NFX1-type zinc finger-containing protein 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30003423 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Human
Match: ZNFX1 (zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]) HSP 1 Score: 48.1358 bits (113), Expect = 3.636e-6 Identity = 25/58 (43.10%), Postives = 32/58 (55.17%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGH 180 C EGHRCPL C++ C C V V K +P C HE+ + C + C C + L CGH Sbjct: 1327 CQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGH 1384
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Human
Match: ZNFX1 (zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]) HSP 1 Score: 48.1358 bits (113), Expect = 3.636e-6 Identity = 25/58 (43.10%), Postives = 32/58 (55.17%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGH 180 C EGHRCPL C++ C C V V K +P C HE+ + C + C C + L CGH Sbjct: 1327 CQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGH 1384
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Zebrafish
Match: znfx1 (zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]) HSP 1 Score: 65.855 bits (159), Expect = 2.071e-12 Identity = 52/128 (40.62%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHE-KEYPCHVTPKCLEDCIK-QCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 CD C L CGH VC R C+ E KEY KC++DC K C GH C +C Q CG+C+ SV KIIP CQH QK+ C ++P +F C+ KT+P C H + CG+S Sbjct: 410 CDQPCQYRLDCGH-----------VC----TRMCHPYDAEHKEY------KCMKDCSKVLCELGHKCTRRCHQECGKCMVSVDKIIPSCQHNQKVPCHKDPAEFVCQVRCEKTLP-CGHPCKATCGES 515 HSP 2 Score: 63.929 bits (154), Expect = 8.795e-12 Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCN-KCKHEKEYPCHVT------PKCLEDCIKQCAFGHLC 336 C GH+C C++ CGKC V V KI+P C H +K+ CH P C V C++ LPCGH + C +S + M++ KC H +E PC V+ P+C C GH C Sbjct: 449 CELGHKCTRRCHQECGKCMVSVDKIIPSCQHNQKVPCHKDPAEFVCQVRCEKTLPCGHPCKATC-GESCTSQCMVRVPIELKCGHMQEEPCFVSRDHKNEPRCNTKCGTVLKCGHSC 564
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Zebrafish
Match: znfx1 (zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]) HSP 1 Score: 64.3142 bits (155), Expect = 6.903e-12 Identity = 52/128 (40.62%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHE-KEYPCHVTPKCLEDCIK-QCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 CD C L CGH VC R C+ E KEY KC++DC K C GH C +C Q CG+C+ SV KIIP CQH QK+ C ++P +F C+ KT+P C H + CG+S Sbjct: 1166 CDQPCQYRLDCGH-----------VC----TRMCHPYDAEHKEY------KCMKDCSKVLCELGHKCTRRCHQECGKCMVSVDKIIPSCQHNQKVPCHKDPAEFVCQVRCEKTLP-CGHPCKATCGES 1271 HSP 2 Score: 61.6178 bits (148), Expect = 6.135e-11 Identity = 44/117 (37.61%), Postives = 59/117 (50.43%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSK-SVVCKVMIKRQCNKCKHEKEYPCHVT------PKCLEDCIKQCAFGHLC 336 C GH+C C++ CGKC V V KI+P C H +K+ CH P C V C++ LPCGH + C + C V + + KC H +E PC V+ P+C C GH C Sbjct: 1205 CELGHKCTRRCHQECGKCMVSVDKIIPSCQHNQKVPCHKDPAEFVCQVRCEKTLPCGHPCKATCGESCTSQCMVRVPIEL-KCGHMQEEPCFVSRDHKNEPRCNTKCGTVLKCGHSC 1320
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Xenopus
Match: dhx8 (DEAH-box helicase 8 [Source:Xenbase;Acc:XB-GENE-6087171]) HSP 1 Score: 47.3654 bits (111), Expect = 5.709e-6 Identity = 43/122 (35.25%), Postives = 54/122 (44.26%), Query Frame = 1 Query: 154 CDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 CD LPCGH+ C K + CNK PCH C GH C KC + CG+C + V K I KC H Q + CSQ+ D F CK + + C H+ CGQ+ Sbjct: 408 CDFRLPCGHVCTLNCHPYDSEHKDYV---CNK-------PCHKVI---------CENGHTCKNKCSEPCGKCKQPVPKQIEKCGHIQDIPCSQSADTFVCKVHCAQFL-QCGHKCVRWCGQT 509
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A0K6FZN3 (NFX1-type zinc finger-containing protein 1 [Mus musculus] OS=Rhizoctonia solani OX=456999 GN=RSOLAG22IIIB_09535 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.748e-22 Identity = 56/182 (30.77%), Postives = 84/182 (46.15%), Query Frame = 1 Query: 55 KCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCP--SKSVVCKVMIKRQCNKCKHEKEYPCHVTP---KCLEDCIKQCAFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 KC VT+ +P C H M CH + C +ELP C H C ++ +C+ ++++ CKH + PCH P +C + K+ HL C Q + C V K +P+C H KM C ++P F C V+K++P C+H +M C + C + V K P C H Sbjct: 1491 KCLTQVTRQLPSCGHNATMPCHQEVASFSCQEPVSKELPHCEHRAVLPCSMNPETYLCQEKVEKELPSCKHRTQIPCHQDPSGVQCSQRVEKKLPCDHLVTAPCHQDLSKYKCRIEVEKPLPRCGHSAKMPCYRSPTQFACLEHVMKSLPNCDHRAQMLCSKDTQAYACPEPVEKRFPNCDH 1672 HSP 2 Score: 88.1965 bits (217), Expect = 9.396e-17 Identity = 50/186 (26.88%), Postives = 85/186 (45.70%), Query Frame = 1 Query: 58 CNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPS--KSVVCKVMIKRQCNKCKHEKEYPCHVTPK---CLEDCIKQCAFGHLCILKCFQTCGR------CVESVVKIIPKCQHEQKMQCSQ--NPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C V K +P C H ++ CH P + C +++LPC H+ C C++ +++ +C H + PC+ +P CLE +K C + C + C E V K P C H +++ C Q +P C+ + K +PTC H + C + L +C++ V + +P C+H Sbjct: 1548 CQEKVEKELPSCKHRTQIPCHQDPSGVQCSQRVEKKLPCDHLVTAPCHQDLSKYKCRIEVEKPLPRCGHSAKMPCYRSPTQFACLEHVMKSLPN---CDHRAQMLCSKDTQAYACPEPVEKRFPNCDHRKQLICHQLQDPAFNLCQERLEKELPTCKHRVTLPCHKPLSEHKCQQRVQRELPFCEH 1730 HSP 3 Score: 68.5514 bits (166), Expect = 5.489e-10 Identity = 42/147 (28.57%), Postives = 65/147 (44.22%), Query Frame = 1 Query: 154 CDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQ---TCGRCVESVVKIIPKCQH-EQKMQCSQ--NPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C L CGHI CPS +C + P H++ KC C++ C H C +C++ T C + + +C H +QC + PD +C T V + +P+C H M C Q + C++ V K +P C+H Sbjct: 1407 CGGALSCGHI----CPS---MC-------------HADDPNHISTKCQRHCLRLCPRSHPCDRQCWECSTTISNCRFPITDLQLRCGHIYPPIQCHRFITPDKLKCLTQVTRQLPSCGHNATMPCHQEVASFSCQEPVSKELPHCEH 1533
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Match: R7VLU0 (TNFR-Cys domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_193995 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.299e-20 Identity = 71/217 (32.72%), Postives = 97/217 (44.70%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPK---CLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQN----------------------------PDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKT 558 K+C GH C CY C C +V K +P C HE+ + C L P + C VIC RE PCGHI C K + C ++K+ C H PCH+ PK C C ++ GH+C C++ C C V+K +P C H+QK+ CS PD +C T+V +C H+ + C Q + C VVKT Sbjct: 332 KSCPSGHACASLCYIKCPPCKKLVAKTIPDCGHEQMVSCCLDPGNFTCQVICKREKPCGHICTKACGEKCLPCTQLVKKTLPDCGH--MVPCHLDPKEFSCQYPCQRRNPCGHVCTKACWEECLPCCHPVIKSLPNCAHKQKILCSDEIERVKCTSPCGKKNPCGHSCPALCSEPCPD--KCNTLVPNRRWSCGHQVSLPCWQEPENTSCSVEVVKT 544 HSP 2 Score: 58.9214 bits (141), Expect = 1.293e-6 Identity = 45/145 (31.03%), Postives = 66/145 (45.52%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C + C L CGH Q +C ++KE H+ +C++ C K C GH C C+ C C + V K IP C HEQ + C +P +F C+ + + P C H CG+ + C ++V KT+P C H Sbjct: 296 CTLPCSFRLKCGHTCQLKCHP-----------------YDKE---HIEYECIKPCTKSCPSGHACASLCYIKCPPCKKLVAKTIPDCGHEQMVSCCLDPGNFTCQVICKREKP-CGHICTKACGEKC--LPCTQLVKKTLPDCGH 417
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A3Q0JNX2 (NFX1-type zinc finger-containing protein 1-like isoform X1 OS=Ciona intestinalis OX=7719 GN=LOC100180525 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.310e-19 Identity = 61/163 (37.42%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 16 GHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTP---KCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHE 495 GH+C C++ CG C V+V K MPVC H + M+C ++P C + C + CGH Q C + C V ++++ KC H +E C +P KC E C K + GH C C+ C C +V K +P C H Q+M+CS +P F+C+ + KT+P C H+ Sbjct: 1444 GHKCLKQCWKDCGSCPVLVDKTMPVCQHIQTMKCGIKPEDFVCKMPCPKMFSCGHQCQLYCGEECKPCGVKVEKKIPKCGHTQEMACFESPLHHKCKESCEKTLSCGHSCPELCYVRCPSCRVNVEKTMPTCGHVQEMECSCDPKYFQCQEICDKTLP-CGHK 1605
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A066UZ15 (C3H1-type domain-containing protein (Fragment) OS=Rhizoctonia solani AG-8 WAC10335 OX=1287689 GN=RSAG8_12208 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.182e-18 Identity = 53/174 (30.46%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 91 CSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPS--KSVVCKVMIKRQCNKCKHEKEYPCH---VTPKCL---EDCIKQCAFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVR--CKKIVVKTIPKCKH 576 C H M CH P C + ++ELPC H+ + C + C++ ++ +C H+ + CH CL E + +C H + C Q C+ V K +PKC H KM C Q+ ++ C V KT+PTC+H +M C ++ + R C++ V +T+P C H Sbjct: 1489 CGHRMHMFCHEDPAKALCPQLVEKELPCAHVVKVPCHQDISNYTCRMKAEKPLPRCDHQAKVLCHQDITNYTCLVEVEKPLPRC--DHPAKMPCHQDISNYTCLVEVEKPLPKCDHRAKMPCHQDISNYRCLVEVEKTLPTCDHRTKMPCHRNPIFTRFACQERVTRTLPDCDH 1660 HSP 2 Score: 92.4337 bits (228), Expect = 3.212e-18 Identity = 62/199 (31.16%), Postives = 87/199 (43.72%), Query Frame = 1 Query: 28 PLNCYETCG-----KCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRC---PSKSVVCKVMIKRQCNKCKHEKEYPCH------VTPKCLEDCIKQCAFGHLCILKCFQ--TCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 P CY KC V V K +P C H M CH P C + L CGH C P+K++ C +++++ C H + PCH E + +C H + C Q T C+ V K +P+C H KM C Q+ ++ C V K +P C+H +M C Q + RC V KT+P C H Sbjct: 1436 PTQCYRVSIRLEEIKCPVPVVKQLPSCDHHATMLCHEDPASYACQERTSKSLGCGHRMHMFCHEDPAKAL-CPQLVEKEL-PCAHVVKVPCHQDISNYTCRMKAEKPLPRC--DHQAKVLCHQDITNYTCLVEVEKPLPRCDHPAKMPCHQDISNYTCLVEVEKPLPKCDHRAKMPCHQDISNYRCLVEVEKTLPTCDH 1630 HSP 3 Score: 77.7962 bits (190), Expect = 4.113e-13 Identity = 57/218 (26.15%), Postives = 86/218 (39.45%), Query Frame = 1 Query: 58 CNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPS--KSVVCKVMIKRQCNKCKHEKEYPCH---VTPKCL---EDCIKQCAFGHLCILKCFQ----TCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVV--------------------------------KTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C + K +P C H+ K+ CH + C V ++ LP C H + C + C V +++ KC H + PCH +CL E + C H + C + T C E V + +P C H +M C +N + + C T+V K IPTC H M C + +C+K V K +P C+H Sbjct: 1533 CRMKAEKPLPRCDHQAKVLCHQDITNYTCLVEVEKPLPRCDHPAKMPCHQDISNYTCLVEVEKPLPKCDHRAKMPCHQDISNYRCLVEVEKTLPTC--DHRTKMPCHRNPIFTRFACQERVTRTLPDCDHSAEMLCRENVNTYACNTLVEQRFTDCDHRKQLTCHKLRGRDLAASQCQEQVEKDIPTCKHTATMPCHKDPQSYKCQKWVEKELPFCEH 1748 HSP 4 Score: 76.6406 bits (187), Expect = 8.758e-13 Identity = 47/172 (27.33%), Postives = 71/172 (41.28%), Query Frame = 1 Query: 19 HRCPLNCYETCG--KCNVIVTKIMPVCSHEKKMQCHLQP--HHMDCDVICDRELP-CGHIGQYRCPSK--SVVCKVMIKRQCNKCKHEKEYPCH-VTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMEC 510 HR + C++ +C V V K +P C H KM CH P C R LP C H + C + C +++++ C H K+ CH + + L +C E V K IP C+H M C ++P ++C+ V K +P C H + C Sbjct: 1602 HRAKMPCHQDISNYRCLVEVEKTLPTCDHRTKMPCHRNPIFTRFACQERVTRTLPDCDHSAEMLCRENVNTYACNTLVEQRFTDCDHRKQLTCHKLRGRDL-------------------AASQCQEQVEKDIPTCKHTATMPCHKDPQSYKCQKWVEKELPFCEHRASIPC 1754
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A166GLJ4 (p-loop containing nucleoside triphosphate hydrolase protein OS=Fibularhizoctonia sp. CBS 109695 OX=436010 GN=FIBSPDRAFT_1046508 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.281e-18 Identity = 53/206 (25.73%), Postives = 91/206 (44.17%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQ---PHHMDCDVICDRELP-CGHIGQYRCPSKSV--VCKVMIKRQCNKCKHEKEYPC------HVTPKCLEDCIKQCAFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 + C GH C C + C C + + C H K Q + CD + + LP C H + RC S +C + + C+H E C ++ K + + C H ++C C + V+K +P C H KM+CS + + C V++++P C+H EM C + + + C ++V+K++P C+H Sbjct: 1599 RLCPRGHPCRRQCVDPCSDCRFPIPSVQLPCGHRKDSVLCSQFDSLSDLSCDEVVIKSLPGCDHTAKMRCSSDVAHYLCDKAVIKSLPGCEHTAEMKCSRDVAHYLCDKTVIQSLPGCE--HTAEMRCSSDVAHYLCDKVVIKSLPGCDHTAKMRCSSDVAHYLCDKAVIQSLPGCDHTAEMRCSRDVAHYLCDEVVIKSLPDCEH 1802 HSP 2 Score: 81.6481 bits (200), Expect = 1.717e-14 Identity = 47/176 (26.70%), Postives = 70/176 (39.77%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCG-------------------------------RCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C CD L CGHI ++C S P HV+ C+ C + C GH C +C C C E V+K +P C H KM+CS + + C V+K++P C H EM+C + + + C K V++++P C+H Sbjct: 1563 CLRACDVLLKCGHICPFKCHSDD--------------------PNHVSITCIRACRRLCPRGHPCRRQCVDPCSDCRFPIPSVQLPCGHRKDSVLCSQFDSLSDLSCDEVVIKSLPGCDHTAKMRCSSDVAHYLCDKAVIKSLPGCEHTAEMKCSRDVAHYLCDKTVIQSLPGCEH 1718 HSP 3 Score: 77.0258 bits (188), Expect = 6.854e-13 Identity = 48/174 (27.59%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 91 CSHEKKMQCHLQ-PHHMD--CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEK------EYPCHVTPKCLEDCIKQC-AFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C H +CH P+H+ C C R P GH + +C C+ I C H K ++ C E IK H ++C C ++V+K +P C+H +M+CS++ + C V++++P C H EM C + + C K+V+K++P C H Sbjct: 1573 CGHICPFKCHSDDPNHVSITCIRACRRLCPRGHPCRRQCVDPCSDCRFPIPSVQLPCGHRKDSVLCSQFDSLSDLSCDEVVIKSLPGCDHTAKMRCSSDVAHYLCDKAVIKSLPGCEHTAEMKCSRDVAHYLCDKTVIQSLPGCEHTAEMRCSSDVAHYLCDKVVIKSLPGCDH 1746 HSP 4 Score: 74.3294 bits (181), Expect = 6.302e-12 Identity = 46/183 (25.14%), Postives = 82/183 (44.81%), Query Frame = 1 Query: 58 CNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPSKSV---VCKVMIKRQCNKCKHEKEYPC------HVTPKCLEDCIKQCAFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKC 570 C+ +V K +P C H KM+C H CD + LP C H + +C S+ V +C + + C+H E C ++ K + + C H ++C C ++V++ +P C H +M+CS++ + C +V+K++P C H E +C + C+ + C Sbjct: 1649 CDEVVIKSLPGCDHTAKMRCSSDVAHYLCDKAVIKSLPGCEHTAEMKC-SRDVAHYLCDKTVIQSLPGCEHTAEMRCSSDVAHYLCDKVVIKSLPGC--DHTAKMRCSSDVAHYLCDKAVIQSLPGCDHTAEMRCSRDVAHYLCDEVVIKSLPDCEHTVETKCSSDITKYLCQAFCGGIMDNC 1828
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Cavefish
Match: znfx1 (zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]) HSP 1 Score: 58.9214 bits (141), Expect = 4.590e-10 Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSK-SVVCKVMIKRQCNKCKHEKEYPCHVT 285 C GHRCP CY+ C KC V++ KI+P C H +KM CH +P C C + L CGH Q C + C+V++ KC H ++ C + Sbjct: 1085 CELGHRCPRPCYQECRKCEVLLEKIIPQCQHIQKMPCHQEPELFVCQEPCQKMLSCGHQCQASCGEPCTTFCQVIVPMTL-KCGHTQDEACGTS 1177
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000979.1 (pep scaffold:Pmarinus_7.0:GL478231:754:10442:1 gene:ENSPMAG00000000889.1 transcript:ENSPMAT00000000979.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 67.781 bits (164), Expect = 7.508e-14 Identity = 52/189 (27.51%), Postives = 75/189 (39.68%), Query Frame = 1 Query: 7 CNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSK-SVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKC 570 C GHRCP C+E CG+C V + K +P C H +++ CH+ P C V C + L C H + C + CK + + C H KE CH + C C C C +C C E ++ + C C+ + P C E C S RC++ +T C Sbjct: 394 CALGHRCPKACWEKCGECEVPLEKKIPQCGHAQRVPCHVPPEEFACQVPCRKTLRCAHRCRRACGAACESKCKETVDAEL-PCAHRKEVACHTDLAGVA-CYAPCPAALDCGHPCRGSCRECHEQRFHKECAQPCQRALVCGH-----RCREPCTRDCPPCALPCENRCVHS----RCRRPCGETCAPC 571 HSP 2 Score: 60.077 bits (144), Expect = 3.054e-11 Identity = 46/146 (31.51%), Postives = 67/146 (45.89%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIK-QCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C + C+ L CGH+ C + H + P HV CL+ C K CA GH C C++ CG C + K IP+C H Q++ C P++F C+ KT+ C H CG + + +CK+ V +P C H Sbjct: 355 CTLPCEFRLQCGHV-------------------CTRACHPYD-PEHVEFLCLKPCQKVLCALGHRCPKACWEKCGECEVPLEKKIPQCGHAQRVPCHVPPEEFACQVPCRKTL-RCAHRCRRACGAACE-SKCKETVDAELP-CAH 477
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Nematostella
Match: EDO30690 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T022]) HSP 1 Score: 64.6994 bits (156), Expect = 1.564e-12 Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSK-SVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVV 384 K C+ GH CP C++ C C V+V K++P C HE+++ CH++P C C + L CGH +C + C VMI+R C H+ CHV P ++ C C C+ C C C++ V Sbjct: 1154 KLCDLGHDCPRRCFQKCEPCKVLVAKVIPKCQHEQQIPCHVEPEKFKCQEPCPKTLKCGHQCAAKCGDDCTKECMVMIERTL-PCGHKHTLKCHVDPTTVK-CRTPCNAKLKCLHTCAGNCNSCLQQRV 1280 HSP 2 Score: 50.8322 bits (120), Expect = 9.768e-8 Identity = 45/127 (35.43%), Postives = 60/127 (47.24%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQ-CAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 C V C L CGH+ C K H + P HV +C + C K+ C GH C +CFQ C C V K+IPKCQHEQ++ C P+ F+C+ KT+ C H+ +CG Sbjct: 1117 CMVPCATRLECGHV-------------------CEKVCHPGD-PDHVEYECRKPCPKKLCDLGHDCPRRCFQKCEPCKVLVAKVIPKCQHEQQIPCHVEPEKFKCQEPCPKTL-KCGHQCAAKCGDD 1222
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000034890.1 (SMESG000034890.1) HSP 1 Score: 400.593 bits (1028), Expect = 2.608e-129 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH Sbjct: 1180 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 1371 HSP 2 Score: 144.05 bits (362), Expect = 1.100e-39 Identity = 89/199 (44.72%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPSK--SVVCKVMIKRQCNKCKHEKEYPCHVTPKCLE------DCIKQCAFGHLCILKCFQTCGR--CVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIP 564 K C GH C L C++TCG+C V KI+P C HE+KMQC P +C + + +P C H + C V CK ++ + KCKHE+E C P I C H ++C Q+ C VVKIIPKC+HEQ+M+CSQ+P+ F CKTMVVKTIPTCNHEQEMEC QS +Y +CK +V +P Sbjct: 1283 KQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKHEQEMECSQNPDYFNCKTMVVKTIPTC--NHEQEMECSQSLDYVTCKTMVVKIIPKCKHEQEMECSQSPNYFNCKTMVVKTIPTCNHEQEMECSQSSNYFKCKTMVNIVLP 1479 HSP 3 Score: 80.4925 bits (197), Expect = 1.180e-17 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDY 528 K C GH C L C++ C KC + V+K++P+C+H + + C+ DC++ + L CGH+ I R+C + K E + CLE C K C GH C LKC + C RC + KIIP C H Q + C ++P+ +CKT K C H + + C + Y Sbjct: 1554 KYCENGHLCELKCFQPC-KCLIPVSKVIPICNHSQNIPCYKDAESSDCEIKNELILKCGHV---------------IVRECKETKILNEIKSGLY-NCLELCKKICENGHPCSLKCHEAC-RCQILISKIIPNCNHSQVLPCYKSPESVDCKT---KYELPCGHTKLILCNEIFLY 1708 HSP 4 Score: 68.5514 bits (166), Expect = 1.819e-13 Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 58 CNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPS-------------------------KSVVCKVM-----IKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 C +V K +P C+HE++M+C ++ C + + LPCGH +C K++V ++ I+R C + K + V C++ CIK C GHLC LKCFQ C +C+ V K+IP C H Q + C ++ + +C+ + + I C H EC ++ Sbjct: 1442 CKTMVVKTIPTCNHEQEMECSQSSNYFKCKTMVNIVLPCGHSNISKCKVGDDSISRHIFKSKYSLLKDPEPIHCKTIVDYILPCGHTIQRLCKEIKENLDQSIKVN--CVQPCIKYCENGHLCELKCFQPC-KCLIPVSKVIPICNHSQNIPCYKDAESSDCE-IKNELILKCGHVIVRECKET 1621 HSP 5 Score: 64.6994 bits (156), Expect = 3.317e-12 Identity = 55/151 (36.42%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRC-----PSKSVVCKVMIKRQCNKCKHEKEYPCHVT-PKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C+ IC + L CGH + C K CK ++ CN+ H C+ T KC E+C K C GH C L C++TCG+C V KI+P C HE+KMQC P +C + + +P C H + C V CK ++ + KCKH Sbjct: 1119 CNEICSKRLECGHSCKMYCHVLDKYHKKYKCKENCEKTCNE-GHRCPLNCYETCGKCKENCKKTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPSK--SVVCKVMIKRQCNKCKH 1265 HSP 6 Score: 54.6842 bits (130), Expect = 1.030e-8 Identity = 38/131 (29.01%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAF----GHLCILKCFQTCGRCVESV 381 K C GH C L C+E C +C ++++KI+P C+H + + C+ P +DC ELPCGH C + +++ QC K + + C QC GH C C++ C C + + Sbjct: 1640 KICENGHPCSLKCHEAC-RCQILISKIIPNCNHSQVLPCYKSPESVDCKT--KYELPCGHTKLILCNEIFLYDELLRSDQCEKSSPSSSISISNSNLTILRCEFQCDRVLLCGHKCSRLCYENCEPCTKRI 1767
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000034890.1 (SMESG000034890.1) HSP 1 Score: 399.823 bits (1026), Expect = 5.247e-129 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH Sbjct: 1124 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 1315 HSP 2 Score: 143.665 bits (361), Expect = 1.257e-39 Identity = 89/199 (44.72%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPSK--SVVCKVMIKRQCNKCKHEKEYPCHVTPKCLE------DCIKQCAFGHLCILKCFQTCG--RCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIP 564 K C GH C L C++TCG+C V KI+P C HE+KMQC P +C + + +P C H + C V CK ++ + KCKHE+E C P I C H ++C Q+ C VVKIIPKC+HEQ+M+CSQ+P+ F CKTMVVKTIPTCNHEQEMEC QS +Y +CK +V +P Sbjct: 1227 KQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKHEQEMECSQNPDYFNCKTMVVKTIPTC--NHEQEMECSQSLDYVTCKTMVVKIIPKCKHEQEMECSQSPNYFNCKTMVVKTIPTCNHEQEMECSQSSNYFKCKTMVNIVLP 1423 HSP 3 Score: 80.4925 bits (197), Expect = 1.189e-17 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDY 528 K C GH C L C++ C KC + V+K++P+C+H + + C+ DC++ + L CGH+ I R+C + K E + CLE C K C GH C LKC + C RC + KIIP C H Q + C ++P+ +CKT K C H + + C + Y Sbjct: 1498 KYCENGHLCELKCFQPC-KCLIPVSKVIPICNHSQNIPCYKDAESSDCEIKNELILKCGHV---------------IVRECKETKILNEIKSGLY-NCLELCKKICENGHPCSLKCHEAC-RCQILISKIIPNCNHSQVLPCYKSPESVDCKT---KYELPCGHTKLILCNEIFLY 1652 HSP 4 Score: 68.5514 bits (166), Expect = 1.683e-13 Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 58 CNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPS-------------------------KSVVCKVM-----IKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQS 519 C +V K +P C+HE++M+C ++ C + + LPCGH +C K++V ++ I+R C + K + V C++ CIK C GHLC LKCFQ C +C+ V K+IP C H Q + C ++ + +C+ + + I C H EC ++ Sbjct: 1386 CKTMVVKTIPTCNHEQEMECSQSSNYFKCKTMVNIVLPCGHSNISKCKVGDDSISRHIFKSKYSLLKDPEPIHCKTIVDYILPCGHTIQRLCKEIKENLDQSIKVN--CVQPCIKYCENGHLCELKCFQPC-KCLIPVSKVIPICNHSQNIPCYKDAESSDCE-IKNELILKCGHVIVRECKET 1565 HSP 5 Score: 65.0846 bits (157), Expect = 2.818e-12 Identity = 55/151 (36.42%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRC-----PSKSVVCKVMIKRQCNKCKHEKEYPCHVT-PKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKTMVVKTIPTCNHEQEMECGQSLDYVRCKKIVVKTIPKCKH 576 C+ IC + L CGH + C K CK ++ CN+ H C+ T KC E+C K C GH C L C++TCG+C V KI+P C HE+KMQC P +C + + +P C H + C V CK ++ + KCKH Sbjct: 1063 CNEICSKRLECGHSCKMYCHVLDKYHKKYKCKENCEKTCNE-GHRCPLNCYETCGKCKENCKKTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELP-CGHIGQYRCPSK--SVVCKVMIKRQCNKCKH 1209 HSP 6 Score: 54.6842 bits (130), Expect = 9.099e-9 Identity = 38/131 (29.01%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAF----GHLCILKCFQTCGRCVESV 381 K C GH C L C+E C +C ++++KI+P C+H + + C+ P +DC ELPCGH C + +++ QC K + + C QC GH C C++ C C + + Sbjct: 1584 KICENGHPCSLKCHEAC-RCQILISKIIPNCNHSQVLPCYKSPESVDCKT--KYELPCGHTKLILCNEIFLYDELLRSDQCEKSSPSSSISISNSNLTILRCEFQCDRVLLCGHKCSRLCYENCEPCTKRI 1711
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000034905.1 (SMESG000034905.1) HSP 1 Score: 67.0106 bits (162), Expect = 5.578e-13 Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPC-HVTPKCLEDCIKQCAFGHLCILKCFQTCGRC 369 K C GHRC L C+ETC KC V + K++P C H ++++C+ P C C R LPCGH C K C ++ + +C HE +Y C C E C K H CI +CGRC Sbjct: 1234 KLCTNGHRCKLKCWETCSKCLVTIAKVIPGCEHVQELECYRNPEPNLCKNKCGRLLPCGHNCIRMCKDKCADCLEIVTKVSPECGHEADYQCSDRNFICKEKCRKILDCEHPCI----GSCGRC 1353 HSP 2 Score: 60.4622 bits (145), Expect = 8.833e-11 Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKT-------------------------MVVKTIPTCNHEQEMECGQSLDYV---RCKKIV 549 C+ +C++ L CGH C +R C+ H +CLE C K C GH C LKC++TC +C+ ++ K+IP C+H Q+++C +NP+ CK +V K P C HE + +C +++ +C+KI+ Sbjct: 1198 CEELCNQRLTCGH-----------AC----RRGCHILDRN-----HQKVRCLEKCTKLCTNGHRCKLKCWETCSKCLVTIAKVIPGCEHVQELECYRNPEPNLCKNKCGRLLPCGHNCIRMCKDKCADCLEIVTKVSPECGHEADYQCSDR-NFICKEKCRKIL 1340
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000034905.1 (SMESG000034905.1) HSP 1 Score: 67.0106 bits (162), Expect = 6.441e-13 Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 1 KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPC-HVTPKCLEDCIKQCAFGHLCILKCFQTCGRC 369 K C GHRC L C+ETC KC V + K++P C H ++++C+ P C C R LPCGH C K C ++ + +C HE +Y C C E C K H CI +CGRC Sbjct: 1261 KLCTNGHRCKLKCWETCSKCLVTIAKVIPGCEHVQELECYRNPEPNLCKNKCGRLLPCGHNCIRMCKDKCADCLEIVTKVSPECGHEADYQCSDRNFICKEKCRKILDCEHPCI----GSCGRC 1380 HSP 2 Score: 60.4622 bits (145), Expect = 9.271e-11 Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 1 Query: 142 CDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVVKIIPKCQHEQKMQCSQNPDDFECKT-------------------------MVVKTIPTCNHEQEMECGQSLDYV---RCKKIV 549 C+ +C++ L CGH C +R C+ H +CLE C K C GH C LKC++TC +C+ ++ K+IP C+H Q+++C +NP+ CK +V K P C HE + +C +++ +C+KI+ Sbjct: 1225 CEELCNQRLTCGH-----------AC----RRGCHILDRN-----HQKVRCLEKCTKLCTNGHRCKLKCWETCSKCLVTIAKVIPGCEHVQELECYRNPEPNLCKNKCGRLLPCGHNCIRMCKDKCADCLEIVTKVSPECGHEADYQCSDR-NFICKEKCRKIL 1367
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000034856.1 (SMESG000034856.1) HSP 1 Score: 57.3806 bits (137), Expect = 1.148e-9 Identity = 52/152 (34.21%), Postives = 66/152 (43.42%), Query Frame = 1 Query: 16 GHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVICDRELPCGHIGQYRCPSKSVVCKVMIKRQCNKCKHEKEYPCHVTPKCLEDCIKQCAFGHLCILKCFQTCGRCVESVV--------KIIPKCQHEQKMQCSQNPDDF 447 GH CP C+E CG C K P C H K M+C DC IC R+L CGH +C C V ++R+C+ C ++ + C C CI GH KC TC C S + II C H+ CS N D+F Sbjct: 1296 GHPCPRKCWEQCGNCCTKELKTFPTCKHTKLMECFKIAQPSDCVEICKRQLSCGHQCMKKCNDPCSPCLVKVERKCSDCGNKNKQNCS-DDHCTMPCIALLGCGH----KCTGTCYLCNNSRLHVTCDKNCNIISICGHKNMSNCS-NFDNF 1441 The following BLAST results are available for this feature:
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of NFX1-type zinc finger-containing protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of NFX1-type zinc finger-containing protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30003423 ID=SMED30003423|Name=NFX1-type zinc finger-containing protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=576bpback to top protein sequence of SMED30003423-orf-1 >SMED30003423-orf-1 ID=SMED30003423-orf-1|Name=SMED30003423-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=192bp KTCNEGHRCPLNCYETCGKCNVIVTKIMPVCSHEKKMQCHLQPHHMDCDVback to top Annotated Terms
The following terms have been associated with this transcript:
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