+G+ GP GP GE G G G +G++G +G +G +G G+ G+ G G G+SG G PG+ G+ G G G GP GA G IG GP GA G G PG G KGD G LG GEQGL G G G+EGE G+ GP G KGE IG PGP G G G +G G G G +G G G G PGK G +G G G++ GE G GD+GP G G G RG GP+G G G +G+PG G G G PGP G G+ G+ GE G G+ +G G+PG G V G G+PG PG GP+G RGN G +G G GP G
Sbjct: 762 GPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKGIT---------------------------------GNPGPAGAQGPVGALGEIGHKGP---QGAKGEPGPPGETGLKGDLGPLGIPGEQGL------------------------IGQRGDPGLEGESGLTGPDGMKGE---IGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGK--AEGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRG 1237 HSP 4 Score: 89.3521 bits (220), Expect = 5.971e-17 Identity = 156/514 (30.35%), Postives = 200/514 (38.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPT------------GDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTG------LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR 3973
G PG +G G PG+ G G EG +G G G +G +GN GP+G RG RG G G +G++G+ G G QG G+KGE+GD G +G G G +G VG G GE GD G G+ G +G RG G +G G +G L GS+G G+ G+PG PG++G + G G IG+ GP G GR G+ GP G G G +G PG+KG +GD G +G G G G GV G G QGPPG +GE G LPG +G G G+ G GL G G GT+G+ G+ G+ G PGIAG G +GP G +G +G+ G KG L G +G+ G +G VG G PGP G G QG
Sbjct: 1088 EGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGKA--------------------------------------EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAH---------------------------------GQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDGEIGLAGTLG---------------------------KRGNTGVPGLPGAQGPPGFRGERG---LPGEIGLPGKR------------------------GMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGF---------------------------KGIQGP------KGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDN 1443 HSP 5 Score: 85.1149 bits (209), Expect = 1.059e-15 Identity = 202/540 (37.41%), Postives = 234/540 (43.33%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGD---LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGD---IGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPG------------PVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RGP G+ G G PG+ G+ G G GPKG+ +GP G G PG G RG G G G +G G G FG +GP G G G G GP G G G +G G+VG G G KG G G++GLKG +G G G G G G +G QG+ G PG G GV G+ G++G G GP GP G G G PG G +G+KG G GP G PG G+ GP G GA G EG PG KG G G GP+GE G N+G G GE G+QG G GE G G G GT G G G PG PG G G G GSPG+ G G +G G G GE G G +GP GI G G GP G +G RG+ G G PG G KGI G+PG GA G G G G GPQG +G PGP GETGL G +GP+G GE
Sbjct: 572 RGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRGTMGRPGFPGDFGERGPPGLDGN---------------------------------PGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAG---------------------------NTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMG---------------------------ERGIPGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGE 1024 HSP 6 Score: 68.5514 bits (166), Expect = 1.213e-10 Identity = 199/542 (36.72%), Postives = 236/542 (43.54%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGV------------KGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP------------GPPGLTGPQGK---RGNPGPKGETGLMGPIGPVGEDG 4039
GP G G PG+ + G KGD G G +G PGP +G +G GP G G G R GP+G G +G GR+G GPIG P G +G +GP G GL G GE G+ G GK G MG G G GE G PG G G G PGP G G GD+G +G G PG G G PG +G SG +G G+ +G KG G+ GP G +G G +G G KG G G PG +G G+ GP G G GI+G PG +G GP G PG G GP G GAPG G G+ G PG G +GP G +G G +G+ G++G G G +G+ G G G G G G PG G MG GNPGP GS G G G PG +G ++G KG G G G GEP G GL GPQGK RG PGP G G+ GP GP GE G
Sbjct: 515 HGPKGQKGDPGLSPGKAINGLKGDPGLPGLTGVPGPLSRKGQKGYPGPQGHPGEPGVR---GPEG---------------------------------------------------SPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRGTMGRPGFPGDFGERGPPGLDG---------------------NPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRK---------GYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKG 972 HSP 7 Score: 64.6994 bits (156), Expect = 1.626e-9 Identity = 196/582 (33.68%), Postives = 241/582 (41.41%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARG------------------------------QSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXX------XXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---------------------------PGPKGETGLMGPIGPVGEDGE 4042
+G PG G SGL G GI G G G G G +G G PGP G+RG G ++GP G G G RG GP+G G +G+ G G G G+ G GRKG G +G +G KG+ G G++G G +G G G G+TG+ G +G +G G PG PG+ G G G G GS GP GP G G G PG RG KG +G G GP G PG G GP +G G +G G +G G+ GI GP G G+ SGP G GE GI G PG G GP+G G +G G G G PG PG+ GL+G G G GE G G RG PG+ G G GP+G G +G G +G G G GP G G G RG++GK G+ G+KG+ KG KG G +G G G+ GP G GP+G RG PGP G G+ G G G+DG+
Sbjct: 686 KGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPG------------------------------------APGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGP---SGIQGKQGLIGPQGKMGERGIPGPNGFPGI---------------------------SGPSGPPGEKGITGNPGPAGAQGPVGALGEIG------------------HKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGHKGPPGPLGPPGIKGEKGEQGDDGK 1183 HSP 8 Score: 60.4622 bits (145), Expect = 3.610e-8 Identity = 109/260 (41.92%), Postives = 142/260 (54.62%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG 3256
RGP G G G PG PG G++G GP+G+ G +G G+ GP QG+RG++G G G+ G G+ G G G G G RG G QG GPAGP+G G GSPG KG +G G E G+ G LG++G+ G G G +G G G+ GL G G G +G EG GL G++G G G+PG PG+ G G G G +G G G G+QG G G G++G G +G++GP G PG +G+ G G G
Sbjct: 1194 RGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDG---------EIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPGKRGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGPNGNPGPVGDRGSQGDNG 1444 HSP 9 Score: 58.5362 bits (140), Expect = 1.449e-7 Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG G++G G G+ G GQ G G G +GV G G +GP GP+GI G G G++GE +G DG G G++G G G PG+ G++GP G +G G
Sbjct: 1245 KGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGE---QGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERG 1342 HSP 10 Score: 57.7658 bits (138), Expect = 1.979e-7 Identity = 176/566 (31.10%), Postives = 219/566 (38.69%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPG---------KPGIDGKEGSIGPK---------GDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTG---DKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA---------------------------------------------GPPGKTGASGAEG---QPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN 3979
G PG RG G PG PG+DG G +G GD+G G G PG +G++G G SG +G G KG +G G G G DKG +G PG G G G G G G G G G G PG GP GE G G+ G+ G+ G GP G+ G G G G G G G G +G G++G+ GP+G +G G G G E+G++G IG +G TG G G+ GP G+ GA G +G +PG+ GTKG +GI +G+QGL GPQG GE GI GP G G GP G PG G + G PG AG QGP G G G G +G +G PG G G +G GP+GI G +GL G+ G+PG +GE L G G G IG G +GE G G+ G +GK G
Sbjct: 624 GVPGKRGTMGRPGFPGDFGERGPPGLDGNPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGLPGNSGESGLKGDKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIG---------------------------------EQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGI---QGKQGL---------------------------IGPQGKMGERGIPGPNGFPGISGPSGPPGEKGIT---------------------------GNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGI------------------------PGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGP 1075 HSP 11 Score: 56.225 bits (134), Expect = 5.917e-7 Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
K G++G G G G G + +G+ G G +G G G RGPEG G KG G QG GP G G KG+ G +GPPG G PG G RG G G+ G
Sbjct: 530 KAINGLKGDPGLPGLTGVPGPLSRKGQKGYPGPQGHPGEPGVRGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGLPGVPGKRG 630 HSP 12 Score: 55.4546 bits (132), Expect = 1.040e-6 Identity = 46/106 (43.40%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---PGYAGNPGIKGSRGPVGNQGRDGE 2134
Y G G G G G G G G RG G++G KG G++G G G +G G G G TGPRG G +G EG GP PG G+PG+K G QG DGE
Sbjct: 1211 YPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPGKDGSPGLK------GEQGDDGE 1310 HSP 13 Score: 55.0694 bits (131), Expect = 1.470e-6 Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G +G G G +G GP G++G RG G G G G GP G +GI G G G QG G G+ G+KG +G+ G PG G G+KG GP+G G G
Sbjct: 927 GTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEKGITGNPGPAGAQGPVGALGEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGEQG 1026 HSP 14 Score: 54.6842 bits (130), Expect = 1.845e-6 Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
G G +G GAKG+ GP G+ G +G++G G+ GE +G+ G +GD G++GE+G G DG KG+ G GP G G G++G++G
Sbjct: 990 GEIGHKGPQGAKGEPGPPGETGLKGDLGPLGIPGE---------QGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKG 1071 HSP 15 Score: 54.6842 bits (130), Expect = 1.974e-6 Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 2
Query: 1835 ARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G GA+G GP+G+ G G G G++G+ G+ GP+G G G+ G G G +GP G G K G GNPG G++GPVG G G K
Sbjct: 904 VRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGISGPSGPPGEK---------GITGNPGPAGAQGPVGALGEIGHK 995 HSP 16 Score: 52.7582 bits (125), Expect = 7.282e-6 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query: 1847 RGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPR---GPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G+ GA GD GP G G RGE G G G+ G +GPR G +G+ G G G+QG G +G G KG G G G G PG G GP G GR G++
Sbjct: 1185 EGTPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQE 1284 HSP 17 Score: 52.373 bits (124), Expect = 8.838e-6 Identity = 45/98 (45.92%), Postives = 54/98 (55.10%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+G G G SGAKG+ G GQ G GE+G G+ G + GP+GP G G KG G +G G GK+G G G VGP GNPG G RG G+ G
Sbjct: 1353 RGMEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLF---GPKGPPGDVGFKGIQGPKGPLGLMGKEGAGGPMGIVGP---NGNPGPVGDRGSQGDNG 1444
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Match: COL5A1 (collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]) HSP 1 Score: 147.902 bits (372), Expect = 6.949e-35 Identity = 271/924 (29.33%), Postives = 371/924 (40.15%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARG---QSGPTGELG---------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPV----------------GTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQG---------------EAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPG------PP----------------GLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDA------------LFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
GP G+ GPSGL G+ G G +G GP+G GP G+ G G G GARG Q+GP G+ G KG RG GPQGP G G RG G+ G +GP GP GE G GP G+ G G G +G G +GK G V G PG PG G + E V G G GP G + G GP G+ G GA G+PG KG G+TG +G RG GP G G +G G G++GS G+ GP G+ G+ GPPG +G G GLPGP+ G G +G G G PG G G GP G G PG+ G QGPAG G QG E G++G+ G PG GN G +G GP G PGP GP+G G G G G G+ G GQKG+ +G G PG +G + + +P PP GL GP G++G KG+ GL GP GP G GE + + I+ P SS R +RS A VD +A +F ++ + +I++++ P G N+ + ARTC D+ L + DG+Y+IDPN+G +DS +V C F+ ++CI K+ G P + +W + + G + D + + QM F++ ++ Q I + C QSV + D+ N + A + G D+ + D P + DGC + + +L+T+ + PI+D ND+ + + G V +CF
Sbjct: 524 GPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSV-----------------------------------------GIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGKLG---------VPGLPGYPGRQG--------------------PKVTLSSSLIKPPENSVPGTPGKPGPRG---QRGPTGPRGERGPRGATGKPGPKGPTGETGPMGERGHP------GPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGK---DGPPGLRGFTGERGLPGPICFSSLLKTLFSFQGSPGERGAAGPAGPIGLPGRPGPQGPPGPAGEKGTPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGNRGDKG---------EQGPPGPPGPQGPIGQPGPSGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNIANVSKPTYIYISTPPLCCHRGHVLLELSCLIGLIGPPGEQGE---KGDRGLPGPQGPHGAKGEQVCIFSSHKETSLNDGEHQSPNFEGPPGEV-----------IQPLPIHSSKRTRRSIDASQVVDDGNADNYMDYADGMEEIFGSLNSLKQEIEQMKHPLG-NQQNPARTCKDLLLCHPELPDGEYWIDPNQGCSRDSFKVFCNFTAGGESCIFPDKKSEGARITSWPKENPGSWFSEFK-RGKLLSYVDSNGNPIGVVQMTFMKLLSASVKQNITYNCYQSVAWHDATT---NSYDKAIRFL-------------------GSNDEEMSYDN--NPSIRAIM--DGCASKKGYQKTVLELDTSKVEQAPIVDIMFNDFGDP-VQKFGFEVGPVCF 1313 HSP 2 Score: 107.457 bits (267), Expect = 1.419e-22 Identity = 62/222 (27.93%), Postives = 100/222 (45.05%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTS-------FMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
DLL A++ + G FC + AFR L A ++ LF FP++FS+L T K + + SI N+ + + +T G + Y D F N+ +L+DG+WHR+AFSV K +++L +DC ++ L R+ P+ + G + + F G + L++V A A C+ Y PDC+ D +Q P
Sbjct: 36 ADLLKALEFHNLPDGIKKTTGFCAYRKSSDGPDVAFRVSKEAQLSAPTNQLFSDVAFPEDFSLLATVKPKKGSHSYLLSIYNEQGTLQIGLTLGWEPMFVYEDHQGHPPPEDYPIFRNI----NLSDGKWHRVAFSVHKKTITLFLDCVKKATLPLKRSDGPIIDTNGIVVFGTRILDEQVFEGDIQQLMIVPDARAAHDYCEHYTPDCDTAIPDAPQSQDP 253 HSP 3 Score: 77.7962 bits (190), Expect = 1.589e-13 Identity = 181/559 (32.38%), Postives = 222/559 (39.71%), Query Frame = 2
Query: 2498 GTRGPSGLPGKP---------GIDGKEGSIGPKGDLGPRGQSGNPGP------------QGIRGARGQSGPTGEL---------GSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAG------------GSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKG---------IKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G GP GL G+P G+ G+ G +GP+ GPRG G+PGP G RG GQ+GP G+ G KG RG GPQGP G G RG G+ G +GP GP GE G GP G+ G G G +G G +GK GV G PG PG G + E V G G GP G+ G GP G+ G GA G+PG KG G+TG +G RG GP G G +G G G++GS G+ GP G+ G+ GPPG +G G GLPGP+ S + G PG+ G GPAG G GE G G++GP G AG G +GP +G GP G GP G G G++GEPGQKG R KG +G G G GS GEPGP G G G++G+ GP+G G GP+G
Sbjct: 512 GPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQ---GPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSV-----------------------------------------GIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGKL---------GVPGLPGYPGRQG--------------------PKVTLSSSLIKPPENSVPGTPGKPGPR---GQRGPTGPRGERGPRGATGKPGPKGPTGETGPMGERGHP------GPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGK---DGPPGLRGFTGERGLPGPICFSSLLKTLFSFQ-----------------GSPGERGAAGPAGPIGLPGRPGPQGPPGPAGEKGTPGEKGPQGPAGRDGIQGP------------------VGLPGPAGPVGPPGEDGDKGEIGEPGQKGNRGDKGEQGPPGPPGPQGPIGQPGPSGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVG 950 HSP 4 Score: 66.6254 bits (161), Expect = 4.447e-10 Identity = 132/410 (32.20%), Postives = 152/410 (37.07%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGT-------KGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGP----------------KGETGLMGPIGPV 4027
R GP GP G G GPLG G G +GE G G +G G GS GP G G G G G G G+ G KGD G G G PG G GP G G G G GVK G+ G GPRGE G + GP+ G GE+G GP G KG+LG GLPG G GP + PG PGK G +G G +G +GE G RG G PG G G+ GP G RG G G PG++G + G +GS G G G G+ GPPGL G G+RG PGP GE G GP GP+
Sbjct: 506 ARLALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGAR---------------------------GMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPE---------------------------GPKGRGGPSGEIGPLGPGGEKGKLGVPGLPGYPGRQGPKVTLSSSLIKPPENSV--------PGTPGKPGPRGQRGPTGPRGERGPRGATGKPGPKGPTGETGPMG------------------------------ERGHPGPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGKDGPPGLRGFTGERGLPGPICFSSLLKTLFSFQGSPGERGAAGPAGPI 823 HSP 5 Score: 55.4546 bits (132), Expect = 9.381e-7 Identity = 44/97 (45.36%), Postives = 52/97 (53.61%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGET---GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+RG SG G G G +G+ G G+KG G+ G QGPRGP+G G G G +G G RG G G +G G G G PG KG RGP G QG
Sbjct: 509 ALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQG 605 HSP 6 Score: 55.0694 bits (131), Expect = 1.293e-6 Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 2
Query: 974 GRDGLPGTPGVPGAPGHIFVLPI--------PDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNK 1372
GR GLPG G+PG PG + +LP + + +Q + +++ L+G GP G+TG PG G G G+KG+ G G G GP+G G G PG GR+G+DG RG G TGPKG G G+ GLPG K
Sbjct: 455 GRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPQVSAQESQAQAILQQARLALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEK 595
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Match: COL5A1 (collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]) HSP 1 Score: 147.517 bits (371), Expect = 8.428e-35 Identity = 271/924 (29.33%), Postives = 371/924 (40.15%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARG---QSGPTGELG---------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPV----------------GTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQG---------------EAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPG------PP----------------GLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDA------------LFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
GP G+ GPSGL G+ G G +G GP+G GP G+ G G G GARG Q+GP G+ G KG RG GPQGP G G RG G+ G +GP GP GE G GP G+ G G G +G G +GK G V G PG PG G + E V G G GP G + G GP G+ G GA G+PG KG G+TG +G RG GP G G +G G G++GS G+ GP G+ G+ GPPG +G G GLPGP+ G G +G G G PG G G GP G G PG+ G QGPAG G QG E G++G+ G PG GN G +G GP G PGP GP+G G G G G G+ G GQKG+ +G G PG +G + + +P PP GL GP G++G KG+ GL GP GP G GE + + I+ P SS R +RS A VD +A +F ++ + +I++++ P G N+ + ARTC D+ L + DG+Y+IDPN+G +DS +V C F+ ++CI K+ G P + +W + + G + D + + QM F++ ++ Q I + C QSV + D+ N + A + G D+ + D P + DGC + + +L+T+ + PI+D ND+ + + G V +CF
Sbjct: 521 GPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSV-----------------------------------------GIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGKLG---------VPGLPGYPGRQGPKVTLSSSLIKPP--------------------ENSVPGTPGKPGPRG---QRGPTGPRGERGPRGATGKPGPKGPTGETGPMGERGHP------GPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGK---DGPPGLRGFTGERGLPGPICFSSLLKTLFSFQGSPGERGAAGPAGPIGLPGRPGPQGPPGPAGEKGTPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGNRGDKG---------EQGPPGPPGPQGPIGQPGPSGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNIANVSKPTYIYISTPPLCCHRGHVLLELSCLIGLIGPPGEQGE---KGDRGLPGPQGPHGAKGEQVCIFSSHKETSLNDGEHQSPNFEGPPGEV-----------IQPLPIHSSKRTRRSIDASQVVDDGNADNYMDYADGMEEIFGSLNSLKQEIEQMKHPLG-NQQNPARTCKDLLLCHPELPDGEYWIDPNQGCSRDSFKVFCNFTAGGESCIFPDKKSEGARITSWPKENPGSWFSEFK-RGKLLSYVDSNGNPIGVVQMTFMKLLSASVKQNITYNCYQSVAWHDATT---NSYDKAIRFL-------------------GSNDEEMSYDN--NPSIRAIM--DGCASKKGYQKTVLELDTSKVEQAPIVDIMFNDFGDP-VQKFGFEVGPVCF 1310 HSP 2 Score: 108.227 bits (269), Expect = 8.040e-23 Identity = 62/222 (27.93%), Postives = 100/222 (45.05%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTS-------FMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
DLL A++ + G FC + AFR L A ++ LF FP++FS+L T K + + SI N+ + + +T G + Y D F N+ +L+DG+WHR+AFSV K +++L +DC ++ L R+ P+ + G + + F G + L++V A A C+ Y PDC+ D +Q P
Sbjct: 33 ADLLKALEFHNLPDGIKKTTGFCAYRKSSDGPDVAFRVSKEAQLSAPTNQLFSDVAFPEDFSLLATVKPKKGSHSYLLSIYNEQGTLQIGLTLGWEPMFVYEDHQGHPPPEDYPIFRNI----NLSDGKWHRVAFSVHKKTITLFLDCVKKATLPLKRSDGPIIDTNGIVVFGTRILDEQVFEGDIQQLMIVPDARAAHDYCEHYTPDCDTAIPDAPQSQDP 250 HSP 3 Score: 76.2554 bits (186), Expect = 4.338e-13 Identity = 181/559 (32.38%), Postives = 222/559 (39.71%), Query Frame = 2
Query: 2498 GTRGPSGLPGKP---------GIDGKEGSIGPKGDLGPRGQSGNPGP------------QGIRGARGQSGPTGEL---------GSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAG------------GSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKG---------IKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G GP GL G+P G+ G+ G +GP+ GPRG G+PGP G RG GQ+GP G+ G KG RG GPQGP G G RG G+ G +GP GP GE G GP G+ G G G +G G +GK GV G PG PG G + E V G G GP G+ G GP G+ G GA G+PG KG G+TG +G RG GP G G +G G G++GS G+ GP G+ G+ GPPG +G G GLPGP+ S + G PG+ G GPAG G GE G G++GP G AG G +GP +G GP G GP G G G++GEPGQKG R KG +G G G GS GEPGP G G G++G+ GP+G G GP+G
Sbjct: 509 GPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQ---GPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSV-----------------------------------------GIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGKL---------GVPGLPGYPGRQG--------------------PKVTLSSSLIKPPENSVPGTPGKPGPR---GQRGPTGPRGERGPRGATGKPGPKGPTGETGPMGERGHP------GPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGK---DGPPGLRGFTGERGLPGPICFSSLLKTLFSFQ-----------------GSPGERGAAGPAGPIGLPGRPGPQGPPGPAGEKGTPGEKGPQGPAGRDGIQGP------------------VGLPGPAGPVGPPGEDGDKGEIGEPGQKGNRGDKGEQGPPGPPGPQGPIGQPGPSGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVG 947 HSP 4 Score: 65.4698 bits (158), Expect = 8.806e-10 Identity = 132/410 (32.20%), Postives = 152/410 (37.07%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGT-------KGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGP----------------KGETGLMGPIGPV 4027
R GP GP G G GPLG G G +GE G G +G G GS GP G G G G G G G+ G KGD G G G PG G GP G G G G GVK G+ G GPRGE G + GP+ G GE+G GP G KG+LG GLPG G GP + PG PGK G +G G +G +GE G RG G PG G G+ GP G RG G G PG++G + G +GS G G G G+ GPPGL G G+RG PGP GE G GP GP+
Sbjct: 503 ARLALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGAR---------------------------GMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPE---------------------------GPKGRGGPSGEIGPLGPGGEKGKLGVPGLPGYPGRQGPKVTLSSSLIKPPENSV--------PGTPGKPGPRGQRGPTGPRGERGPRGATGKPGPKGPTGETGPMG------------------------------ERGHPGPPGPPGEQGLPGVAGKEGSKGDPGPAGLPGKDGPPGLRGFTGERGLPGPICFSSLLKTLFSFQGSPGERGAAGPAGPI 820 HSP 5 Score: 55.4546 bits (132), Expect = 1.003e-6 Identity = 44/97 (45.36%), Postives = 52/97 (53.61%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGET---GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+RG SG G G G +G+ G G+KG G+ G QGPRGP+G G G G +G G RG G G +G G G G PG KG RGP G QG
Sbjct: 506 ALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQG 602 HSP 6 Score: 55.4546 bits (132), Expect = 1.158e-6 Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 2
Query: 974 GRDGLPGTPGVPGAPGHIFVLPI--------PDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNK 1372
GR GLPG G+PG PG + +LP + + +Q + +++ L+G GP G+TG PG G G G+KG+ G G G GP+G G G PG GR+G+DG RG G TGPKG G G+ GLPG K
Sbjct: 452 GRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPQVSAQESQAQAILQQARLALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEK 592
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Match: COL5A1 (collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]) HSP 1 Score: 146.747 bits (369), Expect = 1.060e-34 Identity = 218/772 (28.24%), Postives = 299/772 (38.73%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR-------IGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIA-----------------GNMGQRGPNGPI------------------GIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDA------------LFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G GL G G +GP GP G +G GPLGK G +G G G +G G+TG G RG G+ G PG G G G +G IG GP G R GE GPPG G G EG G G G+ G LGP GE+G + GP G+ G+ GPPG +G G GLPGP+G GP G G G G G G GPVG PG G G G G G QG G++GD GP G A G G GP G GI GP G GL G +G PG++GE+ G +G PGP G G +G++G GPKGE+G+ GP GP G GE I+ P SS R +RS A VD +A +F ++ + +I++++ P G N+ + ARTC D+ L + DG+Y+IDPN+G +DS +V C F+ ++CI K+ G P + +W + + G + D + + QM F++ ++ Q I + C QSV + D + N + A + G D+ + D P + DGC + + +L+T+ + PI+D ND+ + + G V +CF
Sbjct: 410 GPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRG---------------------------------PAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKG---------------------------DPGPAGLPGK---DGPPGLRGFTGERGLPGPIGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNIANGESGLEGPPGKTGPIGPQGPPGKPGPEGLRGIPGPVVSSSLKSYDCLSSDPQCVKGYGHPGLIGLIGPPGEQGEK---------------GDRGLPGPQGPHGAKGEQGPTGPKGESGIPGPPGPPGPPGEV----------------------------------------IQPLPIHSSKRTRRSIDASQVVDDGNADNYMDYADGMEEIFGSLNSLKQEIEQMKHPLG-NQQNPARTCKDLLLCHPELPDGEYWIDPNQGCSRDSFKVFCNFTAGGESCIFPDKKSEGARITSWPKENPGSWFSEFK-RGKLLSYVDSNGNPIGVVQMTFMKLLSASVKQNITYNCYQSVAWHD---ATTNSYDKAIRFL-------------------GSNDEEMSYDN--NPSIRAIM--DGCASKKGYQKTVLELDTSKVEQAPIVDIMFNDFGDP-VQKFGFEVGPVCF 1034 HSP 2 Score: 106.686 bits (265), Expect = 2.480e-22 Identity = 62/222 (27.93%), Postives = 100/222 (45.05%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTS-------FMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
DLL A++ + G FC + AFR L A ++ LF FP++FS+L T K + + SI N+ + + +T G + Y D F N+ +L+DG+WHR+AFSV K +++L +DC ++ L R+ P+ + G + + F G + L++V A A C+ Y PDC+ D +Q P
Sbjct: 36 ADLLKALEFHNLPDGIKKTTGFCAYRKSSDGPDVAFRVSKEAQLSAPTNQLFSDVAFPEDFSLLATVKPKKGSHSYLLSIYNEQGTLQIGLTLGWEPMFVYEDHQGHPPPEDYPIFRNI----NLSDGKWHRVAFSVHKKTITLFLDCVKKATLPLKRSDGPIIDTNGIVVFGTRILDEQVFEGDIQQLMIVPDARAAHDYCEHYTPDCDTAIPDAPQSQDP 253 HSP 3 Score: 72.4034 bits (176), Expect = 7.229e-12 Identity = 157/440 (35.68%), Postives = 181/440 (41.14%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGP-------------LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPI------------GLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
G GP GL G+PG G G G KG+ G G G GPQG G G+ G G GS G RG G GP GD+G G+ GL G KG GP GP G G GP G+ G G RGE G +G +G+ G G GP G GE G PG AG+ G G PG G GE+G+ G IG GP G GR G GP G G +G G PG G KG G GPRG+QGL G G G +G G G G Q N GE G++GPPG+ G +GP G+PGPV +S D P G PG GL GP G QGE G+RG GP G G G++GP GP G
Sbjct: 392 GPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRG---------------------------------------------FDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGDPGPAGL------------------PGKDGPPGLRGFTGERGLPGPIGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNI----ANGESGLEGPPGKTGPIGPQGPPGKPGPEGLRGIPGPVVSSSLKSYDCLSSDPQCVKGY---------GHPGLIGLIGPP---GEQGEKGDRGLPGPQGPHGAKGEQGPTGPKG 752 HSP 4 Score: 70.4774 bits (171), Expect = 2.573e-11 Identity = 130/383 (33.94%), Postives = 156/383 (40.73%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARG---QSGPTGELG---------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG-----ASGAEGQPGVKGTKGDT------------------GILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGE-----LGIQGPPGRKGELGPIGLPGPVG 3517
GP G+ GPSGL G+ G G +G GP+G GP G+ G G G GARG Q+GP G+ G KG RG GPQGP G G RG +G +G G G +GP+GP GEKGD GP G G G G G G G G +G +GPQG +G G G G+ GP GPVG G G G GE G +G GL G G G G AGPPG G + A G+ G++G G T GI GP L + +S PQ V+G +G+ GPPG +GE G GLPGP G
Sbjct: 404 GPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDG-----------------PEGPKGRGGPSGEIGPLGPGGEKGDPGPAGLPGKDGPPGLRGFTGERGLPGPIGEKGPQGPAGRDGIQGPVGLP------------GPAGPVGPPGEDGDKGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNIANGESGLEGPPGKTGPIGPQGPPGKPGPEGLRGIPGPVVSSSL--------------------KSYDCLSSDPQCVKGYGHPGLIGLIGPPGEQGEKGDRGLPGPQG 737 HSP 5 Score: 57.3806 bits (137), Expect = 2.761e-7 Identity = 104/324 (32.10%), Postives = 126/324 (38.89%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGI----------DGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG------------------EKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV--------SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVK---GTKGDTGILGPRGEQGL 3340
RGP G +GP G PG G+ G+ G GP+G+ GP G G GP G G G G G+ G G GK GP G G GER G+ G +G KG GP G DG E GD G G+ G +G +G G KG EG G G GP G+ +GE G G G G G QG G GP G G+ G + + D + G PG IG GPPG+ G G G PG + G KG+ G GP+GE G+
Sbjct: 478 RGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGDPGPAGLPGKDGPPGLRGFTGER---------------------------------------------GLPGPIGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGSDGEPGPRGQQGLFGQKGDEGPRGFAGPPGPVGLQVMPTNIANGESGLEGPPGKTGPIGPQGPPGKPGPEGLRGIPGPVVSSSLKSYDCLSSDPQCVKGYGHPGLIGLIGPPGEQGEKGDRGLPGPQGPHGAKGEQGPTGPKGESGI 756 HSP 6 Score: 56.6102 bits (135), Expect = 5.119e-7 Identity = 50/113 (44.25%), Postives = 57/113 (50.44%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVK----------GEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G+ G G KG GP+G G G G +GVK GE G GPRG +G G KG G GE GP G G KGD G G PG G PG++G G G G GEK
Sbjct: 463 RGFDGLGGLPGEKGHRGPAGPQGPIGYPGPRGVKVRSVGIFLFHGEIGPPGPRGEDGPEGPKGRGGPSGEIGPLGPGGEKGDPGPAGLPGKDGPPGLRGFTGERGLPGPIGEK 575 HSP 7 Score: 55.4546 bits (132), Expect = 9.330e-7 Identity = 44/97 (45.36%), Postives = 52/97 (53.61%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGET---GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+RG SG G G G +G+ G G+KG G+ G QGPRGP+G G G G +G G RG G G +G G G G PG KG RGP G QG
Sbjct: 389 ALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEKGHRGPAGPQG 485 HSP 8 Score: 55.0694 bits (131), Expect = 1.309e-6 Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 2
Query: 974 GRDGLPGTPGVPGAPGHIFVLPI--------PDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNK 1372
GR GLPG G+PG PG + +LP + + +Q + +++ L+G GP G+TG PG G G G+KG+ G G G GP+G G G PG GR+G+DG RG G TGPKG G G+ GLPG K
Sbjct: 335 GRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPQVSAQESQAQAILQQARLALRGPSGPMGLTGRPGPLGSPGPSGLKGESGDLGPQGPRGPQGSPGPLGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLGGLPGEK 475
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Match: Col27a1 (collagen, type XXVII, alpha 1 [Source:MGI Symbol;Acc:MGI:2672118]) HSP 1 Score: 139.043 bits (349), Expect = 3.086e-32 Identity = 286/771 (37.09%), Postives = 369/771 (47.86%), Query Frame = 2
Query: 2543 GKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKG------------DVGPLGKTGLKGTRG------EVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXX-NSGPQGVEGELGIQGPPGRKGELG---PIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGT------------QGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG---------PVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIY----GDSELSEENKFK 4714
G G G KG GPRG G G QG +G +G+ GP G G G +G G +G +G KG G PG GPPG G G G G G G G +G GP G +GE G+ G G KG +GP+GP GE+G D GP+G GLKG RG E G KG EG G GS GP G++G PG G G GEKG++G +G++G G +G GIPG+PGP G G KG G +GPTGAPGR+G G PG G +G +G + G G G G +G+QG DG G + G G EG G++G PG++G+ G P G PGP G+ G G G PG G SG+ G G G PG G G QGP G +G+ QG+ G GD GP G AG G G G G GP G +G+ G G +GP G G +G GL G GEPG KG+ G G PG G G KG PG G G QG RG PG G+ G++GP G P G+ G G G GP GPPGP G G PG + + +G+ S Q +D +F + ++N I+ I+ P G K++ AR C D+ ++ DG Y++DPN G D+IEV C F++ +TC+ + + + E A+SR QMNFL +S+ Q I C ++ G S + +F+
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKG---ITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAFQTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLG-TKENPARVCRDLMDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPI--------------------TASKAEFAVSR-----------VQMNFLHLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFR 1774 HSP 2 Score: 91.6633 bits (226), Expect = 7.623e-18 Identity = 229/579 (39.55%), Postives = 279/579 (48.19%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDG---KEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGEL------------GSKGDRG------------KFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK------------GDVGPLGKTGLKGTR------GEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLD-XXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGE---LGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGT------------QGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RG PG RG G G G DG ++GS G KG +GPRG+ G PG QG G RG SG G L G G+ G + GP+GP G GE G+ G G KG +GP+GP GE+ GD GP+G GLKG R GE G KG EG G GS GP G++G PG G G GEKG++G +G++G G +G GIPG+PGP G G KG G +GPTGAPGR+G G PG G +G + G+ G G G G +G+QG D GP G G +G G G +G G+ G G EG G++G PG++G+ GP G PGP G+ G G G PG G SG+ G G G PG G G QGP G +G+ QG+ G GD GP G AG G G G G GP G +G+ G G +GP G G +G GL G GEPG KG+ G G PG G G KG PG G G QG RG PG G+ G++GP G +G G
Sbjct: 1038 RGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGE---------------------------------------------PGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK---GITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSG 1568 HSP 3 Score: 80.1073 bits (196), Expect = 3.123e-14 Identity = 201/620 (32.42%), Postives = 245/620 (39.52%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPG---IDGKEGSIGPKGDL------------GPRGQSGNPGPQGIRGARGQSG------PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---------KGDVGPLGKTGLKGTRGEVGIKGSEGKTGL---------------------------------MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXS---PGLPGKAGLQGPAGGSGTQGEAG-------------------------------------ERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG GP G+ GKPG + G G +GP+GD G G+ G PG G+ G++G+ G P GE G G G G G G+KG+RG G G PGP G G G G G+ G G G PG +G+ G+ G KG GP GPDG KG VGP G+ G G +G G +G G G MG +GP G GEPG PGD+ G+KGD+G +GP G G IG+ G PG G G G G+KG +GD G G GE+G + G +G G+ GP G+ G G +G PG++GE G G G G G G+ G PG PG G G G G+ G PG+ G QG G +G G G +RGDRG PG G GQ G G RG G+ G+PG G R G KGS G G G G+ GP G G QG +G PGP+G G GP G G DG
Sbjct: 901 GPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPG------SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDS------------------------------------GMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQE------------------GLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG------------------------------LRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDG 1430 HSP 4 Score: 71.2478 bits (173), Expect = 1.368e-11 Identity = 114/338 (33.73%), Postives = 143/338 (42.31%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
RG G PG PG G+EG G +G+ G +GQ G+PGP RG+ GP G G +G +GK G GP+G +G +G++GL G +G VG GP+G G G G+ G G +G+ G G G G G RG GV+G PG+ G G KG+ GL G G PG+ G G TG G +G+PG KG GD+G +G G GL G KG G G +G G GP G+ G+ GI GPPG LGP GLPGP G
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGP------RGRPGPKGSKGEEGPKGKPGKAGPSGRRG---------------------------------------------TQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPP------------------------------------GFKGESGLPGQLGPPGKRGTE---GGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGL---------FGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGM---LGPSGLPGPKG 1574 HSP 5 Score: 70.8626 bits (172), Expect = 1.633e-11 Identity = 213/568 (37.50%), Postives = 254/568 (44.72%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ------GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASG------------AEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPP---GRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR------------GPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXX---------XXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK---GIKGSPGTIGAVGSKGEPGPPGLTGP------QGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GP G PG G G++G GP GD GP+G G G G+ G G G G G G RG+ G G GD GERG PG G PG G G GV GL+G G++GP+G P G KG +G +G+ GLKG +GE G+ G G G G +G G G+PG G AG G +G G PG G G+ G GD G G G PG G GPPG+ G G EGQPG KG G G+ G +GE G G G G QG+ G +G+ G P G KG+ G +G PG G G G G PG G G+ G GP GS GLPG G +G G G G AGE+G + G PG G G+RG +G G +G GP G PG GP GP+G PG G +G G VGEPG G+ +K G G PG G +G +GEPG G GP +G RG+PGP GE G G G GEDG
Sbjct: 709 GQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG---------------------------PPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAG---------------DKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPG---------------------DPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDG 1213 HSP 6 Score: 70.8626 bits (172), Expect = 1.807e-11 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G+ G SG KGD GP G G +G +G +G G G GP GP+G+ G +GD G GE G +G++G KG++GS GPPG G PG +G G G +G+ G K
Sbjct: 1141 GEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAK 1242 HSP 7 Score: 68.1662 bits (165), Expect = 1.243e-10 Identity = 187/514 (36.38%), Postives = 225/514 (43.77%), Query Frame = 2
Query: 2525 GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVE------------GELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXX---------XXXXXXXXXXXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
G PG+ + G KG++G G SGNPGP G +G +G G G G++G+ GP+G G +G GR+G GP+G D GP G G G G G+ GS+G+ GL G G +G G PG PGD G G G G G G G G +GLIG TGA G +G GP G G G G+PG+KG KG+ G+ G G+ G G G G GL GGRGKPG G G+ G G G G GP G KG+ G GLPGP G GP G +G GPPG G G G G PG PG G +G G G G GE+G G G+ G G G G G++GP G G G + G G G GP GSRGL G G G +G R G +GS G G VG +G PG PG G G+RG+ G KG
Sbjct: 661 GDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGRKGHKGHPG---AAGHPGEQGQPGPEG---------------------------------------------------SPGAKGYPGRQGFPGPVG------DPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGL------------------PGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096 HSP 8 Score: 64.6994 bits (156), Expect = 1.371e-9 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ G RG G G+KG+ GP G+ G G G +G +G G+ GPRG PEG AG G G G G +G GN GD G VGP G GNPG+ G G G G GE
Sbjct: 1371 HPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGE 1479 HSP 9 Score: 63.1586 bits (152), Expect = 3.492e-9 Identity = 142/400 (35.50%), Postives = 160/400 (40.00%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---PGPKGETGLMGPIGPVGEDG 4039
G G G KG G G GE+G GP G G KG G G G G G GSRG G+ G G PG G G GV G G +G G PG GE GPP G G G G PGV G GDTG LGP G GP+G++G +G G PG KG+ G G+PG G G G G G G G G PG GKAG +G G G G G GD GPPG G G +G G +RGL G G+ G +G+ G G PG G G KG PG PGL G +G+ G+ PGP GE GLMG IG VGE G
Sbjct: 688 GPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGL------------------------------PGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVG------------------------------YPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGD------PGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPG------------------------------ARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPG 991 HSP 10 Score: 61.2326 bits (147), Expect = 1.413e-8 Identity = 204/589 (34.63%), Postives = 251/589 (42.61%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGK------------PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGD---------------VGPLGKTGLKGT------------RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGAS---GAEGQPGVKGTKGDTGI------------LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER------YLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G+RG GLPG PG+ GK G +G G G G+ G PG G G G GP G LG GD G GP G G KG + G G +GE G++G G +G G G G +GD GPLGK G KG+ G++G G G G+ G G +G+ G PG G G GP+G G+PG G G KG G GL G G PG G GP G+ G G G+PG+ G KGD G+ +G G G G G G G G RG PG +G+ G+ GP+G +G G QG G KG +GP G PG G G +G+ G G G G G GP G+ GLPG+ G QGP G G GE G +G G PG+ G+ G +G GP+G P G +GL G+ GEPG +G+ LKG +G PG G G KG+ PGPPG+TG G+ G PG +GE G G G G G
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMK------------------------------------GLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEG---------------DEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLG------------------------PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQG 1249 HSP 11 Score: 60.077 bits (144), Expect = 3.335e-8 Identity = 48/111 (43.24%), Postives = 57/111 (51.35%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---------PGYAGNPGIKGSRGPVGNQGRDG 2131
Y G G++G G G G G G RG G KG KGE G +G G G +G +G G+QG GPRG G +G EG+ G PGY G+ G G GPVG GR G
Sbjct: 1350 YPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRG 1460 HSP 12 Score: 58.9214 bits (141), Expect = 8.422e-8 Identity = 194/552 (35.14%), Postives = 240/552 (43.48%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ---GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKV---GEPGQKGERYLKGIKGSPGTIGAV---------GSKGEPGPPGLT---------------GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G PG G G G+PG +G G+ G G G G G+PGP+G RG G G G GS G+RG G G G+ G PG G GE+G GL G G +G GP G GD G LG G G +G G+ G G+ GL G +G Q GVSG+PG GD G + G G+ G G+PGP G+ G KG +G GP G G G+ GPPG G G +G+PG +G G G LGP G++ G G G G G+ G G G G++G G G PGR G +G GL G +G G G G G G G G GP GS G PG G G G G G G RG G G G+ G RGP+GP G +GS+GL G+V G PGQ G++ G +G G G + G+KG PG PG GP G G PG G++G+ G +GP+G GE
Sbjct: 696 KGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGR------------------------------------PGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSH---------------GLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDE---------GPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAG------------------------EQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGE 1163 HSP 13 Score: 56.225 bits (134), Expect = 5.460e-7 Identity = 47/103 (45.63%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ GA+G G G G+ GP G+ G +G G G GE QG GPEG G KG G QG GP G G KG G +G PG G PG G RG G G+ GE
Sbjct: 671 HDGAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGE---QGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGE 770 HSP 14 Score: 54.6842 bits (130), Expect = 1.577e-6 Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
Y G G+ G G+ G+ G G G RGE+G G G++G RGP G+ G G+IG+ GP G G GD G++GP GY G G+KG G VG G G+K
Sbjct: 743 YIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGE---RGPPGLDGNPGEIGL---PGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDK 840 HSP 15 Score: 54.6842 bits (130), Expect = 1.645e-6 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY---AGNPGIKGSRGPVGNQG 2122
G RG G +G G+ G G G G+ G G G G+ GP+GP G DIG +G GPRG G G EG +GPPG +G PG KG RG G+ G
Sbjct: 1490 GKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPG------DIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLG 1583 HSP 16 Score: 53.1434 bits (126), Expect = 3.818e-6 Identity = 46/108 (42.59%), Postives = 57/108 (52.78%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQG------ETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G G G G G G+RG +G+ G+ G G G RG G+ G +G++G G E GP G DGN G+ G GPPG G G G+ GPVG G G K
Sbjct: 718 GAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMK 825 HSP 17 Score: 53.1434 bits (126), Expect = 4.874e-6 Identity = 42/103 (40.78%), Postives = 51/103 (49.51%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+KG G G G +G GP G G +G G +G G G GP+G G G+ G G+ G G RG G G G +G PG+ PG G RGP G G GE
Sbjct: 695 HKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGF---PGDFGERGPPGLDGNPGE 794 HSP 18 Score: 52.7582 bits (125), Expect = 5.530e-6 Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 2
Query: 1868 GDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G GP G VG G G G+KG+ G GP G +G+ G +G+ G++G+ GP G DG KGD G GP G G G +G +G G+ G G
Sbjct: 1132 GPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219 HSP 19 Score: 52.373 bits (124), Expect = 7.060e-6 Identity = 198/578 (34.26%), Postives = 242/578 (41.87%), Query Frame = 2
Query: 2486 RGPPGTRGPSG---LPGKPGI---DGKEGSIGPKGDLGPRGQSG------NPGPQGIRGARGQSGPTGELGSKGDRG------------KFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGP------------DGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEP---GSPGDAGVNXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRG------EQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---------------GSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
RGPPG G G LPG PG+ G G++GP G GP+G G PG +G +G +G G +G+ G +GD+G K GP G GDKG G G G G G G G+ GP+G G+ G RGL G G +GP G +G+ G G G+ GL G++GE G G G G G G G+ GEP G GD GV G G G +GS G G G G PG G G +G KG G GP G G G G G+ G G GQPG +G G+ G G +G G G G G G +G +G G G G GP G GE G+ G G KG+LGP+G PG G G G PGL G G GP G G +G+ G G+ G G G G+ G GP GI G G +GK G+ G+KG+R KG KG G +G + GS+G GP G G G +G PG G G G
Sbjct: 783 RGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGS---------------LGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGL---------------------IGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVP------------------------GREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKG 1300
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Match: Col24a1 (collagen, type XXIV, alpha 1 [Source:MGI Symbol;Acc:MGI:1918605]) HSP 1 Score: 125.946 bits (315), Expect = 2.690e-28 Identity = 260/824 (31.55%), Postives = 356/824 (43.20%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQ---SGNPGPQGIRG---ARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGK---TGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKG-DTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXX------XXXNSGPQGVEGELGIQGPPGRKGELGPIG---LPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRG-PNGP--IGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL---KGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQ--SFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSV---KQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNF-LRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKD 4819
G PG RG G PG G+ G G +GP G+ GPRG +G PG G+ G G SG GE G+KGD G G G TG+ G RG+PG+ G G G +G G G G G E G +G +G G+ GP+G G+ G GP G G G RG +G KG +G+ TG GSRGP G GE G G G +G G +GL+GP G PG G G G+ G SG G G KG G D+ +LGP G G GP+G G G G G G G +TG GP G G+ G QGP G +G GP G +PGP G PG+PG G GP G G G G G G PG+ G G G P P G+ G GP+G G GP G G PGPKG +GL G+ G PGQ+G R +G++G+PG G G G+ PGP G G G G GPKG G G GP+G +G G G GP R IR E +S + S + + + + +F + +++ + I+ P G +++ AR C D+ + + +DG+Y+IDPN G D+ EV C FS +TC+S V K + G+ + + + + + P S + D ++ + N + ++E L Q V+ D ++ + + K + T + + +++ + L P+ G KR +
Sbjct: 982 GSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPG---------------EDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGT---------------------------------RGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSG---------------------------KPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIVGIVGPKGPIGQRGNTGPLGREGIIGPTGGTGPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRRQMDINAAIRALIESNSAQQMESYQNTEGTLISHSSDIFKTLTYLSSLLSSIKNPLG-TRENPARICKDLLSCQYKVSDGKYWIDPNLGCSSDAFEVFCNFSAGGQTCLSPVSVTKLEFGVSKVQMNFLHLLSSEATHTITIHCLNTPRWSSTWADGPELPISFKGWNGQIFEENTLLEPQ-VLSDDCKIQDGSWHKAKFLFHTQNPNQLPVTEVQNL-PHLGTEQKRYIES 1727 HSP 2 Score: 99.7525 bits (247), Expect = 2.746e-20 Identity = 196/541 (36.23%), Postives = 242/541 (44.73%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSK---------------GDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGP---AGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGP------PGLTGPQGKRGNP---GPKGETGLMGPIGPVGEDG 4039
G+RGPSG+ G G G G G G G +G G+PGP GIRG G SG G+ G + G G+ GP+GP G G RG PG G G G GPIG G E G RG GRKG +G GP+G KG+VG G G G G VG+ G G TG +G +G +G G G G+ GV +G G PG PGP G G+ G +G G G+PG G+ GP G G +G +G G KG KG+ G RG GL G G + G +GV+G+ G QG PG G++GP G PGP G G + GLPG+ G++GP G SG QGE G +GD GP G AG G+ GP G G G G G G +G G G PG+ G++ G+ G+ G +G G G PGP PG G GK+G+ GP GE G GP G VGE+G
Sbjct: 724 GSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFG---------------------ELGSRGKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGV------------------MGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGK---RGLPGLPGKAG---------------------SPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIA------------------------GLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPG---------------APGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENG 1162 HSP 3 Score: 94.7449 bits (234), Expect = 9.895e-19 Identity = 208/617 (33.71%), Postives = 255/617 (41.33%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGS------------------------IGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG------------------------------------------------IKGSEGKTGLMGSRGPQGVSGEPGS---PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA------------------GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGP------PGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGP G GP G PG PG+ G +G +GP G G +G G+PG G+RG G G G +GS G G+ G GP G+ G KGVRG +G G VG +GP+GE+G G GK G KG +G G + GS G +G+ G +G QGV+GEPG PGD G G G G +G GP+G G G G GP G +G GDIG+ PG+ G GP G G G G PG+KGT+G+ G +GP GE G RGKPGR+G G GP+G++GE+G QG G+ GE GP+GLPG VG GS G G+ G GP G G +G G G RG PG G GQRGP GP G+ G G G G G G G P GL GK G PG++G + G +G PG+ G VG GEPGP GL G G G PG +G++GL G G G+ G
Sbjct: 531 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGS---------------------------------------------KGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGFPGDIGI------PGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELG---------------SRGKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGI------------------------TGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLP------GLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGG 1051 HSP 4 Score: 87.0409 bits (214), Expect = 1.990e-16 Identity = 204/536 (38.06%), Postives = 235/536 (43.84%), Query Frame = 2
Query: 2519 LPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG------------EKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXS----------------PGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
LPG G G GS GPKG GPRG P G+ G +G G GE G++G RG G G G GERG G + G +GL G G VGP G G E G GP G G G +GE G KG G G G+ G G GEPG+PG+ G+ G+ G +G G G G E G KG++GL G G GR G+ G PG G G GQ G G KGD G +GP GE G GP G +G G KG RG G G G GP EGE GI G G +G+ GP GLPGP G G G+D P G PGL G G QGP G G QG G +G+RG G G G GP+G GI PG G GP G G G G+ G G+PG G++ L G+ GSPG G GS G G G +GP G G PGPKGE GL G G G+ G
Sbjct: 926 LPGLVGARGAPGSPGPKGQRGPRG------PDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQG---------------------------------------KPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPG---------------EDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGP---EGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGI---------PGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGH 1389 HSP 5 Score: 85.1149 bits (209), Expect = 9.309e-16 Identity = 184/546 (33.70%), Postives = 221/546 (40.48%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGK---EGSIGPKGDLGPRGQSGNPGPQGI------RGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTG------LKGTRGEVG---IKGSEGKTGLMGSRGPQGVSGEPGSPG----------DAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILG------PRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA---------GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
GPPGT G SGL G+PG G GS G G+ GPRG+ G PG +G+ +GA G SG GE G KG+ G G GP G G+ G PG +G G G RG LG+KG G +GP GE G GP G G +GTRG VG + G EG+ G+ G RG QG G G PG D+ V G G G+ G G G G G G G G G++G G GP G PG G GP G+ G+ G +G+ GV G G GI G P+G QG GV+G G G PG G+ G +G+PG SPG G AG GP GG G G GE+G G PG+ G G RG G G+ +G+ GL G+ GE G +G L G +G PG G G G G G GP G+RGN GP G
Sbjct: 1029 EGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGT---------------------------------PGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYP------------------------------GVDGMSGYPGKPGLPGKQGLLGVPG------------------------------SPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHRGTPGDQGL------------------------RGAPGLKGQPGEHGDQG---LAGFQGFPGPRGPEGDAGIVGIVGPKGPIGQRGNTGPLG 1454 HSP 6 Score: 61.2326 bits (147), Expect = 1.600e-8 Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP------GYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G +G G+ GD GP+G+ G RG G+ G+ GE G++GP G EG +G++G+ G +G+ GP G G G+ G G P G G G+KG+ G G G DG+K
Sbjct: 990 QGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDK 1098 HSP 7 Score: 59.6918 bits (143), Expect = 4.665e-8 Identity = 46/102 (45.10%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG++G G +G G SG VG GE G +G+ G G+ G G EG G +GD G+QGE G +G G G G+ G PG G PG G G QG+DG K
Sbjct: 985 GERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEE---GLQGKDGLK 1083 HSP 8 Score: 59.3066 bits (142), Expect = 5.429e-8 Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G++G GAKGD GP+G G GE G +G G G +G +G +G+ G G G+ GE G +G+ G G G VG PG G PG +G G G +GR G+K
Sbjct: 1035 EGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKK 1137 HSP 9 Score: 58.5362 bits (140), Expect = 8.999e-8 Identity = 49/105 (46.67%), Postives = 59/105 (56.19%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGI---AGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GARG GS G KG GP G G G+ G G KGE G QG RG G+ AG G+ G+QG+ G +G G+ GD G G PG G PGI G G +G +G G +
Sbjct: 931 GARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTE 1035 HSP 10 Score: 57.3806 bits (137), Expect = 2.391e-7 Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 2
Query: 1847 RGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGI------QGETGPRGKDGNK---------GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ +SG KGD G G VG G G KG+KG G+ G RG G+ G+ G+IG QG GP G G+K G+ G +GP G G PG++G +GP G QG G+
Sbjct: 564 QAASGEKGDPGLLGLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGD 674 HSP 11 Score: 54.6842 bits (130), Expect = 1.474e-6 Identity = 45/102 (44.12%), Postives = 55/102 (53.92%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
YKG G+ G GA G GP G+ G +G G KG +G G QG RG G +G G G+ G GP+G G G +G G PG G PG +G G G+ GR G
Sbjct: 1245 YKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTG 1346 HSP 12 Score: 54.299 bits (129), Expect = 1.745e-6 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
++G+ G +G GP G++G+RG+ G KG GE GP G +G G +GDIG GETGP G G G GS+G G G+P GP+G QG G
Sbjct: 821 LKGTQGEEGPIGPFGELGSRGKPGRKGYMGE---PGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSP------GPLGPQGEKG 907 HSP 13 Score: 51.9878 bits (123), Expect = 9.973e-6 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G+ G +G+ G+ G G+ G +G G G G G GPRG GIAG+ G++G++G G G G +G+ G+ G G AG+ G G GP G G GE+
Sbjct: 972 RGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEE 1074
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Match: Col11a1 (collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]) HSP 1 Score: 113.62 bits (283), Expect = 1.918e-24 Identity = 68/262 (25.95%), Postives = 117/262 (44.66%), Query Frame = 2
Query: 4226 FVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ D + +F ++ + I+ ++FP G + + ARTC D++L DG+Y+IDPN+G DS +V C F+ +TCI K+ G+ P + +W + + G + D+ ++ QM FL+ + + Q + C QS + D VL K++ LG N+ M Y++ ++ YDGC R + ++ T + +PIID IND+ ++ G V CF
Sbjct: 1570 YSDGMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRISSWPKEKPGSWYSEFK-RGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYNCHQSAAWYD-------------VLSGSYDKALRF-----LGSNDEEMS---YENN-----PHIKALYDGCASRKGYEKTVIEINTPKIDQVPIIDVMINDFGDQN-QKFGFEVGPACF 1802 HSP 2 Score: 104.76 bits (260), Expect = 7.919e-22 Identity = 58/207 (28.02%), Postives = 101/207 (48.79%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLFQG-KFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPS-STSFMNLPF--EFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPL-DISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCN 853
VD+L A+ + +G + FC N + A+R + A + LF G FP++FSIL T K + + S+ N++ L V GR + D + + N P ++ DG+WHR+A SV+K +V++++DC+ + L+R+ + D +G ++ + D F G + L+ G A+ C Y+PDC+
Sbjct: 38 VDILKALDFHNSPVGISKTTGFCTNRKNSKDPDVAYRVTEEAQISAPTKQLFPGGIFPQDFSILFTIKPKKGTQAFLLSLYNEHGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVEKKTVTMIVDCKKKITKPLDRSERSIVDTNGIMVFGTRILETDV-FQGDIQQFLITGDPKAAYDYCDHYSPDCD 243 HSP 3 Score: 70.8626 bits (172), Expect = 1.892e-11 Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +G++G+KG +GE G GPRG +G G KG G G+ GP G+ G KG G G PGY G G KGS G G G +GEK
Sbjct: 763 KGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK 865 HSP 4 Score: 60.4622 bits (145), Expect = 2.496e-8 Identity = 50/111 (45.05%), Postives = 58/111 (52.25%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---------GYAGNPGIKGSRGPVGNQGRDGEK 2137
G G +G G KGD G GQVG RGE G +G KG G G GP G AG KG +G+ G G G+ G KG G G P G AG PG +G RGP G +G G +
Sbjct: 782 GFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGAR 892 HSP 5 Score: 55.8398 bits (133), Expect = 6.124e-7 Identity = 187/460 (40.65%), Postives = 215/460 (46.74%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGP---------DGEKGDVG------------------PLGKTGLKGTRGEVGIKGSEGKTGLM---GSRGPQGVSGEP---------------GSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNG 3733
GP G G G G PG+ G G GPKG G G G G +G RG G+ GP G+ G G RG G +GPTG G +G G GPPGP G GP G G G G KG G G G G G RG G +G GP GP GE G +G GK G KG G GI G +G G+ G RG G G P GSPG+ G G G G G GP GP G G G PG +G +G G G+ GP G PG G AG PG+ G G G+PG KG+KGD +GE G GP G G G G G G G G G G +G+ G +G PG G +G GLPGP G G +G G GPPG G G GP G+ G G G G G G +GE GE G+ GPPG AG+ G +G G
Sbjct: 824 GPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD------KGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGLPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGVVGDKGEPGEAGNPGPPGEAGSGGLKGERG 1277 HSP 6 Score: 55.4546 bits (132), Expect = 9.732e-7 Identity = 42/93 (45.16%), Postives = 52/93 (55.91%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIK 2092
G G +G +G GD GPSGQ G +G++G+ G+ G G QGP+G G G KG GI G+ GPRG+ G G GS G G G PG K
Sbjct: 809 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 901
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Match: Col5a1 (collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]) HSP 1 Score: 111.309 bits (277), Expect = 9.923e-24 Identity = 64/219 (29.22%), Postives = 98/219 (44.75%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRRK-----AFRYESGNSLMAKSDVLF-QGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGP 889
DLL + + G T FC R A+R L + L+ + FP++FSIL T K++ + SI N+ L + GR Y D P + P +L+DG+WHRIA SV K +V+L++DC+ + L+R+ P+ + G + D F G + LL V A+ C+ Y+PDC+ D +Q P
Sbjct: 40 ADLLEMLDFHNLPSGVTKTTGFCATRRSSSEPDVAYRVSKDAQLSMPTKQLYPESGFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQLGLELGRSPVFLYEDHTGKPGPEEYPLFPG-INLSDGKWHRIALSVYKKNVTLILDCKKKITKFLSRSDHPIIDTNGIVMFGSRILDDEIFEGDIQQLLFVSDNRAAYDYCEHYSPDCDTAVPDTPQSQDP 257 HSP 2 Score: 107.457 bits (267), Expect = 1.426e-22 Identity = 65/267 (24.34%), Postives = 116/267 (43.45%), Query Frame = 2
Query: 4220 QSFVDINDAL---FDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+S+VD D + F ++ + +I++++ P G + + ARTC D++L DG+Y++DPN+G +DS +V C F+ TC+ K+ G P + +W + + G + D V QM FLR ++ ++Q + + C QSV + D+ + K L ++D E D Y + DGC + + +++T + +PI+D ND+ + G V CF
Sbjct: 1599 ESYVDYADGMEEIFGSLNSLKLEIEQMKRPLG-TQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFK-RGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYNCYQSVAWQDAATGSYD--KAIRFLGSND--------------EEMSYDNNPY----------IRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDF-GEASQKFGFEVGPACF 1836 HSP 3 Score: 68.1662 bits (165), Expect = 1.050e-10 Identity = 52/103 (50.49%), Postives = 61/103 (59.22%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA GIRG G KG+ G G G +G++G+KG +GE G GPRG +G G KG G G+ GP G G KG G G PGY G G KGS G G G +GEK
Sbjct: 795 KGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEK 897 HSP 4 Score: 52.7582 bits (125), Expect = 5.669e-6 Identity = 41/95 (43.16%), Postives = 50/95 (52.63%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGN 2116
G G +G G GD GP G G +G++G+ G+ G G QGP+G G G G G +G G GK G +G G GP G G GI G GP GN
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGN 935
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Match: Col5a3 (collagen, type V, alpha 3 [Source:MGI Symbol;Acc:MGI:1858212]) HSP 1 Score: 109.383 bits (272), Expect = 3.781e-23 Identity = 136/484 (28.10%), Postives = 215/484 (44.42%), Query Frame = 2
Query: 3605 GLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIG------IVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP---IGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVK--QQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS 5014
GLPGK G G G G +GE G +GD GP PG G +G RGP G IG I GP G G GP G +GP G GP G GL G G G+KG L G+ G PG G G +G PG G G QG G PGP G G GP +GP+G+ G G+ G LGP G PGP G G PG + G +R + + + + ++ ++ ++++++ P G +S C ++ DG+Y+IDPN+G +D+ +V C F+ +TC+ K + L ++ + G W ++ R S D V+ Q+ FL+ ++ ++Q ++C SV + D + +++ +++ + ++ + + +DGC R + + F+ ++ + LP+ D +D+ G + S+CFS
Sbjct: 1306 GLPGKRGSPGRMGPEGREGEKGAKGDAGPDGPPGRTGPIGARGPPGRIGPDGLPGIPGPVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGLQGDPGLPGPVGSLGHPGPPGVVGPLGQKGSKGSPGSLGPRGDPGPAGPPGPPGSPAEV---------------------HGLRRRRSVTDTLEGGLEEVMASLNSLSLELQQLQRPLG-TAESPGLMCRELHRDHPHLPDGEYWIDPNQGCARDAFKVFCNFTAGGETCLYPDKKFETVKLASWSREKPG--GWYSTFRRGKKFSYV-DADGSPVNVVQLTFLKLLSAAAHQRFTYICQNSVAWLDEAAGDH---RHSIRFQGTNWEELSFNQTT---------------------AATIKVSHDGCRVRKGQAKTLFEF-SSSVGFLPLWDVAASDFGQTN-QKFGFELGSICFS 1738 HSP 2 Score: 89.7373 bits (221), Expect = 2.865e-17 Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCG---NSRRKAFRYESGNSLMAKSDVLF-QGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVL--QDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNN 856
VD+L A + G FC +AFR + L + LF G FP+ FS+L+T +++ + + SI ++ V SF LP + ++ DG+WHR+A S+ + V+L++DC+ P IS L V+ QD + SF G + LLL+ AF+ C+ Y P C
Sbjct: 33 VDVLEAWGVHRDQAGVAEGPGFCPLRIPQGDRAFRVGKSSLLSVPTWQLFPDGHFPENFSVLLTLRAQPANQSVLLSIYDEK-----GVRQLGLALGPALGLLGDSFRPLPKQVNIMDGRWHRVAVSISGNKVTLVVDCE---PQPPTFGQGPRFISTAGLTVMGTQDTR-EESFEGDIQELLLIPDPQAAFQACESYLPGCET 227 HSP 3 Score: 85.8853 bits (211), Expect = 4.787e-16 Identity = 215/534 (40.26%), Postives = 269/534 (50.37%), Query Frame = 2
Query: 2501 TRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGV------KGDIGLIGPTGAPGRIGEAGPPGKTG---------------ASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGP---IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQR---GPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
+ GP G PG G G++G+ GP G GPRG G +RG +G SG G G KG+RG+ G G GD+G +GD G+ GPPGP G +GP G G G G +G G G +G + GV GL G G GP G G G +GPLG+ G +G G+ G +G G G G RG G +G+PG GD G NG G G++G G GP G G G PGP+G+ G+ +G++G G TG PG G GP GK G G +G PG++G +G G LGP G G +GP GP G G +G G PG G G+ GP G +G G PG +G +GP IGLPG G GP G G G PG G G G G+PG GLQGP+G +G GE G++G+ G PG G+ G + GP GP GI RG G G PG G +G +G PG G G G G G+ GP G +G PGP GE G +G +G
Sbjct: 677 SEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPG------LRGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKG---KLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGP---PGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKD---GIPGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGI---------------------------RGPAGHSGLPGADG---AQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVG 1165 HSP 4 Score: 82.8037 bits (203), Expect = 4.178e-15 Identity = 202/565 (35.75%), Postives = 236/565 (41.77%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELG------------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGL---------------------QGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER---------YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGL------MGPIGPVGEDG 4039
GPPG G GL G PG G+ G GP+G +GPRG G G G+ G+ G G G +G + G +G GPQGP G GE+G PG+ G PG G G G G GP GEKG GP G G +G G G+KG+ G GL G +G +G G PG GD G G G G PG G G +G KG GL G G PG GE G G G G G+PG KG+ G G LGP GE+G G +G G EGE G G G +G+ G G PGP G G GSPG PG+ GL G +G G +GE G +G GPPG AG + GP G +G VGP G RG PGP GP G G PG +G G G++G G G+ +G G PG IG G KG PGP G G G+RG GP G GL GPIGP GE G
Sbjct: 574 GPPGEDGVKGLQGPPGPTGQAGEPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGIPGVPGSE------------------------------------GPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPK---------------GDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKG------------------------KRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGD---------------------VGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAGVL---GPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKG 1039 HSP 5 Score: 79.7221 bits (195), Expect = 3.835e-14 Identity = 159/463 (34.34%), Postives = 197/463 (42.55%), Query Frame = 2
Query: 2486 RGPPGTRGPSG------LPGKPGIDGKEGSIGPKGDLGP------RGQSGNPGPQG------IRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKT------------------GLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGP------PGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
GPPG G G LPG PG G +GSIG G LGP RG++G PG +G RG RGQ G TG+ G KGD G+ G GP G+KG G GP G G G G +G G G G GE G +GL G G G +GP G+ GDVGPLG+ G +G +GE+G GS GK G G RG G G PG PG G+ KG KG G +G G+PG G GP PG++G G G G KG+ G+ G GP G+ G+ GP G++G G GP G +G+ G +G+PG G+ G G G PG G++GPAG SG G G +G RGPPG+ G G G G +G++
Sbjct: 774 EGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKG------------LPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGL---------------------------------KGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGI---------------------------PGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGDKGDA---------------------GPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFVGVI 1143 HSP 6 Score: 70.0922 bits (170), Expect = 2.936e-11 Identity = 150/411 (36.50%), Postives = 180/411 (43.80%), Query Frame = 2
Query: 2882 KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGS------------EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGEL------------GPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
KG GP+G G G VG G GLKG GEVG +G EGKTG G+ G +G+ G+ G GD G + G PG GEKG +GD G +G G PG G G G G +G G+PG +G G G+ GP G G+ G G G+KG G G+PG G GN G QG+ G G G PG KG GP G PG G +G G G PG G G PG G++G +G G QGE GERG+ G PG G+ G + G+ G G G G+ G GQKG L G +G PG G G G PG PG G PGPKG G GP+GP+GE G+
Sbjct: 477 KGPPGPVGLTGRPGPVGLPGYPGLKGELGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARGLPGDTGPKGDRGFD------------------------GLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAGEPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPR------------GYPGLRGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPK---------------------------GDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKGKLGVPGLPGYP------GRPGPKGSIGFPGPLGPLGEKGK 818 HSP 7 Score: 65.855 bits (159), Expect = 5.650e-10 Identity = 198/590 (33.56%), Postives = 232/590 (39.32%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPG---KPGIDGKEGSIGPKGDLGP------------RGQSGNPGPQGIRGARGQ---------------SGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGP------------LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGA------------SGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------------------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
GP G GP GLPG +PG+ G +G+ G KG++GP G G PGPQG G G+ GP G G +G G+ G QGP G G RG PG +G G G RGL G KG G G G KGD GP G+ G +G +G G+ G EG G G +G GV G PG PG G KG G G +GP G G+ G+AG PG+ G GA GQPG KG G G GP GE+GL G GP G G KG G G+ G +G+ G +G G G+ GPPG G LGP G G VG G G G PGPPG G G + G G G GP G G + G G +GD+GPPG G G G GP+G G +G PGQ G + G IG G KG PG G GP GK G PGP G G G GP GE+G+
Sbjct: 598 GPRGLIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGT---------------------------------SGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPG---------------------------------PKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIE------GREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGERGPVGP------------------------------SGGIGLPGQSGGQ---------GPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGD 1076 HSP 8 Score: 62.3882 bits (150), Expect = 5.877e-9 Identity = 188/572 (32.87%), Postives = 221/572 (38.64%), Query Frame = 2
Query: 2486 RGPPGT------RGPSGLPGKPGIDGKEGSIGPKGDLGP---------RGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---------------GVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGI---QGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTG---------------------PQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+GPPG GP GLPG PG+ G+ G +GP+G G G++G G G RG G +GP KGDRG G G G+KG+ RG GR G GP G DG KG GP G T G GE G +G G GL G G GV+G G+PG G G GE G G QG G G+ G G G GEK G G G GPT G G GPPG G G G GVKGT G+ G+ G +GE+G DG G G +G KG RG PG G G GP+G +G G+ +GPPG GE G +G+PG PG PG+ G +G G G G GE+G RG G G G+R G PG +G+R G G PG G VG G PGPPG G G G+PG +GE G G GP G G
Sbjct: 477 KGPPGPVGLTGRPGPVGLPGYPGLKGELGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARGLPGDTGP------KGDRGFDGLPGLPGEKGQ------------------------------------------------RGDFGRVGQPGPPGEDGVKGLQGPPGPT---GQAGEPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPT---GEKGAQGPPGSAGPRGYPGLRGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKGKLGVPG------------------------------LPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGER------------------------------------------GTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAG 916 HSP 9 Score: 58.9214 bits (141), Expect = 7.233e-8 Identity = 52/112 (46.43%), Postives = 63/112 (56.25%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGM---KGVKGEYGIQGP------RGPEGIAGVKGDIGIQGETGPRGKDGNKGDE------GSVGPPGYAGNPGIKGSRGPVGNQG 2122
G G++G SGA G PSG+ G +GEVGM KG KG+ G GP RGP G +G+ G G QG GP G G KGD+ G +GPPG G PG G +G VG+ G
Sbjct: 1057 GPPGLQGPSGAAG---PSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVG 1165 HSP 10 Score: 57.3806 bits (137), Expect = 2.352e-7 Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGP---RGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G+ G SG +G GP+G+ G+ GE G G G+ GI GP +GP G AG G+ G +GE G G G+KGD+G GPPG GI+G G G G DG +
Sbjct: 1018 GGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPT---GIRGPAGHSGLPGADGAQ 1119 HSP 11 Score: 55.0694 bits (131), Expect = 1.018e-6 Identity = 73/168 (43.45%), Postives = 90/168 (53.57%), Query Frame = 2
Query: 2861 VRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---------AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
RGL G++GS G +GP+G +G+ KG +G+ G G G+TG +G+RGP G G G PG G GE G G G GP GP+G G+PG G G KG KG IGLIG G PG GE GPPG G G G G G G G++GP G++G
Sbjct: 1304 ARGLPGKRGSPGRMGPEGREGE---------KGAKGDAGPDGPPGRTGPIGARGPPGRIGPDGLPGIPGPVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGLQGDPGLPGPVGSLGHPGPPGVVGPLGQKG 1462 HSP 12 Score: 54.6842 bits (130), Expect = 1.552e-6 Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSG------QVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
G G GS G +G GPSG Q G +G +G G KG G +G GP G G+ G G+QG +G G G +GD+G VG PG+ G+ G KG GP G G
Sbjct: 1000 GPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTG 1102 HSP 13 Score: 53.5286 bits (127), Expect = 2.918e-6 Identity = 45/109 (41.28%), Postives = 54/109 (49.54%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGV---------KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G G GD GP G G +G++G+ G+ KG G GP GP G G +G G GE G RG G +GD G PG G PG KG G G+ G GEK
Sbjct: 762 EGQKGPGGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQ---PGATGQPGPKGDVGQNGSPGPPGEK 867 HSP 14 Score: 52.7582 bits (125), Expect = 5.306e-6 Identity = 41/92 (44.57%), Postives = 50/92 (54.35%), Query Frame = 2
Query: 1862 AKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
A GD GP G G +G G G G G +GP GP G G+ G G QG GP G+ G+ G+ G+ GP G G PG G +GP G G GE+
Sbjct: 983 APGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEE 1074
BLAST of Collagen type IV alpha 2 chain vs. UniProt/SwissProt
Match: sp|C7DZK3|CRA1A_DANRE (Collagen alpha-1(XXVII) chain A OS=Danio rerio OX=7955 GN=col27a1a PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.335e-33 Identity = 288/905 (31.82%), Postives = 386/905 (42.65%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLG------PRGQSGNPGPQGIRGARGQSGPTGELG------------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEG---KTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIG---EAGPPGKTGASGAEGQPGVKGTKGDTGILG------------------PRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNS----GPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRG----PNGP--IGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGS------PGTIGAVGSKGEPG---PPGLTGPQGKRGNPGP---KGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYK---RSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G RGP G+PG+ G +GK+G GP G +G G+SG GP+G G +G SG TG+ G + G +G GP+GP G G+ +G PG+ G KG +G G G G G RG G +G GP GPDG KG+ G +G G +G RG+ GIKG +G GL G RGP+G SG+ G G G+ KG KG+IG +G TG+ G+IG GP G G G G PG G +GD GI G +GEQG DG + G G QGV+G G G PG G+ GP G GP G+ G G+ G G G G G G VG PG G G +G G GT G AG+ G RG PG G+ G+ G P P +G++G GP+G GP G G G+PGP G RG G +G PG +G+R KG G PG +G G KG PG P G+ GP+G +GN G G G++GPIG G G++G G LG GP G PG RG PG G G + + P + K R +D + +D +++ + ++ P G +D AR C D+ R DG Y+IDPN G DSIEV C FS +TC+ + + +LE ++ R QMNFL ++ + Q I C I+ + N+ + H + GE L P+ V +D + N ++ ++R D ++LP++ N S L V +CF
Sbjct: 995 GPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGD---------------------SGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGL---------------------------------KGAKGNIGHLGETGSVGKIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEGHKGPQGPIGPPGPKGAKGEQGDDGKVEGPTGAPGLRGPVGKRGDRGEPGDPGYVGQQGVDGLRGKPGAPGLPGDPGPRGTQGPKGSKGEQGQKGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGFPGTDGLAGKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPGPQGSFGPKGERGLPGHPGPSGKRGFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGMLGMFGPKGPPGDFGPKGIQGPKGPQGNMGRGGLAGPVGVIGPIGNPGSRGDTGNKGELGVQGPRGAPGPRGPPGLPGPPGIPLAMNQDFGLGVVQPVFRETHTQKIEGRGLLDMPMLDQAPEILRTLDYLSSLVHSLKNPLG-TRDHPARLCRDLHDCRDTLYDGTYWIDPNLGCSSDSIEVMCNFSSGGRTCLRPI--------------------TTAKLEFSVGR-----------VQMNFLHLLSAGAEQRITIHCLNVTIWSHA----PNQPPSQNAVQFHSW------IGEVLEPD-------VLEDTCWQ--LNGRWQHADFLFR-----------VLDPALLPVVRIS-NLPKVMPSSRFHLEVGPVCF 1782 HSP 2 Score: 88.1965 bits (217), Expect = 7.268e-16 Identity = 219/579 (37.82%), Postives = 268/579 (46.29%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGD---LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGP---DGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPG---SPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEA------------GPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGE------------------------LGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA---------------GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+GP G G G PG+ G+ G G +GPKG +G G G PG G RG+ G G G++G G G FG +GP G GE PG G G GV GL+G G G +G +G KG G +G++GLKG +G+VG+ G +G+ G G +G QG+ G PG PG G GE G G G GP G G G PG GP G KG G GL GP GA GR G+ G G G GA G GVKG +G TG GP GE+GL G +GP G GL G +G G G G G +G G +GI+GP GR+G GP G+PG +GT G G DG PG G G AG G G G G G+QGP+G +G +G A G G +GP G G+ G G G G +G G G G IG G G G G G DG GE G G +G++G PG G G G+PG G+ GP+GK G G +G+ GL G G +G GE
Sbjct: 655 QGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPPGLDGE------------------------------------PGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPSGLPGPPGPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGLPGPPGEKGSTGHPGTPGEGGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGAKGNIGHLGE 1197 HSP 3 Score: 70.8626 bits (172), Expect = 1.174e-10 Identity = 210/550 (38.18%), Postives = 253/550 (46.00%), Query Frame = 2
Query: 2525 GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG------------EKGDVGPLGKTGLKGTRGEVGIKG---------------SEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIG---------------PTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE------------RGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
G+ G G G++G +G G +G +G GP G RG G GP GE G G++G G G G GE+G G G PG GP GP G GSPG +G G+ G G +GP G GV G +G +G GP GP G E G+VGP G G++G G G KG +G G G G G SG PG PG+ G G G G G G G G++G G GP G KG KGD+G G P G PG G GP GK+G SG G+PG+KG KG+ G LG G G + G G +GP+G G +G G PGR G G G+ G G GP G G PGP G G+ GDDG V P G GL+GP G G +GE G+ RG G PG+ G+ G RG GP G G G G G G +GSRG G VG PG +G T+G G +G PG GL G G RG PG +G+ G G
Sbjct: 890 GQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGLPGPPGEKGSTGHPGTPGEGGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGAKGNIGHLGETGSVG---------------------KIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEGHKGPQGPIGPPGPKGAKGEQGDDGKVEGPT--GAPGLRGPVGKRGDRGEPGDPGYVGQQGVDGLRGKPGAPGLPGDPGPRGTQGPKG---------SKGEQGQKGKQGQQGERGSRGSPGVVGLPGPRG------------TVGREGREGFPGTDGLAGKDGSRGTPGDQGDDGEFG 1395 HSP 4 Score: 65.0846 bits (157), Expect = 6.417e-9 Identity = 179/446 (40.13%), Postives = 215/446 (48.21%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKG---------------DVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGEL---------------------GIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR---------GPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGP------PGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
KG +G +G G VG +G +G KG + GP+G+ G KG G G+ G G G G+RG G+ G G PG G G G GK+G G G G G G PG GE GV IG GP G G IG+ GP G G G G GV G G++G+ G +G+ GL G G IG +G KG +G PG G G GPQG GE+ G+ GP G KG+ G GLPGP G +G++G GP G G G +G +GS G PG GL+G G G G+AG G+R G G+AG G RG G G G G G PG G GP G PG GS G G +G G KG R +G G PG IG G KG GP PG G G+ G GPKG G+ GP G G+ G
Sbjct: 616 KGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPPGLDGEPGV---IGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPSGLPGPPGPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGA---AGREGDEGPLGPPGPFGLEGQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGLPGPPGEKGSTGHPGTPGEGGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKG 1055 HSP 5 Score: 56.225 bits (134), Expect = 3.266e-6 Identity = 94/302 (31.13%), Postives = 116/302 (38.41%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPT------------GELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPT------GAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
RGP G RG G PG PG G++G G +G G G G+PGP+G +G +G G G GS G G GP+G G +G G G GL G+ GS G G G+ G+ G GK G G G +G+ G + GS GP+G G PG PG +G ++G KG +GL GP G PG IGE G PG G G +G PG G KG G GP+G G
Sbjct: 1277 RGPVGKRGDRGEPGDPGYVGQQGVDGLRGKPGAPGLPGDPGPRGTQGPKGSKGEQGQKGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGF------------------------------------------PGTDGLAGKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPGPQ------GSFGPKGERGLPGHPGPSG---------------------------------KRGFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGMLGMFGPKGPPGDFGPKGIQGPKGPQGNMG 1497 HSP 6 Score: 55.0694 bits (131), Expect = 6.854e-6 Identity = 143/380 (37.63%), Postives = 172/380 (45.26%), Query Frame = 2
Query: 2972 VGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK------GVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPG---------------TIGAVGSKGEPGPPGL---TGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G+KG +G GL + P+G G+ G PG G+ G +G +G++G GP G G G G G G K G+ G IG +GP GA G IG G G GA G G PG G +G G G G+ G GP G++GE G+ G PG G LG IG GP GT G G +G G PG G++GL+G G G GE GE G +G G+ G G GP G G G G G G GP GP G PG G GL+G G G+ G R L G +G+ G G +GSKG PG GL G QG G GP GE GL+G IGP GE G
Sbjct: 598 TGLKGKKGDPGLSPGKAPKGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFG---------------------------ERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGT---------------VGVPGLNGLKGVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPSGLPGPPGPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAG 935
BLAST of Collagen type IV alpha 2 chain vs. UniProt/SwissProt
Match: sp|Q17RW2|COOA1_HUMAN (Collagen alpha-1(XXIV) chain OS=Homo sapiens OX=9606 GN=COL24A1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 8.641e-33 Identity = 242/758 (31.93%), Postives = 327/758 (43.14%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDL---GPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLG------RKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLM---------GSRGPQGVSGEPGSPGDAGVN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQ--SFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELS 4696
+G PG+ G GLPG+PG+ G +G +GP G++ GP G G G QG GA+G G G +G G+ G G G G++G +G G +G PG G G G G G G G +G G G G +G+ G+ G +KG G IGP GE G GP GK G G +G G +G+ G GLM G RG QG G G PG G + G GP G G G G+ G G +G KG +G+ G GA G+ G G PG G G +G+ G +G KG G GP G+ G+ G G +G KG++G G G G+ G GP G +G GI+G PGR G G G PG G S GLPG G+QGP GE+G G PGI G G RG G G G G G+PG+ G + L G +G PG G G G G G GP G RGN GP G G++GP G G GE R I+ E ++ S + + +D ++ +F ++ ++N + I+ P G +D+ AR C D+ ++ +DG+Y+IDPN G D+IEV C FS +TC+ V + +LE + + QMNFL +S++ I C + + ++ S
Sbjct: 977 QGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKG---------------------------SSGLPGSPGIQGP---------KGEQGLPGQPGIQGKRGHRGAQGDQGPC---------------------------GDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGE-----KGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESNTALQMESYQNTEVTLIDHSEEIFKTLNYLSNLLHSIKNPLG-TRDNPARICKDLLNCEQKVSDGKYWIDPNLGCPSDAIEVFCNFSAGGQTCLPPV--------------------SVTKLEFGVGK-----------VQMNFLHLLSSEATHIITIHCLNTPRWTSTQTS 1634 HSP 2 Score: 115.546 bits (288), Expect = 2.901e-24 Identity = 204/523 (39.01%), Postives = 250/523 (47.80%), Query Frame = 2
Query: 2537 IDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXX----------------XXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNP------GPKGETGLMGPIGPVGEDG 4039
+ G G+ GP G GP+GQ G+ GP G+ G +G G GE G +G RG G G TG+ GERG G G G G G ++G+ G G +G G +GP GE G GP G G G +GE G KG G G +G G G+ GEPG+PG+ G+ G G++G+PG G GE G KG++GL G G GR G+ G PG G G GQ G G KGD G +GP GE G GP G G G +G G +G+ G+ G G +GE GI G G +G+ GP GLPGP G G G+D P G G G VG PGL G G QGP G G QGE G +G+RG G G G GP+G GI G G G G G G G G G G GK G PG +G G+ G+PG G GS G PG PG+ GP+G++G P G +G G G GP G+ G
Sbjct: 907 LPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTG---------------------------DRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ---------------GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVG---SRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPG 1384 HSP 3 Score: 110.923 bits (276), Expect = 7.170e-23 Identity = 175/514 (34.05%), Postives = 214/514 (41.63%), Query Frame = 2
Query: 2534 GIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKG---SVGPIGPDGEKGDVGPLGKTG---------LKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG------RIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G G+EG IG G+LGPRG+ PG +G G G G GE+G +G+ GK G GP G G E G+ G +G KG S GP+GP GEKG +G G G L G G G GS+G G GSRGP G+ GE G G G +G++G +G GLIG TG PG + G G PG TG G G+PG++G +GD +GP GE G++ GP G EGE G+QG PG KG++G G G G G G+ GAPG GL GK GL+G GG G GE GE+G+ G PGI G +G+ G G G +G VG PGQ+G KG KG G G VGS+G PG G +GP+G RG G G GLMGP G
Sbjct: 804 GTQGEEGPIGAFGELGPRGK---PGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG---------------------------------------------EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKG------------------------------EKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGD---VGPPGEMGME---------------------------GPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEE---------------GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTG------------------------------LPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDG 1164 HSP 4 Score: 109.768 bits (273), Expect = 1.892e-22 Identity = 227/577 (39.34%), Postives = 274/577 (47.49%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---------------PGPQGIRGARGQSGPTGELGSK---------------GDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDV------GPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGS------------------PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---GVKGDIGLIGPTGAP------GRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNM---GQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGK---RGNPGPKGETGLMG 4012
GP G GP+G+PG G+ G +G G KGD G +G +G PGP G+RG G SG TG+ G + G G+ GP+GP G G RG PG G G G GPIG G E G RG G+KG G GP+G KG+V G +G+TG G GEVG+ GS G+ G GS GP G GE G PG G G G QG +G +G GP G+ G G G +GEK G +G GLIG TG P G+ G G PG TG G G+PG++G +GD +GP GE G++ GP G EGE G+QG PG KG++G G G G G G+ GAPG GL GK GL+G GG G GE GE+G+ G PGI G + GQ G GP GIVG G RG+PG G G IG G GSRG GK+G+ G KG R G +G+ G +G +G GEPG PG G QG+ G PGPKGE G G
Sbjct: 687 GPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFG---------------------ELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGD---VGPPGEMGME---------------------------GPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEE---------------GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGAR---GTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194 HSP 5 Score: 100.523 bits (249), Expect = 1.193e-19 Identity = 202/550 (36.73%), Postives = 253/550 (46.00%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE---LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---------------KGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGE---PGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXX------------XXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG +G GL G PG+ G G G G G G G PG QG+ G G GP G +GS G+ G+ GP+G G G RG G KG +G G G GP G DG +G VGP+G G G G +G+ G++G G+ G +G QG +GE PG PGD G G G G +G GP+G G G+ G GP G +G GDIG+ PG+ G GP G G G G PG+KGT+G+ G +G GE G RGKPG++G G GP+G++GE+G QG G+ GE GP+GLPG VG +G G+ G G G G G GP+G GLPG G +GP G +QG G+RG RGP G+ G G +G G G +G RG G +G+ G GER +G G G G+ G +G PG PGL G Q G+ GP GE G+ GP G GE G
Sbjct: 561 GPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGF---------------------------------------KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGI------PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELG---------------PRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG---SQGPKGQRGSRGPDGLLGEQGIQGAKGEKG------------------------DQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ---GDVGPPGEMGMEGPPGTEGESG 1020 HSP 6 Score: 81.2629 bits (199), Expect = 8.494e-14 Identity = 172/521 (33.01%), Postives = 216/521 (41.46%), Query Frame = 2
Query: 2504 RGPSGLP---GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGP G+P G PG+ G G GPKGD G PG +G +G G GP G G KG +G G G G++G + G G G G G +GL G +G+ GP IG GE G +GP G+ G+ G RG+ G KG +G G G RGP G+ G PG + G GP G G++G +G +GP IG AG PG G SG +G PG+KG KG+ G G GE G G +G +G+ GPPG +G+ GP G G PG G SG G +G G G+PG+ G +GP +G G RG GPPG+ G G+ GP G G + G GK G+ G GE +G+KG G G +G GE GP GL G G G+ G KGE G GP+GP GE G
Sbjct: 512 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQG---------------------------------IPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG------------------------------LVGGTGPPGFPGLRGSVGPVGP------IGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYP------------------------------GDKGAVGLPGPPGMRGKSGPSGQTG------------DPGLQGPSGPPGPEGFPGDIGIPGQNGPEGP------KGLLGNRGPPGPPGLKGTQGEEGPIGAFGEL---------------------------GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKG 888 HSP 7 Score: 70.4774 bits (171), Expect = 1.835e-10 Identity = 190/552 (34.42%), Postives = 235/552 (42.57%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP------IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG------------SGTQGEAG------ERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI------KGSPGTIGAV---GSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RGP G GP G PG PG+ G +G PKGD G PG +G +G G GP G G KG +G G G G++G + G G G G G +GL G +G+ GP IG GE G +GP G+ G+ G RG+ G KG +G G G RGP G+ G PG + G GP G G++G +G +GP IG AG PG G SG +G PG+KG KG+ G G GE G G +G +G+ GPPG +G+ GP G G PG G SG G +G G G+PG+ G +GP G GTQGE G E G RG PG G G+ GP G G VG G G+ G GP+G G G GS G G+ G PG G + KG+ G PG IG + G G GPPG GP+G+RG+ GP G G G G GE G+
Sbjct: 512 RGPRGIPGPHGNPGLPGLPGPKG---PKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQG---------------------------------IPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG------------------------------LVGGTGPPGFPGLRGSVGPVGP------IGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYP------------------------------GDKGAVGLPGPPGMRGKSGPSGQTG------------DPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGD 949 HSP 8 Score: 63.5438 bits (153), Expect = 1.826e-8 Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV------KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
YKG G+ G GA G GP G+ G +GE G+KG KG+ G GP G GI G++G +G +G G G DG G+ G +GPPG G PGI+G G G G G
Sbjct: 1226 YKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPG 1333 HSP 9 Score: 62.3882 bits (150), Expect = 4.277e-8 Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
G +G RG GA+GD GP G G +G+ G GV+G G QG P+GPEG AG+ G G +G G RG G G EG +GP G G G KG RG
Sbjct: 1363 GIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456 HSP 10 Score: 59.6918 bits (143), Expect = 3.397e-7 Identity = 48/102 (47.06%), Postives = 58/102 (56.86%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+ GARG GS G KG G G G GE G++G KGE G QG RGP G+ G G+ GE G +GK G +G GS G G G PG++G +G VG G G
Sbjct: 910 HVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGN---PGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMG 1008 HSP 11 Score: 56.9954 bits (136), Expect = 1.894e-6 Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------------KGDIGIQGETGPRGKDGNK---GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G G++G GAKGD G +G VG GE G++G G G +G +G +G+ GV KG++G+ G GP G+ G G EG VG PG G PG KG +G +G G G +
Sbjct: 1016 EGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSR 1133 HSP 12 Score: 56.6102 bits (135), Expect = 2.698e-6 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG +G G +G G +G G GE G++G++G+ G G G EG G +G+ G+QGE G +G G G G G PG G PG G G QG+DG K
Sbjct: 966 GERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEG---LQGKDGLK 1064 HSP 13 Score: 55.8398 bits (133), Expect = 4.866e-6 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+GA+G +G G +G HG G+ G GE G +G G G+ G G G+ G G G+QG+ GP G+ G +G G+ G G G PG KG G G+ G GE
Sbjct: 941 QGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGE 1042 HSP 14 Score: 55.4546 bits (132), Expect = 6.534e-6 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGV------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
++G G++G G+ GD G G+ G RG G G GE G++GP G EG +G+ KGD+G G G G+ G +G+ G+ G G G G+KG G G G DGEK
Sbjct: 970 FQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEK 1079 HSP 15 Score: 55.0694 bits (131), Expect = 7.476e-6 Identity = 113/275 (41.09%), Postives = 131/275 (47.64%), Query Frame = 2
Query: 3215 PGRIGEAGPPGKTGASGAEGQPGVKGTKGDTG------ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPP------GLTGPQGKRGNPGPKGETG 4003
G+ G G PG G G G PG KG KGD G + G +G+QGL G +GP G +G KG +G PG G G G G G +G G PGR+G GP G PGP G G G PG+AG GP G G G G++G +G G G+ G RGP G G G G G PG G G +G GP G G+ G +G G KG L GIKG G G G GEPG P GL GP G RG GP G+TG
Sbjct: 509 SGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFI------------------------GSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKG---LPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTG 756
BLAST of Collagen type IV alpha 2 chain vs. UniProt/SwissProt
Match: sp|Q5QNQ9|CORA1_MOUSE (Collagen alpha-1(XXVII) chain OS=Mus musculus OX=10090 GN=Col27a1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.158e-31 Identity = 286/771 (37.09%), Postives = 369/771 (47.86%), Query Frame = 2
Query: 2543 GKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKG------------DVGPLGKTGLKGTRG------EVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXX-NSGPQGVEGELGIQGPPGRKGELG---PIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGT------------QGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG---------PVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIY----GDSELSEENKFK 4714
G G G KG GPRG G G QG +G +G+ GP G G G +G G +G +G KG G PG GPPG G G G G G G G +G GP G +GE G+ G G KG +GP+GP GE+G D GP+G GLKG RG E G KG EG G GS GP G++G PG G G GEKG++G +G++G G +G GIPG+PGP G G KG G +GPTGAPGR+G G PG G +G +G + G G G G +G+QG DG G + G G EG G++G PG++G+ G P G PGP G+ G G G PG G SG+ G G G PG G G QGP G +G+ QG+ G GD GP G AG G G G G GP G +G+ G G +GP G G +G GL G GEPG KG+ G G PG G G KG PG G G QG RG PG G+ G++GP G P G+ G G G GP GPPGP G G PG + + +G+ S Q +D +F + ++N I+ I+ P G K++ AR C D+ ++ DG Y++DPN G D+IEV C F++ +TC+ + + + E A+SR QMNFL +S+ Q I C ++ G S + +F+
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKG---ITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAFQTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLG-TKENPARVCRDLMDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPI--------------------TASKAEFAVSR-----------VQMNFLHLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFR 1774 HSP 2 Score: 91.6633 bits (226), Expect = 5.333e-17 Identity = 229/579 (39.55%), Postives = 279/579 (48.19%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDG---KEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGEL------------GSKGDRG------------KFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK------------GDVGPLGKTGLKGTR------GEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLD-XXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGE---LGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGT------------QGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RG PG RG G G G DG ++GS G KG +GPRG+ G PG QG G RG SG G L G G+ G + GP+GP G GE G+ G G KG +GP+GP GE+ GD GP+G GLKG R GE G KG EG G GS GP G++G PG G G GEKG++G +G++G G +G GIPG+PGP G G KG G +GPTGAPGR+G G PG G +G + G+ G G G G +G+QG D GP G G +G G G +G G+ G G EG G++G PG++G+ GP G PGP G+ G G G PG G SG+ G G G PG G G QGP G +G+ QG+ G GD GP G AG G G G G GP G +G+ G G +GP G G +G GL G GEPG KG+ G G PG G G KG PG G G QG RG PG G+ G++GP G +G G
Sbjct: 1038 RGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGE---------------------------------------------PGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK---GITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSG 1568 HSP 3 Score: 80.1073 bits (196), Expect = 2.184e-13 Identity = 201/620 (32.42%), Postives = 245/620 (39.52%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPG---IDGKEGSIGPKGDL------------GPRGQSGNPGPQGIRGARGQSG------PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---------KGDVGPLGKTGLKGTRGEVGIKGSEGKTGL---------------------------------MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXS---PGLPGKAGLQGPAGGSGTQGEAG-------------------------------------ERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG GP G+ GKPG + G G +GP+GD G G+ G PG G+ G++G+ G P GE G G G G G G+KG+RG G G PGP G G G G G+ G G G PG +G+ G+ G KG GP GPDG KG VGP G+ G G +G G +G G G MG +GP G GEPG PGD+ G+KGD+G +GP G G IG+ G PG G G G G+KG +GD G G GE+G + G +G G+ GP G+ G G +G PG++GE G G G G G G+ G PG PG G G G G+ G PG+ G QG G +G G G +RGDRG PG G GQ G G RG G+ G+PG G R G KGS G G G G+ GP G G QG +G PGP+G G GP G G DG
Sbjct: 901 GPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPG------SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDS------------------------------------GMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQE------------------GLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG------------------------------LRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDG 1430 HSP 4 Score: 71.2478 bits (173), Expect = 9.571e-11 Identity = 114/338 (33.73%), Postives = 143/338 (42.31%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
RG G PG PG G+EG G +G+ G +GQ G+PGP RG+ GP G G +G +GK G GP+G +G +G++GL G +G VG GP+G G G G+ G G +G+ G G G G G RG GV+G PG+ G G KG+ GL G G PG+ G G TG G +G+PG KG GD+G +G G GL G KG G G +G G GP G+ G+ GI GPPG LGP GLPGP G
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGP------RGRPGPKGSKGEEGPKGKPGKAGPSGRRG---------------------------------------------TQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPP------------------------------------GFKGESGLPGQLGPPGKRGTE---GGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGL---------FGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGM---LGPSGLPGPKG 1574 HSP 5 Score: 70.8626 bits (172), Expect = 1.142e-10 Identity = 213/568 (37.50%), Postives = 254/568 (44.72%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ------GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASG------------AEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPP---GRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR------------GPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXX---------XXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK---GIKGSPGTIGAVGSKGEPGPPGLTGP------QGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GP G PG G G++G GP GD GP+G G G G+ G G G G G G RG+ G G GD GERG PG G PG G G GV GL+G G++GP+G P G KG +G +G+ GLKG +GE G+ G G G G +G G G+PG G AG G +G G PG G G+ G GD G G G PG G GPPG+ G G EGQPG KG G G+ G +GE G G G G QG+ G +G+ G P G KG+ G +G PG G G G G PG G G+ G GP GS GLPG G +G G G G AGE+G + G PG G G+RG +G G +G GP G PG GP GP+G PG G +G G VGEPG G+ +K G G PG G +G +GEPG G GP +G RG+PGP GE G G G GEDG
Sbjct: 709 GQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG---------------------------PPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAG---------------DKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPG---------------------DPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDG 1213 HSP 6 Score: 70.8626 bits (172), Expect = 1.264e-10 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G+ G SG KGD GP G G +G +G +G G G GP GP+G+ G +GD G GE G +G++G KG++GS GPPG G PG +G G G +G+ G K
Sbjct: 1141 GEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAK 1242 HSP 7 Score: 68.1662 bits (165), Expect = 8.697e-10 Identity = 187/514 (36.38%), Postives = 225/514 (43.77%), Query Frame = 2
Query: 2525 GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVE------------GELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXX---------XXXXXXXXXXXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
G PG+ + G KG++G G SGNPGP G +G +G G G G++G+ GP+G G +G GR+G GP+G D GP G G G G G+ GS+G+ GL G G +G G PG PGD G G G G G G G G +GLIG TGA G +G GP G G G G+PG+KG KG+ G+ G G+ G G G G GL GGRGKPG G G+ G G G G GP G KG+ G GLPGP G GP G +G GPPG G G G G PG PG G +G G G G GE+G G G+ G G G G G++GP G G G + G G G GP GSRGL G G G +G R G +GS G G VG +G PG PG G G+RG+ G KG
Sbjct: 661 GDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGRKGHKGHPG---AAGHPGEQGQPGPEG---------------------------------------------------SPGAKGYPGRQGFPGPVG------DPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGL------------------PGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096 HSP 8 Score: 64.6994 bits (156), Expect = 9.590e-9 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ G RG G G+KG+ GP G+ G G G +G +G G+ GPRG PEG AG G G G G +G GN GD G VGP G GNPG+ G G G G GE
Sbjct: 1371 HPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGE 1479 HSP 9 Score: 63.1586 bits (152), Expect = 2.442e-8 Identity = 142/400 (35.50%), Postives = 160/400 (40.00%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---PGPKGETGLMGPIGPVGEDG 4039
G G G KG G G GE+G GP G G KG G G G G G GSRG G+ G G PG G G GV G G +G G PG GE GPP G G G G PGV G GDTG LGP G GP+G++G +G G PG KG+ G G+PG G G G G G G G G PG GKAG +G G G G G GD GPPG G G +G G +RGL G G+ G +G+ G G PG G G KG PG PGL G +G+ G+ PGP GE GLMG IG VGE G
Sbjct: 688 GPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGL------------------------------PGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVG------------------------------YPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGD------PGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPG------------------------------ARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPG 991 HSP 10 Score: 61.2326 bits (147), Expect = 9.884e-8 Identity = 204/589 (34.63%), Postives = 251/589 (42.61%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGK------------PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGD---------------VGPLGKTGLKGT------------RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGAS---GAEGQPGVKGTKGDTGI------------LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER------YLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G+RG GLPG PG+ GK G +G G G G+ G PG G G G GP G LG GD G GP G G KG + G G +GE G++G G +G G G G +GD GPLGK G KG+ G++G G G G+ G G +G+ G PG G G GP+G G+PG G G KG G GL G G PG G GP G+ G G G+PG+ G KGD G+ +G G G G G G G G RG PG +G+ G+ GP+G +G G QG G KG +GP G PG G G +G+ G G G G G GP G+ GLPG+ G QGP G G GE G +G G PG+ G+ G +G GP+G P G +GL G+ GEPG +G+ LKG +G PG G G KG+ PGPPG+TG G+ G PG +GE G G G G G
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMK------------------------------------GLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEG---------------DEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLG------------------------PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQG 1249 HSP 11 Score: 60.077 bits (144), Expect = 2.333e-7 Identity = 48/111 (43.24%), Postives = 57/111 (51.35%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---------PGYAGNPGIKGSRGPVGNQGRDG 2131
Y G G++G G G G G G RG G KG KGE G +G G G +G +G G+QG GPRG G +G EG+ G PGY G+ G G GPVG GR G
Sbjct: 1350 YPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRG 1460 HSP 12 Score: 58.9214 bits (141), Expect = 5.891e-7 Identity = 194/552 (35.14%), Postives = 240/552 (43.48%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ---GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKV---GEPGQKGERYLKGIKGSPGTIGAV---------GSKGEPGPPGLT---------------GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G PG G G G+PG +G G+ G G G G G+PGP+G RG G G G GS G+RG G G G+ G PG G GE+G GL G G +G GP G GD G LG G G +G G+ G G+ GL G +G Q GVSG+PG GD G + G G+ G G+PGP G+ G KG +G GP G G G+ GPPG G G +G+PG +G G G LGP G++ G G G G G+ G G G G++G G G PGR G +G GL G +G G G G G G G G GP GS G PG G G G G G G RG G G G+ G RGP+GP G +GS+GL G+V G PGQ G++ G +G G G + G+KG PG PG GP G G PG G++G+ G +GP+G GE
Sbjct: 696 KGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGR------------------------------------PGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSH---------------GLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDE---------GPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAG------------------------EQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGE 1163 HSP 13 Score: 56.225 bits (134), Expect = 3.819e-6 Identity = 47/103 (45.63%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ GA+G G G G+ GP G+ G +G G G GE QG GPEG G KG G QG GP G G KG G +G PG G PG G RG G G+ GE
Sbjct: 671 HDGAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGE---QGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGE 770
BLAST of Collagen type IV alpha 2 chain vs. UniProt/SwissProt
Match: sp|P02465|CO1A2_BOVIN (Collagen alpha-2(I) chain OS=Bos taurus OX=9913 GN=COL1A2 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.193e-31 Identity = 312/935 (33.37%), Postives = 415/935 (44.39%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGP---QGIRGARGQSGPTG---------------ELGSKGDRG---KFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLG---------KTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPG---------------SPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRI---------------GEAGPPGKTGASGAEGQP---------------------GVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGE------LGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGS---PGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFD---KVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDH--TQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRT-PGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
PG +GPSG PGK G G G G +G GP G +G GP QG++G +G+ GP G E G G+RG +FG GP G +GERG PG G GP GP G G +G PG G KG G++G G+ GP GP G G+ G G +TGL+G G G G+ G G +G+ GP G +G+ G SPG+ G E G G G GP G G PG G RG KG KG+ G +GPTG G G+ GPPG TG GA G+ G++G +GD G +G GE G GP G +G KG G G G G+ G G G G LG+ PG +GE G +G PGP+G +GP G G PG G G G G G G PG G G G G +GE G G+ GP G AG G +GP GP+G G G G G +GP G +G GP G +G+ G GEPG KG R L G+KG G G G G+ G PG GP G P+G G GP G G G+ GA GP G G G G G PG G G G G + G G + R+ + +S + ++ + + N+I+ + P G K+ A RTC D++L + + G Y+IDPN+G D+I+V C FS +TCI + + + N+ + K + + + G ++ + TQ+ F+R + + Q I + C S+ Y D E K A +L +G D + + R F T+ DGC +T + + +T S LPI+D D + LN+ +CF
Sbjct: 493 PGPKGPSGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGPTGPIGSRGPSGPPGPDG---------------NKGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGLRGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERG------EVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRSGETGASGPPGFVGEKGPSGEPGTAGPPGTPGPQGLLGAPGFLGL---PGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPVGAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQGAPGAVGPAG------PRGPAGPSGPAGKDGRIGQPGAVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSGGGYEF-------GFDGDFYRADQPRSPTSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPA-RTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG-ETCIRAQPEDIPVKNWYRNSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEET---GNLKKAVIL-------------------QGSNDVELVAEGNSR--FTYTVLVDGCSKKTNEWQKTIIEYKTNKPSRLPILDIAPLDIGGA-DQEIRLNIGPVCF 1363 HSP 2 Score: 75.0998 bits (183), Expect = 6.628e-12 Identity = 148/408 (36.27%), Postives = 172/408 (42.16%), Query Frame = 2
Query: 2864 RGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIG---LPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------------------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP 4015
RGL G G G +GP G +G GP G RG G G G+ GLMG P+G G PG+ G AG G G G+ G G IGP GA G G G PG G SG PG G KG G+ G RG G DG N+G QG G G+QG G +G GP G LPGP GT+G +GK G G+PG+ GL GPAG G +G GE G GP PG+ G G GP+GP G+ PG G G G G KG GL G +G PG+ G R G G+PG GA G +GE GP G GP G RG+PG +GE G GP
Sbjct: 403 RGLPGADGRAGVMGPAGSRGATGPAG------VRGPNGDSGRPGEPGLMG---PRGFPGSPGNIGPAGKEGPVGL---------------------------PGIDGRPGPIGPAGARGEPGNIGFPGPKGPSG---DPGKAGEKGHAGLAGARGAPGPDG------------------------NNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGER------------------GIPGEFGLPGPAGARGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGL---------PGERGAAGIPGGKGEKGETGLRGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGP 720 HSP 3 Score: 72.7886 bits (177), Expect = 3.003e-11 Identity = 152/421 (36.10%), Postives = 174/421 (41.33%), Query Frame = 2
Query: 2939 GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPI---GLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------------------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---------------PGPPGLTGP------------------QGKRGNPGPKGETGLMGPIGPVG 4030
G G G G +G GS G TG G RGP G SG PG PG G G G G G G GPVG+ G+ G G IGP GA G G G PG G S G PG G KG G+ G RG G D GN+G QG G G+QG G +G GP GLPGP GT+G +GK G G+PG+ GL GPAG G +G GE G GP PG+ G G GP+GP G+ PG G G G G KG GL G +G PG+ G R G G+PG GA G +GE PG G GP +G+RG GPKGE G +GP GPVG
Sbjct: 404 GLPGADGRAGVMGPAGSRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGL------------PGIDGRPGPIGPAGARGEPGNIGFPGPKGPS---GDPGKAGEKGHAGLAGARGAPGPD------------------------GNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGER------------------GIPGEFGLPGPAGARGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGL---------PGERGAAGIPGGKGEKGETGLRGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVG 758 HSP 4 Score: 72.7886 bits (177), Expect = 3.296e-11 Identity = 217/593 (36.59%), Postives = 262/593 (44.18%), Query Frame = 2
Query: 2489 GPPGTRGP---SGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAE---------------GQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQG---------------VEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPG---------------------KAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGL---DGKVGEPGQKGERYLK------------GIKGSPGTIGAVGSKGEPGPPGLTGPQGKRG------NPGPKGETGLMGPIGPVGEDGE 4042
GP G RGP SG PG+PG+ G G G G++GP G+ G G GI G G GP G G G+ G GP+GP+GD G+ G G G G +G G G G G G++G+ G KG GP GP G +G GP G G G GE GI G G G G+RG +G GE G+ G G G G GP G G KG+ G++G G G G +G PG+ GA+G G PG G +G G +G G G +G G G G G G G G G GP G +GE G +GP KGE GP+G GPVG +GPSG +G PGP G G G G G PG G K GL+GP G G G +GE G GPPG +G++GP+G G GP G G G +G G +G PG +G RGL G VGEPG G G+ G+PG G G+ G GPPG G G +G N GP G G GP GPVG G+
Sbjct: 425 GPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPSGDPGK------------------AGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGPTG---------------------PIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGLRGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGP---KGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRSGETGASGPPGF---VGEKGPSGEPGTAGPPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPVGAAGAPGPQGPVGPVGK 972 HSP 5 Score: 61.6178 bits (148), Expect = 7.823e-8 Identity = 50/105 (47.62%), Postives = 58/105 (55.24%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVG---TRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
Y G G G++GA G GP G VG RGE G G G G GPRGP G G++GD G G+ GPRG G KG G G PG AG+ G +G+ G VG G G
Sbjct: 948 YPGNAGPVGAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQGAPGAVGPAGPRG 1052 HSP 6 Score: 59.3066 bits (142), Expect = 3.663e-7 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G RG G G GP+G VG RG G +G++G+ G G +GP G+ G+KG G+QG G G G++G G+VGP AG G G GP G GR G+
Sbjct: 971 GKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQGAPGAVGP---AGPRGPAGPSGPAGKDGRIGQ 1068 HSP 7 Score: 54.6842 bits (130), Expect = 9.584e-6 Identity = 193/549 (35.15%), Postives = 229/549 (41.71%), Query Frame = 2
Query: 2516 GLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG------------RIGEAGPPGKTGASGAEGQPGV------------KGTKGDTGILGP---------------RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGD------RGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPV 4027
G PGKPG G+ G +GP+G G PG G+ G +G G G G KG G G +G G GE G G+ G RGL G +G VG GP G +G G +G G G G G G G G G GP G PG G AG GE G G G GP G G G+PG G G GV G GL GP G PG +GE GP G G SG +G+PG +G +G TG +GP RG G DG G +G G +G G G +G G+SG G G +G +G PG G +GP G GPVG G G+ G GP G G PG G GP G SG G+AGE+G RG PG GN G +GP G G+ +G +G G G PG +G L G G+ G G G +G PG GL GP G RG GP GE+G GP GP+
Sbjct: 143 GHPGKPGRPGERGVVGPQG------ARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGEN---------------------------------------GTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGP---VGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGRAGVMGPAGSRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGAR------------GEPGNIGFPGPKGPSGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGV------------------------QGGKGEQGPAGPPGFQG---LPGPAGTAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGPTGPI 604
BLAST of Collagen type IV alpha 2 chain vs. UniProt/SwissProt
Match: sp|Q80ZF0|CORA1_RAT (Collagen alpha-1(XXVII) chain OS=Rattus norvegicus OX=10116 GN=Col27a1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.364e-30 Identity = 313/890 (35.17%), Postives = 404/890 (45.39%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDG---KEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGV---RGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG----------------------------ASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPG------RKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGP---NGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKR--STRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIY--GDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGC-MYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
RG PG RG G G G DG ++GS G KG +GPRG+ G PG QG G RG SG G LG G G G +G G+ G +G G GPPG GP GP G G PG G G+ G+ GP GP GE+G+ RG G +G +GP+GPDG KGD G G G G +G+ G+KG EG G G G +G G+PGS G+ G G KG +G QG G G G G PG PGP+G +G +GP GAPGR+G G PG G GA G PG +G GD G G G+ G G G G +G G +G+PG G G GP+G +GE G +G PG R+G G GLPGP G G G +G G G +PG G+ G QG G G G G G RG PG+AG G +GP G G+ G GP G+ G G G GN G GS+G G GE G G L G KG PG IG G +G GPPGL G +G G PG G +GL GP G+ G G G GP GPPGP G G PG + + G+ R ++ S Q +D +F + ++N I+ I+ P G K++ AR C D+ ++ DG Y++DPN G D+IEV C F+ +TC+ + + + E A+SR QMNFL +S+ Q I C ++ G + S ++ + +V+ + G+ F + DGC ++ + F T D LPI+ + G L V CF
Sbjct: 1047 RGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGT------LGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDG------------NPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGL---PGPKGDRGSRGDWGLQGPRGPPGPRGRPGPPGPPWHPVQFQQDDLEAAFQTWMDAHGAV-RLEQGYSYPDQLMLDQGGEIFKTLHYLSNLIQSIKTPLG-TKENPARVCRDLMDCEQKMADGIYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPI--------------------TASKAEFAVSR-----------VQMNFLHLLSSEGTQHITIHCLNMTVWQEGPARPSARQAVRFRA------------------------WNGQVF-EAGGQ--FRPEVSMDGCKVHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSG-KQYRLEVGPACF 1854 HSP 2 Score: 83.5741 bits (205), Expect = 1.500e-14 Identity = 225/610 (36.89%), Postives = 274/610 (44.92%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPG---IDGKEGSIGPKGDL------------GPRGQSGNPGPQGIRGARGQSG------PTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---------KGDVGPLGKTGLKGTRGEVGIKGSEGKTGL---------------------------------MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---------AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAG---------------------LQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GPPG GP G+ GKPG + G G +GP+GD G G+ G PG G+ G++G+ G P GE G G G G G G+KG+RG G G PGP G G G G GD G G G PG +G+ G+ G KG GP GPDG KG VGP G+ G G +G G +G G G MG +GP G GEPG PGD+G+ G+ G G G QG G G G+ G GP G G+KGD G GP G G G+ GPPG TG G EG+PG +G KG G G +G QG LG +G G G G PG +GS G GP G G +G QG PG G G G+ Q D G+PG PG+ G +QG G G QG+ G G RG PG G+ G+ GP G G G G RG G G GP G G +G G+ G+ G PG+ G +G +G+ G G VG G G PG+ G G +G PG KGE+GL G +GP G+ G
Sbjct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core: 75.0998 bits (183), Expect = 6.633e-12 Identity = 194/545 (35.60%), Postives = 237/545 (43.49%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKV---GEPGQKGERYLKGIKGSPGTIGAV---------GSKGEPGPPGLT---------------GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G GP G PG G G++G GP GD GP+G G G G+ G G G G G G RG+ G G GD GERG PG G PG G G GV GLLG G++GP+G P G KG +G +G+ GLKG +GE G+ G G G G +G G+ G PG+ G G P G+ G KG +GL GP G G G+ GPPG G G +G+PG +G G G LGP G++ G G G G G+ G G G G++G G G PGR G +G GL G VG G G G G G G G GP GS G PG G G G G G G RG G G G+ G RGP+GP G +GS+GL G+V G PGQ G++ G +G G G + G+KG PG PG GP G G PG G++G+ G +GP+G GE
Sbjct: 718 GQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG---------------------------PPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPG------------------------------PMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDE---------GPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAG------------------------EQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGE 1172 HSP 4 Score: 72.0182 bits (175), Expect = 5.878e-11 Identity = 196/551 (35.57%), Postives = 251/551 (45.55%), Query Frame = 2
Query: 2498 GTRGPSGL---PGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGAS---GAEGQPGVKGTKGDTGI------------LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER------YLKGIKGSPGTIGAVGSKGE---------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G RGP GL PG+ G+ G G +G GD+G G G PGP+G++G G GE G KGD+G+ G G +GD G + G G G+ G G +G GP+G G+KG +G G G +G G++G G G G+ G G +G+ G PG G G GP+G G+PG G G KG G GL G G PG G GP G+ G G G+PG+ G KGD G+ +G G G G G G G G RG PG +G+ G+ GP+G +G G QG G KG +GP G PG G G +G+ G G G G G GP G+ GLPG+ G QGP G G GE G +G G PG+ G+ G +G GP+G P G +GL G+ GEPG +G+ LKG +G PG G G KG+ PGPPG+TG +G+ G PG +GE G G G G G+
Sbjct: 790 GERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGG---VGEPGLKGDKGEQGVPGVSGDPGFQ---------------------------------------GDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEG---------------DEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLG------------------------PPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQ 1259 HSP 5 Score: 67.781 bits (164), Expect = 1.149e-9 Identity = 49/109 (44.95%), Postives = 61/109 (55.96%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ G RG G G+KG+ GP G+ G G G +G +G G+ GPRG PEG+AG G+ G G G +G+ GN GD G VGP G GNPG+ G G G G GE
Sbjct: 1380 HPGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGE 1488 HSP 6 Score: 65.855 bits (159), Expect = 3.706e-9 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G+ G SG KGD GP G G +G +G +G G G GP GP+G+ G +GD G GE G +G++G KG+EG GPPG G++G G G+QG G++
Sbjct: 1150 GEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGIT---GVRGREGKPGSQGEKGQR 1248 HSP 7 Score: 65.4698 bits (158), Expect = 4.812e-9 Identity = 139/400 (34.75%), Postives = 163/400 (40.75%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---PGPKGETGLMGPIGPVGEDG 4039
G G G KG G G GE+G GP G G KG G G G G G GSRG G+ G G PG G G G+ G G +G G PG GE GPP G G G G PGV G GD G LGP G GP+G++G +G G PG KG+ G G+PG G G G G+ G PG PG G GP G +G +G G G GP G G++G G NGP G+ G G+RGL G G+ G +G+ G G PG G G KG PG PGL G +G+ G+ PGP GE GLMG +G VGE G
Sbjct: 697 GPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGL------------------------------PGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVG------------------------------YPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL---------------PGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGM---------------------KGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPG 1000 HSP 8 Score: 62.3882 bits (150), Expect = 5.305e-8 Identity = 181/526 (34.41%), Postives = 212/526 (40.30%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQ------SGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXX------------------XXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
G G GL G PG G++G G G G G+ G PGP+G GA+G GP G+ G KG RG G G G G G RGL G G G +G G GD G G GL G GE+G+ G G GL+G G G G PG G G+ G GE G KG KG+ G+ G +G PG G+ G G G GA G+PG G GD G L G G PG +G G+ GP G G G++G PG +G GP G GP G GP G G PG G PG+ G G G G++GE G+ G GP G G MG G G GIVG G RG GP G GP G+ GP GSRGL G G G +G R G +GS G G VG +G PG PG G G+RG+ G KG
Sbjct: 685 GNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPG---------------------------------------------SDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGL------------------------KGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSL---------------------GLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLE---------------GQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1105 HSP 9 Score: 58.9214 bits (141), Expect = 4.737e-7 Identity = 48/111 (43.24%), Postives = 55/111 (49.55%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---------PGYAGNPGIKGSRGPVGNQGRDG 2131
Y G G++G G G G G G RG G KG KGE G +G G G +G +G G+QG GPRG G +G EG G PGY G G G GPVG GR G
Sbjct: 1359 YPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRG 1469 HSP 10 Score: 57.7658 bits (138), Expect = 1.128e-6 Identity = 194/550 (35.27%), Postives = 232/550 (42.18%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGP------------DGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEP---GSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------KGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRG------EQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV---------------GSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
G GP G PG G+ G G +G G G +G+ G PG G G +G G G G G RGK GP G GDKG G G G G G G G+ GP+G G+ G RGL G G +GP G +G+ G G G+ GL G++GE G G G G G G G+ GEP G GD GV G G G +GS G G G G PG+PGP G +G KG G GP G G G G G+ G G GQPG +G G+ G G +G G G G G G +G +G G G G GP G GE G+ G G KG+LGP+G PG G G G PGL G G GP G G +G+ G G+ G G G G+ G GP GI G RG +GK G G+KG+R KG KG G +G + GS+G GP G G G +G PG G G G
Sbjct: 820 GALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGS---------------LGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGL---------------------IGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGV------------------------RGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKG 1309 HSP 11 Score: 56.225 bits (134), Expect = 3.397e-6 Identity = 47/103 (45.63%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ GA+G G G G+ GP G+ G +G G G GE QG GPEG G KG G QG GP G G KG G +G PG G PG G RG G G+ GE
Sbjct: 680 HDGAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGE---QGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGE 779 HSP 12 Score: 55.8398 bits (133), Expect = 4.639e-6 Identity = 105/333 (31.53%), Postives = 134/333 (40.24%), Query Frame = 2
Query: 3173 GVKGDIGLIGPTGAPG---RIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGP---PGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI------------KGSPGTIGAVGSKGEP---------------------------GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGED 4036
G KG++GL G G PG R G G PG G G +GQPG +G+ G G G +G G G+ GP+G G +G+ G PG GE G G+PG G G PG PG G +GP G G GE G GPPG+ G +G G GP+G PGPKG +GL G VGEPG KG++ +G+ KGS G G G++G+P GPPG GP+G +G PG +G G G +GP G++
Sbjct: 682 GAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPG------------------------PVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMG------------------------RPGFPGDFGERGP---PGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGY---------------------PGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDE 942 HSP 13 Score: 55.0694 bits (131), Expect = 7.371e-6 Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY---AGNPGIKGSRGPVGNQG 2122
G RG G +G G+ G G G G+ G G G G+ GP+GP G DIG +G GPRG G G EG +GPPG +G PG KG RG G+ G
Sbjct: 1499 GKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPG------DIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWG 1592 HSP 14 Score: 54.6842 bits (130), Expect = 9.981e-6 Identity = 44/105 (41.90%), Postives = 53/105 (50.48%), Query Frame = 2
Query: 1868 GDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---------------PGYAGNPGIKGSRGPVGNQGRDGEK 2137
G GP G VG G G G+KG+ G GP G +G+ G +G+ G++G+ GP G DG KGD G GP G G PGI G RG G G GEK
Sbjct: 1141 GPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEK 1245
BLAST of Collagen type IV alpha 2 chain vs. TrEMBL
Match: A0A5J4NUW8 (Collagen, type V/XI/XXIV/XXVII, alpha OS=Paragonimus westermani OX=34504 GN=DEA37_0001678 PE=4 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 1.064e-110 Identity = 399/905 (44.09%), Postives = 517/905 (57.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---------------------AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---------------------GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAG---------------GSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRA---QSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE--VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYG-DSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
RG PG RG G PG+PG++G EG G KGD GP G +G GP G+RG+ G +GP GELG KGD+G+ G G GDKG+RG PG+QG PG GP GP G+ GSPG+ G KG G PGP G GEKGVRGL+GR+G+ GPIG DGE GD G G G KG RG+ G +G +G G +G+ GPQGV+GEPG G GV G G G GE G G +G+ GP GA G GE G PGK G +G G PG+KG+KG+ GILGPRG QG G GP G G KG RGKPGRQG G +GP G+ G+ G Q GPPG+ G GPIGL GP G GP G G G G G G G G+PG PG G GP G SG G GE+G +GPPGIAG G G G +G G GEPG +KG+ G+PGT+G G KGE G G GP G++G GP+GE G GP GP G+DGE G G GP GPPGP G RG PG GD G GRPGP GQVK+ N PE R +R+ A Q+ D+N +F ++D I +++ R P G + + ARTC DI+L K + + Y+IDPNEGS +D+++V+C F ++ V+TC+ S QG L Y KP+ G++ WQ+ LR+ + +++PDLH+ Y DH+Q+N LR Q+ ++ QE+ FLCD + IYG + E++F YAT L+ H+ + +DL GERLG +MDKR+Y++ R ++ +EYDGC Y + G+S+K ++ET+DL++LPIIDF++ Y+ +G+S+L LNV ++C+
Sbjct: 782 RGMPGPRGAPGNPGRPGVEGVEGPQGDKGDAGPLGPTGPSGPVGLRGSPGPTGPPGELGPKGDQGRPGMPGSIGDKGDRGPPGAQGSPGVLGPAGPQGMPGSPGEPGSKGARGQPGPIGARGEKGVRGLIGRQGAHGPIGSDGETGDQGSPGLQGAKGDRGDTGEEGPQGPPGDVGAAGPQGVAGEPGEAGPPGVT---------------------GPKGIEGKVGEMGPIGPMGVQGPPGANGPRGEPGTKGVPGPDGPPGDVGPPGLTGAPGKVGNAGPPGLPGIKGSKGEPGILGPRGLQGPAGKAGPEGPIGPKGNRGKPGRQGQPGPAGPPGILGDPGFQGVPGIQGPPGPSGKPGPQGSQGPPGKDGVRGPIGLDGPFGEDGPPGPPGPAGAAGPQGPVGSAGETGAPGDPGSRGPPGPVGTDGEPGLPGPPGPEGPSGPTGPQGEQGFQGPPGIAGPKGNVGKQGAVGPT------------------------------GASGEPG------MKGVTGNPGTVGPTGPKGEQGSIGDPGPAGQQGERGPEGEIGPFGPRGPAGDDGEPGPQGRQGPPGPPGPMGPRGKPGQPGDPGPMGRPGPQGQVKVTNAPEPGLRRRRRAVSAQVEQTLEDLNLKIFQRIDAIHKRVRLARQPAGSSPNYPARTCKDIRLANKLARNDTYWIDPNEGSSRDTVKVKCNFYDDGRVETCVESTMDQGILATYMKPLPGDSEWQSQLRVINS-TKSPDLHT-YGDHSQVNMLRIQHRRASQELLFLCDGTAIYGLWDDRRHESEFDYATALLAHNGRMLDLRAGERLGFGLDHMDKRIYRNALQRADTSIIVEYDGCQYMSTGASTKIRVETSDLNVLPIIDFKVRSYDRQGLSSLSLNVGAVCY 1627 HSP 2 Score: 219.935 bits (559), Expect = 9.676e-54 Identity = 152/407 (37.35%), Postives = 212/407 (52.09%), Query Frame = 2
Query: 254 DGVVDLLTAVQISDKNIGTTAEEP-FCGNS----RRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRT--SDPLDI-SGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNN--DFNDVMMNQGPVKXXXXXXXXXXXXXXXXXXXXXXXXXNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGL------------------------TGPKGRSGDIGMQGLPGNK 1372
+G +DLL AV I +P FC S + A+ Y G+SL + +F K P +FSIL T + ++ +Q +F + + +LAV+ G ITL Y S + F + L +WHRI+ SV SV+LL+DC+ + S L R PL I G L+VLQ +G SF+GI+D LLL+ A+ C +Y+P CN FN+ M ++ EG++GR G+PG+PG+PG H+ V+PIP +N R+A FR+ ++++ +LKG RG QGM GLPG QGP+GY G KG+ G GD GF+GP GLRG G GP GR G DGE G++GL GP+G GDIG +G PG +
Sbjct: 56 EGSIDLLKAVSIDLAAPTDVIRQPGFCPPSDEQLQHTAYSYHRGSSLRVFATKIFADKLPTDFSILATVRLKSTGAQKLFDMVDGKQQALLAVSVGPIITLHYY--SQGKLHLVEFSYPLEVNRWHRISLSVKGDSVTLLVDCRVVQSKSLQRPIPVPPLAIPDGSTLHVLQTADGKNSFSGIVDRLLLIPNPEGAYDHCTVYSP-CNRVAYFNERMQSE-------------------------DEGRDGRSGIPGSPGIPGVASHVLVIPIPSFGKNEMSRMASFRSVVQQSVMMLKGIRGQQGMVGLPGIQGPVGYVGEKGEQGVVGDPGFMGPTGLRGPPGPDGPRGRPGVDGEVGTSGLPGAKGQPGLPGLPGLPGPKGHKGDIGPQGNKGDIGKRGAPGPR 434 HSP 3 Score: 112.464 bits (280), Expect = 8.794e-21 Identity = 209/563 (37.12%), Postives = 254/563 (45.12%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRI---------------------------------GEAGPPGK------TGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGPPG RG G PG PG G +G+ G KG+ G G G+ GP G G +G GP G GSKGD+ GP G TG +GER G+KG +G G G G GP G KG+ G +G+ G +G G+ G +G+ G G G +GP+G G PG G G G+ G G G +GP GP G G G PG G G+KG+ G +GPTG G + GEAG PG+ G GA GQ G +G+ G+ G+ GPRG G N G GVEG G QG G G LGP G GPVG G+PGP G G+ G G G PG+PG G +G G G QG G G GP PG G+ G RG GPIG G G RG G G GPIG+ G G +G G G G +G+ +G +G PG +GA G +G G PG GP G G G +G+ G MGPIGP+G G
Sbjct: 515 RGPPGARGLVGSPGLPGNPGPQGNAGAKGEPGATGPIGDTGPMGPPGYKGDRGPRGPAGSKGDQ---GPPGKTGVRGER------------------------------------------GDKGTKGERGNPGPRGSDGPVGIKGETGMVGEPGPRGLEGQKGAQGARGPAGYGGIQGPKGALGLPGPIGRTGEKGDPGPVGPLGPRGPPGPRGAPGPRGSPGNSGPVGMKGEDGPVGPTGVLGPVGPQGPRGVPGFAGGPGPVGLPGRPGPPGEIGERGEAGEPGQPGEVGPIGMVGAPGQTGEQGSPGERGMPGPRGAPG---------------------------NPGRPGVEGVEGPQGDKGDAGPLGPTGPSGPVGL------RGSPGPTGPPGELGPKGDQGRPGMPGSIGDKGDRGPPGAQGSPGVLGPAGPQGMPGSPGEPGSKGARGQPGPIGARGEKGVRGLIGRQGAHGPIGSDGETGDQGSPGLQGAKGDRGDTGEEGPQGPPGDVGAAGPQGVAGEPGEAGPPGVTGPKGIEGKVGEMGPIGPMGVQG 999 HSP 4 Score: 97.4413 bits (241), Expect = 2.987e-16 Identity = 235/570 (41.23%), Postives = 286/570 (50.18%), Query Frame = 2
Query: 2495 PGTRGP---SGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKG------VRGLLGRKGSVGPIGPDGEK------------GDVGPLGKTGLKGTRGEVGIKGSE------GKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP---RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKA---GLQGPAGGSGTQGEAGERGDRGPPGIAGN------------MGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGP---KGETGLMGPI------GPVGEDGE 4042
PG +G GLPG PG G +G IGP+G+ G G+ G PGP RG G+ GPTGE G G +G FGP GP G +G G G G G G G +G G G G G+ G GP+G G+ G RGL+G G G GP G GD GP+G G KG RG G GS+ GKTG+ G RG +G GE G+PG G +G G+KG+ G++ G PG G G G GA G G G++G KG G+ GP GE+G GP+GP+G +G G RG PG +GS GNSGP G++GE G GP G G +GP G G G +G G G PG PG G+ G+ G G PG PG+ G+ G G +G QG GERG GP G GN G +G GP+G GP GP G G GP GP G GPKG +G G G G KG+R G +GSPG +G G +G PG PG G +G RG PGP +GE G+ G I GP+G DGE
Sbjct: 392 PGAKGQPGLPGLPGLPGPKGHKGDIGPQGNKGDIGKRGAPGP---RGTEGEVGPTGEPGPAGTQGSFGPVGPPGVRGSPGRVGPSGMKGEMGDAGAVGPPGPRGPPGPPGMDGPQGPRGLSGQPGSRGPPGARGLVGSPGLPGNPGPQGNAGAKGEPGATGPIGDTGPMGPPGYKGDRGPRGPAGSKGDQGPPGKTGVRGERGDKGTKGERGNPGPRGSDGPV------------------------------GIKGETGMV---GEPGPRGLEGQKGAQGARGPAGYGGIQGPKGALGLPGPIGRTGEKGDPGPVGPLGPRGPPGPRGAPGPRGSPGNSGPVGMKGEDGPVGPTGVLGPVGPQGPRGVPGFAGGPGPVGLPGRPGPPGEIGERGEAGEPGQPGEVGPIGMVGAPGQTGEQGSPGERGMPGPRGAPGNPGRPGVEGVEGPQGDKGDAGPLGPTGPSGPVGLRGSPGPTGPPGELGPKGDQGRPGMPGSIGDKGDRGPPGAQGSPGVLGPAGPQGMPGSPGEPGSKGARGQPGPIGARGEKGVRGLIGRQGAHGPIGSDGE 925 HSP 5 Score: 95.1301 bits (235), Expect = 1.376e-15 Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 2
Query: 1715 GSAGLPGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GS GLPGNPG QG+ G KG+ G +GP G+ G GPPGYKG RG RG +G+KGD GP G+ G RGE G KG KGE G GPRG +G G+KG+ G+ GE GPRG +G KG +G+ GP GY G G KG+ G G GR GEK
Sbjct: 525 GSPGLPGNPGPQGNAGAKGEPGATGPIGDTGPMGPPGYKGDRGPRGPAGSKGDQGPPGKTGVRGERGDKGTKGERGNPGPRGSDGPVGIKGETGMVGEPGPRGLEGQKGAQGARGPAGYGGIQGPKGALGLPGPIGRTGEK 665 HSP 6 Score: 69.3218 bits (168), Expect = 1.074e-7 Identity = 149/414 (35.99%), Postives = 183/414 (44.20%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQ---------GLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTI---GAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP------IGPVGEDGE 4042
+G +G++G G GP+G GEKG+ G +G G G G G G +G G G G G SG PG+ G G+PG PG G KG KGDIG G G G+ G GP G G G G+PG GT+G G +GP G + G+ G +G G+ G G RG PG G G GP+G+ G+ G +GPPG +G +G SPGLPG G QG AG G G G GD GP G G G RGP GP G G+ GP G G+ G+ G+ G KGER G +GS G + G G GEPGP GL G +G +G GP G G+ GP GP+G GE
Sbjct: 329 RGQQGMVGLPGIQGPVGYVGEKGEQGVVGDPGFMGPTGLRGPPGPDGPRGRPGVDGEVGTSGLPGA------------------------KGQPGLPGLPGLPGPKGHKGDIGPQGNKGDIGKRGAPGPRGTEGEVGPTGEPGPAGTQGSFGPVGPPGVRGSPGRVGPSGMKGEMGDAGAVGPPGPRGPPGPPGMDGPQGPRGLSGQPGSRGPPGARGLVG------------------------------------SPGLPGNPGPQGNAGAKGEPGATGPIGDTGPMGPPGYKGDRGPRGPAG------------------SKGDQGPPGKTGVRGERGDKGTKGERGNPGPRGSDGPVGIKGETGMVGEPGPRGLEGQKGAQGARGPAGYGGIQGPKGALGLPGPIGRTGE 664 HSP 7 Score: 65.0846 bits (157), Expect = 1.886e-6 Identity = 47/100 (47.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
GARG+ GS G G+ GP G G +GE G G G+ G GP G +G G +G G +G+ GP GK G +G+ G G G GNPG +GS GPVG +G G
Sbjct: 519 GARGLVGSPGLPGNPGPQGNAGAKGEPGATGPIGDTGPMGPPGYKGDRGPRGPAGSKGDQGPPGKTGVRGERGDKGTKGERGNPGPRGSDGPVGIKGETG 618
BLAST of Collagen type IV alpha 2 chain vs. TrEMBL
Match: A0A4Z2DJT0 (Collagen alpha-1(V) chain isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_000274 PE=4 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 4.263e-105 Identity = 405/849 (47.70%), Postives = 517/849 (60.90%), Query Frame = 2
Query: 2528 KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---------GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ---GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEP---GQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQ---SFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE--VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGD-SELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
KPG++G EG G KG G G SG GP G+RG RG GP+G+ G+KGD G+ GP G GDKG+RG PG GPPGP GP GP G+ GS G+ G KG G PGP G GEKGV+GL+G+ G GP G DGE+GD G G G KG RGE G +GS G+ G GS GPQG+ GEPG G+AGV G KG +GK G GP GP GVQG PG+ GPRGE G+KG IG GP G PG +G AG PGK G GA G PG+ G KG+ G G RGEQG G +GP G KG+KG G+PGRQG G++GP G+ GE G+Q G PG GE G GLPG G G G +G G G G G G G G PG AG GP G G + G G G+RGPPGI G GQ GP GP G G G PG G +G GK+G P G KGE KG+ G+PGT+G G KGE G G GP GK+G G G+ G GP GP G++GESG GP+G GPPG G RG G SGD G G+ GP GQVKI N E RYKRS Q + IN +F +VD + K++ R+ TG + + ARTC D++L K + + Y+IDPNEGS +D+I +C F ++ V+TC+ S QG L Y KP+ ++ WQ+ LR+ + + DLH+ Y H+Q+N LR Q+ + QE+EFLCD + IYG + + ++ F AT L+ H+ + +DL+ GERLGP + +MDKR Y++ R ++T+EYDGC Y T G+++K +ET DL +LPIIDF++ +++ + +L +NV ++C+
Sbjct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core: 86.2705 bits (212), Expect = 6.391e-13 Identity = 166/389 (42.67%), Postives = 195/389 (50.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV------------------SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG---------------------------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
RGPPG G +G G G+ GK G GP G G +G G+PGPQG +G RG+ G G G +G G GPQG G+ GE G G GP G G G PG G GV G+PG GP GE G++G++G +G VG GP G G G +G G G+ G G+KG +GK G G +G QG G+PGS G G+ GE G QG QG GP G G+ G PG G G+ GV+GDIG G TG G G+ G PG G+ G G PG+ G +G G GP GEQGL GP G G KG G G PG G G SGP+GV G G GPPG KGE G IG PGP G
Sbjct: 597 RGPPGPVGETGEKGVQGLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGE------IGNAGVPGPKGIEGKVGPPGPPGPAGVQGSPGRSGPRGEPGIKGVIGAEGPVGFPGPVGLAGAPGKMGVPGAPGSPGLPGLKGEQGKPGARGEQGAQGAIGPAGPKGMKGMLGRPGRQGQPGSAGPPGIVGEPGVQGAQGPMGPIGAPGLPGEPGSAGLPGKDGVRGDIGPEGIFGDDGPPGPPGPVGVPGVQGPPGTAGETGPIGDPGDRGAPGSIGSPGERGPPGIMGAEGQVGPQGPEGEQGLQGPPGDSGPKGNIGKIGSPGPVGPKGESGPKGVGGNPGTVGPPGPKGEQGSIGDPGPSG 979 HSP 3 Score: 73.559 bits (179), Expect = 4.774e-9 Identity = 71/173 (41.04%), Postives = 88/173 (50.87%), Query Frame = 2
Query: 1031 VLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLT------------------------GPKGRSGDIGMQGLPGNKXXXXXXXXXXXXXXXXXXXXXXASGRPGDVGPPGE 1477
++P+P +N R+A FRT++++ +LKG+RG QGM GLPG QGP G RG KGD G G+ GFIGP GLRG G GP GR G DGE G++GL GP G GDIG++G PG GR G+VGPPGE
Sbjct: 1 MMPLPSFGKNELSRMASFRTTVQQAVMMLKGSRGQQGMIGLPGIQGPPGPRGSKGDQGLIGEPGFIGPTGLRGPPGPVGPRGRPGVDGEVGASGLAGPKGLPGLPGLPGLPGHRGHKGEIGPSGIKGDIGLRGPPG------------------------PYGRDGEVGPPGE 149 HSP 4 Score: 71.633 bits (174), Expect = 2.074e-8 Identity = 224/641 (34.95%), Postives = 270/641 (42.12%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGP---------------------TGELGSKGDRGKFGP---QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGS---------------------VGPIGPDGEKGD---VGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ------------GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---------------AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGEL------------------------GIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE------RGDRGPPGIAGNMGQRGPN---GPIGIVXXXXXXXXX---------XXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGPPG G G PG G G +G+ GPKG+ G G+ G+ GP G G +G GP GE GSKG+RG GP +GP G KGE G IGE G RGL G+KG+ G IG GEKGD +GPLG +G G RG G +G+ G++G +G +G + G G G+PG AGV G G G G G+ G G GE G+ G+IG IG G PG++GE G PGK G G EG G KGTKG G GP G GL G++G G G PG +G G GP G G+ G QG PG KG GP PGPVG +G G GL GK GL+GP G G QG+ G +GDRG PG G+ GQ+G GP G+VG G G G +GP GP G G +GS G G GEPG KG +G G PG +G G+ G+ PG PGL G +G++G PG +GE G G IGP G G
Sbjct: 219 RGPPGVTGLPGSPGMTGNPGPQGNAGPKGEPGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGE---------------------------------------PGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKGDEGPTGPTGPPGAAGPQGPRGTPGFAGVP---------GPPGLPGRPGPVGLLGDRGEPGEPGIPGEIGPIGMVGVPGQVGEQGAPGERGPPGPRGPQGIPGKPGVEGIEGVQGEKGTKGAPGPSGPSGPVGL------RGTRGPPGPSGDPGAKGDEGRRGPHGSLGDKGDRGPPGPHGPPGPIGPVGPQGLPGSQGEPGDKGARGP---PGPVGETGEKGVQ---------------------GLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGEIGNAGVPGPKGIEGKVGPPGPPGPAGVQGSPGRSGPRGEPGIKGVIGAEGPVGFPGPVGLAGAPGKMGVPGAPGSPGLPGLKGEQGKPGARGEQGAQGAIGPAGPKG 781 HSP 5 Score: 70.8626 bits (172), Expect = 3.621e-8 Identity = 226/611 (36.99%), Postives = 263/611 (43.04%), Query Frame = 2
Query: 2486 RGPPGTR---GPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIR------------------------------------GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLG------------KTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDA---GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGIL---------GPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGL---PGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR------GPPGIAGNMGQRGPNGPIG---------IVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL---------------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
RGPPG G G PG+PG G +G +GP G G RG G GP G++ GARG G TG GS G G GPQG G KGE GL G G GP+G G KGD GP G TG++G RGE G KG G G GS GP G+ GEPG G+ G+ G+KG +G +GS G G G +G G G G G KGD G IGP G G +G G PG GA G G G KG +G TG GPRG G G GP G G G G + G+ G G PG GE+GPIG+ PG VG G G+ G PGP G G G G G G+ G+ G +G G SG G G RG R G PG G+ G+RGP+G +G GP GP G GP G G G PG KG+RG G VGE G+KG + L +G +GSPG GA G +GEPG G TG QG G+PGP+G G G IG G
Sbjct: 132 RGPPGPYGRDGEVGPPGEPGSAGLQGPMGPVGPAGLRGLPGRSGPNGLKGEFGDSGEIGPPGPQGPVGPPGVPGPQGIRGLTGKPGARGPPGVTGLPGSPGMTGNPGPQGNAGPKGE------------------------------------------------PGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGEPGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKGDEGPTGPTGPPGAAGPQGPRGTPGFAGVPGPPGLPGRPGPVG---------------LLGDRGEPGEPGIPGEIGPIGMVGVPGQVGEQGAPGERGPPGPRGPQGIPGKPGVEGIEGVQGEKGTKGAPGPSGPSGPVGLRGTRGPPGPSGDPGAKGDEGRRGPHGSLGDKGDRGPPGPHGPPGPIGPVGPQGLPGSQGEPGDKGARGPPGPVGETGEKGVQGLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGEIGNAG 679 HSP 6 Score: 67.781 bits (164), Expect = 2.769e-7 Identity = 138/294 (46.94%), Postives = 161/294 (54.76%), Query Frame = 2
Query: 2879 RKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGIL---------GPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRG 3724
+G G IGP G KGD+G G G G GEVG G G GL G GP G +G G PG +G NG KGE G G GP GP G G PG PGP+G +G+ G G GP TG PG G G PG G +G +G+PG+ G GDTG + GPRG G G G G G++G RG+ G +G G GP+G EG +GI+G PG GELGP GL G G GP G G PG PG G G G +GSPG G G GP G SG G G G RG PG +G +G +G
Sbjct: 113 HRGHKGEIGPSGIKGDIGLRGPPGPYGRDGEVGPPGEPGSAGLQGPMGPVGPAGLRGLPGRSGPNGLKGEFGDSGEIGPPGPQGPVGPPGVPGPQGIRGLTGKPGARGPPGVTGLPGSPGMTGNPGPQGNAGPKGEPGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGEPGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKG 406
BLAST of Collagen type IV alpha 2 chain vs. TrEMBL
Match: A0A4Z2DJH5 (Collagen alpha-1(V) chain isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_000274 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 2.064e-104 Identity = 405/849 (47.70%), Postives = 517/849 (60.90%), Query Frame = 2
Query: 2528 KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---------GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ---GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEP---GQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQ---SFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE--VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGD-SELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
KPG++G EG G KG G G SG GP G+RG RG GP+G+ G+KGD G+ GP G GDKG+RG PG GPPGP GP GP G+ GS G+ G KG G PGP G GEKGV+GL+G+ G GP G DGE+GD G G G KG RGE G +GS G+ G GS GPQG+ GEPG G+AGV G KG +GK G GP GP GVQG PG+ GPRGE G+KG IG GP G PG +G AG PGK G GA G PG+ G KG+ G G RGEQG G +GP G KG+KG G+PGRQG G++GP G+ GE G+Q G PG GE G GLPG G G G +G G G G G G G G PG AG GP G G + G G G+RGPPGI G GQ GP GP G G G PG G +G GK+G P G KGE KG+ G+PGT+G G KGE G G GP GK+G G G+ G GP GP G++GESG GP+G GPPG G RG G SGD G G+ GP GQVKI N E RYKRS Q + IN +F +VD + K++ R+ TG + + ARTC D++L K + + Y+IDPNEGS +D+I +C F ++ V+TC+ S QG L Y KP+ ++ WQ+ LR+ + + DLH+ Y H+Q+N LR Q+ + QE+EFLCD + IYG + + ++ F AT L+ H+ + +DL+ GERLGP + +MDKR Y++ R ++T+EYDGC Y T G+++K +ET DL +LPIIDF++ +++ + +L +NV ++C+
Sbjct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core: 219.935 bits (559), Expect = 1.089e-53 Identity = 173/444 (38.96%), Postives = 235/444 (52.93%), Query Frame = 2
Query: 248 YRDGVVDLLTAVQISD-KNIGTTAEEPFCGNSRRK----AFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPF-EFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNR-TSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFN-DVMMNQGP--VKXXXXXXXXXXXXXXXXXXXXXXXXXNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLT------------------------GPKGRSGDIGMQGLPGNKXXXXXXXXXXXXXXXXXXXXXXASGRPGDVGPPGE 1477
++D + DLL V+I + T + FC + A+ Y G+ L ++ +F FP++FSIL T + +Q +F + ++ LA++ G I L YR S S + F + D +WHRIA S+ SV+LLIDC+ I S LNR ++ L + G LYVLQD G ASF+G ++ LL+V A+ QC IY+P +D + M Q P ++ GQ G G GPKG KGQ G++GR G+PG PG+PG P HI ++P+P +N R+A FRT++++ +LKG+RG QGM GLPG QGP G RG KGD G G+ GFIGP GLRG G GP GR G DGE G++GL GP G GDIG++G PG GR G+VGPPGE
Sbjct: 54 FKD-ITDLLQLVEIDKLDSYEVTRQYGFCPTQLTENPNTAYSYHRGDKLKLPTEKVFPSSFPQDFSILTTIRLRHEQNQKIFDVIDETGQSQLAISVGNSIVLYYRL-SGDSLSIVEFTNVKMNDLRWHRIALSIKGDSVTLLIDCKVITSKLLNRPLTENLKFNKGVLYVLQDKTGQASFSGAIEQLLIVPSPGGAYDQCSIYSPCSESDKTIEEMQLQEPYIYEQTRNFGQPGEKGEVGPKGEKGQPGRDGRSGIPGAPGLPGVPSHILMMPLPSFGKNELSRMASFRTTVQQAVMMLKGSRGQQGMIGLPGIQGPPGPRGSKGDQGLIGEPGFIGPTGLRGPPGPVGPRGRPGVDGEVGASGLAGPKGLPGLPGLPGLPGHRGHKGEIGPSGIKGDIGLRGPPG------------------------PYGRDGEVGPPGE 471 HSP 3 Score: 91.6633 bits (226), Expect = 1.767e-14 Identity = 166/389 (42.67%), Postives = 195/389 (50.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV------------------SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG---------------------------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
RGPPG G +G G G+ GK G GP G G +G G+PGPQG +G RG+ G G G +G G GPQG G+ GE G G GP G G G PG G GV G+PG GP GE G++G++G +G VG GP G G G +G G G+ G G+KG +GK G G +G QG G+PGS G G+ GE G QG QG GP G G+ G PG G G+ GV+GDIG G TG G G+ G PG G+ G G PG+ G +G G GP GEQGL GP G G KG G G PG G G SGP+GV G G GPPG KGE G IG PGP G
Sbjct: 919 RGPPGPVGETGEKGVQGLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGE------IGNAGVPGPKGIEGKVGPPGPPGPAGVQGSPGRSGPRGEPGIKGVIGAEGPVGFPGPVGLAGAPGKMGVPGAPGSPGLPGLKGEQGKPGARGEQGAQGAIGPAGPKGMKGMLGRPGRQGQPGSAGPPGIVGEPGVQGAQGPMGPIGAPGLPGEPGSAGLPGKDGVRGDIGPEGIFGDDGPPGPPGPVGVPGVQGPPGTAGETGPIGDPGDRGAPGSIGSPGERGPPGIMGAEGQVGPQGPEGEQGLQGPPGDSGPKGNIGKIGSPGPVGPKGESGPKGVGGNPGTVGPPGPKGEQGSIGDPGPSG 1301 HSP 4 Score: 81.6481 bits (200), Expect = 1.766e-11 Identity = 224/641 (34.95%), Postives = 270/641 (42.12%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGP---------------------TGELGSKGDRGKFGP---QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGS---------------------VGPIGPDGEKGD---VGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ------------GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---------------AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGEL------------------------GIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE------RGDRGPPGIAGNMGQRGPN---GPIGIVXXXXXXXXX---------XXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE------PGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGPPG G G PG G G +G+ GPKG+ G G+ G+ GP G G +G GP GE GSKG+RG GP +GP G KGE G IGE G RGL G+KG+ G IG GEKGD +GPLG +G G RG G +G+ G++G +G +G + G G G+PG AGV G G G G G+ G G GE G+ G+IG IG G PG++GE G PGK G G EG G KGTKG G GP G GL G++G G G PG +G G GP G G+ G QG PG KG GP PGPVG +G G GL GK GL+GP G G QG+ G +GDRG PG G+ GQ+G GP G+VG G G G +GP GP G G +GS G G GEPG KG +G G PG +G G+ G+ PG PGL G +G++G PG +GE G G IGP G G
Sbjct: 541 RGPPGVTGLPGSPGMTGNPGPQGNAGPKGEPGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGE---------------------------------------PGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKGDEGPTGPTGPPGAAGPQGPRGTPGFAGVP---------GPPGLPGRPGPVGLLGDRGEPGEPGIPGEIGPIGMVGVPGQVGEQGAPGERGPPGPRGPQGIPGKPGVEGIEGVQGEKGTKGAPGPSGPSGPVGL------RGTRGPPGPSGDPGAKGDEGRRGPHGSLGDKGDRGPPGPHGPPGPIGPVGPQGLPGSQGEPGDKGARGP---PGPVGETGEKGVQ---------------------GLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGEIGNAGVPGPKGIEGKVGPPGPPGPAGVQGSPGRSGPRGEPGIKGVIGAEGPVGFPGPVGLAGAPGKMGVPGAPGSPGLPGLKGEQGKPGARGEQGAQGAIGPAGPKG 1103 HSP 5 Score: 78.9518 bits (193), Expect = 1.358e-10 Identity = 227/614 (36.97%), Postives = 265/614 (43.16%), Query Frame = 2
Query: 2486 RGPPGTRGPSGL---PGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIR------------------------------------GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLG------------KTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDA---GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGIL---------GPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGL---PGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR------GPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXS---------RGLDGKVGEPGQKGERYL---------------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGPPG G G PG+PG G +G +GP G G RG G GP G++ GARG G TG GS G G GPQG G KG GL G G GP+G G KGD GP G TG++G RGE G KG G G GS GP G+ GEPG G+ G+ G+KG +G +GS G G G +G G G G G KGD G IGP G G +G G PG GA G G G KG +G TG GPRG G G PG G G GP G+ G+ G G PG GE+GPIG+ PG VG G G+ G PGP G G G G G G+ G+ G +G G SG G G RG R G PG G+ G+RGP+G +G G GP G GP GP+GP+G G GS RG G VGE G+KG + L +G +GSPG GA G +GEPG G TG QG G+PGP+G G G IG G G
Sbjct: 454 RGPPGPYGRDGEVGPPGEPGSAGLQGPMGPVGPAGLRGLPGRSGPNGLKGEFGDSGEIGPPGPQGPVGPPGVPGPQGIRGLTGKPGARGPPGVTGLPGSPGMTGNPGPQGNAG------------------------------------------------PKGEPGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGEPGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKGDEGPTGPTGPPGAAGPQGPRGTPGF---------------AGVPGPPGLPGRPGPVGLLGDRGEPGEPGIPGEIGPIGMVGVPGQVGEQGAPGERGPPGPRGPQGIPGKPGVEGIEGVQGEKGTKGAPGPSGPSGPVGLRGTRGPPGPSGDPGAKGDEGRRGPHGSLGDKGDRGPPGPHGPPGPIGPVGPQGLPGSQGEPGDKGARGPPGPVGETGEKGVQGLIGKPGLRGPTGADGEQGDQGSPGPQGAKGDRGEPGEQGSTGQQGAAGSPGPQGMVGEPGEIGNAGVPG 1004 HSP 6 Score: 73.9442 bits (180), Expect = 4.306e-9 Identity = 138/294 (46.94%), Postives = 161/294 (54.76%), Query Frame = 2
Query: 2879 RKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGIL---------GPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRG 3724
+G G IGP G KGD+G G G G GEVG G G GL G GP G +G G PG +G NG KGE G G GP GP G G PG PGP+G +G+ G G GP TG PG G G PG G +G +G+PG+ G GDTG + GPRG G G G G G++G RG+ G +G G GP+G EG +GI+G PG GELGP GL G G GP G G PG PG G G G +GSPG G G GP G SG G G G RG PG +G +G +G
Sbjct: 435 HRGHKGEIGPSGIKGDIGLRGPPGPYGRDGEVGPPGEPGSAGLQGPMGPVGPAGLRGLPGRSGPNGLKGEFGDSGEIGPPGPQGPVGPPGVPGPQGIRGLTGKPGARGPPGVTGLPGSPGMTGNPGPQGNAGPKGEPGLTGEPGDTGPVGASGYKGDRGPRGLPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGEPGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKG 728 HSP 7 Score: 64.6994 bits (156), Expect = 2.584e-6 Identity = 156/445 (35.06%), Postives = 187/445 (42.02%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK---------GIKGSPGTIGAV---------------------------------------GSKGEP---GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGED 4036
+G +G++G G GP GP G KGD G +G+ G G TGL G GP G G PG G+ G + G G +G G G G+ G G G G G+KGDIGL GP G GR GE GPPG+ G++G +G G G G G+ G G GL G G G G G +G G G G G +G+ G+ G +GPPG GLPG SPG+ G G QG AG G G GE GD GP G +G G RGP G G G G G G+ G GE G KGER L GIKG PG IG + G KG+P GP GL+GP G RG PGP+G G GP+G G++
Sbjct: 355 RGQQGMIGLPGIQGPPGPRGSKGDQGLIGEPGFIGP------------TGLRGPPGPVGPRGRPGVDGEVGAS---GLAGPKGLPGLPGLPGLPGHRGHKGEIGPSGIKGDIGLRGPPGPYGRDGEVGPPGEPGSAGLQGPMGPVGPAGLRGLPGRSGPNGLKGEFGDSGEIGPPGPQGPVGPPGVPGPQGIRGLTGKPGARGPPGV------TGLPG------------------------------SPGMTGNPGPQGNAGPKGEPGLTGEPGDTGPVGASGYKGDRGPRG------------------LPGAKGAQGAAGLTGVRGDRGEKGSKGERGLPGPRGSEGPVGIKGEPGIIGELGPRGLEGQKGNEGPRGSPGYPGGPGPKGTVGPAGGIGSPGEKGDPGHIGPLGLSGPVGPRGAPGPRGAPGQSGPVGFKGDE 730 HSP 8 Score: 64.3142 bits (155), Expect = 3.163e-6 Identity = 49/103 (47.57%), Postives = 60/103 (58.25%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNK---GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G RG GS G+ G+ GP G +G G+VG +G +GE G+QGP G G G G IG G GP+G+ G K G+ G+VGPPG G G G GP G QG G
Sbjct: 1205 GDRGAPGSIGSPGERGPPGIMGAEGQVGPQGPEGEQGLQGPPGDSGPKGNIGKIGSPGPVGPKGESGPKGVGGNPGTVGPPGPKGEQGSIGDPGPSGKQGEMG 1307
BLAST of Collagen type IV alpha 2 chain vs. TrEMBL
Match: A0A3R7GIF4 (Collagen alpha-1(XXVII) chain B OS=Clonorchis sinensis OX=79923 GN=col27a1b PE=4 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 3.311e-100 Identity = 386/895 (43.13%), Postives = 488/895 (54.53%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGE---AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------------------GEAGERGD-------RGP---PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPP---------------GLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRST---RAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE--VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYG--DSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
RG G RGP G PG+PG++G EG G KGD+GP G +G GP G+RG+ G GP GE+G KGD+G+ G QG GDKG+RG G QGPPG GP GP G+ GSPG+ G KG G PGP G GEKG+RGL+G+ G+ GP G DGE GD+G G G KG RG+ G +G G TG +G+ G QG GE G PG AGV G KG +GK G GP GPVGVQG PG GPRGE G K GL GP G PG +G +G PGK G G G PGV+G KG+ G+LG RG QG+ G GP G +G GIQG PGR+G GP G PG G G G G GP G G G G G PG G G+ GP G G G AGE G +GP PG GN G+ G GP+G G +GL G G PG G G G GS G+PGPP G GP G G PGP+G G GP G G G+ PG G+ G GRPGP GQVK+ N PE R +RST R Q+ DIN +F +VD + + + R P G ARTC DI+L K + + Y+IDPNEG D+I+V+CVF ++ V+TC+ S QG L Y KP+ G++ WQ+ LR+ + ++ P+LH Y DH+Q+N LR Q+ ++ QE+EFLCD + IYG DS+LSE KF AT L+ H+ + +DL GERLG +MDKR+Y++ R ++T+EYDGC Y G+++K ++ETTDL +LP+IDF++ ++ G+S+L LNV S+C+
Sbjct: 797 RGLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSGPVGLRGSPGPVGPPGEVGPKGDQGRPGMQGSIGDKGDRGPHGPQGPPGVVGPTGPQGLPGSPGEPGSKGARGQPGPIGVRGEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGPQGSKGDRGDRGEEGLPGPTGDIGATGLQGAPGESGEPGPAGVAGPKGIEGKAGPPGPEGPVGVQGSPGPNGPRGEPGTK---GLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGVRGPKGEPGLLGSRGLQGI------------------------PGKPGPDGPQGPKGIQGRPGRQGRPGPAGPPGIAGHPGLQGIPGPQGPLGPPGDVGPQGSTGLPGRDGGRGIMGPDGAVGEDGPPGPPGPAGTPGPQGPVGSAGETGHVGETPGLQGPVGQPGTKGNPGKPGGTGPVG------------------------NPGDQGLKGVKGNPGTVGPT---------GPQGEQGSIGDPGPPGETGEVGGEGDVGPQGPRGPTGDDGEPGPQGRQGPAGPPGQKGPRGK---------------------PGQPGEPGPMGRPGPQGQVKVTNAPENGLRRVRRSTNPVREQTLEDINARIFQRVDTLYKRARLARHPQGTRIKYPARTCKDIRLVNKFAKNDTYWIDPNEGISGDTIKVQCVFYDDGRVETCVESTMDQGMLTTYMKPLAGDSEWQSQLRVMNS-TKPPNLHD-YGDHSQVNMLRIQHRRASQELEFLCDGTAIYGRWDSKLSEP-KFDVATALLAHNGRMLDLGSGERLGFGLEHMDKRIYRNTLDRIDTSITVEYDGCQYMNRGAATKIRVETTDLEVLPVIDFKVRSFDQSGLSSLSLNVGSVCY 1607 HSP 2 Score: 215.312 bits (547), Expect = 3.117e-52 Identity = 148/374 (39.57%), Postives = 211/374 (56.42%), Query Frame = 2
Query: 233 TQALSYRDGVVDLLTAVQISDKNIGTTAEEP-FC---GNSRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRT-SDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNP-DCNNDFNDVMMNQGPVKXXXXXXXXXXXXXXXXXXXXXXXXXNGRD---GLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPK 1327
TQ+ + DLL AV I +P FC ++ A+ Y G L ++D +F FP++FSIL T + + ++F + + LA+T G ITL Y + F L +W+RI+ S+ S++LL++C+ + S L R+ SDP + G LYV+Q +G ASFTG++D LL++ A+ C ++P + +N F D M + E G G PG KG G KG++G+ GRD G+PG+PG PG P HI V+P+P +N R+A FRT ++++ +LKG+RG QGMTGLPG QGP GY G KG+ G GD GF+GP GL+G G GP GR G DGE G++GL G K
Sbjct: 39 TQSQDSTEVAYDLLKAVTIDSAAPTDVIRQPGFCPPADGNQNTAYSYHRGGQLQVEADRVFPATFPRDFSILATVRLKTAAEGELFELVDPEGKRRLALTLGSTITLDYY--GEGQMRKVRFTQSLVPYRWYRISLSIKGDSITLLVNCRVVQSQMLVRSPSDPTGLESGTLYVMQHKDGKASFTGVVDRLLIIPTPEGAYNHCTTFSPCEKSNSFYDSMQAEEVETTEWQYGIPGAPGEKGEPGLKGEKGQPGRDGRSGIPGSPGSPGVPSHILVMPLPSFGKNELSRMASFRTMVQQSVMMLKGSRGQQGMTGLPGIQGPPGYVGEKGEQGHTGDPGFMGPSGLQGPPGPNGPRGRPGLDGEVGASGLPGSK 410 HSP 3 Score: 102.834 bits (255), Expect = 6.337e-18 Identity = 195/554 (35.20%), Postives = 240/554 (43.32%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---GDVGPLGKTGLKGT---RGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGA------------------------------PGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
RGPPG RGP G PG PG G++G++G KG+ G G G+ GP G G +G GP G +G KGD+G G G G++GE+G KG G G +GS GP+G GE G+ GP G G KG RG G GS+G G +G GP G +GE G PG G G +G G G+ GP G G G G G G G G IG +GP G+ PG G G G G GA GQ G +G G+ G+ GPRG QG N G GVE G +GP G KG++GPIG GP G G G G GPPG + G +G G G QG G++GDRGP G G G GP GP G+ G+PG GS+G G+ G G +GE+ ++G+ G PG G G GE G G GPQG +G+ G +GE GL GP G +G G
Sbjct: 530 RGPPGERGPQGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLGPPGYKGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGA------------------------------------------KGEPGNAGPRGSDGPLGSKGENGMPGEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRGMPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGLPGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQG---------------------------NPGRPGVE---GFEGPQGDKGDVGPIGPTGPSGPVGLRGSPGPVGPPG------------------EVGPKGDQGRPGMQGSIGDKGDRGPHGPQGPPGVVGPTGPQGL------------------PGSPGEPGSKGARGQPGPIGVRGEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGPQGSKGDRGDRGEEGLPGPTGDIGATG 975 HSP 4 Score: 90.1225 bits (222), Expect = 5.609e-14 Identity = 81/142 (57.04%), Postives = 95/142 (66.90%), Query Frame = 2
Query: 1712 QGSAGLPGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
QGS GLPGNPGQQG++G KG+ G G G+ G GPPGYKG RG RG G KGD G G+ G RGE G KG KGE G GPRG +G G KG+ G+ GE GPRG +G KG++G G G+ G+ G KG+ GP G GR GEK
Sbjct: 539 QGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLGPPGYKGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGMPGEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEK 680 HSP 5 Score: 71.633 bits (174), Expect = 1.919e-8 Identity = 140/383 (36.55%), Postives = 166/383 (43.34%), Query Frame = 2
Query: 2921 GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQG---VSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGN---------------MGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP 4015
G GP G TGL G RG G +G +G GL G+ G QG V GEPG+PG G +G G G KG +G GLIGP G G G+ G G+ G GA+G+PG G +G G LG +GE G+ G G G +G GN G +G G +G QGP G G GPIG G G GP G G GP G G G G G G G G +GP G +G G G +G RG PG G +G RG G G+ G G G VG PGQ GE+ G +G G G G+ G PG G GPQG +G+ GP G TG GP
Sbjct: 516 GPQGPRGLTGLPGLRGPPGERGPQGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLGPPGY------------------------KGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGM------------PGEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRGMPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGL------------------------PGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSGP 838 HSP 6 Score: 70.0922 bits (170), Expect = 6.038e-8 Identity = 144/392 (36.73%), Postives = 172/392 (43.88%), Query Frame = 2
Query: 2900 IGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ---GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGN---------------MGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
+GP G G GP G TGL G RG G +G +G GL G+ G Q GV GEPG+PG G +G G G KG +G GLIGP G G G+ G G+ G GA+G+PG G +G G LG +GE G+ G G G +G GN G +G G +G QGP G G GPIG G G GP G G GP G G G G G G G G +GP G +G G G +G RG PG G +G RG G G+ G G G VG PGQ GE+ G +G G G G+ G PG G GPQG +G+ GP G TG GP+G
Sbjct: 509 VGPPGMLGPQGPRGLTGLPGLRGPPGERGPQGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLGPPGY------------------------KGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGM------------PGEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRGMPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGL------------------------PGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSGPVG 840 HSP 7 Score: 65.0846 bits (157), Expect = 1.850e-6 Identity = 152/484 (31.40%), Postives = 187/484 (38.64%), Query Frame = 2
Query: 2894 GPIGPDGEKGDVGP------------------------------------------LGKTGLKGTRGEV------------------GIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGD------TGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------------------------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSR---GLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNP------GPKGETGLMGPIGPVGEDG 4039
G +GP G KGD+GP +G G+KG G+V G +G G TGL G RGP G G GSPG G G +G++G+ G GAPG +G++GP G G G G G+ G KGD TG+ G RGE+G G GN+GP+G +G LG +G G GE GP G+ GP G G G G G G +G G +G G GE+GD GP G+ G+ G GP GPIG VGP G RG PG +G GP+G PG G G G+ GEPG GE G+ G+PG G G+ GE G G GPQG G P GP+G+ G +GPIGP G G
Sbjct: 429 GDVGPQGNKGDIGPRGPIGPRGRTGEVGPVGEPGPPGLQGPMGPPGPPGVRGLPGSMGPGGMKGEMGDVGIMGPPGPRGPVGPPGMLGPQGPRGLTGLPGLRGPPGERGPQGSPGLPG---------------------------------NPGQQGNVGVKGEPGAPGLVGDSGPLGPPGYKGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAK---------------------GEPGNAGPRGSDGPLGSKGENGMPGEPGPRGMEGPKGNQGGRGAA---------------------GFVGSQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRGMPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGLPGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSG 837
BLAST of Collagen type IV alpha 2 chain vs. TrEMBL
Match: A0A183ADB6 (Fibrillar collagen NC1 domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS4951 PE=4 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 5.736e-100 Identity = 386/888 (43.47%), Postives = 498/888 (56.08%), Query Frame = 2
Query: 2528 KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------TGAPGRIGEAGPPGKTGASGAEGQPG------------------------VKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGP------------------------AGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRA---QSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE--VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSE-LSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
KPG++G EG G KGD+GP G G GP G+RG G +G GE G KG++G+ G QG GDKGERG PG QGPPG GP GP G+ GSPG+ G KG G PGP G GEKGVRG G++G+ GP+G DGE GD G G G KG RG++G +G G G +G+ GPQG G+PG+ G AG G KGV+G G +GP G+PG G G PG GA+GAEG PG +KG KGD GP GE+GL G G GPQG +G G +G PGR+G+ GP G PG +G G G G GPPG +G G G +G PG G G GP G +G G G+ G+RGPPG G++G+ G G G GP GP G PG GP G +G PGPKG+ G G G G GE +KG+ G+PGT+G +G KGE G G GP GK+G GP+GE G GP GP G+DGE+G G GP GPPGPPG RG PG GD G GRPGP GQVK+ N PE R +RS Q+ ++N +F +VD + + + R PTG ++ ARTC DI+L K + + Y+IDPNEG+ D+I +C+F ++ V+TCI S G L Y KP+ G++ WQ+ LR+ + + PDLH+ Y DH+Q+NFLR Q+ + QE EFLCD + IYG E +F AT LMTH+ + +DLS GERLG +MD+RVY++ R +T+EYDGC Y G+S+K K+ET+DL +LPIIDF++ ++ G+S++ LNV ++C+
Sbjct: 756 KPGVEGFEGPQGEKGDVGPAGPPGPNGPVGLRGTAGPAGAPGEPGPKGEQGRAGTQGSIGDKGERGPPGPQGPPGVVGPAGPQGMPGSPGEPGSKGARGQPGPIGERGEKGVRGEAGKQGARGPVGADGEIGDQGSPGPQGTKGDRGDIGEQGPTGPQGDVGAAGPQGAPGQPGAVGPAGPK------------------------------GPKGVEGKAGPMGPEGPIGVQGSPGANGPRGEPGSKGATGAEGPPGLAGPVGTPGGPGKMGNPGPPGMPGLKGLKGDQ---GPPGERGLH---------------------GPQGEPGPQGPKGTKGNRGRPGRQGQHGPAGPPGVMGEPGHQGIPGPRGPPGPAGDMGPQGSIGPPGKDGFRGGIGPNGPFGEDGPPGPPGPAGTPGPQGPVGAAGEAGSVGDPGNRGPPGPVGSVGEPGLPGAAGPEGPVGPPGPPGEQGPQGNVGLPGPKGNVGKPGPTGPIGLPGEPGMKGVTGNPGTVGPIGPKGEQGSSGDPGPPGKQGERGPEGELGPPGPRGPAGDDGEAGPQGRQGPSGPPGPPGPRGKPGQVGDPGPMGRPGPQGQVKVTNAPEPGLRRRRRSASTYPEQTLEELNAKIFQRVDSLHKRARLARHPTGTSRQYPARTCKDIRLANKFARNDTYWIDPNEGANTDAINAKCIFYDDGRVETCIESEMDPGILATYVKPLPGDSEWQSQLRVLNSTT-TPDLHA-YGDHSQVNFLRIQHRSASQEFEFLCDGTAIYGKWNGKRNEPEFDAATALMTHNGRMLDLSTGERLGHGLEHMDRRVYRNSLSRLDTIITVEYDGCQYMNKGASTKLKVETSDLDVLPIIDFKVRSFDKHGLSSISLNVGAVCY 1587 HSP 2 Score: 225.328 bits (573), Expect = 2.499e-55 Identity = 152/387 (39.28%), Postives = 214/387 (55.30%), Query Frame = 2
Query: 239 ALSYRD-GVVDLLTAVQISDKNIGTTAEEP-FC---GNSRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAK-SEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNR-TSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFN--DVMMNQGPVKXXXXXXXXXXXXXXXXXXXXXXXXXNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNK 1372
L YR V+DLL+AV IS + + +P FC G A+ Y G +L ++ +F F +FSILIT + + L S+ +F + + N LAV G I L Y ST + P L +WHRI FSV SV+LL+DC SM L R + ++ + G LYVLQD G +FTG+++ LL++ A++ C Y+P C+ N D+M + + + G++GR+G+PG+PG+PG H+ ++P+P +N R+A FR+ ++++ +LKG RG QGMTGLPG QGP G G KGD G GD GF+GP GLRG G GP GR G DGE G++GL G KG+ G G+ GLPG K
Sbjct: 3 TLVYRSQTVIDLLSAVSISSADPTEVSLQPGFCAPPGIVANTAYSYHRGGNLRVPAEKVFPDDFTSDFSILITMRLKQQLRSERLFELVDSNQKTRLAVDVGPSIKLIYGLDGSTQTLEFPAR--LVTHRWHRIGFSVKGDSVTLLLDCSVQQSMALRRPLTGRMNWANGTLYVLQDSTGKPAFTGVVERLLIIPSPEGAYEHCSTYSP-CDKMINIDDLMQLE----------------EETQEVRYANFGRDGRNGIPGSPGLPGVASHVLLMPLPSFGKNEMSRMASFRSMVQQSVMMLKGGRGQQGMTGLPGIQGPPGLVGEKGDQGVIGDPGFMGPTGLRGPPGPNGPRGRPGVDGEVGASGLPGSKGQPGMPGLPGLPGPK 370 HSP 3 Score: 92.8189 bits (229), Expect = 7.069e-15 Identity = 83/143 (58.04%), Postives = 96/143 (67.13%), Query Frame = 2
Query: 1709 VQGSAGLPGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+ GSAGLPGNPG QG +G KG+ G +GP G+ G GP GYKG RG RG GAKGD G G+ G RG+ G KG KGE G G RG +G GVKG+ G+ GE GPRG +G KG++G G GY G G KGS GPVG GR GEK
Sbjct: 483 LPGSAGLPGNPGPQGSVGPKGEPGATGPIGDNGPMGPAGYKGDRGPRGPPGAKGDQGNPGKTGVRGDRGEKGSKGERGNPGARGSDGPIGVKGEPGMVGEPGPRGLEGPKGNQGPRGAAGYQGAQGPKGSVGPVGPIGRHGEK 625 HSP 4 Score: 66.6254 bits (161), Expect = 6.767e-7 Identity = 72/193 (37.31%), Postives = 88/193 (45.60%), Query Frame = 2
Query: 2507 GPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGL------KGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAG 3067
G +GLPG PG +GS+GPKG+ G G G+ GP G G +G GP G G+KGD+G G G GD+GE+ G KG RG G +GS GPIG GE G VG G GL +G RG G +G++G G +G GP G GE G PG G
Sbjct: 485 GSAGLPGNPG---PQGSVGPKGEPGATGPIGDNGPMGPAGYKGDRGPRGPPGAKGDQGNPGKTGVRGDRGEK------------------------------------------GSKGERGNPGARGSDGPIGVKGEPGMVGEPGPRGLEGPKGNQGPRGAAGYQGAQGPKGSVGPVGPIGRHGEKGDPGMPG 632 HSP 5 Score: 64.3142 bits (155), Expect = 3.219e-6 Identity = 63/148 (42.57%), Postives = 75/148 (50.68%), Query Frame = 2
Query: 3599 SPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
S GLPG G QG G G G G GD GP G AG G RGP GP G G G G G G +G +G G+ G PG +G G+KG PG +G G +G GP G GP+G G G +G G +GP+GP+G GE
Sbjct: 486 SAGLPGNPGPQGSVGPKGEPGATGPIGDNGPMGPAGYKGDRGPRGPPGA---------KGDQGNPGKTGVRGDRGEKGSKGERGNPGARGSDGPIGVKGEPGMVGEPGPRGLEGPKGNQGPRGAAGYQGAQGPKGSVGPVGPIGRHGE 624
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Cavefish
Match: col27a1b (collagen, type XXVII, alpha 1b [Source:NCBI gene;Acc:560145]) HSP 1 Score: 137.502 bits (345), Expect = 2.705e-32 Identity = 282/905 (31.16%), Postives = 381/905 (42.10%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE------LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEG---KTGLMGSRGPQGVSG---EPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTK--------------------------------GDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE---------RGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI------KGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDK-------VDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS 5014
G +G GLPG PGI G+ G G GD+GP GQ+G GP+G G G G GE +G G+ G G +G G GERG+PG QG P + G G G+ G G +G G PG +G GE ++G G G G GPDG KG+ G LG G G +GE+G+KG EG GL+G RGP+G G E G PG+ G G +G G G E G G +G GP G G IG PPGK G G G G +G + GD G +G RG++G G G G G+ G RGK G G GN GP+G QGP G KG+ GP G G G SG G G+ G G G G +GP G PG+ G +G GP G +G QG GE G GPPG+ G+ G GP G G+ G GP G RG+ G +G G++G+ +KG +G PG +G G K GPPG GP G +G GP+G G G IGPVG G Q +N G++ + + + D++ + D+ + ++N I I+ P G +++ AR C D+ ++ DG Y+IDPN G D+IEV C F+ +TC+ + +S+ M V QMNF+ +S++ Q I C ++ + S + T + + I G + + KDE DG ++T +F+ T D ++LPI+D +N K S L V +CFS
Sbjct: 39 GDKGIQGLPGMPGIRGRPGPQGFPGDIGPPGQNGPEGPKGEPGIMGNVGMLGERGLVGFIGPVGETGLLGEKGHPGTPGERGEPGPQGIPVSSAVIGETGEPGARGFPGIQGPSGPPGAKGIPGEP-IQGEPGHDGEAGRSGPDGAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGEKGSKGHQGHLGMTG---------------------EVGDLGPVGFPGPKGNRGTIGFVVPPGKMGMQGDPGLSGYEGHQGPQGPIGPPGPKGAKQGEQGDDGKIEGPAGPPGDIGPVGHRGDRGESGDPGYPGQIGVDGQRGKAGAPGLPGNPGPRGT------QGPKGSKGDQGPKGKKGVPGESGSRGSSGSVGLSGPKGVVGREGPEGLPGMDGLSGKDGPKGIAGEQGNDGEVGLPGNSGPHGQTGPPGLRGSQGSFGPKGERGLAGETGPIG------------------KRGVPGGMGNQGKQGDTGVKGQPGDPGEQGFPGILGIFGPK---GPPGDFGPSGIQGPKGPQGLMGREGTIGPVGIIGP--------------SGYPGPQGDKGNRGETGPPGPRGPQGPPKNGELGAAFQVIFDSYSALRSDMDLPMLDQGTEIFKTLHYLSNLIYSIKNPLG-TQENPARMCRDLLDCEQRMNDGTYWIDPNLGCSSDTIEVTCNFTGGGQTCLRPL---------------------------TVSKL----EMGVGLIQMNFIHLLSSEAVQLITIHCLNVPVWA-TAASRPPSASNSVRFKTWNGQMIQAG---------GLIQPDLVKDE--------CWMTDGRWHQT-----QFQFVTQDPNLLPIVDV-LNLPITKPGSNYHLEVGPVCFS 824 HSP 2 Score: 96.2857 bits (238), Expect = 1.574e-19 Identity = 180/544 (33.09%), Postives = 221/544 (40.62%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDG------------------KEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSE---GKTGLMGSRGPQGVS---GEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNP---GPKGETGLMGPIGPVGEDG 4039
GPPG GP G G+PGI G + G +G KG G G+ G PGPQGI + G TGE G++G G GP GP G KG G+P ++G G G G GPDG KG+ G LG G G +GE+G+KG E G GL+G RGP+G GE G PG+ G KG +G +G+ G G G +G GP G G G PG G +GD G+ G G Q G QG +G+ I+GP G G++GP+G G G G PG PG+ G+ G G +G G G G RG G G+ G +GP G G+ G G RG G +G GP G G +G GL G G G+ G KGI G G G VG G GP G TGP G RG+ GPKGE GL G GP+G+ G
Sbjct: 66 GPPGQNGPEGPKGEPGIMGNVGMLGERGLVGFIGPVGETGLLGEKGHPGTPGERGEPGPQGIPVSSAVIGETGEPGARGFPGIQGPSGPPGAKGIPGEP-------------------------------------------IQGEPGHDGEAGRSGPDGAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGEKG---------------------------------SKGHQGHLGMTGEVGDLGPVGFPGPKGNRGTIGFVVPPGKMGMQGDPGLSGYEGHQ--------------GPQGPIGPPGPKGAKQGEQGDDGK--IEGPAGPPGDIGPVGHRGDRGE------------------------SGDPGYPGQIGVDGQRGKAGAPGLPGNPGPRGTQGPKGSKGDQGPKGKKGVPGESGSRGSSGSVGLSGPKGVVGREGPEGLPGMDGLSGKDGP---KGIAGEQGNDGEVGLPGNSGPHGQTGPPGLRGSQGSFGPKGERGLAGETGPIGKRG 490 HSP 3 Score: 65.4698 bits (158), Expect = 4.745e-10 Identity = 110/343 (32.07%), Postives = 139/343 (40.52%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVG 3517
GP G RG G G PG G+ G G +G G G GNPGP+G +G +G SKGD QGP G KG G G+ G G +G G +G++GR+G G G DG G GP G G +G GEVG+ G+ +G G GP G+ G GS G G E+G+ G+ G IG G PG +G G G TG G G PG +G G GI GP+G G + GP G++G G QG GR+G +GP+G+ GP G
Sbjct: 331 GPVGHRGDRGESGDPGYPGQIGVDGQRGKAGAPGLPGNPGPRGTQGPKG---------SKGD------QGPKGKKG------------------------------VPGESGSRGSSGSVGLSGPKGVVGREGPEGLPGMDGLSGKDGPKGIAGEQGNDGEVGLPGN---SGPHGQTGPPGLRGSQGSFGPKG---------------------------------ERGLAGETGPIGKRGVPGGMGNQGKQGDTGVKGQPGDPGEQGFPGILGIFGPKGPPG---------------------------DFGPSGIQGPKGPQGLMGREGTIGPVGIIGPSG 565 HSP 4 Score: 61.2326 bits (147), Expect = 9.906e-9 Identity = 108/293 (36.86%), Postives = 134/293 (45.73%), Query Frame = 2
Query: 3176 VKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAG---GSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGI--VXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G++GL G G PG G+ G G G G G+PG +G GD +GP G+ +GP+G +GE GI G G GE G +G GPVG G G G PG PG+ G GP G S GE GE G RG PGI +GP+GP G + + +G+PG G G G G KG +G G GE G+KGE LKG +G PG G VG +G G PG G +GK G G KG G +G G VG+ G
Sbjct: 22 FEGEVGLPGEPGEPGFQGDKGIQGLPGMPGIRGRPGPQGFPGD---IGPPGQ------------------------------NGPEGPKGEPGIMGNVGMLGERGLVGFIGPVGE------------------TGLLGEKGHPGTPGERGEPGPQGIPVSSAVIGETGEPGARGFPGI------QGPSGPPGAKGIPGEPIQGEPGHDGEAGRSGPDGAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGEKGSKGHQGHLGMTGEVGDLG 257 HSP 5 Score: 55.8398 bits (133), Expect = 4.863e-7 Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVG 2113
GA+G +G GA+G+HG G++G +G+ +G G+ G+ G RGPEG G G+ G GE G +G G+ G G VG G G PG KG+RG +G
Sbjct: 182 GAKGEKGDLGAEGEHGEKGEIGLKGK---EGPPGDPGLVGVRGPEGKPGKIGERGKPGEKGSKGHQGHLGMTGEVGDLGPVGFPGPKGNRGTIG 272 HSP 6 Score: 55.0694 bits (131), Expect = 8.368e-7 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G RG G +G GP G G GE ++G G G G GP+G G KGD+G +GE G +G+ G KG EG G PG G G +G G +G +G+ GEK
Sbjct: 138 GEPGARGFPGIQGPSGPPGAKGIPGEP-IQGEPGHDGEAGRSGPDGAKGEKGDLGAEGEHGEKGEIGLKGKEGPPGDPGLVGVRGPEGKPGKIGERGKPGEK 238 HSP 7 Score: 54.299 bits (129), Expect = 1.155e-6 Identity = 61/172 (35.47%), Postives = 74/172 (43.02%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSG------------NPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV 2974
PG GP G G PG+ G +GS GPKG+ G G++G N G QG G +GQ G GE G G G FGP+GP GD G G G KG +GL+GR+G++GP+G G G GP G KG RGE
Sbjct: 450 PGNSGPHGQTGPPGLRGSQGSFGPKGERGLAGETGPIGKRGVPGGMGNQGKQGDTGVKGQPGDPGEQGFPGILGIFGPKGPPGDFGPS---------------------------------------GIQGPKGPQGLMGREGTIGPVGIIGPSGYPGPQGD---KGNRGET 579
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Cavefish
Match: col1a1a (collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]) HSP 1 Score: 128.257 bits (321), Expect = 3.875e-29 Identity = 298/922 (32.32%), Postives = 375/922 (40.67%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPG---IDGKEGSIGPKGDLGPRG---QSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGP---QGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVG------------------PIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG---ASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXX---------XXSPGLPGKAGLQGPAGGSGTQGEA------------------------GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT---------IGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPV---GEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYK--RSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQ---QGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVD-HTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSK--FKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
PG +G +G PGKPG + G+ G+ GP G G RG + G PGP G G+RG G G G+KG+ G G QGP G +G GE+G GL G KG G G GE G GP+G TG +G GE G G+ G G G G G +G G PGD G G+ G G G+ G GP G G G KG +G G G TG PG G GPPG G GA G G +G KG+ G GP G G G GP G+ G KG G G GS+G GPQG+ G+ GI G PG++GE G GLPGP G G G G G G G G G G+PG G AG G AG G +GE G+RG+ GP G AG MG GP GP G G G GE G+ GER +KG +G G G G G GP G GP G G PG G +GL GPIGP G GE G AGP GP GPPGPPG G D G I P E + ++ R+ A D + + + ++ +I+ IR P G K+ ARTC D+K+ G+Y+IDP++G +D+I+V C E +TC+ + Q Y K + + W +G S D + Q+ FLR ++++ Q I + C S+ Y D K A +L + I R F ++ DGC T G+ K +TT S LPIID D G+ V +CF
Sbjct: 630 PGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQG------------------------------------------MPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDTGAKGDAGAPGAAGATGAPGPQGPVGATGP------KGARGAAGPPGATGFPGAAGRVGPPGPAGNSGPPGAPGPSGKEGPKGNRGETGPAGRPGEIGAAGPPGAPGEKGTPGAEGAPGSSGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGPGGPGGERGPPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGAAGAKGDRGETGAAGAPGAPGPPGAPGPIGPAGKTGDRGESGPAGPAGAMGPAGPRGPSGPA---------------------------GARGDKGETGEAGERGMKGHRGFTGMQGPPGPPGPSGESGPAGSSGPAGPRGPSGSAGTPGKDGMSGLPGPIGPPGPRGRSGEIGPAGPPGPPGPPGPPGPSGGGFDIGF--------------IAQPQEKAPDPFRHFRADDANVMRDRDLEVDTTLKSLSQQIESIRSPDGTKKNP-ARTCRDLKMCHPDWKSGEYWIDPDQGCNQDAIKVYCNM-ETGETCVYPSQSDIPQKNWYTSKNIKEKKHVWFGEAMTDGFQFEYGGEESKPEDVNIQLTFLRLMSTEASQNITYHCKNSIAYMD---QASGNLKKALLLQGSNEIEIRAEGNSR---------------------FTYSVTEDGCTSHT-GAWGKTVIDYKTTKTSRLPIIDIAPMDVGAP-NQEFGIEVGPVCF 1434 HSP 2 Score: 82.4185 bits (202), Expect = 3.833e-15 Identity = 219/554 (39.53%), Postives = 265/554 (47.83%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---------------PGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGD---KGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV---------------GIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGA---EGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELG---PIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQ---KGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGP 4024
G PG +G +G+ G+ G G +G GP G+ G RG G PG +G GA G SGP G G +G G GP+G TG+ GE G PGS+G G G GP G G+ G G G G PGP G G+ GV G G KG+ G G GE+G +G +G G G G+V G +G G G G GPQG +GEPG PG+ G+ G G G G G G GE+G G G +G G+PG G G G++GASGA +G PG++G G+ G G G +G G G G+ G G G G QG G G G G G +GPPG +GE G P G GP G G +G G PG G G AG G G+ G G QGP G +G +G G G G G G G+ GP GP G GP G GP G GPKG+RG G G PG+ G G KG+PG GA GS G PGP G+ G +G G PG +GE G G GP
Sbjct: 421 GAPGAKGEAGVKGESGAPGVQGPPGPAGEEGKRGARGEPGAAGGRGPPGERGAPGARGFPGADGASGPKGAPGERGGPGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGL------------PGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDTGAKGDAGAPGAAGATG---APGPQGPVGATGPKGARGAAGPPGATGFPGAAGRVGPPGPAG---------NSGPPGAPGPSGKEGPKGNRGETGPAGRPGEIGAAGPPGAPGEKGTPGAEGAPGSSGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGP 950 HSP 3 Score: 68.9366 bits (167), Expect = 5.489e-11 Identity = 196/516 (37.98%), Postives = 232/516 (44.96%), Query Frame = 2
Query: 2597 GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRI---------------GEAGP---------PGKTGASGAEGQPGVKGTKGDTGILGP---RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRK---GELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPG------------LTGPQGKRGNPGPKGETGLM 4009
GN G G GA+G++G GE G+ G +G GP G G +G RG+PG+ G GP G G G RG G G+ GP G GE+ G VGP G TG G GE G+ GS+G TG GS GP G +G G G G G G G +G G G G +G G+ G GE+GV G IG+ G G G + GE GP PG GA+G G+PG +G G+ G GP RG++G G G G G G RG PG G+ G G G G G QGPPG + GE G GLPG G G G GA G G G AG G G+ G GP G +G +G GERG+ G PG AG G G +G G G G G G G G G G G + G VG G KG R G G+ G GA G G PGP G GP+G RG GP G G +
Sbjct: 415 GNTGEAGAPGAKGEAGVKGESGAPGVQGPPGPAGEEGKRGARGEPGAAGGRGPPGERGA---------------------------PGARGFPGADGASGPKGAPGERGGPGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQ------GDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDTGAKGDAGAPGAAGATGAPGPQ---GPVGATGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNSGPPGAPGPSGKEGPKGNRGETGPAGRPGEI 894 HSP 4 Score: 65.0846 bits (157), Expect = 6.895e-10 Identity = 151/393 (38.42%), Postives = 184/393 (46.82%), Query Frame = 2
Query: 2936 LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR------------------KGELGPIG------LPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G+ G G +GE G+KG G G+ G GP G G+ G+ G+ G G +G G++G+ G G G G G G GE+G G +G G TG PGR GE G PG G +G+ G PG G G TG G G G GP+G G G+ G G G G G G +GV G +G+ G PG+ +GE GP G LPGP G + G PGK G QG G +G G +G RGDRG PG +RG GP G VG G G G G G G G G++G G G PG++G L G+KG G GA G+ G GPPG G QG +G PG G G G GP GE GE
Sbjct: 417 TGEAGAPGAKGEAGVKGESGAPGVQGPPGPAGEEGKRGARGEPGAAGGRGPPGERGAPGARGFPGADGASGPKGAPGERGGPGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGAT---------------------------GEPGKPGEQGLPGEAGATGPSGSRGDRGFPG------ERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGE 776 HSP 5 Score: 62.003 bits (149), Expect = 5.974e-9 Identity = 217/591 (36.72%), Postives = 256/591 (43.32%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGD------------------------LGPRGQSGNPGPQGIRGARGQSGPTGELG------------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPG---------------LPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAV------------------------GSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG++G +G PG PG DGK G+ GP G G G++G PG +G+ GA G +G G+ G G+RG+ GP GP G +G GP G G PG G +G+ G G GP G +G RG G +G+ GP GP G +G G G G KG G G G++G GL G G +G +G PG GD G G KG G G GP G G +KG G G +GPTGA GPPG+ G SGA G G G G G G +GE G G G G+ G G G PG QG G +GP+G G G G G G G +G PGP G SGP G G G G G G+ GP G PG PG G G +G G QG AG+RG G PG G G G GP G G GP G G GP GP+G PG G G G+ G PG +G G G+ G G G +GE GP G G G G GP G G G G GE GE
Sbjct: 519 PGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQG---------------LPGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQG------------DKGEPGAAGPVGPTGA------RGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDTGAKGDAGAPGAAGATGAPGPQGPVGATGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNSGPPGAPGPSGKEGPKGNRGETGPAGRPGEIGAAGPPGAPGEKGTPGAEGAPGSSGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGPGGPGGERGPPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGAAGAKGDRGETGAAGAPGAPGPPGAPGPIGPAGKTGDRGESGPAGPAGAMGPAGPRGPSGPAGARGDKGETGEAGE 1076 HSP 6 Score: 62.003 bits (149), Expect = 6.779e-9 Identity = 201/566 (35.51%), Postives = 233/566 (41.17%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPK---GDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVG------------------PIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTG---ASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXX---------XXSPGLPGKAGLQGPAGGSGTQGE------------------------AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT---------IGAVGSKGEPGPPGLTGPQGKRGNPG 3985
+GP G G GLPG G G+ G G + G+ G G SG+ G +G G RG GP G +GS+G G G G G+ G G G G PG QG GE+G GL G KG G G GE G GP+G TG +G GE G G+ G G G G G +G G PGD G G+ G G G+ G GP G G G KG +G G G TG PG G GPPG G GA G G +G KG+ G GP G G G GP G+ G KG G G GS+G GPQG+ G+ GI G PG++GE G GLPGP G G G G G G G G G G+PG G AG G AG G +GE G+RG+ GP G AG MG GP GP G G G GE G+ GER +KG +G G G G G GP G GP G G PG
Sbjct: 618 QGPAGPPGFQGLPGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESG---------------------------ASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDTGAKGDAGAPGAAGATGAPGPQGPVGATGP------KGARGAAGPPGATGFPGAAGRVGPPGPAGNSGPPGAPGPSGKEGPKGNRGETGPAGRPGEIGAAGPPGAPGEKGTPGAEGAPGSSGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGPGGPGGERGPPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGAAGAKGDRGETGAAGAPGAPGPPGAPGPIGPAGKTGDRGESGPAGPAGAMGPAGPRGPSGPA---------------------------GARGDKGETGEAGERGMKGHRGFTGMQGPPGPPGPSGESGPAGSSGPAGPRGPSGSAGTPG 1123 HSP 7 Score: 60.8474 bits (146), Expect = 1.388e-8 Identity = 216/633 (34.12%), Postives = 255/633 (40.28%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIG------PKGDLGPRGQSGNPG------------PQGIRGARGQSGPTG------------------------------------ELGSKGDRGKFGPQGP---------------TGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------------VGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEG---------------QPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPG---------------TIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP---IGPVGEDGE 4042
RGP G +G G PG PG+ G +G G KGD GP G G PG P+G+ G RG++GP G E+G++G RG GPQG G+ G G PG +G PG G G G G G G G G PGP+G GE G G G G G G G +G GP G+ G +G RGE G G+ G G G+ GP+G GE G PG G G GE G G+ G+ G G G G GP GKTGA+G G QPGV G G G G G+ G G +G IG G G G G G+ G +GP G GE G GPPG + GLPGP G + G PGK G QG G +G G +G RGDRG P G+RG GP G VG G G G G G G G G++G G G PG++G L G+KG G GA G KGEPG G GP G RG PG +GE+G GP GP G DG+
Sbjct: 228 RGPSGPQGARGFPGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEPGAPGENGTPGAMGPRGLPGERGRAGPNGAAGARGNDGAAGAAGPPGPTGPAGPPGFPGGPGAKGEVGAQGGRGAEGPQGARGEPGNPGPAGPAGPAGNNGADGAPGLKGGPGAPGIAGAPGFPGPRGPPGPSGTPGAPGPKGNTGEAGAPGAKGEAGVKGESGAPGVQGPPGPAGEEGKRGARGEPGAAGGRGPPGERGAPGARGFPGADGASGPKGAPGERGGPGAVGPK---------------------------GATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQ------GLPGPQGAT---------------------------GEPGKPGEQGLPGEAGATGPSGSRGDRGFP------GERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQ 794 HSP 8 Score: 55.8398 bits (133), Expect = 4.596e-7 Identity = 122/310 (39.35%), Postives = 154/310 (49.68%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPK------GDLGPRGQSGNPGPQ------------------GIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEK---------GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGAS---GAEGQPGVKGTKGDT 3307
RG PG GP G G+PG +G+ G G K G GP G++G GP G+ G G G GE G G+RG G G G G+ GD G+ G PG AGP+G G G G G +G+ G G G G+ G +GL G G+ GP G G++ G GP+G G G G G KG G +G G++GP G+ G PG G AG+ G KG++G QG++G G G G G G +GE G G +G G G PG GE+G PG G + GA+GQ G KG GDT
Sbjct: 495 RGGPGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGADGAAGPPGPAGAQGDKGEPGAAGPVGPTGARGPPGERGESGAPGPAGFAGPPGADGQAGAKGEPGDT 804 HSP 9 Score: 53.9138 bits (128), Expect = 1.712e-6 Identity = 42/93 (45.16%), Postives = 50/93 (53.76%), Query Frame = 2
Query: 1859 GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G GP G+ G GE G G GE G GP+G G G G GI+G G G DG KGD G GP G G PG G+ G +G +G GE+
Sbjct: 202 GPRGAAGPPGKNGEDGESGKPGRPGERGPSGPQGARGFPGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEPGAPGENGTPGAMGPRGLPGER 294
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Cavefish
Match: col11a2 (collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]) HSP 1 Score: 123.635 bits (309), Expect = 1.253e-27 Identity = 117/406 (28.82%), Postives = 184/406 (45.32%), Query Frame = 2
Query: 3833 LDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGS--------SGRYKRSTRAQSFVDINDAL---FDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDY--NNKGISTLGLNVLSMCF 5011
L G+ G G+KG L G+ G PG G G +G PGP G +G +G+ G PG TG +GP GP G G G G G G GP G++G+ G G G G P ++I + S G+ T F++ N+ + F ++ + +I+ +RFP G KDS ARTC D+ L + + TD +Y+IDPN+G +DS +V C F+ +TC+ K+ + P + W + +S D + V Q+ FLR + ++ Q + + C SV + DS + N ++ A + + + I + Y + DGC YR + ++ T + LP++D +I D+ NN+ G V +CF
Sbjct: 1420 LRGEAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGSKGETGMPG---GTGPLGPAGPAGVPGPRGIKGAKGAAGGAGPKGEKGVQGPPGPPGPPGDVIQPLPIQIPKKSKRSIDASEILPDGKAMDDTTGTEFLNGNEGMEEVFGSLNSLRQEIEAMRFPLG-TKDSPARTCQDLLLSQPEYTD-EYWIDPNQGCTRDSFKVYCNFTAGGETCLYPSKEVENVKMNSWPKEKPGTWYSRFAKGSKMSYV-DSNGEPVGVVQIGFLRLLSLQARQNLTYHCHHSVAWADS--TSGNGYQRALHFLGSNEEEISY-------------ETNPY----------IKALSDGCSYRKGYDRTVLEINTPQVEQLPLLDMKITDFGENNQ---KFGFEVGPVCF 1791 HSP 2 Score: 100.523 bits (249), Expect = 1.218e-20 Identity = 63/217 (29.03%), Postives = 98/217 (45.16%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGNSRR-----KAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEF------DLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMN 880
VD+L +Q++ G FC SRR A+R + A + LF +FP+ FSI+ K++ + SI N+ L + GR Y D S M P ++ +L DG WHRIA SV K +V+LL+DC+ + L R++ P+ + G + F G + LL+ A+ C+ Y+PDC++ V
Sbjct: 37 VDVLRVMQLNSLPEGVQKVPGFC-TSRRAGTADHAYRITKKAQISAPTKQLFS-RFPENFSIMALVKAKPGLQAFLLSIYNEQGVQQLGLELGRSPVFLYED---QSRMPAPEDYPLFTGINLADG-WHRIAISVQKKNVTLLLDCKKRMTKALPRSNKPVLDTKGITVFGARLLDEEVFQGDIQQLLIASNPQAAYDFCEHYSPDCDSPLPKVQAQ 247 HSP 3 Score: 81.2629 bits (199), Expect = 8.788e-15 Identity = 179/511 (35.03%), Postives = 214/511 (41.88%), Query Frame = 2
Query: 2516 GLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQ------------------GIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG 3994
G PG G G+ G +G G G +G+SG+PG Q G GA G G GE G KGDRG G G GDK G RG G G VGP G DGE+GD G +G GL G G G+ G +G G+ GS QGV G G PG G G +GE G G QG G G+ G G GP GEKG G GL G PG G G PGK G SG +G G G +G G GPRG +G+ G G G + G +G +G GI+G G KGE G +G+PGP G G G G GP G G+ G GE+G G PG+ G G++GP G +G G G G KG RGL GK G GQ+G +G +G G+ G G+KG G G GP G+RG PGP+G
Sbjct: 507 GPPGPMGFTGRPGPLGTPGSNGLKGESGDPGAQGPRGPQGMPGPPGKAGRRGRAGADGARGMPGETGIKGDRGFDGLPGLPGDK------------------------------------------------GYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGS---QGVRGSDGPPGPKGNLGPQGEPGPPGQQGGPGTQGMPGPQGATGPPGEKGPTGKPGL---PGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKG------------------HKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGED---------------------------GPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPKGSLGF---------------PGFPGTNGEKGGRGLIGKTGPRGQRGPTGPRGQRGPRGSTGKSGAKGSSGGDGPAGPPGERGLPGPQG 903 HSP 4 Score: 75.8702 bits (185), Expect = 4.312e-13 Identity = 145/369 (39.30%), Postives = 178/369 (48.24%), Query Frame = 2
Query: 2942 KTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQ---GPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+ LKG G +G G G G GS G +G SG+PG+ G +G QG G G G G G G G GE G+KGD G G PG G+ G G GA G G PG G +GD G +GPRG G +PG +G G GP G+ G G++ GPPG KG LGP G PGP G G G G PGP G +G G+ GP G PGLPG G GP G G +G +G +G++GP G G++G GP G G+ +G+ G G G+KGE GIKG G G G G PGP G GP+G +G GP GE G +GP+G G+ G
Sbjct: 502 RLALKGPPGPMGFTGRPGPLGTPGSNGLKGESGDPGA------QGPRGPQGMPGPPGKAGRRGRAGADGARGMPGETGIKGDRGF---DGLPGLPGDKGYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPG------------------EPGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKGNLGPQGEPGPPGQQGGPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGV---------------------------QGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLG 816 HSP 5 Score: 70.8626 bits (172), Expect = 1.423e-11 Identity = 152/425 (35.76%), Postives = 180/425 (42.35%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIR---GARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGG---SGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
RG G G G+PG+ GI KGD G G G PG +G R GA G GP GE G +GD G GP+G G+ G RG G +GPPG AG G G G PG KG G G PGP G G G +G+ G +G+ GP GEKG G G G+ G G G G EG +G G++GP G G G PG G+ KGV+G GL G G G+ G G +G GVKG +G+ G+ GPRGE GP+G +G + GPPG G LGP+G G +G PGLPG G QGP G G G GE+G RG G G GQRGP GP G
Sbjct: 557 RGRAGADGARGMPGETGI---------KGDRGFDGLPGLPGDKGYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKGNLGPQGEPGPPGQQGGPGTQGMPGPQGAT---GPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGI---------------------------------KGVQGIRGL---------KGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGE------------------------------DGPEGPKGRV---GPPGEIGSLGPVGEKGKLGV---------------------------PGLPGYPGRQGPKGSLGFPGFPGTNGEKGGRGLIGKTGPRGQRGPTGPRG 867 HSP 6 Score: 70.0922 bits (170), Expect = 2.243e-11 Identity = 51/103 (49.51%), Postives = 61/103 (59.22%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG +GIRG G KG+ G G G +G+ G+KG +GE G+ GPRG +G G KG +G GE G G G KG G G PGY G G KGS G G G +GEK
Sbjct: 743 KGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGTNGEK 845 HSP 7 Score: 68.1662 bits (165), Expect = 9.391e-11 Identity = 100/287 (34.84%), Postives = 119/287 (41.46%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLK---GTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGL 3340
GPPG +GP+G PG PG+ G +G G G GP G GN GP G +G+ G GP G G +G RG G +G G+ G G KG G+ G +G VG GP GE G GP G+ G G+ G VG KG G GL G G QG G G PG G N G KG GLIG TG G+ G GP G+ G G+ G+ G KG+ G G GP GE+GL
Sbjct: 687 GPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDG------------------------------------------FPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGTN---------------------------------GEKGGRGLIGKTGPRGQRGPTGPRGQRGPRGSTGKSGAKGSSGGDGPAGPPGERGL 898 HSP 8 Score: 65.855 bits (159), Expect = 4.242e-10 Identity = 48/106 (45.28%), Postives = 63/106 (59.43%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGI------QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G G G SG KG+ GPSG G+ G G +G+KG GI +G +G +G G+KGD G++GE G G G +G++G GP G G PG GS GPVG +G+ G
Sbjct: 711 GHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLG 816 HSP 9 Score: 64.3142 bits (155), Expect = 1.439e-9 Identity = 128/350 (36.57%), Postives = 154/350 (44.00%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRG---LLGRKGSVGPIG------PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGT 3520
G RG +G G G G++G G GD+GPRG G PGP+G+ G + GP G GS+G RG GP GP G+ GP G G G G G +G+ G G GP GEKG G L G G+ GP G P G KG+ GP G G G G GIKG +G GL G +G +G G PG GD GV G RGE GV G G GP G GR+G G G G G +G+ GV G G G GP+G G G G +G +G G +G GP G++G GP G GP G+
Sbjct: 591 GYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPK---GPPGIAGSQGVRGSDGPPGPKGN---------------LGPQGEPGPPGQQGGPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVK---------------------------GERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPKGSLGF---------------------PGFPGTNGEKGGRGLIGKTGPRGQRGPTGPRGQRGPRGS 874 HSP 10 Score: 55.4546 bits (132), Expect = 7.636e-7 Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSV---GPPGYAGNPGIKGSRGPVGNQG 2122
GARG+ G +G KGD G G G G+ KG +G G GP GP G G +GD G+ GPRG G G G + GPPG AG+ G++GS GP G +G
Sbjct: 564 GARGMPGETGIKGDRGFDGLPGLPGD---KGYRGNNGAMGPVGPPGEDGERGD---DGDVGPRGLPGEPGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKG 657 HSP 11 Score: 54.6842 bits (130), Expect = 1.144e-6 Identity = 45/107 (42.06%), Postives = 59/107 (55.14%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRG---------EVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G +G++G G+ GP+G+ G G G +G G G QGP GP+G G G GI+G G RG G+KG++G G PG G+ G+KG RG VG G GE
Sbjct: 681 GPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGE 787 HSP 12 Score: 54.299 bits (129), Expect = 1.485e-6 Identity = 58/139 (41.73%), Postives = 74/139 (53.24%), Query Frame = 2
Query: 974 GRDGLPGTPGVPGAPGHIFVLPIPDSEENSNR------RVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNK 1372
G+ GLPG GVPG PG +LP + ++ + AQ + + + LKG GP G TG PG G G G+KG+ G G G GP+G+ G G G GR+G DG RG G TG KG G G+ GLPG+K
Sbjct: 452 GKAGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPAVSAQEAQAQAILSQARLALKGPPGPMGFTGRPGPLGTPGSNGLKGESGDPGAQGPRGPQGMPGPPGKAGRRGRAGADGARGMPGETGIKGDRGFDGLPGLPGDK 590 HSP 13 Score: 53.9138 bits (128), Expect = 1.849e-6 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 2
Query: 1883 SGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGE------TGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G+ G G G +G+ GE GI+G RG +G+ G+ GD G +G GP G+DG +GD+G VGP G G PG +G GP G G G +
Sbjct: 554 AGRRGRAGADGARGMPGETGIKGDRGFDGLPGLPGDKGYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGSQ 644 HSP 14 Score: 52.7582 bits (125), Expect = 4.747e-6 Identity = 109/306 (35.62%), Postives = 129/306 (42.16%), Query Frame = 2
Query: 3218 GRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP--RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR---GPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPG------------------------LTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GE GPPGK G GA+G PG GT ++ P G+ G D + + L ++GPP G +G G PGP+GT G +G G G PG G G G G PG G+ G G G G GE G +GDR G PG+ G+ G RG NG +G V G PG G RG DG VG PG+ G R L G KG PG G+ G +G GPPG + GPQG G PG KG TG G G G DG
Sbjct: 443 GDPGERGPPGKAGLPGADGVPGPPGTS----VMLPFRFGQSGGDKGPAVSAQEAQAQAILS---------------QARLALKGPP---GPMGFTGRPGPLGTPGSNGLKGESGDPGAQGPRGPQGMPGPPGKAGRRGRAGADGARGMPGETGIKGDRGFDGLPGLPGDKGYRGNNGAMGPV------------------GPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKGNLGPQGEPGPPGQQGGPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADG 708
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Cavefish
Match: col1a2 (collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]) HSP 1 Score: 118.627 bits (296), Expect = 3.889e-26 Identity = 291/918 (31.70%), Postives = 381/918 (41.50%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGN---PGPQGIRGARGQSGPTGELGSKGDRGKFGPQG---PTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLG---KTGLKGTR---------------GEVGIKGSEGKTGLMGSRGPQGVSGE------------------PGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPG---KTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG------------------------------ETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDH--TQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGC-MYRTPGSSSKFKLE--TTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G +GPSG PG G+ G G +G G G RG G+ GP G++G RG GP G G++G G GP G P G KGE G G+ G PG +G G+ G +G+ G G GEKG+ G G G G R G+ G GS G +G G+RGP G GE G+ G+ G G KG+ G G GP G G G G GP G +G G GL G GA GR+G AGP G G +GA+G+ G +G +GD G GP+GE GL GP G G KG G G G G +GPQG G G G PG +GE G LPG G+ G +G+ G G PG G +G+ GLPG G QG AG G+ G G G G GI G+ G+ G GP+GI G GP G G +G G G G S G G VG G +G +L+G G G G G KG+ G GL G G +G PGP G +G GPIGP G G G GP+GP G PG G G G D G Q +R + Y+ +S D L N + R DI+L T Y+IDPN+G D+I+ C FS +TCI + + N+ + + + + + G + ++ TQ+ F+R +++ Q + + C S+ Y D +E K A +L +G D + + R F ++ DGC + R G SK +E T S LPI+D D GL++ +CF
Sbjct: 533 GEQGPSGAPGFQGLPGPAGPVGETGKPGDRGIPGDQGVAGPSGVKGERGTPGPAGASGAQGPIGARGPAGTPGPDGSKGEPGAVGAAGAPG---------------------------------HQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGRDGARGAPGPSGPPGPAGANGDKGETGSFGPSGPAGARGPSGERGESGPAGPPGFAGPPGADGQAGARGEKGPGGVKGDVGAPGPAGPAGNTGPLGPSGPVGPPGARGDSGPPGLTGFPGAAGRVGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPAGPQGENGLIGPPGLSGEKGSPGESGPMGPPGI---AGPQGQLGSQGFNGLPGSRGERG---LPGAAGSVGEAGRVGPSGSPGPRGPSGNI------GLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAG---SAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGMKGLRGHPGLQGMPGPNGPSGDTGAAGIAGPAGPRGPAGPNGPPGKDGRSGTHGPIGPAGHRGPPGHVGPVGPPGSPGLAGPPGAAGGGYDVSGGYDEYRADQAALR------AKDYEVDATIKSLNTQIDNLLSPEGSKKNPARTCR---------------DIRLSHPDWTS-FYWIDPNQGCTMDAIKAFCDFSTG-QTCIHAHPESIPRKNWYRSSQEKKHIWFGETINGGTEFGYNDETLSPQSMATQLAFMRLLANQAVQNVTYHCKNSIAYMD---AENGNLKKAVLL-------------------QGSNDVELRAEGNSR--FTFSVLEDGCTLQRHTGQWSKTVIEYRTNKPSRLPILDIAPLDIGGA-DQEFGLDIGPVCF 1354 HSP 2 Score: 80.8777 bits (198), Expect = 1.166e-14 Identity = 198/541 (36.60%), Postives = 243/541 (44.92%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKG------DLGPRGQSGNPGPQGIRGARGQSGPT---GELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGP---------------DGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GP GL G PG G++G G G GP G++G PG +GI G +G +GP+ GE G+ G G G QGP G +G G PG G G G G G G G G G G G G GEKG G G +G+ G G +G+KG+ G G +G G RG G +G G G G GP G G+ G+ G+ G G KG+ G G GP G G G G GP G +G G GL G GA GR+G AGP G G +GA+G+ G +G +GD G GP+GE GL GP G+ GE +G PG G +GP G+ GP G G G + GLPG G +G G +G+ GEAG G G P G RGP+G IG+ G G G G G G G PG+ G +KG +G PG+ G +G G PGP GP G G PG +GE G GP G VG G
Sbjct: 518 GPAGPVGLGGAPGEKGEQGPSGAPGFQGLPGPAGPVGETGKPGDRGIPGDQGVAGPSGVKGERGTPGPAGASGAQGPIGARGPAGTPGPDGSKGEPGAVGAAGAPGHQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGRDGARGAPGPSGPPGPAGANGDKGETGSFGPSGPAGARGPSGERGESGPAGPPGFAGPPGADGQAGARGEKGPGGVKGDVGAPGPAGPAGNTGPLGPSGPVGPPGARGDSGPPGLTGFPGAAGRVGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPAGPQGENGL---------------------------IGPPGLSGE---KGSPGESGPMGPPGIAGPQGQLGSQGFN---------------------GLPGSRGERGLPGAAGSVGEAGRVGPSGSP------GPRGPSGNIGL---------------PGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGP---LGPSGAVGRPGNRGEAGSAGPSGAVGPAG 983 HSP 3 Score: 65.4698 bits (158), Expect = 5.794e-10 Identity = 181/525 (34.48%), Postives = 228/525 (43.43%), Query Frame = 2
Query: 2540 DGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQG---PTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGA---------EGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGP---------PGLTGPQG---KRGNPGPKGETGLMGPIGPVGEDGE 4042
+G G +G G G +G+ G G G +G G +GP GE G GDRG G QG P+G KGERG PG G G +G +G +G G GPDG KG+ G +G G G +G G+ G G G G++G +G +G G G+AG +G +G G G GP G G KG+ G GP+G G G +G G++G +G +GQ G +G KG G+ +G+ G GP GP G+ G G G G G+ G+SGP G+ G G G G G G +G PGP G G G G G G + G G+ GL GP G SG +G GE G GPPGIAG GQ G S+G +G PG +GER L G GS G G VG G PGP PG+TGPQG + G+PG G G G G G+ GE
Sbjct: 517 NGPAGPVGLGGAPGEKGEQGPSGAPGFQGLPGPAGPVGETGKPGDRGIPGDQGVAGPSGVKGERGTPGPAGA------------------------------------SGAQGPIGARGPAGTPGPDGSKGEPGAVGAAGAPGHQGAAGMPGERGAAGTPGAKGEKGEAGYRGLEGNAGRDGARGAPGPSGPPGPAG---------------ANGDKGETGSFGPSGPAGARGPSGERGESGPAGPPGFAGPPGADGQAGARGEKGPGGV---KGDVGAPGPAGPAGNTGPLGPSGPVGPPGARGDSGPPGLTGFPGAAGRVGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPA------------GPQGENGLIGPPGLSGEKGSPGESGPMGPPGIAGPQGQLG---------------------------------SQGFNGL---PGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGE 939 HSP 4 Score: 59.3066 bits (142), Expect = 4.700e-8 Identity = 66/192 (34.38%), Postives = 82/192 (42.71%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGV 3070
PG+RG GLPG G G+ G +GP G GPRG SGN G G+ G +G++G G G+ G G+ G G GD+G E G G LG G+ GP+GP G G G G+ G G G VG G+ G L G GP+G G G GD G+
Sbjct: 865 PGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRG---------------------------------------------EPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGM 1011 HSP 5 Score: 56.9954 bits (136), Expect = 1.989e-7 Identity = 65/188 (34.57%), Postives = 78/188 (41.49%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGE---KGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGE 3043
G PG RGPSG G PG+ G +G G +G G G G PG GI+G RG+ G G LG G G GP G G G R G G G G+VGP G G +G GP G+ G+ G +G+ G+KG G GL G GP G SG+
Sbjct: 890 GSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNR---------------------------------------------GEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGMKGLRGHPGLQGMPGPNGPSGD 1032 HSP 6 Score: 55.8398 bits (133), Expect = 5.473e-7 Identity = 45/98 (45.92%), Postives = 55/98 (56.12%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
KG RG GS G G G G +G G VG G +GE G GP G G AG +G +QG +GPRG+ G GD+G G G G+PG++G GP G G
Sbjct: 934 KGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGMKGLRGHPGLQGMPGPNGPSG 1031 HSP 7 Score: 55.0694 bits (131), Expect = 9.311e-7 Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKG---EYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
GI G G G G +G G+RGE G+ G G E G GP G G G G+IG+ G TGP+G+ G +G G+ GPPG G GIKG RG G+ G
Sbjct: 848 GIAGPQGQLGSQGFNGLPGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPG 944 HSP 8 Score: 52.373 bits (124), Expect = 4.988e-6 Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 1871 DHGPSGQVG------TRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
++GP+G VG +GE G G G G+ GP GP G G GD GI G+ G G G KG+ G+ GP G +G G G+RGP G G DG K
Sbjct: 516 NNGPAGPVGLGGAPGEKGEQGPSGAPGFQGLPGPAGPVGETGKPGDRGIPGDQGVAGPSGVKGERGTPGPAGASGAQGPIGARGPAGTPGPDGSK 610 HSP 9 Score: 51.9878 bits (123), Expect = 6.370e-6 Identity = 48/103 (46.60%), Postives = 56/103 (54.37%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGI---QGPRGPEGIAGVKGDIGIQGET---GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
GA+G G G +GD GP+G G G +G G+ GE G GP GP GIAG +G +G QG G RG+ G G GSVG G G G G RGP GN G
Sbjct: 800 GAQGKDGPRGLRGDVGPAGPQGENGLIGPPGLSGEKGSPGESGPMGPPGIAGPQGQLGSQGFNGLPGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIG 902
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Cavefish
Match: col5a3b (collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]) HSP 1 Score: 117.087 bits (292), Expect = 1.001e-25 Identity = 110/397 (27.71%), Postives = 172/397 (43.32%), Query Frame = 2
Query: 263 VDLLTAVQISDKNIGTTAEEPFCGN-----SRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGPVKXXXXXXXXXXXXXXXXXXXXXXXXXN------------GRDGLPGTPGVPGAPGHIFVLPIPDSEENSNR------RVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGD---PGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGER-GSNGLTGPKGRSGDIGMQGL 1360
+D+L + +SD+ G + E C N A++ + + + LF +FP+ FS+L+T + + SI N + L + GR Y D PS + + +L DG+WHR+AFSV+ V+L +DC+ + ++ L R +P + G + F G + L++ + A C Y PDC++ + P + + P GP G G G GR GL G G+PG PG++ +LP + + + AQ + ++ +KG GP G+ G PG G G G+KGD PG GD GF G PG G G R GS+G GP+G+ G+ G +G+
Sbjct: 4 IDVLKILDLSDRMEGVSLEAGLCTNRPGLDEVDLAYKIDKKIQVSVPTKQLFPSEFPENFSVLVTVRPRRGAQCFLLSIYNPDGVQQLGLELGRSPVFLYEDQNGRPSPDQYPIF-KKINLADGRWHRLAFSVEGKKVTLYLDCKKLTTLDLPRGEEPKVSTEGVTVFGTRLLDEEVFEGEIQHLIISPDPAAAADYCVNYIPDCDSALLYSSLLLDPEEGPGGPEKGEKGEPAGPPGEAGPMGPPGPRGDPGDLGPAGRQGLAGADGIPGPPGNMLMLPQFQFGGDGQKVPVVSAQEAQAQAILQHAKLSMKGPPGPLGLNGRPGPLGNPGPTGLKGDSGLPGPPGDRGF------------DGLPGLPGNKGHRQGSDGQPGPRGQPGEPGGRGV 387 HSP 2 Score: 104.76 bits (260), Expect = 5.739e-22 Identity = 212/543 (39.04%), Postives = 259/543 (47.70%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI---RGARGQSGPTGELGSKGDRGKFG-------PQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGR----KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGER---GDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER--------YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
GPPG RG GLPG PG G G G GPRGQ G PG +G+ +G++G G GE G+ G +G G PQG G G++G G +KG+RGL G +G G GP GEKG G G G G G G+KG++G G+ GS+G +G G PG+ G+ GV G+ G+ G G +G GP G +G G G G G+ G+ G +G G PG G GP G G GA G G KG KG G G G++G + G G++G +G GK G +GS G+ GP G GE G QGP GR GE+GP G GP G G G G G PG GK G GP+G G QG AGE G+RG PG AG G++G G G G G G G G GP G G +GSRG G +G PG KG G +G PG GA+G G G G GP G++G P G GPIGP G+DGE
Sbjct: 346 GPPGDRGFDGLPGLPGNKGHR--QGSDGQPGPRGQPGEPGGRGVDGVQGSKGNLGSPGEPGAPGQQGNPGIMQGFPGPQGLVGLPGDKGPQG---------------------------------------KKGMRGLPGTDGPPQGHPGREGPPGEKGLPGLAGVQGPVGYPGARGVKGADGLRGIKGSKGEKGEDGFPGAKGEMGVKGDGGDTGPVGMRGEDGPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEKGRKGPPGQAGIAGQRGPN---GARGARGARGPTGKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGK---------------DGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSGPGATGERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEP-----QGEKGPIGPAGQDGE 824 HSP 3 Score: 98.5969 bits (244), Expect = 4.881e-20 Identity = 208/572 (36.36%), Postives = 251/572 (43.88%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPG------KPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGK-----TGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEP----GSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGS------PGTIGAVGSKGE------------------------------PGPPGL---TGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+GP G G GLPG +PG GK G GP G +GP+G +G GP G RG G +GP GE G G GK G +G G G G G G++G G +G+ G +GP G KG GP+G TG +G G G G G+TG G GP G GEP G G AG +GE+G G G+ GP GP G E G KG+ G G G+ G GE GP G TG G EGQPG+ G G++G P G+QG+ G +G G +G G +GP+G++G + GPPG KGE G GL GP G GP G G G G PG+ G++G GG G +GE GE GD GP GI G+ G++G G G G G G PG G G G G G GL G G PG+ G + G GS PG G G+ GE PG GL TGP G +GNPG G GL G GP GE G
Sbjct: 651 KGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTG---------------------------------------VSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSGPGATGERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEPQGEKGPIGPAGQDGEQGPVGLPGATGPPGPPG------------EDGDKGETGGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESG---PPGQQGM------------YGQKGDEGLRGFKGATGPRGLQG---MPGPPGEKGESGHSGLIGPPGQFGPRGPQGPSGGQQ--------------GPPGRPGVRGQPGGVGEKGEDGESGDPGPVGIPGSNGEKGDQGEKGDSGASGAGGIPGARGTSGEDGAKGNSGPIGLTGDPGPPGEAGTDGIDGAPGSKGDNGEPGKAGPPGASGEPGPPGRPGRRGHLGPPGKEGKPGMKGDKGAPGYEGLLGKTGPVGGQGNPGKAGPQGLPGIPGPAGEQG 1139 HSP 4 Score: 92.8189 bits (229), Expect = 3.138e-18 Identity = 225/578 (38.93%), Postives = 279/578 (48.27%), Query Frame = 2
Query: 2486 RGPPGT------RGP---------------SGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGD---RGKFGPQGPT------GDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGK-----TGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEP----GSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT---------------GPQGKRGNPGPKGE------TGLMGPIGPVGEDG 4039
+GPPG RGP SG G G DG G G +G GP+G+ G GP+G G G+ G G G +G+ +GK GP GP+ G+ GE G G +G PG AGP G G+ G+ G +G KG G+ G G G G++G G +G+ G +GP G KG GP+G TG +G G G G G+TG G GP G GEP G G AG + G GPVG+ G G PGP GE G KG+ G G G+ G GE GP G TG G EGQPG+ G G++ GP G+QG+ G +G G +G G +GP+G++ G+ GPPG KGE G GL GP G GP G G G G PG+ G++G GG G +GE GE GD GP GI G+ G++G G G G G G PG G G G G G GL G+PG GE GI G+PG+ G G G+ GPPG + GP GK G PG KG+ GL+G GPVG G
Sbjct: 588 KGPPGQAGIAGQRGPNGARGARGARGPTGKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSGPGATGERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEPQGEKGPIGPAGQD------------GEQGPVGLPGATGPPGPPGEDGDKGETGGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGES---GPPGQQGM------------YGQKGDEGLRGFKGATGPRGLQ---GMPGPPGEKGESGHSGLIGPPGQFGPRGPQGPSGGQQ--------------GPPGRPGVRGQPGGVGEKGEDGESGDPGPVGIPGSNGEKGDQGEKGDSGASGAGGIPGARGTSGEDGAKGNSGPIGL---TGDPGPPGEAGTDGIDGAPGSKGDNGEPGKAGPPGASGEPGPPGRPGRRGHLGPPGKEGKPGMKGDKGAPGYEGLLGKTGPVGGQG 1118 HSP 5 Score: 92.4337 bits (228), Expect = 3.778e-18 Identity = 200/552 (36.23%), Postives = 243/552 (44.02%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIR------GARGQSGPTGELGSK---GDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSV---GPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLP---GKAGLQGPAGGSGTQGEAGE-RGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGL---------------TGPQGKRGNPGP---KGETGLMGPIGPVGEDG 4039
RG G G G+ G G G++G G KG++G +G G+ GP G+R G +GQSGP G+ GS G++GK G G G G +G G+ G PG G G G G PG G G G G +G G +G G G KGS GP GP GE+G GP G+ G G +G G G +G G G RG G G+ G PG +GV G +G+ G GP G G G AGPPG+ G GA G+ G KG G TG+ G G GL G +G G G GPPG KG GP+G GP T G G PGL G+ G G AGG G GE GE +G++GP G AG G++GP VG G G PGP G G G G G +G G GEPG G +G +G PG G G G PG G+ TGP+G +G PGP KGE+G G IGP G+ G
Sbjct: 480 RGVKGADGLRGIKGSKGEKGEDGFPGAKGEMGVKGDGGDTGPVGMRGEDGPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEKGRKGPPGQAGIAGQRGPNGARGARGARGPTGKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGV---------------------------------VGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNGPTGL---------------------------KGFRGSRGAPGTMGPPGLKGSWGPVGSSGPGAT----------------------GERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEPQGEKGPIGPAGQDGEQGP------VGLPGATGPPGPPGEDGDKGETGGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESGPPGQQGMYGQKGDEGLRGFKGATGPRGLQGMPGPPGEKGESGHSGLIGPPGQFG 943 HSP 6 Score: 87.8113 bits (216), Expect = 8.515e-17 Identity = 191/507 (37.67%), Postives = 221/507 (43.59%), Query Frame = 2
Query: 2567 KGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGI----KGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE---AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSR---GLDGKVGEPGQKGERYLKGIKGSPGTIGA------VGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
KG GP G +G PGP G G G G +G G GDRG G G G+KG R QG G+ G RG G G G G G KG++G G+ G G +G GI G +G GL G +GPQG G G PG G QG PG+ GP GEKG+ G G+ GP G PG G GA G G G KG KG+ G G +GE G+ +G G++GP G+ GE G +GP KG+ GP+G PG G AG+ G +G PGLPG G QGP G G G AGE+G +GPPG AG GQRGPNG G G GP G+ G G G G PGP G R G G+VGE G KG G G PG G G G PGP G+ GPQG G GP GE G G GP GE G
Sbjct: 315 KGPPGPLGLNGRPGPLGNPGPTGLKGDSGLPGPPGDRGFDGLPGLPGNKGHR--------------------------------------QGSDGQPGPRGQPGEPGGRGVDGVQGSKGNLGSPGEPGAPGQQGNPGIMQGFPGPQGLVGLPGDKGPQGKKGMRGLPGTDG--------------------PPQGHPGREGPPGEKGLPGLAGVQGPVGYPGAR------GVKGADGLRGIKGSKGEKGEDGFPGAKGEMGV---------------------KGDGGDTGPVGMRGEDGPEGP---KGQSGPLGDPGSSGI------------------AGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEKGRKGPPGQAGIAGQRGPNGARGARGARGPTGKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQG 715 HSP 7 Score: 84.7297 bits (208), Expect = 8.898e-16 Identity = 194/549 (35.34%), Postives = 232/549 (42.26%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGKEGSIGPKGDLGPR----GQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPI------GPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGS------------PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYL------------------KGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
PG +G GLPG G GK+G G G GP G+ G PG +G+ G G GP G G++G +G G +G G KGE+G+ G G KG G+ G G GP+ GP+G KG GPLG G G GE G G G G G +GP+G G PG+ PG AG+ G++G G +G++G GP G G G G G G G+ G GP G G IG GP G G G G PG +G G G GP G G+ G QG+ G +GP G G G GPPG +G G G G G G +G G GP G G G G G+ G PG G GP G SG G G+RGPPG+AG +GQ G G G GP +G G +G GQ GE+ KG G PG G+ G KGEPGP G TG QG G PG G G GP G
Sbjct: 419 PGPQGLVGLPGDKGPQGKKGMRGLPGTDGPPQGHPGREGPPGEKGLPGLAGVQGPVGYPGARGVKGADGLRGIKGSKGEKGEDGFPGA------------------------------------KGEMGVKGDGGDTGPVGMRGEDGPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEKGRKGPPGQAGIAGQRGPNGARGARGARGPTGKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGV------------------VGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSGP----GATGERGPPGLAGAIGQPGRTGTAG-----------------GPGPMGEKGEPQGEKGPIGPAGQDGEQGPVGLPGATGPPGPPGEDGDKGETGGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESGPPG 892 HSP 8 Score: 81.6481 bits (200), Expect = 7.655e-15 Identity = 200/518 (38.61%), Postives = 243/518 (46.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGD--KGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---------GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGL 4006
RG PG+ GP G G PG GKEG+ KGD G G SG GP G++G RG G G +G G +G +GP G +G GERG PG G G G G G G G+KG EKG G G+ G GP+G GE GD G G G KG++G+ G G G TG G G G+ G G G G G G++G +G +G G G +G+ G PGP GEKG G GLIGP PG+ G GP G +G G +G PG G +G G +G +GE G G GP+G G G +G G +G +G SG G+ G G G G KG GPIGL G PG PG+AG G G G++G+ GE G GPPG +G GP G PG +G G GK G+PG KG++ G +G G G VG +G PG GPQG G PGP GE GL
Sbjct: 702 RGHPGSAGPPGEQGLPGAAGKEGA---KGDPGSTGVSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSGPGATGERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEPQG-----------EKGPIGPAGQDGEQGPVGLPGATGPPGPPGEDGDKGETGGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESGPPGQQGMYGQKGDEGLRGFKGATGPRGLQGMPGPPGEKGESGHSGLIGP---PGQFGPRGPQGPSG--GQQGPPGRPGVRGQPGGVGEKGEDGESGDPGPVGIPGSNGEKGDQGEKGDSGASGAGGIPGARGTSGEDGAKGNSGPIGLTG------------------------------DPGPPGEAGTDGIDGAPGSKGDNGEPGKAGPPGASGEP---------------------------GPPGRPGRRGHLGPPGKEGKPGMKGDKGAPGYEGLLGKTGPVGGQGN---PGKAGPQGLPGIPGPAGEQGL 1140 HSP 9 Score: 80.1073 bits (196), Expect = 1.826e-14 Identity = 144/384 (37.50%), Postives = 178/384 (46.35%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDG------KEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKG---DRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIK---------------GSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP------GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSG------------PQGVEGELGIQGPPGRKGELGPIGLPGPV 3514
GP GT+GP G PG PG+DG ++G G KGD G RG G GP+G++G G G GE G G G+FGP+GP G G + G G+ G+ G VG G DGE GD GP+G G G +G+ G K G+ G+ G G+ GP G++G+PG PG+AG +G G G +G G G G G G+PGP G G +G +G G G PG G+ G P GKTG G +G PG G +G GI GP GEQGL+GP G G G G G PG +G G G P G GE G +G PG +G GP G PGPV
Sbjct: 868 GPTGTQGPEGQPGIPGVDGESGPPGQQGMYGQKGDEGLRGFKGATGPRGLQGMPGPPGEKGESGHSGLIGPPGQFGPRGPQGPSGGQQG-----------------------------------------PPGRPGVRGQPGGVGEKGEDGESGDPGPVGIPGSNGEKGDQGEKGDSGASGAGGIPGARGTSGEDGAKGNSGPIGLTGDPGPPGEAGTDGIDGAPGSKGDNGEPGKAGPPGASGEPGPPGRPGRRGHLGPPGKEGKPGMKGDKGAPGYEGLLGKTGPVGGQGNPGKAGPQGLPGIPGPAGEQGLNGPPGQTGPPGPMGPSGLPGLKGDHGRKGDKGHGGLIGLIGPPGEFGEKGDRGMPGNQGVQGPKGDPGPV 1210 HSP 10 Score: 73.1738 bits (178), Expect = 2.395e-12 Identity = 43/166 (25.90%), Postives = 76/166 (45.78%), Query Frame = 2
Query: 4241 DALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCI------SSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGD-SELSEENKFKY 4717
+ +F + + +++ +R P G S ARTC ++ + + D Y+IDPN G +D+ + C F+ E +TC+ SVK +N +KP W + R S D V Q+ FL+ ++ + Q +LC SV + D + S + ++
Sbjct: 1292 EEVFASLASMRTEVEGLRTPQG-TYHSPARTCKELWMWNPKLPD-VYWIDPNHGCHRDAFKAFCNFTAEGETCLQPHSKYQSVKLA--AWNKEKP----GTWFSKFRKGSQFSYI-DADGNDVHVVQLGFLKLLSATARQSFTYLCQNSVGWLDGATFSHKRALRF 1448 HSP 11 Score: 67.0106 bits (162), Expect = 1.754e-10 Identity = 203/525 (38.67%), Postives = 237/525 (45.14%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE------LGSKGD-RGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG---PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPG-------RIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGP---------RGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQK------------GERYLKGIKGSPGTIGAVGSKGEPGPP 3946
RG PGT GP GL +GS GP G GP G +G GP G+ GA GQ G TG +G KG+ +G+ GP GP G GE+G G G GP GP G G G G G +KG +G G G GP G P+G+ G G G++G G +G G KG EG G G+ GP+G+ G PG PG EKG G GLIGP G G G+ GPPG+ G G G G KG G++G GP +G+QG G G G+ G+ G RG G G+ GNSGP G+ G+ GPPG G G G PG G +G GK G PG G G G G G G PGK G G G G G G G GP G GN G+ GP G GI GP G +G GP G GP G GP G GL G G G K GE KG +G PG G G KG+PGP
Sbjct: 750 RGAPGTMGPPGL---------KGSWGPVGSSGP-GATGERGPPGLAGAIGQPGRTGTAGGPGPMGEKGEPQGEKGPIGPAGQDGEQGPVGLPGATGPPGPPGEDGDKGETGGPG---------------QKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESGPPGQQGMYGQKGDEGLRGFKGATGPRGLQGMPGPPG------------------------------------EKGESGHSGLIGPPGQFGPRGPQGPSGGQQGPPGRPGVRGQPGGVGEKGEDGESGDPGPVGIPGSNGEKGDQGEKGDSGASGAGGIPGARGTSGEDGAKGNSGPIGLTGD---PGPPGEAGTDGIDGAPGSKGDNGEPGKAGPPGASGEPGPPGRPGRRGHLGPPGKEGKPGMKGDKGAPGYEGLLGKTGPVGGQGNPGKAGPQGLPGIPGPAGEQGLNGPPGQTGPPGPMGPSGLPGLKGDHGRKGDKGHGGLIGLIGPPGEFGEKGDRGMPGNQGVQGPKGDPGPV 1210 HSP 12 Score: 56.6102 bits (135), Expect = 3.268e-7 Identity = 46/99 (46.46%), Postives = 53/99 (53.54%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
++G G G SG G G +G+ G GE G G G G QG G G G KGD G G +G G G KG GS G PG G PG+KGS GPVG+ G
Sbjct: 674 FQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNGPTGLKGFRGSRGAPGTMGPPGLKGSWGPVGSSG 772 HSP 13 Score: 56.225 bits (134), Expect = 3.771e-7 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G +G +G G G GPSG G G G G +GE G QG GP G +GV G G GETGP G+ +G GS GPPG G PG G G G+ G G
Sbjct: 636 RGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGE---RGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTG 733 HSP 14 Score: 55.8398 bits (133), Expect = 5.284e-7 Identity = 49/129 (37.98%), Postives = 62/129 (48.06%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGD------------IGIQGETGPRGKDGNKGDEGSVGPPGY----------------AGNPGIKGSRGPVGNQGRDGE 2134
G G +GS G KG+ GP+G GT+G G G+ G G GP G +G+ G KGD G+QG GP G+ G G G +GPPG G PG++G G VG +G DGE
Sbjct: 850 GGPGQKGSKGDKGEPGPAGPTGTQGPEGQPGIPGVDGESGPPGQQGMYGQKGDEGLRGFKGATGPRGLQGMPGPPGEKGESGHSGLIGPPGQFGPRGPQGPSGGQQGPPGRPGVRGQPGGVGEKGEDGE 978 HSP 15 Score: 55.0694 bits (131), Expect = 8.191e-7 Identity = 48/103 (46.60%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +GE+G+KG G+ G G RG +G G KG G G+ G G G KG G G PGY G G KG+ G G G GEK
Sbjct: 483 KGADGLRGIKGSKGEKGEDGFPGAKGEMGVKGDGGDTGPVGMRGEDGPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEK 585 HSP 16 Score: 54.6842 bits (130), Expect = 1.197e-6 Identity = 45/99 (45.45%), Postives = 53/99 (53.54%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G G+ G GP G G RG G +G GE G +GP GP G G+ G G +GE G +GK G G G VGP G AG G G RG G+ G GE+
Sbjct: 616 GKSGDKGSAGHDGPPGPSGERGPQGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQ 714 HSP 17 Score: 53.1434 bits (126), Expect = 3.077e-6 Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +G G KGD G +G VG RGE G +G KG+ G G G GIAG KG +G+ G G G+ G KG +G PG G G KG +GP G G G++
Sbjct: 505 GAKGEMGVKGDGGDTGPVGMRGEDGPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGF---PGAIGVAGEKGRKGPPGQAGIAGQR 600 HSP 18 Score: 52.7582 bits (125), Expect = 4.573e-6 Identity = 42/101 (41.58%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G +G G G KG GP+G+ G G G +G G G GP GP G+ G +G+ G G G RG G+ G G G PG AG G KG G G G++G
Sbjct: 639 QGPQGRVGEIGPKGPSGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGNAGETGPMGERGHPGSAGPPGEQGLPGAAGKEGAKGDPGSTGVSGKNG 739 HSP 19 Score: 51.6026 bits (122), Expect = 9.847e-6 Identity = 47/122 (38.52%), Postives = 59/122 (48.36%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK---------------------DGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G +G SG GD G SG G +G++G+ G+ G G QGP+G +G G G G +G GP G+ G GD+GS G+ G PG G RGP G QGR GE
Sbjct: 529 GPEGPKGQSGPLGDPGSSGIAGEKGKLGVPGLPGYPGRQGPKGTDGFPGAIGVAGEKGRKGPPGQAGIAGQRGPNGARGARGARGPTGKSGDKGSA---GHDGPPGPSGERGPQGPQGRVGE 647
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005318.1 (pep scaffold:Pmarinus_7.0:GL477895:43798:56979:-1 gene:ENSPMAG00000004829.1 transcript:ENSPMAT00000005318.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 134.806 bits (338), Expect = 1.180e-32 Identity = 219/749 (29.24%), Postives = 285/749 (38.05%), Query Frame = 2
Query: 2882 KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVG------------IKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVG------------SKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFD-KVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEG-------------AISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRT-PGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
KG G GP G G+VG +G TG G GE G G++GK G MG RG G GEPG PG G+ G +GE+G +G G G GAPG G G G G SG G+ GV G G TG LG SGP G +GE +G PG G G G PG G G SG DGA G G +G GD G G+PG PG G G G SG G+ G RG+ GP G +G +G+ G GP+G +G +G GE G GER +KG +G G G G G GP G TGP G RG G G+ G +GP G G GE G + + P+ RY RA + +DA D + +TN+++ I P G D AR+C D+ L G+Y+IDPNEGS D+++V C E +TC+ Y K + + W N E S D S + Q+NFLR +++ Q I +LC SV Y D+ S + A LM G ++ R G+ F ++ DGC T + + +T S LPI+D D G+ + +CF
Sbjct: 1 KGPSGEGGPKGALGEVGGMGMTGFPGAPGESGTGGPPGGIGPQGASGAQGKDGSMGPRGDTGTPGEPGEPGPTGL---------------------------LGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLG---------------------------------KSGPTGEQGE---RGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLG---------------------------PQGPNGAHGERGDSGERGIKGHRGWSGFQGLPGLPGPHGHQGGPGINGGSGPRGPTGPAGGRGKDGHNGQAGPLGPSGHRGRPGE--------AGSAGPAGSPGIPGPPGPPGPAANGYGQLPLIGMEKGPDPYPYRY----RADEALKEHDAEVDVTLKSLTNQLENIMSPEGTKTD-PARSCRDLMLCHSDWKSGEYWIDPNEGSVLDAMKVWCNM-ETGETCV---------YPKPKNVPSKNWWSNKGSREHKHVWFGEAMPGGFHFSYGDDTMSANIAEVQLNFLRLVAAEASQNITYLCRNSVAYADAAGS----LRKAVRLM-----------------GSGELELRA----DGKNRFTYSMLEDGCAKHTGEWGKTVLQYKTNKPSRLPIVDIAPLDIGGP-EQEFGVEIGPVCF 610 HSP 2 Score: 74.7146 bits (182), Expect = 1.072e-13 Identity = 98/277 (35.38%), Postives = 124/277 (44.77%), Query Frame = 2
Query: 2534 GIDGKEGSIGPKGDLGPRGQSGNPGP------QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGP---LGKTGLKGTRGEVGIKGS------EGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILG 3319
G GK+GS+GP+GD G G+ G PGP QG RG RG SG G G+ G G G G G G+R GE+GV GL G GS+G GP GE+G+ G +G GL G GE G +GS G+ GL G RG +G G PG PG+ G G G+ G G+ G RGE G +GD G++G G+ G +G GP G G G G+ G+KG +G +G G
Sbjct: 47 GAQGKDGSMGPRGDTGTPGEPGEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQR------------------------------------------GERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPG---------------NMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERGIKGHRGWSGFQG 266 HSP 3 Score: 61.2326 bits (147), Expect = 1.751e-9 Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNP---GIKGSRGPVGNQGRDG 2131
G G+ G+ G +G+ GPSG GT G G G G +GIQG RG G+ G+ G G G++GP G+ G +G G+VG PG G P G +GS G G GRDG
Sbjct: 71 GPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDG 176 HSP 4 Score: 60.8474 bits (146), Expect = 2.025e-9 Identity = 70/171 (40.94%), Postives = 86/171 (50.29%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTG---------LKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
E G GLLG +G G GP G +G G G +G L G RGE G+ G G TG +G GP G GE G+PG+ G G G+ G +G G G G G G GV+GD G G G PG G G PG +GA+G +G G G +GD+GI+G G G
Sbjct: 69 EPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVG------SPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAG 233 HSP 5 Score: 57.3806 bits (137), Expect = 2.349e-8 Identity = 69/194 (35.57%), Postives = 82/194 (42.27%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAG 3067
RGP GTRG +G PG G GS G +G G RG+ G PG G G+ G+SGPTGE G +G G G G G GE G +G G G G G G G++G+ G G+ G G G G+ G+ GK G G GPQG SG G PG AG
Sbjct: 85 RGPSGTRGTAGAPGSSGF---LGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGE------------------------------------------SGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAG 233 HSP 6 Score: 50.447 bits (119), Expect = 3.309e-6 Identity = 42/100 (42.00%), Postives = 51/100 (51.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
GA+G GS G +GD G G+ G G G+ G +GE G +GP G G AG G G G G +G G +G+ G PG G G G GP G QG G
Sbjct: 47 GAQGKDGSMGPRGDTGTPGEPGEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGV---PGLNGPTGSLGKSGPTGEQGERG 143 HSP 7 Score: 50.0618 bits (118), Expect = 4.130e-6 Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHG---PSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G G GSSG G HG SGQ G RG G+ G G G GP G +G G G++G G G G+ G +G G+ G G G G++G RG G GR G
Sbjct: 91 RGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPG 194 HSP 8 Score: 49.6766 bits (117), Expect = 5.565e-6 Identity = 42/102 (41.18%), Postives = 51/102 (50.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG RG G G G G+ G GE G +G G G G G G +G +G G G +G G G +GD G G PG GNPG G+ G G G+DG +
Sbjct: 113 GQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHR 214 HSP 9 Score: 49.6766 bits (117), Expect = 6.060e-6 Identity = 43/102 (42.16%), Postives = 50/102 (49.02%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G GSSG G G G G RG+ G G G G G G G++G G G +GETGP+G G G GS GP G G G G RG G +G G +
Sbjct: 158 GESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERGIKGHR 259 HSP 10 Score: 49.2914 bits (116), Expect = 7.628e-6 Identity = 58/174 (33.33%), Postives = 71/174 (40.80%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGL 3007
RG PG G GL G PG G+EGS G G SG G G+RG RG+ G G G+ G+ G G G G G R G G +G G++GR GS GP+GP G G G G +G +G +G G G +G GL
Sbjct: 142 RGAPGNVGSPGLNGAPGESGREGSSGTDG------ASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHR---------------------------------------GETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERGIKGHRGWSGFQGLPGL 270
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009617.1 (pep scaffold:Pmarinus_7.0:GL476473:139194:170406:1 gene:ENSPMAG00000008685.1 transcript:ENSPMAT00000009617.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 96.6709 bits (239), Expect = 2.590e-20 Identity = 199/515 (38.64%), Postives = 233/515 (45.24%), Query Frame = 2
Query: 2516 GLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIG-------LIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G+PG+ G G G+ G +GD G +G G PG G RG G GP G G+ GD+G GP GPTG G RG G +G GP GP G G G G+ G KG +GE G KG G+ GPQG SG PG G GV+G KG +G G L GP + G PG G +G G+ G KG +GD+G +G GE GL GP+G G KG G G PG G G QG+ G+ GI G PG++GE G GLPGP G G G GA G G G G G G PG G+ G G G G G AG +G+RG G AG G G G G VGP G G G GP GP+G PGP G+RGL G G G KGE G +G G G G +G PGPPG +G QG G+ GP G GL GP GP G+DG
Sbjct: 149 GMPGERGATGISGAKGDRGDSGEKGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTG------------------------------------------------PSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGD------AGAPGPQGPSGAPGPQGPNGVSG------------------------------PKGARGAQGPPPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKGIRGDSGPVGRAGEPGLQGPIGAPGEKGDAGEDGPPGPDGPPGA---QGLSGQRGIVGLPGQRGERGFPGLPGPAGEPGKQGSTGASGERGPPGPVGPPGLSGPPGEQGREGNAGSDGAPGRDGAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNGARGDQGPQGPMGPPGPSGARGLPGPQGPRGDKGETGEAGERGIKGHRGFTGLQGLPGPPGSSGDQGLAGSVGPSGPRGLSGPTGPPGKDG 576 HSP 2 Score: 87.4261 bits (215), Expect = 1.957e-17 Identity = 70/269 (26.02%), Postives = 108/269 (40.15%), Query Frame = 2
Query: 4196 RYKRSTRAQSFVDINDALFD-KVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHT--------QMNFLRNQNSKSYQ-----EIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDY 4960
RY RS +A + +DA D + ++ +I+ +R P G K+ A RTC D+KL + G Y+IDPN+G D+++V C E +TC+ + Q N+ + ++ + + A+S LH Y D QM FLR + ++Y I + C S+ Y D E K A +L + I R N + E+GR +EY T S LP +D D
Sbjct: 637 RYYRSDQALPELRQHDAEVDASIKSLSGQIEGLRSPEGTRKNPA-RTCRDLKLCHPEWESGNYWIDPNQGCTLDALKVFCNM-ETGETCVYANPQTISRKNW---WQSKSADRKHVWFGEAMSGG--LHFNYGDDNLPANTAAIQMTFLRLLSMEAYDLPAAANITYHCKNSIAYMDEET---GNLKKALLLQGSNDMEIRAEGNSRFTYNVLEDSCTKHTGEWGR----TVVEY----------------RTQKTSRLPFVDVAPMDV 875 HSP 3 Score: 74.3294 bits (181), Expect = 1.778e-13 Identity = 170/426 (39.91%), Postives = 195/426 (45.77%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXEKGVRG------LLGRKGSVGPIGPDGEKGDV---------GPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQ 3718
GP G GPSG G PG G+ G GP G GP G G PG +G +G GQ G G G +G G GPQGP G G +G G+QGPP A V +P +G G G GP G G KG+RG G G GPIG GEKGD GP G GL G RG VG+ G G+ G G GP +GEPG G G + G GP G G PG GP GE+G +G+ G GAPGR G AG G+ G +GA GQPG G+ G G +GP G+ G G GP G G G G G G G G +G GE G +G G +G G GLPGP PG +G QG AG G G G G GPPG GN GQ
Sbjct: 206 GPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKGARGAQGPPPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKGIRGDSGPVGRAGEPGLQGPIGAPGEKGDAGEDGPPGPDGPPGAQGLSGQRGIVGLPGQRGERGFPGLPGP---AGEPGKQGSTGAS------------GERGPPGPVGPPGLSGPPGEQGREGNAGS---DGAPGRDGAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNGARGDQGPQGPMGPPGPSGARGLPGPQGPRGDKGETGEAGERGIKGHRGFTGLQGLPGP---------------------------------PGSSGDQGLAGSVGPSGPRGLSGPTGPPGKDGNNGQ 580 HSP 4 Score: 61.6178 bits (148), Expect = 1.567e-9 Identity = 167/472 (35.38%), Postives = 196/472 (41.53%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGK---------------------TGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPT------GAPGRIGEAGPPGKTGAS---GAEGQPGVK------GTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQG----PPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA---------------------------GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---------PGPKGETGLMGPIGPVGEDGE 4042
+G RG G +G+ GP G G +G G G G+ G RG GI G++G G G +GP+G PG G GV G G PGP G G KGD G GPT GAPG GE GPPG G + G++GQPG K G KGD G GP+G G GP GP GV G G +G PPG + GP PV G G G GP G G G G G G G+ GLQGP G G +G+A G+RG+RG PG+ G G+ G G G G GP G GP G GP G G +G+ G DG G G G + +G G+ G GA GS G PGP G TG G RG+ PGP G GL GP GP G+ GE
Sbjct: 97 RGERGFPGERGAPGPQGLQGARGLPGTPGTDGPKGATGPGGPPGAQGPPGLQGMPGERGATGISGAKGDRGDSGEKGPEGA---PGKDGGRGVT---------------------GPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGP------------------------QGPNGVSGPKGARGAQGPPPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKGIRGDSGPVGRAGEPGLQGPIGAPGEKGDAGEDGPPGPDGPPGAQGLSGQRGIVGLPGQRGERGFPGLPGPAGEPGKQGSTGASGERGPPGPVGPPGLSGPPGEQGREGNAGSDGAPGRDGAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNGARGDQGPQGPMGPPGPSGARGLPGPQGPRGDKGE 520 HSP 5 Score: 58.151 bits (139), Expect = 1.681e-8 Identity = 160/442 (36.20%), Postives = 190/442 (42.99%), Query Frame = 2
Query: 2924 DVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR---GPQGVSGE---PGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR---------------------IGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLP----GKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGI---KGSPGTIGA------------------------------VGSKGEPGPPGLTGPQGKR------GNPGPKGETGLMGPIGPVGEDG 4039
+ G G G+ G G+VG+ G+ G+ G G R GPQG+ G PG+PG G G G G G+QGP G G+ G G G G KG +GD G GP GAPG+ G+AGP G TG SGA G PG +G G G G G G D G G +G +GE G +G G G GP G PGP G +G SG GA G G A P G G GPAG +G G G RGD GP G AG G + GPIG G G G+ GP GP GP G G G RG+ VG PGQ+GER G+ G PG G+ GS G PG G G +G+R G PG G G GP+GP G++G
Sbjct: 75 EAGKPGAQGVPGEAGKVGVSGARGERGFPGERGAPGPQGLQGARGLPGTPGTDGPKGATGPGGPPGAQGPPGLQGMPGERGATGISGAKGDRGDSGEKGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSD------------------------GQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKGARGAQGPPPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKGIRGDSGPVGRAGEPGLQ---GPIGAPGEKGDAGEDGPPGPDGPPGAQGLSGQRGI---VGLPGQRGERGFPGLPGPAGEPGKQGSTGASGERGPPGPVGPPGLSGPPGEQGREGNAGSDGAPGRDGAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNG 486 HSP 6 Score: 53.9138 bits (128), Expect = 3.488e-7 Identity = 52/105 (49.52%), Postives = 57/105 (54.29%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPP---GYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG G SGAKGD G SG+ G G G G +G G GP GP G G KGD G G TGP G G G+ G GPP G+AG PG G G G QG G+K
Sbjct: 152 GERGATGISGAKGDRGDSGEKGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQK 256 HSP 7 Score: 50.8322 bits (120), Expect = 2.640e-6 Identity = 39/91 (42.86%), Postives = 48/91 (52.75%), Query Frame = 2
Query: 1865 KGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GD G +G G G G +G GE G GP GP G AG G G G G +G+ G KGD G+ GP G +G PG +G G G +G G +
Sbjct: 199 HGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKGARGAQ 289 HSP 8 Score: 50.0618 bits (118), Expect = 5.423e-6 Identity = 47/131 (35.88%), Postives = 60/131 (45.80%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQ----------------------------GETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+ G G G GAKG+ G +GQ +G+ G G +G G GP+GP G++G KG G Q G GP GKDG KG G GP G AG PG++ GP+G G G+
Sbjct: 234 FAGPPGSDGQPGAKGEQGETGQ---KGDAGAPGPQGPSGAPGPQGPNGVSGPKGARGAQGPPPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKGIRGDSGPVGRAGEPGLQ---GPIGAPGEKGD 358
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002207.1 (pep scaffold:Pmarinus_7.0:GL476843:46518:72113:-1 gene:ENSPMAG00000001999.1 transcript:ENSPMAT00000002207.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 92.8189 bits (229), Expect = 5.783e-20 Identity = 75/268 (27.99%), Postives = 117/268 (43.66%), Query Frame = 2
Query: 4217 AQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTD-GQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGG--LYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
A + D + +F + + +I+ I+ PTG + S RTC D++L + D G+YYIDPN+G DS V C F+ +TCI K+ G L + K G W + + S DL + QM FLR +S + Q + C SV + D E + YA L +G NE M++ G P ++ YDGC R + ++ T + +PI+D ++D+ + G V +CF
Sbjct: 146 AVDYPDGMEEIFGSISSLKREIELIKHPTG-AQSSPGRTCKDLQLSQHDLPDAGEYYIDPNQGCSADSFRVYCNFTAGGETCIYPDKKSEGARLSAWSKETPG--TWYSEYKRGKQFSYV-DLDGQGIGTVQMTFLRLLSSAARQNFTYNCHHSVGWLD-----EAEGSYARAL-------------RFMGANEQEMERG------GSP--HIRALYDGCSMRRGYEKTVLEIHTHKVQQMPIVDVLVSDFGDPH-QKFGFEVGPVCF 382
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001576.1 (pep scaffold:Pmarinus_7.0:GL476350:400893:424819:1 gene:ENSPMAG00000001417.1 transcript:ENSPMAT00000001576.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 94.7449 bits (234), Expect = 9.039e-20 Identity = 79/261 (30.27%), Postives = 115/261 (44.06%), Query Frame = 2
Query: 4196 RYKRSTRAQSFVDINDALFDKVDK-ITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCI----SSVKQQGGLYNYKKPMK----GETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLE--TTDLSMLPIIDF 4945
R+ R +A + + +DA D K +TN+I IR P G K+ ARTC D+KL + G Y+IDPN+G D+I+V C E +TC+ +V ++ N K K GET S G S P+ ++ QM FLR ++++ Q I + C S+ Y D + K A +L +G D + + R +NV DGC T G + LE T S LPI+D
Sbjct: 494 RFYRGDQASADLRQHDAEVDATLKSLTNQIDSIRSPEGSRKN-PARTCRDLKLCHPEWKSGDYFIDPNQGCTLDAIKVFCNM-ESGETCVYASPQNVPRKSWWTNKSKDRKHIWFGETMNSGSQFNYGDDSLPPNTAAI-----QMTFLRLLSTEASQNITYHCKNSIAYMDEQA---GNLKKALLL-------------------QGSNDIEIRAEGNSRFTYNVL--EDGCTKHT-GDWGQTVLEYRTQKTSRLPIVDI 722 HSP 2 Score: 58.5362 bits (140), Expect = 1.397e-8 Identity = 87/206 (42.23%), Postives = 102/206 (49.51%), Query Frame = 2
Query: 2486 RGPPGTRG------PSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGP---------LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPG 3058
RG PG RG P+G G PG DG+ G+ G +G+ G +G +G PGPQG G+ G GP G G KG RG GP G TG G AG GP G G+PG G G G GP+G G+ G G G G G GP GEKG+ G G GL G RG VG+ G G+ G G GP G G+ GSPG
Sbjct: 75 RGSPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGARGAQGPSGATGFPG------------AAGRVGPPGPNGNPGPPGPPGPGGKDGPKGIRGDSGPAGRSGEPGLQGAAGPPGEKGEPGEDGPSGPEGPPGPMGLAGQRGIVGLPGQRGERGFSGLPGPSGEPGKQGSPG 268 HSP 3 Score: 49.6766 bits (117), Expect = 6.948e-6 Identity = 47/142 (33.10%), Postives = 63/142 (44.37%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIG------------------------IQGETGPRGKDGNKGDEGSVGPPGYAGNPG---------------IKGSRGPVGNQGRDGEK 2137
+G G +G +GA G GP+G G +G G+ G KG G QGP G G G G +G I+G++GP G+ G G +G+ GPPG G PG + G RG VG G+ GE+
Sbjct: 108 QGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGARGAQGPSGATGFPGAAGRVGPPGPNGNPGPPGPPGPGGKDGPKGIRGDSGPAGRSGEPGLQGAAGPPGEKGEPGEDGPSGPEGPPGPMGLAGQRGIVGLPGQRGER 249
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003197.1 (pep scaffold:Pmarinus_7.0:GL479090:2162:37629:-1 gene:ENSPMAG00000002618.1 transcript:ENSPMAT00000003197.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.1301 bits (235), Expect = 9.630e-20 Identity = 74/282 (26.24%), Postives = 117/282 (41.49%), Query Frame = 2
Query: 4208 STRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGA-------ISRAPDLHSMYVDHT-----QMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLE--TTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ AQ+ + N L + + +++ + P G K+ A RTC ++KL G Y+IDPNEGS D+I+V C E ++C+ N P NW L+ G+ ++ +PD Y + + Q+ FLR ++++ Q+I + C SV Y D + + A +L G NE M+ R G ++ DGC T G K +E T S LPI+D D G++V +CF
Sbjct: 945 ADEAQNQGERNLELEASISSLNVRVENMVSPDGSQKNPA-RTCRNLKLCYPDLPSGLYWIDPNEGSKSDAIQVWCNM-ETGESCM----------NADNPSIARKNWW--LKPSGSKKHVWFGVTMSPDAQFTYGEDSHSTEIQLTFLRLFSTEASQKITYHCKNSVAYQDGAV---GNLQQALLLQ---------------GSNE--MEIRAE----GNSKLAYSVLEDGCTMHT-GQWGKTVIEYRTPKTSRLPIVDIAPKDVGGP-DQEFGVDVGPVCF 1186 HSP 2 Score: 63.929 bits (154), Expect = 2.946e-10 Identity = 65/179 (36.31%), Postives = 81/179 (45.25%), Query Frame = 2
Query: 2546 KEGSIGPKGDLGPRGQSGNPG-----PQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAG 3067
KEG+ GP+G+ GP G +G PG P G +GA G GP G GS G G G +G G G+RG+ G G GL+G G GP+GP GE+G GP G G G+ G+ G G+ G GL G GPQG G+ G PG+AG
Sbjct: 654 KEGTKGPRGETGPPGSTGAPGAGVTGPSGEKGAPGDDGPVGAEGSPGPSGLAGSRGVVGLPGQRGERGF---------------------------------------SGPAGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRGPPGNAG 793 HSP 3 Score: 60.4622 bits (145), Expect = 3.776e-9 Identity = 121/301 (40.20%), Postives = 139/301 (46.18%), Query Frame = 2
Query: 3170 KGVKGDIGLIGPTGAPGR-----IGEAGPPGKTGASGAEGQPG---VKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP---GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
KG +G+ G G TGAPG GE G PG G GAEG PG + G++G G+ G RGE+G SGP G+ GE G QGP G GE G G G +G++G G G G G GLPG+ G QGP G G G AG G G G +G G G G G VGP GP G GP GP GP+G G G RG +G GE G KG R G+ G PG G G G P GP G GP G G+ G G G GP+GP G G
Sbjct: 658 KGPRGETGPPGSTGAPGAGVTGPSGEKGAPGDDGPVGAEGSPGPSGLAGSRGVVGLPGQRGERGF---------------------------SGPAGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGAD------------GLPGRDGPQGPKGDRGPPGNAGPAGAPGASGPSGQAGSPGRTGERGDVGPAGPSGPAGPPGPRGPVGPLGGLGERGDNGAAGERGHKGHRGFAGLPGPPGPPGLSGESGTPGPAGPAGARGPVGGAGSHGKDGANGAPGPLGPAGPRG 919 HSP 4 Score: 56.9954 bits (136), Expect = 4.336e-8 Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G G GA+G GPSG G+RG VG+ G +GE G GP AG+ G+ G QG GP G+ G+ G G++G G G+ G G+ G G GRDG +
Sbjct: 684 KGAPGDDGPVGAEGSPGPSGLAGSRGVVGLPGQRGERGFSGP------AGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQ 780 HSP 5 Score: 50.8322 bits (120), Expect = 2.881e-6 Identity = 105/304 (34.54%), Postives = 128/304 (42.11%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPG--IDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRG------KFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSP---GDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP------------TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRG 3328
+GP G GP G G PG + G G G GD GP G G+PGP G+ G+RG G G+ G +G G + G QGP G GER G G G +G GS G G DG G G G+ G +G +G+ G G+ G G G+ GP G +G PG GD G G G G G +GP GP+G G G G GE+G KG G G +G PG G AG G G +G+ G+ G G G G GPRG
Sbjct: 658 KGPRGETGPPGSTGAPGAGVTGPSGEKGAPGDDGPVGAEGSPGPSGLAGSRGVVGLPGQRGERGFSGPAGLVGEAGKQGPVGPSGER------------------------------------------GSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRGPPGNAGPAGAPGASGPSGQAGSPGRTGERGDVGPAGPSGPAGPPGPRGPVGPLGGLGERGDNGAAGERGHKGHRGFAGLPGPPGPPGLSGESGTPGPAGPAGARGPVGGAGSHGKDGANGAPGPLGPAGPRG 919
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Nematostella
Match: EDO44729 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV66]) HSP 1 Score: 136.732 bits (343), Expect = 3.392e-32 Identity = 256/881 (29.06%), Postives = 342/881 (38.82%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV---SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMG---------------------------------QRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGIST---LGLNVLSMCF 5011
RG G GP G G PG G EG GP G G G GN G +G G +G G G G KG G+ G +GP GD GE G +GP GE G G+ G G GPIG G +G GP G GL G RG G +GS G G+ G +GP GV G+ G+PGD G P E GV G GL GP G G GE G GK G G G G +G++GD G +G R + G G +G G +G QG GR G G G+ GP G G G G GPPG G G G GKAG G G G +G G+ G GP G G++G RGP GP+GI KG RG G +G+ G KG L G +G G G +G KG G G G G+RG GP GE G++G G +G G G+ G +G G PG G +G G G G G+PG + + + + + +ND + ++ +K K P G ++ + A TC ++K DG+Y+IDPN+G D+I+V C F ++C+ + + W +LE R + + + Q+NFLR +K Q+I C V++ + Y H F G + N V +D +YD +R ++ ETT L LPI+DF Y ++ ++T G+ + +CF
Sbjct: 406 RGAAGPSGPRGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGE------------------------------------VGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGVYGMKGMKGPIGVPGFRGQHGTPGDIG-----------------------------PPGSESGVPGKTGLRGPMGHKGPDGEKGYVGKRGEKGFMGLQGDQGSRGDRGPIGERAKDG---------------------------EKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGDDG------DAGSKGKAGKIGTKGEPGRKGSPGDIGYVGPKGFLGDVGPLGEKGGQGAYGPLGEPGGPGPKGGGGPKGKLGDRGPQGPVGI------------------------KGIRGASGPIGDSGIKGGYGLMGPRGPDGNPGLLGRKGRQGEKGTAGRLGERGKKGPFGENGVLGKRGTLGPPGSPGSIGDMGAKGHPGSLGSKGRRGKLGPPGEPGKPGEILNLHL--------------LKQNTHLIVNDKKSLYLSEMDDKSKT---PLG-SRANPALTCHELK-HVNGIKDGEYWIDPNQGCSSDAIKVYCKFKTGGESCVRPALKMIPKETWNNAT--TAGWYQFSKLE----RGYKI-TYLTNKVQLNFLRLLTTKVTQKIIVKCKSVVVW-----FHRHSKSYDYSWKFHGF------NGHQFTYNSSRSSLNVLRD---------ACKYDDGRWR----RTELLFETTKLRTLPIVDFT---YYHRSLTTPEEFGVKIEPVCF 1111 HSP 2 Score: 96.2857 bits (238), Expect = 8.777e-20 Identity = 140/402 (34.83%), Postives = 177/402 (44.03%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGI------AGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+GV+GLLG +G GP G G G G +G GL G +GE KG EG+ G+ G RG +G SG PG G GP G G KG IG+IG +G+PG+ G GP G++G +GA G KG KG G +GP G QG G G++G+ G G G KG G G+PGP GT GP G G G G +PG+PG G GP+G G QG G +GD G G+ AGN G GP G +G +G ++G+ G VG PG G R L G +G G + G G PGPPG G GK G G +G G+ G G +G+ G+
Sbjct: 19 QGVQGLLGDRGPRGPPGEQGFSGVKGAVGSHGLIGRKGE---KGKEGRDGVKGERGSKGKSGLPGD------------------------------KGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALG---AKGQKGGVGSIGPSGLQGF---------------------------QGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVG------------APGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIG------------------------AKGILGDVGAPGMPGSRGLNGTRGPEGDL---GHSGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGD 318 HSP 3 Score: 76.6406 bits (187), Expect = 7.300e-14 Identity = 130/426 (30.52%), Postives = 175/426 (41.08%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGS---EGKTGLMGSRGPQGVSGEPGS---PGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGE---AGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIK---------------------GSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G G G +G++G GP G +GD GP+GK G+ GT+G +G KG +G G G GP+G GE GS PGD G E GV+G G +G G PG +G+ GP G G G +G G+ G G G+ G G G+ G +G++G +G+ G G+ G G IG PG G+PGK GL+GP G G GE G+RG++G G+ G+ G RG GPIG + G G G GP G +GL+G+ G G G R +G + GS G G +G+KGEP G +G G+ G G G +G +GP+GE G
Sbjct: 405 SRGAAGPSGPRGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFG---------------------------------EVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGV---------------------------YGMKGMKGPIGVPGFRGQHGTPGDIGPPG-----------------------------SESGVPGKTGLRGPMGHKGPDGEKGYVGKRGEKGFMGLQGDQGSRGDRGPIG---------ERAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGDDGDAGSKGKAGKIGTKGEP------GRKGSPGDIGYVGPKGFLGDVGPLGEKG 726 HSP 4 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 132/423 (31.21%), Postives = 171/423 (40.43%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV------GIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
G G G PG G G +G G GD GPRG PG QG G +G G G +G KG++GK G G G++G + G G G G GP G G KG G++G+ GS G G +G G+ GP G G KG +G V G++G +G+ GL G G GV G G G+ G+ G G +GP GA G +G+ G PG G G+ G G++G +G G+ G G G+D G G++G G+ G G GP G KG LG +G PG G S GL G G +G G SG G G +GD G PGI G+ G +G +G G +
Sbjct: 2 GLMGSRGTPGDQGGRGPQGVQGLLGDRGPRGP---PGEQGFSGVKGAVGSHGLIGRKGEKGKEGRDGVKGERGSK------------------------GKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNT------------------------------------GIPGPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVD---------------------GFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPG---------------------------SRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSI 313 HSP 5 Score: 71.633 bits (174), Expect = 2.869e-12 Identity = 106/285 (37.19%), Postives = 139/285 (48.77%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGL 3340
+G G++G SGLPG G G G G KG +G G+SG+PG G G G+SGPTG LG+KG +G G GP+G +G +G G +G G G +G G AG+ G G +G G +G KG +G +G G G VG +G +GL+G +G +G+KG G G+ G +G G +G PG G G P G KG+ GD+G G G+ G G GP G G SG G PG +G G GI G G QG+
Sbjct: 67 KGERGSKGKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPG---------------PQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMG------------------------------PIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPGIRGHEGLQGV 306 HSP 6 Score: 67.781 bits (164), Expect = 3.596e-11 Identity = 122/369 (33.06%), Postives = 154/369 (41.73%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGE---------------------LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---------GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPV 3514
G RGP G PG+ G G +G++G G +G +G+ G G G++G RG G +G +G G GK G +GPTG+ G G G G+KG VG IGP G KGD G G G KG G GI G +G G +G++G G G PG PG G G G QG QG G G G G+ G G G G+ G G +GP GA G +G+ G PG G+ G G G +G G +G+ GP G QG PG+ G G+ G QGV G+ G G PG G+ G GLPG +
Sbjct: 26 GDRGPRGPPGEQGFSGVKGAVGSHGLIGRKGEKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESG---------------------------------------------PTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQG------------------DPGKPGIRGHEGLQGVSGKAGSIGDPGDPGDEGNEGLPGDI 331 HSP 7 Score: 56.9954 bits (136), Expect = 7.238e-8 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGI-AGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAG---NPGIKGSRGPVGNQGRDGEK 2137
G RG+RGS G+ G +G G +G +G+ G +G++G G GP G +GV G G++G G +G DG KG G G G+ G + G +G RGP+G + +DGEK
Sbjct: 527 GKRGLRGSEGSTGVYG---MKGMKGPIGVPGFRGQHGTPGDIGPPGSESGVPGKTGLRGPMGHKGPDGEKGYVGKRGEKGFMGLQGDQGSRGDRGPIGERAKDGEK 629 HSP 8 Score: 55.8398 bits (133), Expect = 1.849e-7 Identity = 51/128 (39.84%), Postives = 65/128 (50.78%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGP---------RGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY----------------AGNPGIKGSRGPVGNQGRDGEK 2137
KGA G GS G GD G G G GE+G +GV GE G GP +GP G+ G+ G G++G G G G KG +G +G PG+ +G PG G RGP+G++G DGEK
Sbjct: 466 KGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGVYGMKGMKGPIGVPGFRGQHGTPGDIGPPGSESGVPGKTGLRGPMGHKGPDGEK 593 HSP 9 Score: 54.6842 bits (130), Expect = 3.574e-7 Identity = 47/103 (45.63%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+GA G G G +GD GP G+ G G G G KG G+QG RG +G G KG G G GP G G G G G G G PG G GP+G QGR+G K
Sbjct: 415 RGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFK 517 HSP 10 Score: 54.299 bits (129), Expect = 4.969e-7 Identity = 45/107 (42.06%), Postives = 57/107 (53.27%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSV------GPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G +G +G G KGD G G G +G G G+ G QG GP G G+ GD+G G G RG +G +G EG + GPPG+ G+PG G RG G QG G+
Sbjct: 206 GLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGP---QGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPGIRGHEGLQGVSGK 309 HSP 11 Score: 53.9138 bits (128), Expect = 6.967e-7 Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KGA GI G SG+ G G G G G G G KG+ G G GP G+ G +G +G++G+ G G DG KG G+ G PG G G G++G +G+ G G
Sbjct: 94 KGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPG 194 HSP 12 Score: 52.7582 bits (125), Expect = 1.313e-6 Identity = 47/111 (42.34%), Postives = 58/111 (52.25%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSG-------QVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGP---RGKDGNKGDEGSVGP---PGYAGNPGIKGSRGPVGNQGR 2125
G G RG G GD GP G + G RG +G KG GE G G RG +G G++GD G +G+ GP R KDG KG +G GP G G G++G G G QG+
Sbjct: 551 GVPGFRGQHGTPGDIGPPGSESGVPGKTGLRGPMGHKGPDGEKGYVGKRGEKGFMGLQGDQGSRGDRGPIGERAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGK 661 HSP 13 Score: 52.7582 bits (125), Expect = 1.635e-6 Identity = 43/97 (44.33%), Postives = 55/97 (56.70%), Query Frame = 2
Query: 1853 SSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQ---GETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
S GA G GP G +G G G++G +G G G G +G G KG IG+Q GE GP G G G+ GS GPPG G G++G G +G++G GE
Sbjct: 405 SRGAAGPSGPRGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGE 501 HSP 14 Score: 52.373 bits (124), Expect = 1.841e-6 Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA+G G G +G+ GP G G GE+G KG G++G G RGP G G +G G G+ GP G G +G +G G PG G G++GS G G G G K
Sbjct: 446 GAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGVYGMKGMK 547 HSP 15 Score: 51.6026 bits (122), Expect = 3.410e-6 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1871 DHGPSGQVGTRG------EVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETG------------PRGKDGNKGDEGSVGPP---GYAGNPGIKGSRGPVGNQGRDGE 2134
D GP G VG +G +G G+KG YG+ GPRGP+G G+ G G QGE G P G++G G G++GPP G G+ G KG G +G++GR G+
Sbjct: 754 DRGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGPRGPDGNPGLLGRKGRQGEKGTAGRLGERGKKGPFGENGVLGKRGTLGPPGSPGSIGDMGAKGHPGSLGSKGRRGK 862 HSP 16 Score: 50.8322 bits (120), Expect = 5.029e-6 Identity = 47/126 (37.30%), Postives = 61/126 (48.41%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGP------RGKDGNKGDEGSVGPPGYA------------------GNPGIKGSRGPVGNQGRDGEK 2137
G G+RG G KG G G VG RGE G G++G+ G +G RGP G G+ G++GETGP G+ G +GD+G GP G G+ G KG G +G +G G K
Sbjct: 576 GKTGLRGPMGHKGPDGEKGYVGKRGEKGFMGLQGDQGSRGDRGPIGERAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGDDGDAGSKGKAGKIGTKGEPGRK 701
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Nematostella
Match: EDO42953 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S046]) HSP 1 Score: 136.732 bits (343), Expect = 4.209e-32 Identity = 288/900 (32.00%), Postives = 395/900 (43.89%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGK---PGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVR--GLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---------------GKTGASGAEGQPGVKGTKGDTGILGPRG------EQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQK------------GERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPK------------------GETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGR-YKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS 5014
RGP G +GP G PG PG+ GK G GP+G+ RG G PG G RG +G++GPTG G PTG G+RG G+ G P + +R ++G G+ GP G+ G G+ G+ G G G G++G G G GP G+ G+ G+PG G+NG G QG G +G G G G G + G +G GL G GAPGR GE G G G G+ G+PG+ GT G G LG +G QG+ G GP G G G G PG G +G++G GV+G G G PGR GE G G PG G G G DG PG G G+ G G G G PG G +GP G G +GE G G G G G +G RGP G G G G G+PG G G G PG KG RG G+ G+ G++ GE ++G KG+ G G G +G GP G GPQG +GN GP+ G+ G GP G G DG G G +GP GP G PG G PG G G G G + + +G R Y S A+ + + + ++K+ + IR PTG K++ A+TC D+++ G Y+IDPNEGS KD+I V C FS + +CIS K + L N + ++ N ++ E + +S + +Q+ FLR + ++YQ + + C + + + S + + + K + I N D ++T ++T LPI+D + D+ K + + V S+CF+
Sbjct: 596 RGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGE---RGTDGKPGAMGERGPQGETGPTGLTG------------PTGKPGDRGSNGADGTPVSK-------------------------------HEFIRYFAIIGEPGAQGP------SGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNG------KNGDQGPRGLPGTPGAPGRNGEQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGSTGEGGRPGRDGEPGEPGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGPPGITGNRGPPGSPGIKGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPGEPGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGDKGFTGSDGSPGAPGQQGEQGPPGVAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPGPPGYTGLSPVGGYLSVGTVEKGPGYRLYAGSKDAKKPDNPSVSFMTALEKMEIDVNTIRKPTGM-KNNPAKTCKDLRMDHPDYVSGYYWIDPNEGSKKDAIRVYCDFSNDF-SCISPTKAK--LLNLR--VQANVNKKDKWLSEAFEEESQIDYS--AEQSQIAFLRVFSKRAYQNVTYNCQNYKAWTNRKHSIKLRGDNDLIFHAKSPKKFQPTV-----------------------ILNECTTKDDQWHKT-----ILAIDTKQKHRLPIVDMALFDF-GKPHQKVTVEVGSVCFA 1400 HSP 2 Score: 93.5893 bits (231), Expect = 6.013e-19 Identity = 204/566 (36.04%), Postives = 239/566 (42.23%), Query Frame = 2
Query: 2495 PGTRGPSGLPGKPGIDGK------------------EGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGP------------------LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR---------IGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGE--RYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG G G PG PG +GK +G G G+ G RG GNPG +G RGA TG GS G++G GP GP G KG+ G G G PG G G +G G G G +G G PG G G G+ G G G G IG GEKG GP +G+ G G G+ G +G+ G G G+ GP G GE GSPG AG G KG++G G G G G G PG PG G+ G+ GD G G GAPG+ G GP G GA GA G+PG G G G G +GE GL +G +G+ G G G G GE GP+G GP G G G PGLPGK G GP G GT G+ G G+RGP G G G GP G G RG +G G P K E RY I G PG G G+ G PG G+ G G+RG PG KG G G +GP G DG+
Sbjct: 251 PGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGA------TGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGL---------------------------AGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGA---------------------PGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPG---------------------------DRGSNGADGTPVSKHEFIRYFA-IIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGK 734 HSP 3 Score: 86.6557 bits (213), Expect = 8.342e-17 Identity = 210/548 (38.32%), Postives = 269/548 (49.09%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGEL------------GSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGR---KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGS---------------RGPQGVSGEPGSPGDAGVNXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGEL---GPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIA---GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGL 4006
GP G+ GP G G+ G+ G+ GS G +G GP G+PG G GA G+ G GE G KG+ G G +G G G G G+ G PG G G +G+ G G +G G G G +G G +G RGL G KG G G G G+ GP G +G +G++G+ GI G G+ GL G RGP G G G+PG G+NG++G G +G +G GP G G G PGP G++G G +G +GP G PG G GP G GA+G G+ G +G+ G G G +G++G G G G GL+G G+PG G G +G G +G+ G G PG+ L G G+PGP G +G G + G PGK G GP G +G +GE+G G RG PG+A GN G+ G GP+G P GP G PG +G GL GK GE G +GER G G PG +G G +GE GP GLTGP GK G+ G G G
Sbjct: 165 GPRGSDGPRGQRGEVGLPGESGSAGRRGASGP---PGSPGIDGFSGAPGEQGEKGEAGPSGPPGFPGLKGQKGEEGNLGERGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGAN---------------------GEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVG---------------PQGPQGAPGTQGPPGLPGKTGESGPRGER---GTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGT 670 HSP 4 Score: 76.6406 bits (187), Expect = 8.470e-14 Identity = 201/547 (36.75%), Postives = 258/547 (47.17%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGEL---GSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGR---KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGS---------------RGPQGVSGEPGSPGDAGVNXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGEL---GPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G RG GLPG+ G G+ G+ GP G G G SG PG QG +G G SGP G G KG+ G G +G G G G G+ G PG G G +G+ G G +G G G G +G G +G RGL G KG G G G G+ GP G +G +G++G+ GI G G+ GL G RGP G G G+PG G+NG++G G +G +G GP G G G PGP G++G G +G +GP G PG G GP G GA+G G+ G +G+ G G G +G++G G G G GL+G G+PG G G +G G +G+ G G PG+ L G G+PGP G +G G + G PGK G GP G +G +GE+G G RG PG+AG +G GEPG++G +G +G+PGT +G PG PG TG G RG G G+ G MG GP GE G
Sbjct: 171 GPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDGFSGAPGEQGEKGEAGPSGPPGFPGLKGQKGEEGNLGERGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGAN---------------------GEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGK------------------------------------------NGNAGEPGERGPVGPQGPQGAPGT------QGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETG 648 HSP 5 Score: 75.0998 bits (183), Expect = 2.453e-13 Identity = 191/555 (34.41%), Postives = 225/555 (40.54%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDG----------------EKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR------GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPP---------------GKTGASGAEGQPGVKGTKGDTGILGPR------GEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGE 4033
G+RG G+ GK G G+ G GP G GP+G G GP G+ G G+SGP GE G+ G G G +GP G+ G G+ G G+ G G G DG E G GP G G G +G G G G G GSR GP G+ G+ G+PG G+N G G QGP G G G PG G G+ G +G GL G GAPGR GE G G G G+ G+PG+ GT G G LG + G QG+ G GP G G G G PG G +G++G GV+G G G PGR GE G G PG G PG+PG G G G G G GE+G GPPGI GN RGP G GI KG RG GK G G+ G L+G G PG G GEPG PG+ G G+ G PG KGE G G G G+
Sbjct: 576 GSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETG---------------------------------------------PTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFAIIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLN------GPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGPRGLPGTPGAPGRNGEQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGSTGEGGRPGRDGEPGEPGTPGRDG---------------------------EPGIPGPDGRPGERGPGGEIGRKGEKGPSGPPGITGN---RGPPGSPGI------------------------KGERGYPGKDGRAGEPGAVGLRGPTGQPGENGL---PGEPGKPGINGTNGRGGIPGLKGERGSPGEPGKAGK 1022 HSP 6 Score: 73.1738 bits (178), Expect = 1.013e-12 Identity = 188/541 (34.75%), Postives = 226/541 (41.77%), Query Frame = 2
Query: 2507 GPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQG------VSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSG---------TQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGP---------------KGETGLMGPIGPVGEDG 4039
G +GLPG G DGK G+ G L +G +G PGP G+ GA+G +G E G GD GPQGP G KGE G+ G+ G G G+ G G G +G VGP GP G G GP G G G G G +G++GK G MG RGPQG ++G G PGD G NG G + + G+ G GP+G PG G G PG ASG G PG KG++G+ G +GP G G DG G G G G +G G +G G+ G G G+ G+ GP GLPG +PG PG+ G QG +G +G +G G G G PGI G +GQR G +G G G PG G G G PG G G G G G G G+KGS G G G GEPG PG G G+ G PGP KGE G GP G G G
Sbjct: 507 GKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANG---EPGKDGD---TGPQGPAGAKGE------------------------------SGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFA-----------------IIGEPGAQGPSGNPGTPGRQGMPG---ASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGE---------KGEAGQPGTNGFNGKNGDQGPRGLPG------------------------------TPGAPGRNGEQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQR------GRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGSTGEGGRPGRDGEPGEPGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGPPGITGNRG 946 HSP 7 Score: 72.4034 bits (176), Expect = 1.828e-12 Identity = 143/412 (34.71%), Postives = 177/412 (42.96%), Query Frame = 2
Query: 2903 GPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY------------------LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGP---------------KGETGLMGPIGPVGEDG 4039
GPDG GD+G G +G G G +G G G G+ G GPQG G G PG + GI G G+KG G GP G+PG G G G G G G PG G+ G G GP G G+DG G G +G KG G G G G G +G EG LG +G GR G G G PG G+ G GK G G G G G G G G PG G +G G G +G+ G G RG PG N G +GP+GP G KG G+DG+ GEPG G++ GI G+PG G G +G PG PG G +G++G+ GP +G+ G +GP+GP+G+ G
Sbjct: 76 GPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGGS-------------------TQAAGGIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDGFSGAPGEQGEKGEAGPSGPPGFPGLKGQKGEEGNLGERGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPG---NQGPQGPSGPQG------------------------SKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPG 441 HSP 8 Score: 66.6254 bits (161), Expect = 8.358e-11 Identity = 200/552 (36.23%), Postives = 245/552 (44.38%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI------------RGARGQSGPTGELGSKGDRGKFGPQ------GPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG-PD-----GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPG-PVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDR---GPPGIAGNMGQRGPNG---PIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER------------YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG 4012
RGP G G +G PG GI+G G+ G G +G +G+ G+ GP G RG G+ GP G +G G RG GP+ GP G KGE+G PG+ G PG G G G G PG G +G G PG G G+ G+ G G+ G G G PD G G GP G G KG GE G G G G G++G G++G G PG AG N G GE G +G +G GP GAPG G G PGKTG SG G+ +GT G G +G R GPQG G G+ GP G+ G+ G G G PV K G+ G GP G+PG PG+ G+ G +G G G G RG+R GPPGI G G G +G P G GP G +G+ G G G G G +G RGL G G PG+ GE+ GIKG+ G +G+ G PG+TG G+RG G KG G G
Sbjct: 368 RGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKN---------------------------GNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGE---RGTDGKPGAMGER---------------------------------GPQGETGPTGLTGPTGKPGDRGSNGADGTPV------SKHEFIRYFAIIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGPRGLPGTPGAPGRNGEQGASGPTGPVGPRGPGGIKGAKGVMGSSGR------PGITGTLGQRGRLGSKGGEGTPG 844 HSP 9 Score: 63.5438 bits (153), Expect = 8.723e-10 Identity = 197/589 (33.45%), Postives = 237/589 (40.24%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRG------LLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP---QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGT------------KGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGE------------------LGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQ------------GEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK------------------------GIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G RGP G PG GD GP G++G PGP G G G G G+ G +GD+ GPQGP G + G++G G KGS G GP G G GP G G +G RGEVG+ G G G G+ GP G+ G G+PG+ G G G G PG PG +G+KG +G++G G G PGR G G PG G+ GAEG+ G+ G +G G G G +GL G G G +G G RG PG QG G SGPQG +G+ GI G PG G GP G PG G G G +G G+PG PGK G +G G G G+ G+ G GP G G+ G RG GP G G GP G+ G G G G PG KG +G GK GEPG+ G R G G P + G G PGP G+ G +G G PG G+TG GP G GE G
Sbjct: 73 GQRGPDGPPGD------------IGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQ---GPQGPPGGSTQAAG-------------------------------------------GIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDGFSGAPGEQGEK---------------GEAGPSGPPGFPGLKGQKGEEGNLGERGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGN---------------PGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESG 573 HSP 10 Score: 56.6102 bits (135), Expect = 1.152e-7 Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G G +GAKG +G G+ G G G G KGE G+ G RG G+AG G+ G GE GP G G +G G+ GPPG PG G GP G +G DG+
Sbjct: 537 GMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGL---PGKTGESGPRGERGTDGK 634 HSP 11 Score: 56.225 bits (134), Expect = 1.459e-7 Identity = 228/569 (40.07%), Postives = 264/569 (46.40%), Query Frame = 2
Query: 2498 GTRGPS---------GLPGKPGIDGKEGSIGPKGD------LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGR----------------------IGE---AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPG------------TIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G+ GP+ G PGK G G+ G +GP GD GPRG G GP G +G +G G G GSKGD+G G G G G RG PG G PG G G G G G G G QG G G G+ G KG+ G G DG+ G GP G++GL G+RG G+ G G G G RGP G G G+PG G G GK G GP G G G PG G RG +G G GL GPTG PG IGE GP G G G +G PG G +G G G RGE+G GP G G G G G G G G +G +G G+ G G G+ G+ GP GLPG G G +G+ GA GP G G G G G+ G+ G +G G G G +G G +G G PG G G GP G G GP GP G GP G G G G G G G+ GEPG+ G G G PG IG G KG GPPG+TG +G G+PG KGE G G G GE G
Sbjct: 405 GSEGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQG---PPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFAIIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGPRGLPGTPGAPGRNGEQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGSTGEGGRPGRDGEPGEPGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGPPGITGNRGPPGSPGIKGERGYPGKDGRAGEPG 970 HSP 12 Score: 52.373 bits (124), Expect = 1.960e-6 Identity = 52/134 (38.81%), Postives = 63/134 (47.01%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEV---------GMKGVKGEYGIQGPRGPEG-----------------IAGVKGDIGIQGET------GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG RG G G GD GPSG+ G G + GM+G G G QGP+GP G AG+KG G G GPRG DG +G G VG PG +G+ G +G+ GP G+ G DG
Sbjct: 71 VKGQRGPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGGSTQAAGGIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDG 204
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Nematostella
Match: EDO49368 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG67]) HSP 1 Score: 129.028 bits (323), Expect = 1.836e-30 Identity = 219/734 (29.84%), Postives = 294/734 (40.05%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGV---EGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLD-GKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRS---TRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMY-VDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS 5014
+GV G G +G G +GP G++G+ GP G G KG G+ G G++G+ G G +G QGVSGE G+ G G G G+ GD G GP G G G GPPG G GA G PG G +G G G +G++G G G G G G GPQG +G+ G QG G GE+GP G PGP G G SG+ G + G PG+ G QG +G SG G G G G PG+ G G++G G G GP G + G R D G GE G+ G L G++G G G G+ GEPG G G G G PG G G G IG G G G GP G GP GPPG G PG P I + ++ S T+ Q ++ L ++ + NKI + G K AR+C ++K+ G YYIDPNEGS D+ EV C F+ TC+ + + GE W I+ D+ Y +D QM FLR + + Q + + C S + DS ++I L LG NE + ++ N D ++T + T LPIID + Y+ + + + + +CF+
Sbjct: 12 QGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGA-------------------------------GIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKG---------------GAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAG------------------ADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDRGSKGPKGGASGFPGKPGLPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGANGEPGSAGSPGTPGAMGPPGDSGSKGAAGIIGEPGSPGPRGPIGPQGDPGPEGPPGPPGPPGPPVSVNKLSHCIPYIIFAITGDNNANKQMFEESVSSTKQQLICFLDVCLIAVINLLINKIVTYKEQEG-TKGKPARSCRNLKIDNPDKKSGYYYIDPNEGSPSDAEEVWCDFTTNA-TCVFPKNTEIITRSLVVNSNGEDTW---------ITENDDVKIDYKLDVVQMKFLRLMHKTAKQNMTYHCYNSRAWEDS-------------------RTIKL-----LGDNEEEITAKLR--------LNECQNKDNQWHKT-----VLDISTKQKDKLPIID--VAPYDLQDGAQFKIELGPVCFA 631 HSP 2 Score: 87.0409 bits (214), Expect = 3.520e-17 Identity = 150/429 (34.97%), Postives = 188/429 (43.82%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGIL---------GPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIV 3748
G PG +G G+PG G G+ G++GP+G G G +G GP+G G GQ G G G+KG+RG G QG G GE+G+ G +GP G P + G +G G +GS G GP G GD G G G G RG G +G +G G G+RG GV+G PG G+ G + G GE+G +G +G +GPTG+P G AG PG +G +GA+G PG +G +G +G GP G GL GP+G +G G +G G KG G G PG G G G G G G G AG+DG G GLPG G GPAG G GE G G G PG G G G G GI+
Sbjct: 4 GAPGPQGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGAGIPG----------------------------DDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGND---------------------------GKPGEQGERGAVGEVGPTGSP---GPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGL---------------------------KGPRGEKGAKGDRGSKGPKG--GASGFPGKPGLPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGANGEPGSAGSPGTPGAMGPPGDSGSKGAAGII 345 HSP 3 Score: 60.8474 bits (146), Expect = 4.379e-9 Identity = 106/291 (36.43%), Postives = 133/291 (45.70%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGS------IGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ-GVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
+GPPG +G G+ G PG +G +G+ G +G GP+GQ G+ G G RG G +G G G +G+ GK G QG G GE G G G G PG G G G G G++GS G G G G GP G GLKG RGE G KG GS+GP+ G SG PG PG G GIPG G G+ G G+ G G +G PG G++GP G+ GA+ G+PG G+ G G +GP G+ G
Sbjct: 101 QGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGE------------------------VGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDR------GSKGPKGGASGFPGKPG---------------------LPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGAN---GEPGSAGSPGTPGAMGPPGDSG 337 HSP 4 Score: 59.6918 bits (143), Expect = 8.305e-9 Identity = 93/273 (34.07%), Postives = 112/273 (41.03%), Query Frame = 2
Query: 3245 GKTGASGAEGQPGVKGTKGDTG---ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPG--IAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGN---PGPKGETGLMGPIGPVGEDG 4039
GK+GA G +G GV GTKGD G +GPRG+ QG EG G GP G G+ G G PG G G G PGK G QG GE G +G RGP G I G+ G++GP GP G G GP G G G G PG+ G+R +G +G G G G++G PG G GPQG+RGN PG +GE G +G +GP G G
Sbjct: 1 GKSGAPGPQGSQGVPGTKGDRGEPGAVGPRGQ---------------------------------QGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGER------------------------GAPGKQGKQG------VSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQG------------------SRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPG 192 HSP 5 Score: 59.6918 bits (143), Expect = 1.028e-8 Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKG--VKGEYGIQGPRGPEGIAGVKGDIGIQGE---------------TGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
Y GA+G RG+ G +G G SG+ G +G+ G G + G+ G QGP GP+G GV G G G+ GP+G+ G+KG G+ G PG AG PG +G RG G G GE+
Sbjct: 59 YDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGER 179 HSP 6 Score: 58.9214 bits (141), Expect = 1.575e-8 Identity = 104/312 (33.33%), Postives = 127/312 (40.71%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLG---------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP----TGAPG---------------RIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQG 3337
+G G RGP+G G PG DG++G GP+G G +G +G PG G RGA+G G G+ G G RG G G G +GER G G G G +G+VG +GP G GP G+ G+ GE G G+ G+ G GS G G+ G PGSPG AG PG GPRGEKG KGD G GP +G PG R G+ GP G+ G G G PG++G G G G GE G
Sbjct: 81 KGNQGKRGPAGA-GIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGER------------------------------------------GNDGKPGEQGERGAVGEVGPTGSP---GPAGQPGVS---GEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGA------------------------PGLKGPRGEKGAKGDRGSKGPKGGASGFPGKPGLPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGANGEPG 319 HSP 7 Score: 56.6102 bits (135), Expect = 7.190e-8 Identity = 47/105 (44.76%), Postives = 55/105 (52.38%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDE---GSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GARG+ G +G G G G G GE G +G GE G G GP G GV G+ G G G RG+ G+ G G G PG AG PG+KG RG G +G G K
Sbjct: 150 GARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDRGSK 254 HSP 8 Score: 55.8398 bits (133), Expect = 1.447e-7 Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G+RG+ G G GD G +G G G+ G +G +G+ G +G G G+ GV G G QGE G GK G +G+ G+VG G G+PG G G G G DG
Sbjct: 107 QGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADG 207 HSP 9 Score: 53.9138 bits (128), Expect = 6.059e-7 Identity = 49/109 (44.95%), Postives = 57/109 (52.29%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGD---IGIQGETGPRGKDGNKGDEGSVGP----PGYAGNPGIKGSRGPVGNQGRDGE 2134
+G RG G G G GP+GQ G GE G G GE G QG G G+ G G G G GPRG+ G KGD GS GP G+ G PG+ G+ G G GRDG+
Sbjct: 176 QGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDRGSKGPKGGASGFPGKPGLPGNPGIPGIGGRDGD 284 HSP 10 Score: 51.2174 bits (121), Expect = 4.121e-6 Identity = 42/101 (41.58%), Postives = 52/101 (51.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGP---RGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
KGA G G +G +G GP GQ G +G G +G+ G G GP RG +G G +G+ G GE GP G G G G G G G PG +G +G G G
Sbjct: 122 KGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASG 222 HSP 11 Score: 50.8322 bits (120), Expect = 4.682e-6 Identity = 43/94 (45.74%), Postives = 51/94 (54.26%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G SGA G G G GT+G+ G G G G QG GP G AG KGD G G+ G G DG KG+ G+ PG G G+ G + GNQG+ G
Sbjct: 1 GKSGAPGPQGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGA---PGKQGKQGVSGEK---GNQGKRG 88 HSP 12 Score: 50.8322 bits (120), Expect = 5.275e-6 Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G G +G G G GP GQ G G G G KG+ G G G G G KG+ G G+ G +G G KG++G GP G AG PG G +GP G QG G
Sbjct: 12 QGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAG-AGIPGDDGRQGPPGPQGSRG 111 HSP 13 Score: 50.447 bits (119), Expect = 6.928e-6 Identity = 81/194 (41.75%), Postives = 93/194 (47.94%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAG 3067
RG G GP+G PG G G G G G G RGQ G+ G G+ G G GP G G KG RG+ G +G G KG + G +G G G PG+ G G+ G G GP GE G GL G G G GP GEKG G G G GT G +G G GS+G G+ GEPGSPG G
Sbjct: 179 RGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRGEKGAKGDRGSKGPK-----------GGASGFPGKPGLPGNPGIPGIGGRDGDMGPAGEDGRPGLSGLPGLRGQSGPAGEKGANGEPGSAGSPGTPGAMGPPGDS------GSKGAAGIIGEPGSPGPRG 355
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Nematostella
Match: EDO42241 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S288]) HSP 1 Score: 103.219 bits (256), Expect = 6.082e-22 Identity = 207/552 (37.50%), Postives = 250/552 (45.29%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGP------TGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEV---------GIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGT---------KGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGV---------EGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG +GP GL G+P G+ G+ GP+GD G G+ G GP G GA G +GP G +GS G +G+ GPQG G KG+ RGL+GR+G G +G GEKG GP G G GT G G +GS G G G RGP G G G PG AG G G+ G QG G G G G+ G+ G G+KG +G+ G GP G PG G G PG+ GA GA G+P + KGD G GP+G QG +G G GS G +GG+G G +G G G GV GE G G G KG+ G GLPG G GP G G GPPG G+ G G G G G+ G QG AG G+ G G++GD+G PG GN G G G G +G G G+ G PG+ G +G+ G PG G G +GEPG G G GKRG PG +GE G G G GE G
Sbjct: 157 RGTPGAKGPPGLAGEP---GEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGPKGQQGPQGAEGFKGD------------------------------------------------RGLIGRRGPKGNLGEKGEKGAEGPGGVEGKNGTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAPGPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIGPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPG------------------------ARGDYGERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKRGAPGAQGERGPRGEQGKQGEKGH 633 HSP 2 Score: 77.7962 bits (190), Expect = 4.037e-14 Identity = 187/554 (33.75%), Postives = 230/554 (41.52%), Query Frame = 2
Query: 2516 GLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGV---SGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGL---IGPTGAPGRI---GEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGI---------------------------AGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGE---PGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLM------GPIGPVGEDGE 4042
G+PG PG G G+ G KG G G+ G PG QG RG G G GE G G G G GP G +G+ G G G KG GP G +G KGD G +G+ G KG GE G KG+EG G+ G G G +GEPG+ G G G G+QG++G G GP G+ G G PG G+ GV+GD G+ GPTG GR G+ G G+ G +G +G+PG G +GD G G G G S G G G GPQG EG G +G G +G GP G GPVG G + G+PG G G G +G G G +GDRG G+ G G+ G NG IG P G G GS GL G+ G+ PG+ G G++G+PG G G +GEPG PG G G+RG PG G GL G GP+G DG+
Sbjct: 146 GIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQ---------------------------------------------PGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEKGAEGPGGVEGKNGTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAPGPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPG---KPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGAN------------------------GVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIG------------------PQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGK 609 HSP 3 Score: 72.4034 bits (176), Expect = 1.667e-12 Identity = 180/510 (35.29%), Postives = 217/510 (42.55%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGA------------------RGQSGPTGELG------SKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT 3955
GT G +G G+PG DG GS G GD G RG +G PGPQG+ G G+SGPTG G KG RG+ GP GP G G G G G G G G S + G+ G GP G +G G GR+GS+G G G +G GP+G G G G G G G+ G G+ G +G G G PG+ G+ G +G G G GP G G +G G+ G G+ G +G G G G G+ G+ G PGK G GA G G G +GD G G G G D G G G G+ G PG G G G GP+G G G PG G +GP G G QGE G G+ G G G G++GP GP+G GP+G G+PG G G G GEPGQ+G R +G G G G G G PG GLT
Sbjct: 269 GTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAPGPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIGPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRD---------------------------GSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKR------------------------GAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGA------------PGPVGNAGSPGSPGPSGPKGDSGEPGQQGPRGTQGSDGKRGANGNPGIPGVPGDAGLT 715 HSP 4 Score: 67.0106 bits (162), Expect = 7.118e-11 Identity = 167/473 (35.31%), Postives = 209/473 (44.19%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGK---------------PGIDGKEGSIGPKG------DLGPRGQSGNPGPQGIRGARGQSGPTGELGS---------------------KGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---------------------GEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMG 3715
RGP G GP GLPG PGI+G+ G G G D G RG++G GPQG GA G+ G G G+ KGD G+ GPQGP G +G G GS G G GP G G G G G G G G G GE G GL G +G+ G G D G+KG+ G G+ G G +G G GS GL G +G QG+ G+PG+PG AG+ G G +GD G G GAPGR G PG+ G G G PG+ G +G+ G GP G DG G G++G +G RG+ G+QG G++G G +G GI PG +G +GP+G PGPVG +G G G GP G G+ G QGP G G+ G+ G G+ G PG+ G+ G
Sbjct: 298 RGPAGAPGPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIGPQGRAGAPGS---PGLGGQKGDQGMPGKPGNPGAAGLRGA------------------------------PGARGDYGERGEPGAPGRDGS---PGQRGVPGVPGIPGLAGMQGEPGAQGP---MGADGKRGAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGI---PGEQGPMGPVGAPGPVGNAGSPGSPGPSGPK---------------GDSGEPGQQGPRGTQGSDGKRGANGNPGIPGVPGDAG 713 HSP 5 Score: 62.3882 bits (150), Expect = 1.668e-9 Identity = 140/385 (36.36%), Postives = 167/385 (43.38%), Query Frame = 2
Query: 2936 LGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGD---------AGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXX---XSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGED 4036
+G GL G RG+ G G++G GL G G G G G PGD +G NG G G G +G G +G G GQ GP+G +G KGD GLIG G G +GE G GAEG GV+G G G GP GE G D GP+G G LG QG G G GP GLPG G G GD G G PG+ G++G G AG +G G+ G RG+ GP PG AG G G +G G G G+ G G +G +G+ G G GER KG +GS G +G G+ G PG PG G G+ G G G G G G GED
Sbjct: 145 VGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGE------KGEKGAEGPGGVEGKNGTDGAAGPAGEPGAD---------------------------GPRGSPGALGDQGERGPAGAPGPQGLPG---------------TAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGED 481 HSP 6 Score: 60.077 bits (144), Expect = 9.804e-9 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGI------QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G RG G G G+ GPSG+ G G G GV+G+ G +G +GP+G G KGD G+ G GP+G G KG++G+ GP G G G G+ GP G G DG +
Sbjct: 178 QGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEKGAEGPGGVEGKNGTDGAAGPAGEPGADGPR 286 HSP 7 Score: 59.6918 bits (143), Expect = 1.263e-8 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGT---------RGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVG 2113
GA G+RG+ GA+GD+G G+ G RG G+ G+ G G+QG +GP G G +G G QGE GPRG+ G +G++G G G G PGI G +GP+G
Sbjct: 548 GAAGLRGAPGARGDYGERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKRGAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMG 653 HSP 8 Score: 55.0694 bits (131), Expect = 3.441e-7 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G +G GA+G GP+G GT G G +G G+ G G +G +G AG G +G++G G G G GD G GP G AG G +G+ G VG+ G G +
Sbjct: 901 GAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYR 1002 HSP 9 Score: 53.9138 bits (128), Expect = 6.870e-7 Identity = 86/284 (30.28%), Postives = 114/284 (40.14%), Query Frame = 2
Query: 2516 GLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGI---RGARGQSGPTGELGSKGDRGK------FGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGL 3340
G PG G+ G +G GP GD G G G+PG G+ RG RG+ G G+ GS+G RG+ GP G TG +G+ + + +G G GR G+ G IGP G +G G G G GT G G +G+ G+ G G +G +G +G PG+ G +G++G G GP G GR +GP G G GAEG G+ G G+ G G G QGL
Sbjct: 797 GRPGPVGLPGPQGPAGPDGDHGMDGAKGDPGAAGVNGLRGPRGKPGRNGKDGSRGKRGEDGRPGAVGPPGKTGPRGK-------------------------------PGLQFGKELMFVCWQGDPGEPGRDGTPGAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLG------------------------------------LEGLRGRTGAQGPIGDRGR---SGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGL 1010 HSP 10 Score: 52.7582 bits (125), Expect = 1.505e-6 Identity = 47/105 (44.76%), Postives = 58/105 (55.24%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVG---TRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G RG RG+ GAKG G +G+ G T+G G G GE G GP G G G G G++G+ G G G KG +G G G+ G+ G+ G RGP GN G GEK
Sbjct: 152 GKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEK 256 HSP 11 Score: 52.7582 bits (125), Expect = 1.596e-6 Identity = 81/187 (43.32%), Postives = 97/187 (51.87%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIG------PDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQ 3028
RG PG G G GK G DG+ G++GP G GPRG+ G + + Q P GE G G G GPQGP G +G +G GS G G G G G G+ G KG KG GNPG G+ GL GR G+ GPIG P G G+ G G GL G GE G +G+ G+ GL G RGP+
Sbjct: 838 RGKPGRNGKDGSRGKRGEDGRPGAVGPPGKTGPRGKPGLQFGKELMFVCWQGDP-GEPGRDGTPGAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTL------GLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPE 1017 HSP 12 Score: 52.373 bits (124), Expect = 1.874e-6 Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNK---GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+GA+G +G +G+ G G G GT G+ G GVKG G G G G+ G++G G QG G RG+ G K G++G+ G G G+ G KG RG G QG G++
Sbjct: 909 QGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKR 1014 HSP 13 Score: 52.373 bits (124), Expect = 2.294e-6 Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G+RG GA G GP GQ G + G +G KG+ G+ G RGP+G G KG+ +G GP G +G G +G+ GP G G G +GS G +G+QG G
Sbjct: 209 GVRGQPGAIGSPGPKGQQGPQ---GAEGFKGDRGLIGRRGPKGNLGEKGE---KGAEGPGGVEGKNGTDGAAGPAGEPGADGPRGSPGALGDQGERG 299 HSP 14 Score: 51.2174 bits (121), Expect = 4.316e-6 Identity = 71/212 (33.49%), Postives = 86/212 (40.57%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRG------------EVGIKGSE------GKTGLMGSRGPQGVSGEPGSPGDAGV 3070
G PG GP G G G G GS G G G RG G PG G++G +G +G G LG +G RG+ G QGP GD+G G KG G G +G+ G +G GEKG G G+ GL+G RG E G KG + G G G+RGP G G+ G PG G
Sbjct: 898 GTPGAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGR------------------------------------------SGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGRPGPRGF 1067 HSP 15 Score: 50.8322 bits (120), Expect = 5.329e-6 Identity = 49/122 (40.16%), Postives = 59/122 (48.36%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP---------PGYA------------GNPGIKGSRGPVGNQGRDG 2131
KG +G +G+ G KGD G G+ G +G +G KG KG G G G G G G G G GPRG G GD+G GP PG A G+PGI+G GP G GR+G
Sbjct: 223 KGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEKGAEGPGGVEGKNGTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAPGPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNG 344 HSP 16 Score: 50.0618 bits (118), Expect = 9.614e-6 Identity = 48/131 (36.64%), Postives = 60/131 (45.80%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMK--------------------GVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGI---------KGSRGPVGNQGRDGEK 2137
G+RG RG G G GP G+ G RG+ G++ G G G QGP+G +G G G G G G RG G G G G GYAGNPG G++GP+G++GR G K
Sbjct: 848 GSRGKRGEDGRPGAVGPPGKTGPRGKPGLQFGKELMFVCWQGDPGEPGRDGTPGAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPK 978 HSP 17 Score: 50.0618 bits (118), Expect = 9.696e-6 Identity = 44/99 (44.44%), Postives = 52/99 (52.53%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GI G G +GD G G +G G+ G GE G QGPRG GD+G GE GP G++G G + GPPG G PG GS GP G QG G +
Sbjct: 146 GIPGLPGKRGDRG---TPGAKGPPGLAGEPGEPGTQGPRG------DPGDVGEPGEAGPSGRNGANG---TAGPPGVRGQPGAIGSPGPKGQQGPQGAE 232
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Nematostella
Match: EDO30432 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T0T5]) HSP 1 Score: 97.8265 bits (242), Expect = 3.450e-21 Identity = 179/514 (34.82%), Postives = 217/514 (42.22%), Query Frame = 2
Query: 2519 LPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT---RGEVGIKGSEGKT---GLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
PG G+ G G+ G KG G RG G PG +G RG +G G G G G GK GP+G TG +G KG+RGL G KG +GP G G +G +GP G GLKGT RG G+KGS G T G G+RGPQG+ G G G G+ G +G+KG G GP G GR G G PGK SG G PG G G G +GPRG +GL G G G++G +G G G G G+ G PG KG+ G G GP G G G G GL+G G G QG G+ G +G G G G RG GP G G G +G G G GP G G +G RG+ G+ G+ G G+ G++G G G G G GP GL G +G RG GP+G+TG GP G G G+
Sbjct: 17 FPGPRGLRGYTGARGLKGARGYRGWRGLPGQRGYRGLKGAKGQRGLRGLTGATGKQGPRGWTGARGP---------------------------------------------KGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLT------------------------------GPRGLKGARGATGPRGYTGRTGLRGVPGK---SGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQGL------------RGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLR------------------------GPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPRGFTGKQGLRGVPGRTGKTGANGK---PGLRGPQGLKGLKGKTGATGPRGLRGLKGSRGWTGPRGKTGATGPQGLRGYRGK 413 HSP 2 Score: 94.3597 bits (233), Expect = 4.335e-20 Identity = 170/501 (33.93%), Postives = 199/501 (39.72%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGK------TGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGK 3970
RG PG RG GL G G G G G G GPRG +G GP+GIRG RG GP G G KG RG GP+G G KG G +G G KG RGL G +G G GP G +G G GK GLKG RG G +G G+TGL G G G +G PG G G G G +G +G G G GA G+ G G G+ G +G G+PG KG G G GPRG +GL G GN G +G++G G+QG PG+ G G G PG G G G G G G+ G+ G GL+GP G +G QG G G G G G G RGP GL G G+ G G R L+G+KGS G G G G GP GL G +GK
Sbjct: 42 RGLPGQRGYRGLKGAKGQRGLRGLTGATGKQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGT------------------------------------TGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAK---------------------------GAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLR---------------------GPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGA------------RGKIGPRGFTGLKGAKGVRGATGLRGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQ---------------------------------GLKGLKGKTGATGPRGLRGLKGSRGWTGPRGKTGATGPQGLRGYRGK 413 HSP 3 Score: 62.003 bits (149), Expect = 1.129e-9 Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +GIRG G KG GP G G+RG +G +G++G G G RG G+ G +G G QG+TG RG G +G G G PG G G+KG+RG G +G G
Sbjct: 81 RGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGR 182 HSP 4 Score: 60.4622 bits (145), Expect = 3.828e-9 Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---------PEGIAGVKGDIGIQGE---------TGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG RG+RG +GA G GP G G RG G++G++G G GPRG P G+ G+KG G +G TGP+GK G +G +G G G+ G PG+ G RG G +G G +
Sbjct: 57 KGQRGLRGLTGATGKQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPR 177 HSP 5 Score: 60.077 bits (144), Expect = 5.377e-9 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G+RG RG G++G GP G+ G RG G++G +G G G GP G+ G +G G +G TG G G G G G PG G PG KG+ GP G +G G K
Sbjct: 121 GSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSK 222 HSP 6 Score: 60.077 bits (144), Expect = 5.377e-9 Identity = 101/286 (35.31%), Postives = 129/286 (45.10%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGD---LGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGT---RGEVGIKGSEGKTGLMGSRGP------QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDT 3307
RG PG G +G PGK G G +G++GP+G G +G G G QG+RGA G+ G G G G +GK G +G TG +G RG G QG +G+RGL G +G G G +G KG G G+TG +G RG G+KG++G G G RGP QG+ G PG G G NG+ G +G QG KG+KG G GP G G G G G G +GA G G++G +G T
Sbjct: 186 RGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQG------------------------------------NQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQG---------------------LKGLKGKTGATGPRGLRGLKGSRGWTGPRGKTGATGPQGLRGYRGKT 414 HSP 7 Score: 58.151 bits (139), Expect = 1.771e-8 Identity = 49/112 (43.75%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY---------AGNPGIKGSRGPVGNQGRDGEK 2137
KGARG RG G G G G G +G+ G++G+ G G QGPRG G G KG G++G GP G G KG G +GP G G G+KGSRG G QG+ G +
Sbjct: 33 KGARGYRGWRGLPGQRGYRGLKGAKGQRGLRGLTGATGKQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGAR 144 HSP 8 Score: 56.9954 bits (136), Expect = 3.873e-8 Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGM------KGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
KG+RG+ G G G GP G G RG G +G+KG G GPRG G G++G G G G GK+G G +G++GP GY G G KG+RG G QG
Sbjct: 129 KGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQG 232 HSP 9 Score: 55.0694 bits (131), Expect = 1.527e-7 Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGP------RGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G RG++GS G G G G GT G G +G+KG G+ GP RGP+G+ G +G G G TGPR G KG G+ GP GY G G++G G G G G+
Sbjct: 97 GPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPR---GLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGK 200 HSP 10 Score: 54.6842 bits (130), Expect = 2.104e-7 Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
KGA+G+RG++G +G G +G+ G RG G G G G G RGP+G+ G+KG G TGPRG G KG G GP G G G +G RG
Sbjct: 321 KGAKGVRGATGLRGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQGLKGLKGKTGA---TGPRGLRGLKGSRGWTGPRGKTGATGPQGLRG 409 HSP 11 Score: 53.1434 bits (126), Expect = 7.786e-7 Identity = 43/96 (44.79%), Postives = 54/96 (56.25%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G GAKG GP G G G G +G +G+ G++G G G GV G G +G+TG RG G +G G GP G G G+KGSRG G G++G K
Sbjct: 202 GRPGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAK 297 HSP 12 Score: 51.9878 bits (123), Expect = 1.530e-6 Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGET------------GPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G +G +GA G G G++G RG G+KG KG G G RGP G G +G G+ G T GP+G G KG G+ GP G G+KGSRG G +G+ G
Sbjct: 295 GAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQGLKGLKGKTGATGPRGLR---GLKGSRGWTGPRGKTGA 401 HSP 13 Score: 50.447 bits (119), Expect = 5.223e-6 Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 2
Query: 1829 KGARGIRGSSGAK------GDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGP---EGIAGVKGDIGIQ---GETGPRGKD---GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
KGARG RG G + G +G G+ G++G+ G +G G G++G RGP +G+ G+KG G+Q G+ G +G++ G G G +GP G+ G G KG RG G +G
Sbjct: 222 KGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRG 334 HSP 14 Score: 49.6766 bits (117), Expect = 8.186e-6 Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGE---------------TGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+G +G+RG++G G +G G+ G++G+ G +G G G++G RGP+G + G+KG G+QG TG RGK G +G G G G G G++G RG G QG
Sbjct: 228 RGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPRGFTGKQG 343
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Medaka
Match: ENSORLT00000038463.1 (pep primary_assembly:ASM223467v1:6:10563937:10584228:1 gene:ENSORLG00000026346.1 transcript:ENSORLT00000038463.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 113.235 bits (282), Expect = 2.880e-25 Identity = 179/502 (35.66%), Postives = 223/502 (44.42%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKT---GLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGP---------------PGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPG 3949
G +GP G PG G +G G +GPKG G G G PGPQG +G G GP G++G KG +G GPQG G G +G KG G G KG GP GP GE G GP G + G +G +G++G KG++G G G +G G G G PG +G G KGD+G GPT G +G GP G G+ G +G G +G KG G LGP+G+ G GP G KG G G QG GN+G G +GE+ GP G KG++GP GL G +G++GP G+ G PGP G G G G G+PG G G QGP G G QG+ G+ G +GP PG+ G++G GP G +G+ +GL G G GQKGE KG KG G +G GS EPGPPG
Sbjct: 112 GHQGPIGQPGIKGSEGPRGYMGPKGSNGIPGMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQKGQMGSKG------------------------------------------SKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGT---------------------------------PGAKGDMGPQGPT---GDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEM---GPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGL---------------------------QGLKGDKGAKGQKGEIGEKGTKGDLGPMGVKGSAAEPGPPG 505 HSP 2 Score: 100.523 bits (249), Expect = 4.150e-21 Identity = 143/441 (32.43%), Postives = 187/441 (42.40%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGP------RGQSGNPGPQGIRGARGQSGPTGELGSK------------GDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDI---GLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGI 3745
+G G GP GL G+ G G +G GP+G GP +G G+ GP+G +GA+GQ GP GE+G K G +G GPQGPTGD G + GP+G G +G++G +G++G G IGP G KGDVGP G GT+GE+G G++G G MG +GPQG +G G+ G+ G N G+KGD+ GL G G+ G GE GPPG G G +G G G G G LGP+G +G + G QG +G+ G QGP G +G GP G PG +PGL G G GP G G QG G++G +G G G G +G GP+G+
Sbjct: 186 KGSKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTGDLGPQ------------------------------------GPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQG----PGTKGEMG--GTKGAVGAMGPQGPQGNTGAMGAKGEMGPN---------------------------------GLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKG---------------------------DVGQQGQKGDTGPQGPKGNEGSQGPTGTPG------------------------------NPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQKGEIGEKGTKGDLGPMGV 494 HSP 3 Score: 96.6709 bits (239), Expect = 5.862e-20 Identity = 156/411 (37.96%), Postives = 193/411 (46.96%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR---GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE------RGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP------GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
KG G+ G G+ GP GP GE G GP GK GLKG +G++G +G +G+ G GS+ GP+G+ G+ G G G G G PGP KG +G G IGP GA G G+ GP G+ G G +G PG+ GT G G +GP+G G G QG G+ G QG++G++G QG G G LGP G GP G G+ G G G QGP G +G G GE +GD GP G+ GNMG GP G IG GP G G GP G G G G G +G G VG+ GQKG+ +G KG+ G+ G G+ G P GPPG TG G +G G KG G G IG G G+
Sbjct: 135 KGSNGIPGMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQKGQMGSKGSKGEMGPKGLKGQTGPQGPKGET---------------------GPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTG------------------DLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGP------------------GTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQKGEIGEKGTKGD 488 HSP 4 Score: 84.3445 bits (207), Expect = 5.036e-16 Identity = 138/377 (36.60%), Postives = 166/377 (44.03%), Query Frame = 2
Query: 2948 GLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGS------PGTIGAVGSKGEPGPP------GLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G +G G+ GIKGSEG G MG +G G+ G G+PG G GE G +G G +G GA G IG G G+ G+ G++G+ G KG KG TG GP+GE G +G G G QG G+ GP+G +G G QGP G GE G GLPG GT PG G G QGP G G QG G G +G G G G +G GP+G G GP+G G G G G +G G G G KGE G+KG G +G+ G KGE GPP GL GP G GNPG KG+ G GP G VG+ G+
Sbjct: 112 GHQGPIGQPGIKGSEGPRGYMGPKGSNGIPGMCGTPGPQGPQ------------------------------GEIGAQGPKGKMGLKGAKGDIGPQGQKGQMGSKGSKGEMGPKGLKGQTGPQGPKGETG---------PQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGT---------------------------PGAKGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQ 422 HSP 5 Score: 65.855 bits (159), Expect = 2.994e-10 Identity = 61/164 (37.20%), Postives = 76/164 (46.34%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGS 2989
G +GPSG PG PG G G GPKGD+G +GQ G+ GPQG +G G GPTG G+ G +G GP GPTGD G + G++G G KG G IG G KGD+GP+ G+KG+ E G G+
Sbjct: 391 GLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQ---------------------------------------------GLKGDKGAKGQKGEIGEKGTKGDLGPM---GVKGSAAEPGPPGT 506 HSP 6 Score: 65.4698 bits (158), Expect = 3.290e-10 Identity = 56/123 (45.53%), Postives = 66/123 (53.66%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSG------QVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGD---------EGSVGPPGYAGNPGIKGSRGP------VGNQGRDGEK 2137
GA+G G +G KGD GP G G +GE+G G KG G+QGP G G G KGD+G QG G G+ G KGD EGS GP G GNPG+KG GP +G QG G+K
Sbjct: 349 GAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQGLKGDK 471 HSP 7 Score: 65.0846 bits (157), Expect = 5.189e-10 Identity = 97/282 (34.40%), Postives = 128/282 (45.39%), Query Frame = 2
Query: 3233 AGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR------KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPK------GETGLMGPIGPVGEDGE 4042
GP G+ G G GQPG+KG++G G +GP+G G+ G G GPQG +GE+G QGP G+ KG++GP G G +G S G G+ G +G G +G QG GE G +GPPG + N G +GP G IG PKG++G G+ G G+ GE+ LKG+ G GT GA G G GP G GPQG +G+ G + G+ GL G IGP+G G+
Sbjct: 105 PGPKGERGHQGPIGQPGIKGSEGPRGYMGPKGSNGIP---------------------GMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQKGQMG---------------------------SKGSKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIG------------------------PKGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGD 314 HSP 8 Score: 63.929 bits (154), Expect = 1.204e-9 Identity = 106/291 (36.43%), Postives = 134/291 (46.05%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGP---IGPDG------------------EKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGT 3295
+GP G G GL G PG+ G G+ KGD+GP+G +G+ GPQG +G G G G++G +G +G GP GP GD G +G G G G +G G G+ G G G GP G G+ G +GL G GS GP IGP G +KGD+GP G G G +G+ G G +G G GS+GP G G PG GD G G G+ G +G+KGD G G G G G G G G G+ +PG GT
Sbjct: 243 QGPKGEMGEKGLKGLPGLSGTPGA---KGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGL------------------------QGLKGDKGAKGQKGEIGEKGTKGDLGPMGVKGSAAEPGPPGT 506 HSP 9 Score: 62.003 bits (149), Expect = 4.635e-9 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGT---RGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KG+ GI G G G GP G++G +G++G+KG KG+ G QG +G G G KG++G +G G G G KG+ G GPPG + N G +G +G +G +G G K
Sbjct: 135 KGSNGIPGMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQKGQMGSKGSKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAK 240 HSP 10 Score: 61.6178 bits (148), Expect = 6.259e-9 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 2
Query: 1847 RGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+G+ G KGD GP G G +G+ G KG GE G++G G G G KGD+G QG TG G G KG EGS G G G G+KG+ GP+G +G
Sbjct: 222 KGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKG 313 HSP 11 Score: 60.077 bits (144), Expect = 1.877e-8 Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVG-MKGVKGEYGIQGPRGPEGIAGVKGDIG---IQGETGPRGKDGNKGD---EGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G G G KGD GP G GT+GE+G KG G G QGP+G G G KG++G ++G+ GP+G GN G +G +GPPG GN G++G G GN G+ G+
Sbjct: 300 QGLKGAIGPLGPKGDVGPQG-PGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGD 407 HSP 12 Score: 58.5362 bits (140), Expect = 4.861e-8 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+G +G G+ GAKG+ GP+G +G++G +G+KG G GP+G G G KG+ G+QG +G G G KGD G GP G G G KG GP G +G +G +
Sbjct: 339 QGPQGNTGAMGAKGEMGPNG---LKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQ 438 HSP 13 Score: 58.151 bits (139), Expect = 7.148e-8 Identity = 48/109 (44.04%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSG------QVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G G G+ G KGD GP G Q G +G+ G +G KG G QGP G G G+KGD+G G TG G G KGD+G+ G G G G KG GP+G +G E
Sbjct: 392 LQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQKGEIGEKGTKGDLGPMGVKGSAAE 500 HSP 14 Score: 57.3806 bits (137), Expect = 1.024e-7 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGP---EGIAGVKGDIGIQGETGPRGKDGNK---GDEGSVGPPGYAGNPGIKGSRGPVGNQG 2122
+G +G GS G+KG+ GP G +G+ G +G KGE G QGP GP +G G KGDIG +G G +G+ G K G++G G PG +G PG KG GP G G
Sbjct: 177 QGQKGQMGSKGSKGEMGPKG---LKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTG 277 HSP 15 Score: 57.3806 bits (137), Expect = 1.079e-7 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+ G+ GA G GP G G G +G KG G G++G GP+G+ G G G +GE GP G GN+G +G G PG G G G +GP G+ G+ G+K
Sbjct: 326 MGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGEIGPPGPKGNEGLQGPSGTPGNPGQKGDLGPQGPKGDVGQQGQK 423 HSP 16 Score: 56.9954 bits (136), Expect = 1.713e-7 Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGV---------KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
+G +G G G KG GP G +G +G G+ G+ +GE G QGP+G G+ G KGDIG QG+ +G+ G+KG +G +GP G G G +G +G G QG G
Sbjct: 111 RGHQGPIGQPGIKGSEGPRGYMGPKGSNGIPGMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQ---KGQMGSKGSKGEMGPKGLKGQTGPQGPKGETGPQGPPG 217 HSP 17 Score: 54.299 bits (129), Expect = 9.020e-7 Identity = 50/118 (42.37%), Postives = 62/118 (52.54%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGP---------SGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGP------PGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA+G +G G KG+ G SG G +G++G +G G+ G QGP+G EG G+KGD+G QG G G G KGD G GP G G G G +GP GN G G K
Sbjct: 234 KGAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAK 351 HSP 18 Score: 53.5286 bits (127), Expect = 1.916e-6 Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 1826 YKGARGIRGSSGAKGDHGPSGQVGT------RGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG G+ G+ GAKGD GP G G +G G +G+KG+ G QG +G G G KGD+G QG G KG G++GP G GN G G++G +G G G+
Sbjct: 254 LKGLPGLSGTPGAKGDMGPQGPTGDLGPQGPKGHEGSQGLKGDMGQQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGD 362 HSP 19 Score: 52.373 bits (124), Expect = 3.577e-6 Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G GS G KGD G Q G +G +G G KG+ G QGP + G KG +G G GP+G G G +G +GP G G+ G +G +G +G+ G GE
Sbjct: 282 QGPKGHEGSQGLKGDMG---QQGLKGAIGPLGPKGDVGPQGPGTKGEMGGTKGAVGAMGPQGPQGNTGAMGAKGEMGPNGLKGDMGPQGLKGNMGSTGPKGE 380
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Medaka
Match: col1 (collagen type I alpha 1 [Source:NCBI gene;Acc:100144368]) HSP 1 Score: 113.62 bits (283), Expect = 1.306e-24 Identity = 218/555 (39.28%), Postives = 256/555 (46.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPG---PQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGD---------------------RGPPGIAGNMGQRGPNGPIGI---------VXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER---YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG+ GP+G G PG G G +GPKG G G++G PG +G+ G+ G GP G+ G G G+ G GP G G RG PG G PGP G G G + G RG++G GP G G+ GD GP G +G G GE G +G G G G GPQG GEPG PG+ G+ G+ G G G +GD G G GAPG +G AG G G++G +G G G G G GP G QG+ G RG G G G+ G QG +G G G G +G GPIGLPGP G G G+ GA GP G +G G G G G PG AG GP G G G GE G+ +GP G G G RGP GP G VGP GP G PGP GP G G GPKG+RG G G PG+ G G KGSPG GA GS G PGP G+ G +G G PG +GE G G GP GE G+
Sbjct: 382 RGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAG------------------------KPGERGVMG---PTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGL------------------------TGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGM------------PGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAGKEGPKGNRGETGPAGRPGEVGAAGPPGPSGEKGSPGADGAPGSAGLPGPQGIAGQRGIVGLPGQRGERGFPGLPGPAGEVGK 873 HSP 2 Score: 94.3597 bits (233), Expect = 9.997e-19 Identity = 166/395 (42.03%), Postives = 195/395 (49.37%), Query Frame = 2
Query: 2921 GDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGER---------------GDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSR---GLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP---IGPVGEDGE 4042
G+VG G G G +GE G G++G G G G +G GEPG+PG G G++G+ G G G G G G GE+G G +G G TG PGR GE G PG G +G+ G PG G G G G G G G +G G G+ G G G G G G +GV G G G PG+ G+ GP G GP G +G G+ G G PG G G G +G PG PG+ GL G AG G G G+R G RG PG AGN G +G G G G GP G G G G G PG +G R G G G PG+ G R L G G PG GA G KGEPG G GP G RG PG +GE+G GP GP G DG+
Sbjct: 323 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGA------PGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQ 711 HSP 3 Score: 91.6633 bits (226), Expect = 5.419e-18 Identity = 177/508 (34.84%), Postives = 209/508 (41.14%), Query Frame = 2
Query: 2507 GPSGLP---GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---PGPPGLTGPQGKRGNPGPKGETGLMG 4012
G G P G+PG G+ G+ G +G G G+ G G +G GA G G GE G+ G RG G GP G KG G G G G G+ G G GE G+ G G GS G GPDG+ G G G+ G G G VG + G+ G+MG GP+G +G+ G PG+ GV G G G G G +GP G G G G RGE+G G G G G G IGE G PG+ G G G PG+ G +GD G G RG G GP G G G G G KG+ G G PG G PGL G G +G AG G +G+ G++G +G G G G RG GPIG L G G PG KGE G G G GA G +GE PGP G GP G G PG KGE+G G
Sbjct: 323 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKG---------------------APGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGAR---GQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPG---------------------------PVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGP---------------------------PGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIG------------------------------LPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENG 722 HSP 4 Score: 82.8037 bits (203), Expect = 2.935e-15 Identity = 122/413 (29.54%), Postives = 174/413 (42.13%), Query Frame = 2
Query: 3833 LDGKVGEPGQKGERYLKGIKG---------SPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPV---GEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYK--RSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQ---QGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVD-HTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLE--TTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
L G GE G+ GER +KG +G G G G G GP G GP G G PG G +GL GP GP G GE G AGP GP GP G PG G D G I P E + ++ R+ A D + + + ++ +I++IR P G K+ ARTC D+K+ G+Y+IDP++G +D+I+V C E +TC+S ++ Q Y K + + W +G S+ D + Q+ FLR ++++ Q + + C SV Y D+ K A +L + I R F ++ DGC T G+ K ++ T+ S LPIID D GL V +CF
Sbjct: 965 LRGDKGETGEAGERGMKGHRGFTGMQGPPGPSGPPGEQGPAGSAGPAGPRGPAGSAGVPGKDGMSGLPGPTGPPGPRGRSGEMGPAGPPGPPGPAGAPGAPGGGFDLGF--------------IAQPQEKAPDPFRMFRADDANVLRDRDLEVDSTLKSLSQQIEQIRSPDGTRKNP-ARTCRDLKMCHPDWKSGEYWIDPDQGCTQDAIKVYCNM-ETGETCVSPTQREVAQKNWYISKNIKEKKHVWFGETMNDGFQFEYGSEGSLPEDVNIQLTFLRLMSTEASQNLTYHCKNSVAYMDAAA---GNLKKALLLQGSNEIEIRAEGNSR---------------------FTYSVLEDGCTSHT-GTWGKTVIDYKTSKTSRLPIIDIAPMDIGAP-DQEFGLEVGPVCF 1335 HSP 5 Score: 82.0333 bits (201), Expect = 5.576e-15 Identity = 173/493 (35.09%), Postives = 202/493 (40.97%), Query Frame = 2
Query: 2597 GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPI------GLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP---GPPGLTGP---QGKRGNPGPKGETGLMGPIGPVGEDG 4039
G PGP+G G G G GE G+KG+ G G QGP G G E+G RG G G+ G G GE+G G G G+ G G KG+ G+ G G GP+G +GEPG G+ G+ PG G G G G G GP GAPG+ G GPPG GA G G G G KG G G GE+G+ G G G G G+SGPQG G GP G +GE GP GLPGP G G PGK G QG G +G G G RGDRG P G+RG GP+G G G G G G G G PG G++G G G PG++G L G++G G GA G+ G P G GLTGP G G PG KGE G GP+GP G G
Sbjct: 314 GAPGPKGNNGEVGAPGAKGEPGAKGEAGAPGAQGPPGAHG---------------------------------------------EEGKRGARGEPGAPGARGAPGERGAP---GGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGL------------------------PGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGV------------MGPTGPAGAPGKDGDSGPQGPSGP---SGPAGERGEQGPAGAPGFQGLPGPQGAI---------------------------GEPGKPGEQGLPGDAGAPGLTGARGDRGFP------GERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARG 686 HSP 6 Score: 71.2478 bits (173), Expect = 8.720e-12 Identity = 160/431 (37.12%), Postives = 190/431 (44.08%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPLG--------KTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGV--------KGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPR---GEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGE---------------LGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP---GPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
G GL G KG G G DG KGD GP G G G G G KG G G G GP G GEPG+PG AG G + P + P + G++G G G PG GEAG PG G GA G+ G +G +G+ G G R GE+G G G GS G G +G PG +G+ G GP+G GE G G PG G+ GP G PG G GP G GA G PG G G G G G PG+ G+ GP G +G G+ G+ G +GP G +G G+RG GP G G G G G +GEPG+ GE+ L G G+PG GA G +G P G PG GP G RG+PG G G G G G G
Sbjct: 199 GTPGLPGIKGHRGFSGLDGAKGDTGPAGPKVSGPTGPAGPPGFPGGPGAKGEIGPQGARGPEGPAGARGEPGNPGPAGPAGPSVSMKLECFGAPGAAGAPGFPGPRGPPGPQGAGGAPGPKGNNGEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLP---------------------GPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPG 608 HSP 7 Score: 59.3066 bits (142), Expect = 3.934e-8 Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GS GA+G G G G +G G G GE G+ GP GP G G GD G QG +GP G G +G++G G PG+ G PG +G+ +G G+ GE+
Sbjct: 458 GSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGA---IGEPGKPGEQ 550 HSP 8 Score: 55.4546 bits (132), Expect = 6.104e-7 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+GA G+ G G +GD G G G G+ G +G+ G G+ GP G G G G G G G RG G +G+ G GP G+AG PG G G G G +G K
Sbjct: 622 RGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAK 724 HSP 9 Score: 54.299 bits (129), Expect = 1.315e-6 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGE---------VGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
GA+G+ GS G+ G G +G G G+ VG +G G G GP+G G AG G+ G+ G TGP G G GD G GP G +G G +G +GP G G G
Sbjct: 425 GAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQG 533 HSP 10 Score: 54.299 bits (129), Expect = 1.544e-6 Identity = 42/101 (41.58%), Postives = 52/101 (51.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG G G+ G G HG G+ G RGE G G +G G +G G G G G G +G G RG G G +GS G PG G PG+ G++G G+ G G
Sbjct: 337 KGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPG 437 HSP 11 Score: 53.9138 bits (128), Expect = 1.782e-6 Identity = 47/106 (44.34%), Postives = 57/106 (53.77%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRG---KDGNKGDEGSVGPPGYAGNPGIK---GSRGPVGNQGRDG 2131
G G RGS G+ G+ G G G G G +G G G+ G RG G+ G++GD G QG G G KDG +G G +G PG AG PG K G+ GPVG G G
Sbjct: 581 GPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARG 686 HSP 12 Score: 53.5286 bits (127), Expect = 2.219e-6 Identity = 45/102 (44.12%), Postives = 54/102 (52.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G G SG +G GPSG G RGE G G G G+ GP+G G G G+ G+ G+ G G G +GD G G G G G G+RG G+ G DG K
Sbjct: 497 GAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAK 598 HSP 13 Score: 53.5286 bits (127), Expect = 2.604e-6 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G+ GAKG+ G G+ G G G G GE G +G RG G G +G G +G G RG G+ G G+ G PG G PG+ G +G G GR GE
Sbjct: 326 GAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGE 420
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Medaka
Match: col11a1a (collagen type XI alpha 1 chain [Source:NCBI gene;Acc:105356662]) HSP 1 Score: 112.079 bits (279), Expect = 3.890e-24 Identity = 144/496 (29.03%), Postives = 212/496 (42.74%), Query Frame = 2
Query: 3605 GLPGKAGLQGPAGGSGT---QGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTG------------------PQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDAL---FDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGD-SELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYM--DKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
G G+AG +GPAG +G QG AG+ G G GI G +G++G G G GP GP G PG G G G+ G KG GL G +G PG++GE KG +G PG GA G KG+ G G G +G G GPKG+TGL+GP GP G GE + IR+P + S A + +D + + F ++ + I+R+++P G +++ ARTC D++L + D +Y+IDPN+G DS +V C F+ +TCI + G+ P + +W + + G D ++ QM FL+ + + Q + C QSV + D S S E ++ LG N+ M D Y +T DGC R + +L T + +PI+D ND+ + G +V +CF
Sbjct: 1347 GAKGEAGAEGPAGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGE---KGDRGLPGPQGAPGGKGDSGMSGTAGPLGPPGPPGLPGPQGPKGAKGSSGPAGPKGDTGLIGPPGPPGPPGE-----------------------------------VIEPLPIRSPKKSKRSADMPSDTAGTIMDYGEGMEDIFGSLNSLKQDIERMKYPMG-TQNNPARTCKDLQLCHPEFPD-EYWIDPNQGCSGDSFKVYCNFTAGGETCIYPDNKSSGVRISSWPKEVPGSWFSEFK-HGKTLNYVDADGNSINMVQMTFLKLLTASARQNFTYHCHQSVAWHDASSDSHERALRF-------------------LGANDEEMSFDNNPY----------ITAIADGCETRNGYGKTVLELNTPKIDQVPIVDVMFNDFGDPN-QKFGFDVGPVCF 1771 HSP 2 Score: 107.842 bits (268), Expect = 7.331e-23 Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 2
Query: 245 SYRDGVVDLLTAVQISDKNIGTTAEEPFCGNSRRK----AFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRD----PSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYV----LQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGPV 892
+ R VD+L + + G T FC N R A+R + A + +F G FP++FSIL T + ++ + SI N+ L V GR Y D P+ + L +L DG+WHR+A SV+K +V++++DC+ + L R SD +S + V + D GD + LL+V A+ C+ Y+P+C+ D + Q P+
Sbjct: 34 AVRAEPVDVLKVLAFQNYPEGVTRTSGFCENRRASRPDSAYRVAKNIQISAPTTQVFPGVFPEDFSILTTLRPKSGLQSFLLSIYNEQGVQQLGVEVGRSPVFLYEDQNGKPAPEDY-PLFRALNLADGRWHRVAISVEKKTVTIIVDCKKTITKPLPR-SDHASVSTDGITVFGTRILDEEGD------IQQLLIVDDPKAAYDYCEHYSPECDTPQRDSLQAQEPL 253 HSP 3 Score: 64.6994 bits (156), Expect = 1.002e-9 Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGD-HGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNK-GDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
KGA G+RG G+KG+ G G G +G++G+KG +GE G+ GPRG +G G KG G GE+GP G G K G G G PGY G G KGS G G G +GEK
Sbjct: 764 KGADGVRGLKGSKGEKQGEDGFPGFKGDMGIKGDRGEIGLLGPRGEDGPEGPKGRAGPTGESGPLGPAGEKQGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK 868 HSP 4 Score: 63.1586 bits (152), Expect = 3.456e-9 Identity = 134/367 (36.51%), Postives = 159/367 (43.32%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKF---------------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGP-QGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASG-------AEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGT 3520
G PG++G G G PG+ G++G +G+ GP G +G PG G RG G+ GP G G G RG G GP G KG G G GPPG G G P G GPQG G G+ G G G G GP GEKG GPLG G G G G+KG++G GL GS+G QG G PG GD G+ KG +G+IGL+GP G G G G G TG SG +G+ GV G G G GP+G G G G G KG +G +G QG G+ G GP G +G GP G PGP GT
Sbjct: 588 GEPGSKGDRGFDGLPGLPGEKGH---RGEPGPMGPTGAPGEDGQRGEDGEIGPRGLAGETGPRGLLGPRGPPGPPGGPGVAGVDGPPGPKGNMGPQGEPGPPGQQGIPGTQQGLPGPQGPIGPPGEKLQGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGAQGPLGPQGPIGYPGPRGVKGADGVRGLKGSKGEKQGEDGFPGFKGDMGI---------------------------------KGDRGEIGLLGPRGEDGPEGPKGRAGPTGESGPLGPAGEKQGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGI------------AGKQGPRGQRGPTGPRGARGARGPTGKPGPKGT 906 HSP 5 Score: 60.4622 bits (145), Expect = 1.801e-8 Identity = 152/429 (35.43%), Postives = 177/429 (41.26%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKP---------GIDGKEGSIGPKGDLGPRGQSGNPGP-QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIG 3742
RGPPG G +G G G G G GP+G GP GQ+G G QG GA G G GE GSKGDRG G G G+KG R G G +GP G GE G G G+ G +G GE G +G G G G G GV+G G PG G G +GE G G QG G P P + ++G G G G PG G G PGK G G +G G G +G G GPRG +G D +G+ G G G+ G +G GE+G+ GP G G GP G GP G SGP G G G PGLPG G QGP G +G G G G++G GIAG G RG GP G
Sbjct: 523 RGPPGPMGLTGRSGPVGPPGPAGLKGEGGDPGPQGPRGIQGPPGQAGKSGKRQGRSGADGARGMPGEPGSKGDRGFDGLPGLPGEKGHR---------------------------------------------------GEPGPMGPTGAPGEDGQRGEDGEIGPRGLAGETGPRGLLGPRGPPGPPGGPGVAGVDGPPGPKGNMGPQGEPGPPGQQGIPGTQQGLPGPQGPIGPPGEKLQGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGAQGPLGPQGPIGYPGPRGVKGAD--GVRGLKGSKGEKQGEDGFPGFKGDMGIKGDRGEIGLLGPRGEDGPEGPKGRAGPTGESGPLGPAGEKQGKLGV-----------PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKQGPRGQRGPTG 887 HSP 6 Score: 60.4622 bits (145), Expect = 2.131e-8 Identity = 150/435 (34.48%), Postives = 184/435 (42.30%), Query Frame = 2
Query: 2855 KGVRGLLGRKGSVGPIGP------DGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQ---------------------PGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGI------------QGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXS-PGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
+G G +G G GP+GP GE GD GP G G++G G+ G G + G G+ G +G+ GEPGS GD G + G PG GEKG +G+ G +GPTGAPG G+ G G+ G G G+ GV G G G +GP+GE G G G G++ G P GPQG G G+ +GPPG KG GP+G GP+G GP G GA G G G G+ PG G G++G G G G GE G GP G AG G+ GP GP G +G G G PG G + KG G PG GA G KG G G GP+G+RG GP+G G GP G G G
Sbjct: 523 RGPPGPMGLTGRSGPVGPPGPAGLKGEGGDPGPQGPRGIQGPPGQAGKSGK--RQGRSGADGARGMPGEPGSKGDRGFD------------------------GLPGLPGEKGHRGEPGPMGPTGAPGEDGQRGEDGEIGPRGLAGETGPRGLLGPRGPPGPPGGPGVAGVDGPPGPKGNMGPQGEPGPPGQQGIPGTQQGLPGPQGPIGPPGEKLQGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGAQGPLGPQGPIGYPGPRGVKGADGVRGLKGSKGEKQGEDGFPGFKGDMGIKGDRGEIGLLGPRGEDGPEGPKGRAGPTGESGPLGPAG--------------------------EKQGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKQGPRGQRGPTGPRGARGARGPTGKPGPKG 905 HSP 7 Score: 52.373 bits (124), Expect = 5.622e-6 Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGD-EGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
++G G G G G G G G +G GE G QGP GP+G G G G++G G RG G+KG+ +G G PG+ G+ GIKG RG +G G GE
Sbjct: 712 LQGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGAQGPLGPQGPIGYPGPRGVKGADGVRGLKGSKGEKQGEDGFPGFKGDMGIKGDRGEIGLLGPRGE 809 HSP 8 Score: 51.9878 bits (123), Expect = 7.057e-6 Identity = 76/213 (35.68%), Postives = 92/213 (43.19%), Query Frame = 2
Query: 3425 GPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXX---XXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY----LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
GPQG G+ G +GPPGR G G GLPGP GT P S Q + S P + ++GP G G G +G G GP G+ G G GP GP RG+ G G+ G+ G+R G +G PG G+ G +G G PGL G +G RG PGP G TG G G GEDGE
Sbjct: 453 GPQGTPGDPGDRGPPGRAGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARP-QLAMRGPPGPMGLTGRSGPVGPPGPAGLKGEGGDPGPQGP------------------------------RGIQGPPGQAGKSGKRQGRSGADGARGMPGEPGSKGDRGFDGLPGLPGEKGHRGEPGPMGPTGAPGEDGQRGEDGE 634
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Medaka
Match: col1 (collagen type I alpha 1 [Source:NCBI gene;Acc:100144368]) HSP 1 Score: 111.309 bits (277), Expect = 5.652e-24 Identity = 218/555 (39.28%), Postives = 256/555 (46.13%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPG---PQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGD---------------------RGPPGIAGNMGQRGPNGPIGI---------VXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQ---KGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
RG PG+ GP+G G PG G G +GPKG G G++G PG +G+ G+ G GP G+ G G G+ G GP G G RG PG G PGP G G G + G RG++G GP G G+ GD GP G +G G GE G +G G G G GPQG GEPG PG+ G+ G+ G G G +GD G G GAPG +G AG G G++G +G G G G G GP G QG+ G RG G G G+ G QG +G G G G +G GPIGLPGP G G G+ GA GP G +G G G G G PG AG GP G G G GE G+ +GP G G G RGP GP G VGP GP G PGP GP G G GPKG+RG G G PG+ G G KGSPG GA GS G PGP G+ G +G G PG +GE G G GP GE G+
Sbjct: 476 RGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAG------------------------KPGERGVMG---PTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGL------------------------TGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGM------------PGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAGKEGPKGNRGETGPAGRPGEVGAAGPPGPSGEKGSPGADGAPGSAGLPGPQGIAGQRGIVGLPGQRGERGFPGLPGPAGEVGK 967 HSP 2 Score: 102.064 bits (253), Expect = 4.262e-21 Identity = 72/278 (25.90%), Postives = 116/278 (41.73%), Query Frame = 2
Query: 4196 RYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQ---QGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVD-HTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSK--FKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
R R+ A D + + + ++ +I++IR P G K+ A RTC D+K+ G+Y+IDP++G +D+I+V C E +TC+S ++ Q Y K + + W +G S+ D + Q+ FLR ++++ Q + + C SV Y D+ K A +L + I R F ++ DGC T G+ K +T+ S LPIID D GL V +CF
Sbjct: 1196 RMFRADDANVLRDRDLEVDSTLKSLSQQIEQIRSPDGTRKNPA-RTCRDLKMCHPDWKSGEYWIDPDQGCTQDAIKVYCNM-ETGETCVSPTQREVAQKNWYISKNIKEKKHVWFGETMNDGFQFEYGSEGSLPEDVNIQLTFLRLMSTEASQNLTYHCKNSVAYMDAAA---GNLKKALLLQGSNEIEIRAEGNSR---------------------FTYSVLEDGCTSHT-GTWGKTVIDYKTSKTSRLPIIDIAPMDIGAP-DQEFGLEVGPVCF 1445 HSP 3 Score: 100.138 bits (248), Expect = 1.488e-20 Identity = 166/406 (40.89%), Postives = 200/406 (49.26%), Query Frame = 2
Query: 2852 EKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIG------LPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGP---IGPVGEDGE 4042
E G +G G G+ GP G GE+G G G+ G G RG G +G+ G G GS GP G G PG G G+ VG +G G+PG GE G+ G G+ G G+PG G+ GP G G G G PG G +G G++G G +G G G G +G+ G G G G G+SGPQG G GP G +GE GP G LPGP G G GK G G PG +G G G G G PG+ G GP G +G +G G G+ G G AG G G GP G+ +G PG G G G G +G +G G G PG+ G R L G G PG GA G KGEPG G GP G RG PG +GE+G GP GP G DG+
Sbjct: 427 EPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGL------------------VGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGP---SGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGL------QGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQ 805 HSP 4 Score: 89.7373 bits (221), Expect = 2.234e-17 Identity = 177/508 (34.84%), Postives = 209/508 (41.14%), Query Frame = 2
Query: 2507 GPSGLP---GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGE---PGPPGLTGPQGKRGNPGPKGETGLMG 4012
G G P G+PG G+ G+ G +G G G+ G G +G GA G G GE G+ G RG G GP G KG G G G G G+ G G GE G+ G G GS G GPDG+ G G G+ G G G VG + G+ G+MG GP+G +G+ G PG+ GV G G G G G +GP G G G G RGE+G G G G G G IGE G PG+ G G G PG+ G +GD G G RG G GP G G G G G KG+ G G PG G PGL G G +G AG G +G+ G++G +G G G G RG GPIG L G G PG KGE G G G GA G +GE PGP G GP G G PG KGE+G G
Sbjct: 417 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKG---------------------APGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGAR---GQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGP---------------------------VGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGP---------------------------PGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIG------------------------------LPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENG 816 HSP 5 Score: 88.1965 bits (217), Expect = 7.410e-17 Identity = 210/507 (41.42%), Postives = 251/507 (49.51%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLG------PRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGA---PGRIGEAGPPGKTGASG---AEGQPGVKGTKGDTGI---------------------------------LGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER 3874
GP G GP+G PG+ G G GS+G +G G P+G +G+ G G RG G +GP G G GD G GP GP+G GERG+ G G PG G GP G G PG G +G+ G+ G G G +G RG G +G+ GP+GP G +G G G G KG G G G++G GL G G +G +G PG GD G G KG G G G G G G+PG G G+KG G G +GP GA PG GE+GPPG G +G ++GQPG KG G+ G GP G G G G +G G G G PG G G GP+G GE G P GR GE+G G PGP G G G DGAPG S GLPG G+ G G G G+ GERG G PG AG +G++GP GP G GP GP G PG GP G G G G+ G G+ G PG KG+R
Sbjct: 531 GPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAGKEGPKGNRGETG---PAGRPGEVGAAGPPGPSGEKGSPGADGAPG---------------SAGLPGPQGIAGQRGIVGLPGQRGERGFPGLPGPAGEVGKQGPVGPGGERGPPGPSGPPGLAGPPGEPGREGTPGNEGSAGRDGAPGPKGDR 1019 HSP 6 Score: 80.4925 bits (197), Expect = 1.590e-14 Identity = 173/493 (35.09%), Postives = 202/493 (40.97%), Query Frame = 2
Query: 2597 GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPI------GLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEP---GPPGLTGP---QGKRGNPGPKGETGLMGPIGPVGEDG 4039
G PGP+G G G G GE G+KG+ G G QGP G G E+G RG G G+ G G GE+G G G G+ G G KG+ G+ G G GP+G +GEPG G+ G+ PG G G G G G GP GAPG+ G GPPG GA G G G G KG G G GE+G+ G G G G G+SGPQG G GP G +GE GP GLPGP G G PGK G QG G +G G G RGDRG P G+RG GP+G G G G G G G G PG G++G G G PG++G L G++G G GA G+ G P G GLTGP G G PG KGE G GP+GP G G
Sbjct: 408 GAPGPKGNNGEVGAPGAKGEPGAKGEAGAPGAQGPPGAHG---------------------------------------------EEGKRGARGEPGAPGARGAPGERGAP---GGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGL------------------------PGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGV------------MGPTGPAGAPGKDGDSGPQGPSGP---SGPAGERGEQGPAGAPGFQGLPGPQGAI---------------------------GEPGKPGEQGLPGDAGAPGLTGARGDRGFP------GERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARG 780 HSP 7 Score: 63.5438 bits (153), Expect = 2.274e-9 Identity = 88/266 (33.08%), Postives = 108/266 (40.60%), Query Frame = 2
Query: 3245 GKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G+ GA GA+G+PG KG G G GP G G +G G +G G G +G PG +G G G PG G +G G +PG G GL GP G +G G GE G G G+ G+ G GP+G G G + G DG+ G PG G R G+ G PG GA G G+PG G+ GP G G PG G++G GP GP G GE
Sbjct: 417 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEG------------------------KRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKG---------------------APGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGPAG------------------------APGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGE 613 HSP 8 Score: 58.9214 bits (141), Expect = 4.979e-8 Identity = 201/571 (35.20%), Postives = 233/571 (40.81%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIK------------------GSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRG---------------------PPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKG---------SPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG---------------ETGLM 4009
RG PG GP+G G PG G +G+ G G G G G PG QG+ G RG +G G G +GD+G G G G G RG G G PGPAG G G G+ G G G RG G +G GP GP G G G G+ G KG GE G K G G TG G+RGP G G G PG AG GP GP G G PG G G++G KG+ G GP G PG +G AGPPG SG +G PG G G G+ GPQG+ G+ GI G PG++GE G GLPGP G G G G G G G +G G G PG PG+ G G G +G G G +GDRG P G +G+ G+ GP GP G GP G GP G GL G GE G+ GER +KG +G G G G G GP G GP G G PG G +G M
Sbjct: 668 RGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVG---------------PAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAG------------RVGPPGPAGNPGPPGPTGQAGKEGPKGNRGETGPAGRPGEVGAAGPPGP---SGEKGSPGADGAPGSAGL------------------------------------PGPQGIAGQRGIVGLPGQRGERGFPGLPGPAGEVGKQGPVGPGGERGPPGPSGPPGLAGPPGEPGREGTPGNEGSAGRDGAPGPKGDRGESGPSGAPGAPGPPGAPGPVGPAGKSGDRGETGPAGPAGA---------------SGPAGPRGPAGPPGLRGDKGETGEAGERGMKGHRGFTGMQGPPGPSGPPGEQGPAGSAGPAGPRGPAGSAGVPGKDGMSGLPGPTGPPGPRGRSGEM 1157 HSP 9 Score: 58.9214 bits (141), Expect = 6.148e-8 Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 2
Query: 1841 GIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G GS GA+G G G G +G G G GE G+ GP GP G G GD G QG +GP G G +G++G G PG+ G PG +G+ +G G+ GE+
Sbjct: 549 GPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGA---IGEPGKPGEQ 644 HSP 10 Score: 54.6842 bits (130), Expect = 1.063e-6 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
+GA G+ G G +GD G G G G+ G +G+ G G+ GP G G G G G G G RG G +G+ G GP G+AG PG G G G G +G K
Sbjct: 716 RGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGESGENGAK 818 HSP 11 Score: 53.5286 bits (127), Expect = 2.176e-6 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGE---------VGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
GA+G+ GS G+ G G +G G G+ VG +G G G GP+G G AG G+ G+ G TGP G G GD G GP G +G G +G +GP G G G
Sbjct: 519 GAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQG 627 HSP 12 Score: 53.5286 bits (127), Expect = 2.408e-6 Identity = 42/101 (41.58%), Postives = 52/101 (51.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
KG G G+ G G HG G+ G RGE G G +G G +G G G G G G +G G RG G G +GS G PG G PG+ G++G G+ G G
Sbjct: 431 KGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPG 531 HSP 13 Score: 53.1434 bits (126), Expect = 2.948e-6 Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDGEK 2137
+G+ G G+ GAKGD G G G +G G++G+ GE G G G+ G +GD G +G G GKDG +G G +G PG AG PG KG GP G +G GE+
Sbjct: 680 RGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGL---PGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGER 785 HSP 14 Score: 52.7582 bits (125), Expect = 3.764e-6 Identity = 45/102 (44.12%), Postives = 54/102 (52.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GA G G SG +G GPSG G RGE G G G G+ GP+G G G G+ G+ G+ G G G +GD G G G G G G+RG G+ G DG K
Sbjct: 591 GAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAK 692 HSP 15 Score: 52.7582 bits (125), Expect = 3.796e-6 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G+ GAKG+ G G+ G G G G GE G +G RG G G +G G +G G RG G+ G G+ G PG G PG+ G +G G GR GE
Sbjct: 420 GAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGE 514
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Medaka
Match: col5a1 (collagen alpha-1(V) chain [Source:NCBI gene;Acc:101155530]) HSP 1 Score: 107.842 bits (268), Expect = 7.022e-23 Identity = 61/264 (23.11%), Postives = 114/264 (43.18%), Query Frame = 2
Query: 4220 QSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
+ + D + +F ++ + +I++++ P G + + ARTC D++L + TD +Y+IDPN+G +DS +V C F+ ++CI K+ G K P W + + +S D + QM FLR ++ + Q + + C QSV + D + ++ + A + G D+ + D P + DGC + + ++ T + +P +D ND+ G V +CF
Sbjct: 1266 KDYDDGMEEIFGSLNSLKQEIEQMKHPLG-TQSNPARTCKDLQLCHPEFTD-EYWIDPNQGCSRDSFKVYCNFTAGGESCIFPDKKSEGSKMAKWPKDSPGTWYSRYKRGSMLSYV-DAEGNPIGVVQMTFLRLLSAAARQNMTYNCYQSVAWHDQQ---QDSYDKAIRFL-------------------GSNDEEMSYDN--NPYIRAVV--DGCALKKGYEKTVLEINTPKVEQVPFVDIMFNDFGGS-TQKFGFEVGPVCF 1499 HSP 2 Score: 68.5514 bits (166), Expect = 6.528e-11 Identity = 159/393 (40.46%), Postives = 190/393 (48.35%), Query Frame = 2
Query: 2870 LLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLP------GPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSK---GEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
L G G GP GP G G GP GK G +G G G +G G+TG G RG G++G PG G G G G PG GE G +GD G IGP G P GE GP G G G +G PG G G G GP+G G +G+PG G GN G QG+ G G GPPG KG G GLP GP G G G G G G G G G G G+ G G++G G G +GE G G +G GI G+ G+ GP GP G GP+GP+G+ G G GPIG G KG G+ G G PG++G + +G +G PG G G++ G+PGP G GP G RG GP+G TG GP G
Sbjct: 239 LKGESGEGGPQGPRGPMGSAGPPGKPGRRGRSGADGARGMPGQTGPKGDRGFDGLAGLPGEKGHRG---------------------EAGPQGPPGSPGEDGERGDDGEIGPRGLP---GEPGPRGLLGPKGPQGPPGPPGVTGMDGQPGPKGN---------------IGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPTGEKGHMGPPGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPKGRSGLPGDPGPIGPGGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTGGKPGPRGQRGPTGPRGERGPRGPTGKAGPKG 592 HSP 3 Score: 55.0694 bits (131), Expect = 9.506e-7 Identity = 78/219 (35.62%), Postives = 99/219 (45.21%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQS------------------GNPGPQGIRGARGQSGPTGE---------LGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDA 3064
GPPG +GP+G PG PG+ G +G G G GP G+ G G G+RG +G G GE +G KGDRG+ GP GP G+ G G G G G G GP G G+ GV GL G G GP G G +G G G+ G +GT G+ G +G G TG G RGP+G +G+ G G++
Sbjct: 397 GPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPTGEKGHMGPPGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPE---------------------GPKGRSGLPGDPGPIGPGGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTGGKPGPRGQRGPTGPRGERGPRGPTGKAGPKGNS 594
BLAST of Collagen type IV alpha 2 chain vs. Planmine SMEST
Match: SMESG000077782.1 (SMESG000077782.1) HSP 1 Score: 1183.32 bits (3060), Expect = 0.000e+0 Identity = 840/843 (99.64%), Postives = 842/843 (99.88%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS 5014
RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERGDPGSQGPPGPAGPNGPIGVAGSPGDKGGKGVVGNPGPQGPIGEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQGIPGQPGPRGEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGP+GPIGSKGLKGGRGKPGRQGSTGNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTSGPSGKDGAPGPPGGSGQAGDDGPVGSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVGPDGPRGQPGPIGPMGPIGNPGPKGSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGESGAAGPLGPYGPPGPPGDRGLPGDSGDRGGQGRPGPPGQVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVF+EEVKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRA DLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCFS
Sbjct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core: 686.411 bits (1770), Expect = 0.000e+0 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 2
Query: 146 MLNITSLKRGVXXXXXXXXXXXXXXXXXXTQALSYRDGVVDLLTAVQISDKNIGTTAEEPFCGNSRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGPVKXXXXXXXXXXXXXXXXXXXXXXXXXNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIXXXXXXXXXXXXXXXXXXXTDGERGSNGLTGPKGRSGDIGMQGLPGNKXXXXXXXXXXXXXXXXXXXXXXASGRPGDV 1462
MLNITSLKRGVLISRISLVSILLILYLSSTQALSYRDGVVDLLTAVQISDKNIGTTAEEPFCGNSRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGPVKKEETGGQQGPPGPKGPKGPKGQEGKNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIGPRGLRGMRGIPGPPGRSGTDGERGSNGLTGPKGRSGDIGMQGLPGNKGEKGYRGGRGSKGSLGRRGELGASGRPGDV
Sbjct: 1 MLNITSLKRGVLISRISLVSILLILYLSSTQALSYRDGVVDLLTAVQISDKNIGTTAEEPFCGNSRRKAFRYESGNSLMAKSDVLFQGKFPKEFSILITAKSEALDSQDVFSIRNKNNNIILAVTYGRQITLRYRDPSSTSFMNLPFEFDLTDGQWHRIAFSVDKSSVSLLIDCQFIGSMKLNRTSDPLDISGGFLYVLQDHNGDASFTGILDSLLLVGGASEAFKQCQIYNPDCNNDFNDVMMNQGPVKKEETGGQQGPPGPKGPKGPKGQEGKNGRDGLPGTPGVPGAPGHIFVLPIPDSEENSNRRVAQFRTSIKRTASLLKGNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIGPRGLRGMRGIPGPPGRSGTDGERGSNGLTGPKGRSGDIGMQGLPGNKGEKGYRGGRGSKGSLGRRGELGASGRPGDV 439 HSP 3 Score: 204.142 bits (518), Expect = 2.378e-52 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 2
Query: 1709 VQGSAGLPGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
VQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK
Sbjct: 522 VQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 664 HSP 4 Score: 98.2117 bits (243), Expect = 4.557e-20 Identity = 217/604 (35.93%), Postives = 264/604 (43.71%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEG---------------SIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---GVKGDIGLIGPTGAPG---------------RIGEAGPPGK---TGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR---KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSP------------------------GLPGKAGLQGPAGGSGTQGEAGE------RGDRGPPGIAGN------MGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNP------------GPKGETGLMGPIGPVGEDG 4039
GP G +G +GLPG PG G G + GP G G RG G+ G +G G GQ G GE+G KG +G++G QGP G +G GV+G +G +G GP G DG KGD G +G G G G G +G G G G +G G++G PG G G G G +G G G G G QG G G G G +G IG IG +G PG GE G PG+ G G+ GQPG +G+ G+ G G RG GL G G G +G G +G G +G +GN GPQG+ G G GP G KG+ G G GP G G G G+ GPPG +G G G GSP GL G+ G GP G G +G+ G +G RG GI G+ MG RGP G G G G G G G G G+ GP G G+ G G+PG +GE+ +KG G G GA G GE GPPG TG G G P GP+GE GL GPIGP+G G
Sbjct: 518 GPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---------------------------------------------IAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEKGDPGIAGTPGGNGPVGPIGSPGPRGGPGPSGTLGSKGEQGPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERGDPGSQGPPGPAGPNGPIGVAGSPGDKGGKGVVGNPGPQGPIGEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQGIPGQPGPRGEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGPIGPIGSKG 1076 HSP 5 Score: 97.8265 bits (242), Expect = 5.723e-20 Identity = 191/560 (34.11%), Postives = 248/560 (44.29%), Query Frame = 2
Query: 2543 GKEGSIGPKGDLGPRGQS------------------GNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------EKGVKGDIGL---IGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK---------GIKGSPGTIGAVGSKGEPGPPGLTGPQGKR------------------GNPGPKGETGLMGPIGPVGEDGE 4042
G G+IG G GP G S G PG G G +G G GE GS G+RG G +GP+G G+ G+ G++GS+GP KGD+GP G++G G +G G +G G TG +GS+G +G G G GD G G+ G QG G GP GP+GV G PG G +G EKGV+G +G +GP G G G+ GP GKTG G G+ G+KG++G TG++G RG QG+ G G G G+ G +G+ G+QGS G +GP GV+G G GP G KG G IGL GP G +PG G+AG G G SG +G+ G +G +G GI G G++G +GPIG + GS+GL G G+PG++G GI+G PG G +G G PGP G +GP GK G+PG G+ GL GP G G GE
Sbjct: 719 GPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGK------------------------------------------------PGIDGKEGSIGP------KGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERGDPGSQGPPGPAGPNGPIGVAGSPGDKGGKGVVGNPGPQGPIGEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQGIPGQPGPRGEKGVKGDIGLIGPTG---------------------------APGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGPIGPI------------------------GSKGLKGGRGKPGRQGSTGNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTSGPSGKDGAPGPPGGSGQAGDDGPVGSPGLPGKAGLQGPAGGSGTQGE 1173 HSP 6 Score: 92.0485 bits (227), Expect = 3.665e-18 Identity = 214/545 (39.27%), Postives = 262/545 (48.07%), Query Frame = 2
Query: 2498 GTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTG---------------DKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRG---PQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSG------------TQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
G RGP G+ G PG G G G KGD G G +G GP+G+RG RG GP G G+ G+RG G GP G +KG RG GS+G G G G G G G G G G GP+GP G +G+RGL G G GP G GE G++G G G G +G +G +G G +G G RG PQGV G G PG+ G G+ GE+G G GP G +G G G KG G+ G +GA G + GP G+ G G+ G+KG KG+ GI GPRG +G+ GV+G++GIQG G +G+ G G G VG G +G G G G G G DG G PG+ G G GP G G T G GE+G GP G+ G +G GP G IG +G GP G G GP G G G + GEPG GE G++GSPG G GS GE GPPG GP G G PG G+ G +GP G +G G+
Sbjct: 326 GNRGPQGMTGLPGFQGPIGYRGVKGDPGSNGDAGFIGPRGLRGMRGIPGPPGRSGTDGERGSNGLTGPKGRSGDIGMQGLPGNKGEKGYRGGRGSKGSLGRRGELGASGRPGDVGPPGENGPPGFQGPRGPPGPQGIRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTG---------PPGYKGARGIRGSSGAKG---DHGPSGQVGT---RGEVGMKGVKGEYGIQGPRGPEGI------------------------------AGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEKGDPGIAGTPGGNGPVGPIGSPGPRGGPGPSGTLGSKGEQGPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERG---------ETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQ 816 HSP 7 Score: 87.8113 bits (216), Expect = 7.448e-17 Identity = 197/529 (37.24%), Postives = 245/529 (46.31%), Query Frame = 2
Query: 2489 GPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSR---GPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGT---------IGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDG 4039
GP G RG G+PG PG G +G G G GP+G+SG+ G QG+ G +G+ G G GSKG G+ G G +G G+ G G G G GP+GP G +G+RGL G G GP G GE G++G G G G +G +G +G G +G G R GPQGV G G PG+ G +QG G G G G PG+ G G G KG G+ G +GA G+ GP G+ G G+ G+KG KG+ GI GPRG +G+ GV+G++GIQG G +G+ G G G VG PG G G++G G G QG GE+GD PGIAG G NGP+G +G GPRG PGP G +G G GP G G+ G VG G +G G+ G PGT G G GEPG PG GP G +G+PG GE G MG GP G G
Sbjct: 362 GPRGLRGMRGIPGPPGRSGTDGERGSNGLTGPKGRSGDIGMQGLPGNKGEKGYRGGRGSKGSLGRRGELGASGRPGD------------------------VGPPGENGPPGFQGPRGPPGPQGIRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPG---------QQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAK---GDHGPSGQV---GTRGEVGMKGVKGEYGIQGPRGPEGI------------------------------AGVKGDIGIQGETGPRGKDGNKGDEGSVG---------------------------PPGYAGNPGIKGSRGPVGNQGRDGEKGD---PGIAGTPGG---NGPVGPIGSPGPRGGPGPSGTLGSKGEQGPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRG 788 HSP 8 Score: 87.8113 bits (216), Expect = 7.901e-17 Identity = 223/564 (39.54%), Postives = 266/564 (47.16%), Query Frame = 2
Query: 2504 RGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTG---------------------------------------ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXX---XXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRG---PPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKG---ETGLMGPIGPVGEDGE 4042
RG SG+ G PG G+ G G G GP G +G GP G +G RG SGP+G G G +G G G G+ G++GD G +G GP+GP G E G G G KG+ G G G KGD GP G+ G TRGEVG+KG +G+ G+ G RGP+G++G GD G+ GE G +G + G KGD G +GP G PG G GP G G G +G PG+ GT G G +GPRG G G GP G+ G G G PG +G TG G G G +G+QG PG+ GE G +G GP GT GPSG G PG G G GD GP G G PG G++G G SG GE G +GDRG P G G+ G+RG G G GP GP G G G G G G G+ G G +GE KG R L G KGS G IG G KG+ GP G TG +G RG G KG +TGLMG GP G GE
Sbjct: 463 RGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPG---------------------------EMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVG---TRGEVGMKGVKGEYGIQGPRGPEGIAG---VKGDIGIQGETGPRG------------------------KDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEKGDPGIAGTPGGNGPVGPIGSPGPRGGPGPSGTLGSKGEQGPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERGDPGSQGPPGPAGPNGPIGVAGSPGDKGGKGVVGNPGPQGPIGE---KGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGE 966 HSP 9 Score: 87.4261 bits (215), Expect = 8.966e-17 Identity = 228/581 (39.24%), Postives = 269/581 (46.30%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKF------GPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPD---GEKGDV------GPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK---------------GVKGDIGLIGPTGAPG---------------RIGEAGPPGK---TGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR---KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKA------GLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGP------QGKRGNPGPKGETGLMGPIGPVGEDG 4039
RG G GP G G+ G G+ GS GP G P G G GPQG RG G SGP G G +G +G G QG G+KG+ G G G G GP G G G G G KG G G G GE G++G+ G G GP GP+ G KGD+ GP GK G KG G VG G G G+ GSRGP G G G GD G+ G G G G G GP G G G G +GE+ G +G IG IG +G PG GE G PG+ G G+ GQPG +G+ G+ G G RG GL G G G +G G +G G +G +GN GPQG+ G G GP G KG+ G G GP G G G G+ GPPG +G G G GSPG G G QGP G G +G G +G GP G G G GP G G+ G G G +G +GK G G +G + + G GSPG G G KGE G G GP QG G PGP+GE G+ G IG +G G
Sbjct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core: 67.0106 bits (162), Expect = 1.419e-10 Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVG---TRGEVGMKGVKGEYGIQGPRGPEGIA---GVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSR---------GPVGNQGRDGE 2134
KG+ G G G KGD GP G+ G TRGEVG+KG +G+ G+ G RGP+G++ G GD G+ GE G +GK G++G G VG G G PG +G + GP G GR GE
Sbjct: 913 KGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQGIPGQPGPRGEKGVKGDIGLIGPTGAPGRIGE 1029 HSP 11 Score: 63.5438 bits (153), Expect = 1.663e-9 Identity = 122/357 (34.17%), Postives = 150/357 (42.02%), Query Frame = 2
Query: 3005 LMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLK---------------GIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
L G+RGPQG++G PG G G G +G+ G GD G IGP G G G GPPG++G G G G+ G KG +G +G +G G N G +G G G +G GR+GELG G PG VG G +G G GP G G G G G G PG G G G G+ G G G +GP G G G GP+GP GI G G +GS GL G G+ G GE+ G KG+ G G+ G+KG+ GP G G +G+ G G KGE G+ GP GP G
Sbjct: 324 LKGNRGPQGMTGLPGFQGPIGYR---------------------------GVKGDPGSNGDAGFIGPRGLRGMRGIPGPPGRSGTDGERGSNGLTGPKGRSGDIGMQGLPG---------------------------NKGEKGYRGGRGSKGSLGRRGELGASGRPGDVGPPGENGPPGFQGPRGPPGPQGIRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGI------------------PGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG 608 HSP 12 Score: 63.5438 bits (153), Expect = 1.779e-9 Identity = 202/540 (37.41%), Postives = 240/540 (44.44%), Query Frame = 2
Query: 2576 LGP---RGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGP---TGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTG------------------ILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRK------------GELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGER---------------YLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
GP RG SG GP G +G G+ G G G G G GP GP G +G G G +G PGP G G G+ G+PG +G G G+ GP GP GE G G G KG+ G G G KGD GP G+ GTRGEVG+KG +G+ G+ G RGP+G++ G GD G+ G+ GPRG+ G KGD G +GP G PG G GP G G G +G PG+ GT G G LG +GEQ G G G G G GP+G G +G+ GPPG GE G G PG G G G G PG G G+ G G G GLPGK G+ G G G +G+ G RG G PG G G RG +GP G + G KG RG G G G KGER G+ GSPG G G G PGP GP G++G G G G +GPIGP GE G+
Sbjct: 457 PGPQGIRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQV---GTRGEVGMKGVKGEYGIQGPRGPEGIA---GVKGDIGIQ------------------------GETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEKGDPGIAGTPGGNGPVGPIGSPGPRGGPGPSGTLGSKGEQ---------------GPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGEL---------------------GSKGDRGKFGPQGPTGDKGERGDPGSQGPPGPAGPNGPIGVAGSPGDKGGKGVVGNPGP---QGPIGEKGVRGLLGRKGSVGPIGPDGEKGD 927 HSP 13 Score: 60.077 bits (144), Expect = 1.931e-8 Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG+ G G G++G G SG+ G+ G+ G+ G KGE G QG +GP G GV+G I G+ GPRG+ G KGD G +GP G G G G G G G +G+
Sbjct: 946 KGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQG---IPGQPGPRGEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQ 1044 HSP 14 Score: 60.077 bits (144), Expect = 2.066e-8 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQG---PRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSR------GPVGNQGRDG 2131
+G +G+ G G+ GD G +G+ G +G+ G +G G G+QG GP G GVKGDIG+ G TG G+ G G G G G G PG+KG++ GP G QG DG
Sbjct: 958 RGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQGIPGQPGPRGEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDG 1067 HSP 15 Score: 56.9954 bits (136), Expect = 1.484e-7 Identity = 180/550 (32.73%), Postives = 225/550 (40.91%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQ---SGNPGP------------------------QGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDV------------------GPLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPP---------GRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKR 3973
+G G G GLPG G G G G KG LG RG+ SG PG +G+ G G GP GE+G G+ G FGP GP G +G G G G GP G +G+ G G +GS G G G++GD+ GP G G +G RG G KG G +G +G+RG G+ G G G G G +G GVKGDIG+ G TG G+ G G G G G G PG+KG++G G G GE+G G G G G G G PG +G G SG G +GE G GP G +G +G IG+ GP GTSG G G PG G +G+ G G G G+ G G G G G +G G RG G PG G G+ G GP G + G G+ G PG +G R +G G G +G+ G +G+ GP G TG +G+R
Sbjct: 394 KGRSGDIGMQGLPGNKGEKGYRGGRGSKGSLGRRGELGASGRPGDVGPPGENGPPGFQGPRGPPGPQGIRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPM------------------------------GPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIA---------------------------GVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEKGDPGIAGTPGGNGPVGPIGSPGPRGGPGPSGTLGSKGEQGPGGPTGMPGPVGPVGPRGTIGFIGVSGPPGTSGRPGPPGYPGERGETGEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDL---------------------------GPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGER 859 HSP 16 Score: 56.6102 bits (135), Expect = 2.224e-7 Identity = 48/121 (39.67%), Postives = 59/121 (48.76%), Query Frame = 2
Query: 1844 IRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPE---------GIAGVKGDIGIQGETGPRGKDGNKGDEG---------------SVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
IRG SG G GP G++G GE+G G G GIQGP GP+ G G+ G G+QG G G G +GD G + GPPGY G GI+GS G G+ G G+
Sbjct: 462 IRGLSGINGPPGPKGEIGEPGEIGSFGPGGPNGIQGPMGPQGGRGLSGPSGPRGIPGPQGVQGSAGLPGNPGQQGDMGEKGDGGPSGPPGEMGTTGPPGYKGARGIRGSSGAKGDHGPSGQ 582 HSP 17 Score: 55.4546 bits (132), Expect = 4.787e-7 Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 2
Query: 1859 GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G G G G+ G +G G G +GE G +G RGP GIAG G G G G G DG +G G +GP G GNPG KGSRG G G G+K
Sbjct: 1148 GPVGSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVGPDGPRGQPGPIGPMGPIGNPGPKGSRGLDGKVGEPGQK 1240 HSP 18 Score: 55.0694 bits (131), Expect = 7.053e-7 Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGN------PGIKGSRGPVG 2113
G G G G G G +G G G+ G+KG KG+ GI GPRG +G+ G G IG +G G RGK G +G G+ GP G G PG KG GP+G
Sbjct: 1019 GPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGPIGPIGSKGLKGGRGKPGRQGSTGNSGPQGVEGELGIQGPPGRKGELGPIG 1118 HSP 19 Score: 53.5286 bits (127), Expect = 1.812e-6 Identity = 46/101 (45.54%), Postives = 52/101 (51.49%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G RG G KGD G G G G +G G G+ G G G G+ G KGD GI G G +G DG G GS G G G PG +GS G G QG +GE
Sbjct: 1001 GQPGPRGEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGPIGPIGSKGLKGGRGKPGRQGSTGNSGPQGVEGE 1101 HSP 20 Score: 53.5286 bits (127), Expect = 1.890e-6 Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGP---EGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G G +GA G G G GT+G+ G+ G +GE G+ GP GP +G+ G +G G QG TG G G +G+ G GPPG G G G GPVG G G+
Sbjct: 1028 GEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDGPIGPIGSKGLKGGRGKPGRQGSTGNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTSGPSGK 1131 HSP 21 Score: 53.1434 bits (126), Expect = 2.738e-6 Identity = 47/105 (44.76%), Postives = 57/105 (54.29%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKG---------DEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
GS G KG G G+ G+ G G +GV+GE GIQGP G +G G G G G +GP GKDG G D+G VG PG G G++G G G QG GE+
Sbjct: 1073 GSKGLKGGRGKPGRQGSTGNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTSGPSGKDGAPGPPGGSGQAGDDGPVGSPGLPGKAGLQGPAGGSGTQGEAGER 1177 HSP 22 Score: 52.373 bits (124), Expect = 3.933e-6 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPE------GIAGVKGDIGIQGETGPRGKDGN------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G GA G++GP G G+ G+ G +G GE G G RGP GI G +G IG +G+ GPRG+ GN +G G GP G G+ G +G GP G G GE+
Sbjct: 752 GEPGAPGENGPVGMQGSPGQPGEQGSMGERGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGER 859 HSP 23 Score: 51.2174 bits (121), Expect = 8.831e-6 Identity = 42/100 (42.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDG 2131
G +G+RG G KG GP G G +G+VG G+ G++G RG GI G +G G+ G GP+G G G G G G G G +GS+GP G G G
Sbjct: 902 GEKGVRGLLGRKGSVGPIGPDGEKGDVG---PLGKTGLKGTRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNGEKGEQGKQGSQGPTGPVGVQG 998
BLAST of Collagen type IV alpha 2 chain vs. Planmine SMEST
Match: SMESG000077977.1 (SMESG000077977.1) HSP 1 Score: 278.485 bits (711), Expect = 5.875e-75 Identity = 270/874 (30.89%), Postives = 382/874 (43.71%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLP--GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGP---IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA--GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG------PIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE---------VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
RG PG G G+ G+ G+ G +G G KG+ G G GNPG G G RG+ G G G KG++G+ G QG G+ G E G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+G +G +G GI+G PG +GE+G IGLPG G G +PG G GL GP G G +G A G +G +G G+ G++G++G GP G G+ G+ G+VG G+ G++ L I G IG G+ G GP GL G +G RG G GE G +G IG +GE G+ G G G G ++ N + + T+ +F + ++ + + R G + + +C D++LQ ++DPNEG+ DS + C SE + TC+ S + G L Y KP ET WQ+ LR++G + P+L Y +Q+NFL+ ++ + QE+EFLC++S++YGD L ++ +YAT T D IDLSKG+ LGP G+MDKR+Y E GR IFNVTI YD C ++ PG+ +K L T MLPI+D++I +N+ G LG N+ CF
Sbjct: 1803 RGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMG---------------------------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEKG------------------------------TKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRG------------------------TPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKG------------------------ENGNPGIPGEVGIKGEIGDKGLSVI----GKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRGTFILKNLAKE-------------------QLSNISKSLITIFNEETKIINFTQVKIDAVSRMKTVLQSVSSYRSNRGSSSNFPLNSCQDMQLQITIELPEAVWLDPNEGNSDDSFKGACKKSEYKYSAETIKPLLTCVRSSYEAGDLLTYLKPYDSETTWQSELRVDGLVLYPPNLRKGYPHISQLNFLQMRSEYAEQEVEFLCEESIVYGDV-LDNKDSLRYATAFQTFDDNYIDLSKGKSLGPGYGFMDKRIYLFENGRSIFNVTILYDECKFKAPGTFTKMLLSTNKPDMLPIVDYRIKYFNDNGKCMLGANIYPACF 2493 HSP 2 Score: 113.235 bits (282), Expect = 1.671e-24 Identity = 166/534 (31.09%), Postives = 222/534 (41.57%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT-----GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G G G G PG+ GI G + KG+ G +G G PG +G +G G G G LG G+RGK G +G G KGE+ G +G G +G +GE G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+ G +G +G GI+G PG +GE+G +GL GLPG++GL+G G G +G G GD GP G A G +G G +G+ +G+ G+KG+R KG G+PG G VG KGE G GL+ G G GN GPKG G+ GP GP+G GE
Sbjct: 1794 KGEKGDIGFRGFPGENGIKG----VAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK------------------------------GEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEK------------------------------GTKGAKGLPGIEGEPGDQGEIGAMGL---------------------------------IGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALP-GIKGVKGEMGL---------------------------------IGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGE 2160 HSP 3 Score: 94.3597 bits (233), Expect = 8.746e-19 Identity = 138/400 (34.50%), Postives = 177/400 (44.25%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGL--MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR---KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE----RGDRGPPGIA------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT---GPQGKRGNPGPKGETGLMGPIG 4021
G KG+VG G G KGD+G G G KG +G++G +G G+ G+ + +G GV G G PG KG KG+ G IG G PG +G AG GK G G GQ KG KG+ G G RGE G G G+ G++G G PG+ KG G +G GP G + G PGK ++G G G++G G+ RG +G PG+A GN+G +G G +GI G G G+ G +G G IG PG G +GL G++G+PG+KG KG KG PG G G +GE G GL G G RG PGP+G+ GL GPIG
Sbjct: 1768 GEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPG------------------------------------YKGEKGNTG-IG--GNPGLLGFAGNRGKKGVKGNNGQ---KGEKGEIGRQGNRGEMG---------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKG---------------------------NSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGT---KGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIG 2068 HSP 4 Score: 88.9669 bits (219), Expect = 3.640e-17 Identity = 143/413 (34.62%), Postives = 184/413 (44.55%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKG--TRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---------------GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY--LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
G +GL G+K GEKGD+G G+ G+KG +GE G++GS+G G G +G G+ G PG G AG +G G G G+KG KG+IG G G G IG G GK G SG G+ G+KG KG+ G GP+G G P K + S N GPQ GV+GE G+ G G KG++G G G G G PGK G+QG G G GE G +G +G PGI G G +G G +G++ G G G G PGP+G GL G +G+ G +G +KG+KG G IG +G KG+ GP+G+ GNPG GE G+ G IG G
Sbjct: 1786 GEKGLPGKK---------GEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAG---------------------NRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSG--TPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLI---------------------------GEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLI---------GLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDR------GPKGENGNPGIPGEVGIKGEIGDKG 2124 HSP 5 Score: 64.3142 bits (155), Expect = 9.680e-10 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQ---------VGTRGEVGMKGVK-----GEYGI---QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
KG G+ G G KGD GP G+ VG +GE+G KG+ G+YG GP+G EGI G +G IG+ GE G G +G KG+ G +G G G PG+ G RG
Sbjct: 2084 KGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRG 2192 HSP 6 Score: 62.3882 bits (150), Expect = 3.718e-9 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAG--VKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G+ G+KG G G +G +G G KG KG+ G +G G GI G VKG+ G+QG G G G KG+ G G PG G G +G +G GN G+ GEK
Sbjct: 1767 RGEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK 1868 HSP 7 Score: 61.6178 bits (148), Expect = 6.107e-9 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRG------EVGMKGVKGEYGI---QGPRGPEGIAGVKGD------------IGIQGETGPRGKDGNKGDEGSVGPPGYAG-----NPGIKGSRGPVGNQGRDGEK 2137
KG +G+ G SG KGD G SG++G G ++G++G+KGE G +G +G +G+ G++G+ IG+ GE+G RG G +GDEG GP G G PGIKG +G +G G GEK
Sbjct: 1968 KGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEK 2096 HSP 8 Score: 61.6178 bits (148), Expect = 6.756e-9 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD---HGPSGQVGTRGEV--GMKGVKGEYGI---------QGPRGPEGIAGVKGDIGIQGETGPRGKD--GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G+RG+ G +GD HGP G G RG G+KGVKGE G+ +GP+G G G+ G++GI+GE G +G G G G++G G G GI+G RGP+G G G+
Sbjct: 2047 GESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGK 2163 HSP 9 Score: 59.3066 bits (142), Expect = 3.070e-8 Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKG---EYGIQG-------PRGPEGIAGV------------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +GI+G G G GP G GT G++ +KG+KG GIQG P+G G+AG+ KG +GI GE G GK G G +G +G PG G G+KG G G +G G K
Sbjct: 1899 GKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAK 2022 HSP 10 Score: 58.151 bits (139), Expect = 8.075e-8 Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 2
Query: 1829 KGARGIRGSS----------GAKGDHGPSGQVGTRGEVGMKGV---KGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG++GI+G S G G G +G +G +GE G+ G+ KG+ G G G +G+ G G IGIQG G G+ G KG +G+ G PG G PG +G G +G G GE
Sbjct: 1934 KGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGE 2048 HSP 11 Score: 56.6102 bits (135), Expect = 2.330e-7 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTR---GEVGMKGVKGEYGIQGPRGPEGIAGVKGDI------------------GIQGETGPRGKDGN-------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G++G++G KG+ G G+ G R GE+G+ G+ G+ G G G +GI G KG++ GI+G G +G G +GD G G PG GN G+KG +G +G G G+
Sbjct: 1853 RGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGD 1982 HSP 12 Score: 55.8398 bits (133), Expect = 3.731e-7 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG---IKGSRGPVGNQGRDGE 2134
KG GI G+ G G G G+ G +G G KG KGE G QG RG G + G+ G IG G+ G +G G KG+ G GP G +G PG IKG +G G++G G+
Sbjct: 1835 KGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQ 1942 HSP 13 Score: 53.1434 bits (126), Expect = 2.333e-6 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1826 YKGARGIRGSS--GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY------AGNPGIKGSRGPVGNQGRDGEK 2137
+ G GI+G + G G G G G +GE G G+ G G+ G G G GVKG+ G +GE G G+ GN+G+ G +G PG +G PG +G +G GN G+ G K
Sbjct: 1805 FPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPK 1916 HSP 14 Score: 52.373 bits (124), Expect = 4.769e-6 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK------DGNKGDEGSVGPPGYAGNP---GIKGSRGPVGNQGRDG 2131
G+ G KG+ G G G +G++G G G+ G+ G G GI G+KG+IG GE G +G +G GD+G +G G G P G++G+ GP G++G G
Sbjct: 1963 GNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHG 2065 HSP 15 Score: 52.373 bits (124), Expect = 5.016e-6 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKG-----VKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G G G G G +G RG G G VKGE G+QG +G G G KG+ GI G G G GN+G + G GN G KG +G +G QG GE
Sbjct: 1780 GAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKK------GVKGNNGQKGEKGEIGRQGNRGE 1879
BLAST of Collagen type IV alpha 2 chain vs. Planmine SMEST
Match: SMESG000077977.1 (SMESG000077977.1) HSP 1 Score: 278.1 bits (710), Expect = 6.522e-75 Identity = 270/874 (30.89%), Postives = 382/874 (43.71%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLP--GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGP---IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA--GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG------PIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE---------VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKGISTLGLNVLSMCF 5011
RG PG G G+ G+ G+ G +G G KG+ G G GNPG G G RG+ G G G KG++G+ G QG G+ G E G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+G +G +G GI+G PG +GE+G IGLPG G G +PG G GL GP G G +G A G +G +G G+ G++G++G GP G G+ G+ G+VG G+ G++ L I G IG G+ G GP GL G +G RG G GE G +G IG +GE G+ G G G G ++ N + + T+ +F + ++ + + R G + + +C D++LQ ++DPNEG+ DS + C SE + TC+ S + G L Y KP ET WQ+ LR++G + P+L Y +Q+NFL+ ++ + QE+EFLC++S++YGD L ++ +YAT T D IDLSKG+ LGP G+MDKR+Y E GR IFNVTI YD C ++ PG+ +K L T MLPI+D++I +N+ G LG N+ CF
Sbjct: 1808 RGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMG---------------------------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEKG------------------------------TKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRG------------------------TPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKG------------------------ENGNPGIPGEVGIKGEIGDKGLSVI----GKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRGTFILKNLAKE-------------------QLSNISKSLITIFNEETKIINFTQVKIDAVSRMKTVLQSVSSYRSNRGSSSNFPLNSCQDMQLQITIELPEAVWLDPNEGNSDDSFKGACKKSEYKYSAETIKPLLTCVRSSYEAGDLLTYLKPYDSETTWQSELRVDGLVLYPPNLRKGYPHISQLNFLQMRSEYAEQEVEFLCEESIVYGDV-LDNKDSLRYATAFQTFDDNYIDLSKGKSLGPGYGFMDKRIYLFENGRSIFNVTILYDECKFKAPGTFTKMLLSTNKPDMLPIVDYRIKYFNDNGKCMLGANIYPACF 2498 HSP 2 Score: 112.849 bits (281), Expect = 1.729e-24 Identity = 166/534 (31.09%), Postives = 222/534 (41.57%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT-----GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G G G G PG+ GI G + KG+ G +G G PG +G +G G G G LG G+RGK G +G G KGE+ G +G G +G +GE G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+ G +G +G GI+G PG +GE+G +GL GLPG++GL+G G G +G G GD GP G A G +G G +G+ +G+ G+KG+R KG G+PG G VG KGE G GL+ G G GN GPKG G+ GP GP+G GE
Sbjct: 1799 KGEKGDIGFRGFPGENGIKG----VAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK------------------------------GEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEK------------------------------GTKGAKGLPGIEGEPGDQGEIGAMGL---------------------------------IGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALP-GIKGVKGEMGL---------------------------------IGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGE 2165 HSP 3 Score: 94.3597 bits (233), Expect = 9.049e-19 Identity = 138/400 (34.50%), Postives = 177/400 (44.25%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGL--MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR---KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE----RGDRGPPGIA------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT---GPQGKRGNPGPKGETGLMGPIG 4021
G KG+VG G G KGD+G G G KG +G++G +G G+ G+ + +G GV G G PG KG KG+ G IG G PG +G AG GK G G GQ KG KG+ G G RGE G G G+ G++G G PG+ KG G +G GP G + G PGK ++G G G++G G+ RG +G PG+A GN+G +G G +GI G G G+ G +G G IG PG G +GL G++G+PG+KG KG KG PG G G +GE G GL G G RG PGP+G+ GL GPIG
Sbjct: 1773 GEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPG------------------------------------YKGEKGNTG-IG--GNPGLLGFAGNRGKKGVKGNNGQ---KGEKGEIGRQGNRGEMG---------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKG---------------------------NSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGT---KGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIG 2073 HSP 4 Score: 88.9669 bits (219), Expect = 3.830e-17 Identity = 143/413 (34.62%), Postives = 184/413 (44.55%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKG--TRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---------------GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY--LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIGPVG 4030
G +GL G+K GEKGD+G G+ G+KG +GE G++GS+G G G +G G+ G PG G AG +G G G G+KG KG+IG G G G IG G GK G SG G+ G+KG KG+ G GP+G G P K + S N GPQ GV+GE G+ G G KG++G G G G G PGK G+QG G G GE G +G +G PGI G G +G G +G++ G G G G PGP+G GL G +G+ G +G +KG+KG G IG +G KG+ GP+G+ GNPG GE G+ G IG G
Sbjct: 1791 GEKGLPGKK---------GEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAG---------------------NRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSG--TPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLI---------------------------GEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLI---------GLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDR------GPKGENGNPGIPGEVGIKGEIGDKG 2129 HSP 5 Score: 64.3142 bits (155), Expect = 9.601e-10 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQ---------VGTRGEVGMKGVK-----GEYGI---QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
KG G+ G G KGD GP G+ VG +GE+G KG+ G+YG GP+G EGI G +G IG+ GE G G +G KG+ G +G G G PG+ G RG
Sbjct: 2089 KGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRG 2197 HSP 6 Score: 62.3882 bits (150), Expect = 3.782e-9 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAG--VKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G+ G+KG G G +G +G G KG KG+ G +G G GI G VKG+ G+QG G G G KG+ G G PG G G +G +G GN G+ GEK
Sbjct: 1772 RGEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK 1873 HSP 7 Score: 61.6178 bits (148), Expect = 6.108e-9 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRG------EVGMKGVKGEYGI---QGPRGPEGIAGVKGD------------IGIQGETGPRGKDGNKGDEGSVGPPGYAG-----NPGIKGSRGPVGNQGRDGEK 2137
KG +G+ G SG KGD G SG++G G ++G++G+KGE G +G +G +G+ G++G+ IG+ GE+G RG G +GDEG GP G G PGIKG +G +G G GEK
Sbjct: 1973 KGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEK 2101 HSP 8 Score: 61.6178 bits (148), Expect = 6.930e-9 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD---HGPSGQVGTRGEV--GMKGVKGEYGI---------QGPRGPEGIAGVKGDIGIQGETGPRGKD--GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G+RG+ G +GD HGP G G RG G+KGVKGE G+ +GP+G G G+ G++GI+GE G +G G G G++G G G GI+G RGP+G G G+
Sbjct: 2052 GESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGK 2168 HSP 9 Score: 59.3066 bits (142), Expect = 3.096e-8 Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKG---EYGIQG-------PRGPEGIAGV------------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +GI+G G G GP G GT G++ +KG+KG GIQG P+G G+AG+ KG +GI GE G GK G G +G +G PG G G+KG G G +G G K
Sbjct: 1904 GKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAK 2027 HSP 10 Score: 58.151 bits (139), Expect = 8.009e-8 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 1829 KGARGIRGSS----GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG++GI+G S G +GD G +G G G +G+KG KG GI G +G +G+ G G IGIQG G G+ G KG +G+ G PG G PG +G G +G G GE
Sbjct: 1939 KGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGE 2053 HSP 11 Score: 56.6102 bits (135), Expect = 2.350e-7 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTR---GEVGMKGVKGEYGIQGPRGPEGIAGVKGDI------------------GIQGETGPRGKDGN-------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G++G++G KG+ G G+ G R GE+G+ G+ G+ G G G +GI G KG++ GI+G G +G G +GD G G PG GN G+KG +G +G G G+
Sbjct: 1858 RGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGD 1987 HSP 12 Score: 55.8398 bits (133), Expect = 3.827e-7 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG---IKGSRGPVGNQGRDGE 2134
KG GI G+ G G G G+ G +G G KG KGE G QG RG G + G+ G IG G+ G +G G KG+ G GP G +G PG IKG +G G++G G+
Sbjct: 1840 KGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQ 1947 HSP 13 Score: 53.1434 bits (126), Expect = 2.334e-6 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1826 YKGARGIRGSS--GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY------AGNPGIKGSRGPVGNQGRDGEK 2137
+ G GI+G + G G G G G +GE G G+ G G+ G G G GVKG+ G +GE G G+ GN+G+ G +G PG +G PG +G +G GN G+ G K
Sbjct: 1810 FPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPK 1921 HSP 14 Score: 52.373 bits (124), Expect = 4.810e-6 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK------DGNKGDEGSVGPPGYAGNP---GIKGSRGPVGNQGRDG 2131
G+ G KG+ G G G +G++G G G+ G+ G G GI G+KG+IG GE G +G +G GD+G +G G G P G++G+ GP G++G G
Sbjct: 1968 GNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHG 2070 HSP 15 Score: 52.373 bits (124), Expect = 4.974e-6 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKG-----VKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G G G G G +G RG G G VKGE G+QG +G G G KG+ GI G G G GN+G + G GN G KG +G +G QG GE
Sbjct: 1785 GAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKK------GVKGNNGQKGEKGEIGRQGNRGE 1884
BLAST of Collagen type IV alpha 2 chain vs. Planmine SMEST
Match: SMESG000077977.1 (SMESG000077977.1) HSP 1 Score: 269.24 bits (687), Expect = 3.455e-72 Identity = 265/861 (30.78%), Postives = 376/861 (43.67%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLP--GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGP---IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA--GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG------PIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE---------VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKG 4972
RG PG G G+ G+ G+ G +G G KG+ G G GNPG G G RG+ G G G KG++G+ G QG G+ G E G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+G +G +G GI+G PG +GE+G IGLPG G G +PG G GL GP G G +G A G +G +G G+ G++G++G GP G G+ G+ G+VG G+ G++ L I G IG G+ G GP GL G +G RG G GE G +G IG +GE G+ G G G G ++ N + + T+ +F + ++ + + R G + + +C D++LQ ++DPNEG+ DS + C SE + TC+ S + G L Y KP ET WQ+ LR++G + P+L Y +Q+NFL+ ++ + QE+EFLC++S++YGD L ++ +YAT T D IDLSKG+ LGP G+MDKR+Y E GR IFNVTI YD C ++ PG+ +K L T MLPI+D++I +N+ G
Sbjct: 1327 RGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMG---------------------------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEKG------------------------------TKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRG------------------------TPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKG------------------------ENGNPGIPGEVGIKGEIGDKGLSVI----GKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRGTFILKNLAKE-------------------QLSNISKSLITIFNEETKIINFTQVKIDAVSRMKTVLQSVSSYRSNRGSSSNFPLNSCQDMQLQITIELPEAVWLDPNEGNSDDSFKGACKKSEYKYSAETIKPLLTCVRSSYEAGDLLTYLKPYDSETTWQSELRVDGLVLYPPNLRKGYPHISQLNFLQMRSEYAEQEVEFLCEESIVYGDV-LDNKDSLRYATAFQTFDDNYIDLSKGKSLGPGYGFMDKRIYLFENGRSIFNVTILYDECKFKAPGTFTKMLLSTNKPDMLPIVDYRIKYFNDNG 2004 HSP 2 Score: 111.694 bits (278), Expect = 3.978e-24 Identity = 166/534 (31.09%), Postives = 222/534 (41.57%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT-----GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G G G G PG+ GI G + KG+ G +G G PG +G +G G G G LG G+RGK G +G G KGE+ G +G G +G +GE G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+ G +G +G GI+G PG +GE+G +GL GLPG++GL+G G G +G G GD GP G A G +G G +G+ +G+ G+KG+R KG G+PG G VG KGE G GL+ G G GN GPKG G+ GP GP+G GE
Sbjct: 1318 KGEKGDIGFRGFPGENGIKG----VAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK------------------------------GEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEK------------------------------GTKGAKGLPGIEGEPGDQGEIGAMGL---------------------------------IGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALP-GIKGVKGEMGL---------------------------------IGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGE 1684 HSP 3 Score: 88.9669 bits (219), Expect = 3.469e-17 Identity = 142/410 (34.63%), Postives = 183/410 (44.63%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKG--TRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---------------GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY--LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G +GL G+K GEKGD+G G+ G+KG +GE G++GS+G G G +G G+ G PG G AG +G G G G+KG KG+IG G G G IG G GK G SG G+ G+KG KG+ G GP+G G P K + S N GPQ GV+GE G+ G G KG++G G G G G PGK G+QG G G GE G +G +G PGI G G +G G +G++ G G G G PGP+G GL G +G+ G +G +KG+KG G IG +G KG+ GP+G+ GNPG GE G+ G IG
Sbjct: 1310 GEKGLPGKK---------GEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAG---------------------NRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSG--TPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLI---------------------------GEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLI---------GLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGD------RGPKGENGNPGIPGEVGIKGEIG 1645 HSP 4 Score: 64.3142 bits (155), Expect = 1.058e-9 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQ---------VGTRGEVGMKGVK-----GEYGI---QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
KG G+ G G KGD GP G+ VG +GE+G KG+ G+YG GP+G EGI G +G IG+ GE G G +G KG+ G +G G G PG+ G RG
Sbjct: 1608 KGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRG 1716 HSP 5 Score: 62.3882 bits (150), Expect = 3.928e-9 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAG--VKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G+ G+KG G G +G +G G KG KG+ G +G G GI G VKG+ G+QG G G G KG+ G G PG G G +G +G GN G+ GEK
Sbjct: 1291 RGEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK 1392 HSP 6 Score: 61.6178 bits (148), Expect = 6.135e-9 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD---HGPSGQVGTRGEV--GMKGVKGEYGI---------QGPRGPEGIAGVKGDIGIQGETGPRGKD--GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G+RG+ G +GD HGP G G RG G+KGVKGE G+ +GP+G G G+ G++GI+GE G +G G G G++G G G GI+G RGP+G G G+
Sbjct: 1571 GESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGK 1687 HSP 7 Score: 61.6178 bits (148), Expect = 7.198e-9 Identity = 53/129 (41.09%), Postives = 69/129 (53.49%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRG------EVGMKGVKGEYG---------------IQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAG-----NPGIKGSRGPVGNQGRDGEK 2137
KG +G+ G SG KGD G SG++G G ++G++G+KGE G I+G G +G G G IG+ GE+G RG G +GDEG GP G G PGIKG +G +G G GEK
Sbjct: 1492 KGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEK 1620 HSP 8 Score: 59.3066 bits (142), Expect = 3.299e-8 Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKG---EYGIQG-------PRGPEGIAGV------------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +GI+G G G GP G GT G++ +KG+KG GIQG P+G G+AG+ KG +GI GE G GK G G +G +G PG G G+KG G G +G G K
Sbjct: 1423 GKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAK 1546 HSP 9 Score: 58.151 bits (139), Expect = 8.115e-8 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 1829 KGARGIRGSS----GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG++GI+G S G +GD G +G G G +G+KG KG GI G +G +G+ G G IGIQG G G+ G KG +G+ G PG G PG +G G +G G GE
Sbjct: 1458 KGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGE 1572 HSP 10 Score: 56.225 bits (134), Expect = 2.817e-7 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTR---GEVGMKGVKGEYGIQGPRGPEGIAGVKGDI------------------GIQGETGPRGKDGN-------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G++G++G KG+ G G+ G R GE+G+ G+ G+ G G G +GI G KG++ GI+G G +G G +GD G G PG GN G+KG +G +G G G+
Sbjct: 1377 RGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGD 1506 HSP 11 Score: 55.8398 bits (133), Expect = 3.846e-7 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG---IKGSRGPVGNQGRDGE 2134
KG GI G+ G G G G+ G +G G KG KGE G QG RG G + G+ G IG G+ G +G G KG+ G GP G +G PG IKG +G G++G G+
Sbjct: 1359 KGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQ 1466 HSP 12 Score: 53.1434 bits (126), Expect = 2.366e-6 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1826 YKGARGIRGSS--GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY------AGNPGIKGSRGPVGNQGRDGEK 2137
+ G GI+G + G G G G G +GE G G+ G G+ G G G GVKG+ G +GE G G+ GN+G+ G +G PG +G PG +G +G GN G+ G K
Sbjct: 1329 FPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPK 1440 HSP 13 Score: 52.373 bits (124), Expect = 4.958e-6 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKG-----VKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G G G G G +G RG G G VKGE G+QG +G G G KG+ GI G G G GN+G + G GN G KG +G +G QG GE
Sbjct: 1304 GAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKK------GVKGNNGQKGEKGEIGRQGNRGE 1403 HSP 14 Score: 51.9878 bits (123), Expect = 5.042e-6 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK------DGNKGDEGSVGPPGYAGNP---GIKGSRGPVGNQGRDG 2131
G+ G KG+ G G G +G++G G G+ G+ G G GI G+KG+IG GE G +G +G GD+G +G G G P G++G+ GP G++G G
Sbjct: 1487 GNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHG 1589
BLAST of Collagen type IV alpha 2 chain vs. Planmine SMEST
Match: SMESG000077977.1 (SMESG000077977.1) HSP 1 Score: 265.388 bits (677), Expect = 5.811e-71 Identity = 265/861 (30.78%), Postives = 376/861 (43.67%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLP--GKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGE------VGIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGP---IGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEA--GERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMG------PIGPVGEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKIRNPPEGSSGRYKRSTRAQSFVDINDALFDKVDKITNKIKRIRFPTGHNKDSAARTCADIKLQRKQSTDGQYYIDPNEGSGKDSIEVECVFSEE---------VKTCISSVKQQGGLYNYKKPMKGETNWQNSLRLEGAISRAPDLHSMYVDHTQMNFLRNQNSKSYQEIEFLCDQSVIYGDSELSEENKFKYATVLMTHDFKSIDLSKGERLGPNEGYMDKRVYKDEFGRPIFNVTIEYDGCMYRTPGSSSKFKLETTDLSMLPIIDFQINDYNNKG 4972
RG PG G G+ G+ G+ G +G G KG+ G G GNPG G G RG+ G G G KG++G+ G QG G+ G E G+ G+LG+ G+ G G G KG G +GK+G KG G GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+G +G +G GI+G PG +GE+G IGLPG G G +PG G GL GP G G +G A G +G +G G+ G++G++G GP G G+ G+ G+VG G+ G++ L I G IG G+ G GP GL G +G RG G GE G +G IG +GE G+ G G G G ++ N + + T+ +F + ++ + + R G + + +C D++LQ ++DPNEG+ DS + C SE + TC+ S + G L Y KP ET WQ+ LR++G + P+L Y +Q+NFL+ ++ + QE+EFLC++S++YGD L ++ +YAT T D IDLSKG+ LGP G+MDKR+Y E GR IFNVTI YD C ++ PG+ +K L T MLPI+D++I +N+ G
Sbjct: 1808 RGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMG---------------------------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEKG------------------------------TKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRG------------------------TPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKG------------------------ENGNPGIPGEVGIKGEIGDKGLSVI----GKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRGTFILKNLAKE-------------------QLSNISKSLITIFNEETKIINFTQVKIDAVSRMKTVLQSVSSYRSNRGSSSNFPLNSCQDMQLQITIELPEAVWLDPNEGNSDDSFKGACKKSEYKYSAETIKPLLTCVRSSYEAGDLLTYLKPYDSETTWQSELRVDGLVLYPPNLRKGYPHISQLNFLQMRSEYAEQEVEFLCEESIVYGDV-LDNKDSLRYATAFQTFDDNYIDLSKGKSLGPGYGFMDKRIYLFENGRSIFNVTILYDECKFKAPGTFTKMLLSTNKPDMLPIVDYRIKYFNDNG 2485 HSP 2 Score: 107.071 bits (266), Expect = 1.227e-22 Identity = 161/549 (29.33%), Postives = 212/549 (38.62%), Query Frame = 2
Query: 2486 RGPPGTRGPSGLPGKPGIDGKEGSIGPKGDLGPRGQSGNPGPQGIRGARGQSGPTGELGSKGDRGKFGPQGPTGDKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKGTRGEV------------------GIKGSEGKTGLMG----SRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT-----GPQGKRGNPGPKGETGLMGPIGPVGEDGE 4042
+G G G G PG+ GI G + KG+ G +G G PG +G +G G G G LG G+RGK G +G G KG EKG G G +G +G IG G G +G GK G+KG +G V GIKG++G G+ G +RGPQG G G PG+ G GVKG+ GL+G +G G IG++G GK G G G+ G++G KG+ +G GE+ G +G +G GI+G PG +GE+G +GL GLPG++GL+G G G +G G GD GP G A G +G G +G+ +G+ G+KG+R KG G+PG G VG KGE G GL+ G G GN GPKG G+ GP GP+G GE
Sbjct: 1799 KGEKGDIGFRGFPGENGIKG----VAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKG---------------------------------------------EKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENG---------------------------------NIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGE---IGQPGEK------------------------------GTKGAKGLPGIEGEPGDQGEIGAMGL---------------------------------IGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALP-GIKGVKGEMGL---------------------------------IGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGE 2165 HSP 3 Score: 92.4337 bits (228), Expect = 3.347e-18 Identity = 138/400 (34.50%), Postives = 177/400 (44.25%), Query Frame = 2
Query: 2876 GRKGSVGPIGPDGEKGDVGPLGKTGLKGTRGEVGIKGSEGKTGL--MGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQGVEGELGIQGPPGR---KGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGE----RGDRGPPGIA------GNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERYLKGIKGSPGTIGAVGSKGEPGPPGLT---GPQGKRGNPGPKGETGLMGPIG 4021
G KG+VG G G KGD+G G G KG +G++G +G G+ G+ + +G GV G G PG KG KG+ G IG G PG +G AG GK G G GQ KG KG+ G G RGE G G G+ G++G G PG+ KG G +G GP G + G PGK ++G G G++G G+ RG +G PG+A GN+G +G G +GI G G G+ G +G G IG PG G +GL G++G+PG+KG KG KG PG G G +GE G GL G G RG PGP+G+ GL GPIG
Sbjct: 1773 GEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPG------------------------------------YKGEKGNTG-IG--GNPGLLGFAGNRGKKGVKGNNGQ---KGEKGEIGRQGNRGEMG---------------------------EIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKG---------------------------NSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGT---KGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIG 2073 HSP 4 Score: 86.6557 bits (213), Expect = 1.631e-16 Identity = 142/410 (34.63%), Postives = 183/410 (44.63%), Query Frame = 2
Query: 2858 GVRGLLGRKGSVGPIGPDGEKGDVGPL---GKTGLKG--TRGEVGIKGSEGKTGLMGSRGPQGVSGEPGSPGDAGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVKGDIGLIGPTGAPGRIGEAGPPGKTGASGAEGQPGVKGTKGDTGILGPRGEQGLDXXXXXXXXXXXXXXXXXXXXXXXXXNSGPQ---------------GVEGELGIQGPPGRKGELGPIGLPGPVGTXXXXXXXXXXXXXXXXXXXXXXXXXXSPGLPGKAGLQGPAGGSGTQGEAGERGDRGPPGIAGNMGQRGPNGPIGIVXXXXXXXXXXXXXXXXXXXXXXXXXSRGLDGKVGEPGQKGERY--LKGIKGSPGTIGAVGSKGEPGPPGLTGPQGKRGNPGPKGETGLMGPIG 4021
G +GL G+K GEKGD+G G+ G+KG +GE G++GS+G G G +G G+ G PG G AG +G G G G+KG KG+IG G G G IG G GK G SG G+ G+KG KG+ G GP+G G P K + S N GPQ GV+GE G+ G G KG++G G G G G PGK G+QG G G GE G +G +G PGI G G +G G +G++ G G G G PGP+G GL G +G+ G +G +KG+KG G IG +G KG+ GP+G+ GNPG GE G+ G IG
Sbjct: 1791 GEKGLPGKK---------GEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAG---------------------NRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSG--TPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLI---------------------------GEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLI---------GLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGD------RGPKGENGNPGIPGEVGIKGEIG 2126 HSP 5 Score: 64.3142 bits (155), Expect = 1.147e-9 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQ---------VGTRGEVGMKGVK-----GEYGI---QGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRG 2104
KG G+ G G KGD GP G+ VG +GE+G KG+ G+YG GP+G EGI G +G IG+ GE G G +G KG+ G +G G G PG+ G RG
Sbjct: 2089 KGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGKVGYNGTKGEIGEIGEKGDKGLPGVPGQRG 2197 HSP 6 Score: 62.003 bits (149), Expect = 6.058e-9 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 1838 RGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAG--VKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
RG +G+ G+KG G G +G +G G KG KG+ G +G G GI G VKG+ G+QG G G G KG+ G G PG G G +G +G GN G+ GEK
Sbjct: 1772 RGEKGTVGSKGHPGAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEK 1873 HSP 7 Score: 61.6178 bits (148), Expect = 7.995e-9 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRG------EVGMKGVKGEYGI---QGPRGPEGIAGVKGD------------IGIQGETGPRGKDGNKGDEGSVGPPGYAG-----NPGIKGSRGPVGNQGRDGEK 2137
KG +G+ G SG KGD G SG++G G ++G++G+KGE G +G +G +G+ G++G+ IG+ GE+G RG G +GDEG GP G G PGIKG +G +G G GEK
Sbjct: 1973 KGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEK 2101 HSP 8 Score: 61.6178 bits (148), Expect = 7.995e-9 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGD---HGPSGQVGTRGEV--GMKGVKGEYGI---------QGPRGPEGIAGVKGDIGIQGETGPRGKD--GNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
G G+RG+ G +GD HGP G G RG G+KGVKGE G+ +GP+G G G+ G++GI+GE G +G G G G++G G G GI+G RGP+G G G+
Sbjct: 2052 GESGLRGTPGPEGDEGLHGPIGDDGPRGTALPGIKGVKGEMGLIGDIGEKGDRGPKGENGNPGIPGEVGIKGEIGDKGLSVIGKIGKYGTIGNTGPKGLEGIRGPRGPIGLVGEVGK 2168 HSP 9 Score: 58.9214 bits (141), Expect = 4.049e-8 Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKG---EYGIQG-------PRGPEGIAGV------------KGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGEK 2137
G +GI+G G G GP G GT G++ +KG+KG GIQG P+G G+AG+ KG +GI GE G GK G G +G +G PG G G+KG G G +G G K
Sbjct: 1904 GKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAK 2027 HSP 10 Score: 57.7658 bits (138), Expect = 1.074e-7 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 1829 KGARGIRGSS----GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRG---------PEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
KG++GI+G S G +GD G +G G G +G+KG KG GI G +G +G+ G G IGIQG G G+ G KG +G+ G PG G PG +G G +G G GE
Sbjct: 1939 KGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGE 2053 HSP 11 Score: 56.225 bits (134), Expect = 3.339e-7 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTR---GEVGMKGVKGEYGIQGPRGPEGIAGVKGDI------------------GIQGETGPRGKDGN-------KGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
+G +G++G++G KG+ G G+ G R GE+G+ G+ G+ G G G +GI G KG++ GI+G G +G G +GD G G PG GN G+KG +G +G G G+
Sbjct: 1858 RGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQSNVNRGPQGDPGLAGIPGENGNIGVKGEKGLMGISGEKGD 1987 HSP 12 Score: 55.4546 bits (132), Expect = 5.483e-7 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 1829 KGARGIRGSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEG---IAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPG---IKGSRGPVGNQGRDGE 2134
KG GI G+ G G G G+ G +G G KG KGE G QG RG G + G+ G IG G+ G +G G KG+ G GP G +G PG IKG +G G++G G+
Sbjct: 1840 KGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPKGNSGTPGKMAIKGIKGTKGSKGIQGQ 1947 HSP 13 Score: 52.7582 bits (125), Expect = 3.543e-6 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1826 YKGARGIRGSS--GAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGY------AGNPGIKGSRGPVGNQGRDGEK 2137
+ G GI+G + G G G G G +GE G G+ G G+ G G G GVKG+ G +GE G G+ GN+G+ G +G PG +G PG +G +G GN G+ G K
Sbjct: 1810 FPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKKGVKGNNGQKGEKGEIGRQGNRGEMGEIGLPGILGKIGTSGKPGKQGIKGFKGNVGKSGPK 1921 HSP 14 Score: 51.9878 bits (123), Expect = 6.434e-6 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 1850 GSSGAKGDHGPSGQVGTRGEVGMKGVKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGK------DGNKGDEGSVGPPGYAGNP---GIKGSRGPVGNQGRDG 2131
G+ G KG+ G G G +G++G G G+ G+ G G GI G+KG+IG GE G +G +G GD+G +G G G P G++G+ GP G++G G
Sbjct: 1968 GNIGVKGEKGLMGISGEKGDIGKSGKLGKDGLIGEPGKIGIQGLKGEIGQPGEKGTKGAKGLPGIEGEPGDQGEIGAMGLIGLPGESGLRGTPGPEGDEGLHG 2070 HSP 15 Score: 51.6026 bits (122), Expect = 7.422e-6 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 2
Query: 1832 GARGIRGSSGAKGDHGPSGQVGTRGEVGMKG-----VKGEYGIQGPRGPEGIAGVKGDIGIQGETGPRGKDGNKGDEGSVGPPGYAGNPGIKGSRGPVGNQGRDGE 2134
GA+G G G G G G +G RG G G VKGE G+QG +G G G KG+ GI G G G GN+G + G GN G KG +G +G QG GE
Sbjct: 1785 GAKGDIGEKGLPGKKGEKGDIGFRGFPGENGIKGVAVKGEAGVQGSQGMPGYKGEKGNTGIGGNPGLLGFAGNRGKK------GVKGNNGQKGEKGEIGRQGNRGE 1884 The following BLAST results are available for this feature:
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Collagen type IV alpha 2 chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5 |
