SMED30003362

Overview
NameSMED30003362
Smed IDSMED30003362
Length (bp)7100
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30003362 (SMED30003362) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30003362 (SMED30003362) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30003362 (SMED30003362) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30003362 (SMED30003362) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30003362

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30003362h1SMcG0010469 dd_Smed_v4_61640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30003362h1SMcG0010469 dd_Smed_v4_61640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30003362h1SMcG0010469 dd_Smed_v4_61640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30003362h1SMcG0010469 dd_Smed_v6_23677_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30003362 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000035:252607..276303 -35343
Homology
[Close]
BLAST of SMED30003362 vs. Ensembl Human
Match: FREM2 (FRAS1 related extracellular matrix 2 [Source:HGNC Symbol;Acc:HGNC:25396])

HSP 1 Score: 58.151 bits (139), Expect = 2.585e-7
Identity = 64/229 (27.95%), Postives = 105/229 (45.85%), Query Frame = 3 
Query: 5619 PSKILSINFPCVKHSQKLLSLSLFE--NITAICAKLYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPNSDSDMVGLRI---YHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVM------VSSNHIKIATNLLSERDDFYVS--LDLLPLYGNIYLDHIPVSGFKYSHILEGRVLYVQSD----MMRSTDRFDISLSLASRNQKI 6254
            P +IL+  F   +    +LS +     ++    A + F +T+ P +G M V SG     I     L    +IK G V Y +    S +D   L +   +HV  ++    + V ++ +  +V I   P G L+    V+      +++N IK  TN   E DD  ++  L+  PLYG I ++ IP   F    ILEG V+Y  +     ++   D F++SLS  S+  +I
Sbjct:  829 PPEILNTGFTIQEKGHHILSETELHVNDVDTDVAHISFTLTQAPKHGHMRV-SGQ----ILHVGGLFHLEDIKQGRVSYAHNGDKSLTDSCSLEVSDRHHVVPIT----LRVNVRPVDDEVPILSHPTGTLESYLDVLENGATEITANVIK-GTN--EETDDLMLTFLLEDPPLYGEILVNGIPAEQFTQRDILEGSVVYTHTSGEIGLLPKADSFNLSLSDMSQEWRI 1045
[Close]
BLAST of SMED30003362 vs. Ensembl Human
Match: FREM1 (FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399])

HSP 1 Score: 54.299 bits (129), Expect = 3.789e-6
Identity = 76/374 (20.32%), Postives = 144/374 (38.50%), Query Frame = 1 
Query: 3811 YDQNNHLIETDCAPTTLKRFQ-----VLFSNDLTQISERYLLSECRLI-----NEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFT--SVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAY--LNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYFI 4890
            +D NN     DC   T+K  +     +L    +    +R  L+   L+     ++  +++Y IT  P +G ++Y H   V   I  FSQMD++   +   C + K + +V                 S+D+F F +   ++     +   +E    ++ V+  N GL + Q A   L+   +++           + +     L F ++  P+ G+++    G     F  QD+    + Y H G  S   D F  MA    N        +  EP+   + + Q  +    I+L      + S+V +     Y I+      K      +D   I  +++   +G +          + F+Q+D+N   I +I
Sbjct: 1372 WDGNNRSPALDCQ-ITIKDMEKGDIVILTKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYGQIEYVHYPGV--PITNFSQMDVVGQTV---CYVHKSKVTV-----------------SSDRFRFIISNGLRTEHGVFEITLETVDRALPVVTRNKGLRLAQGAVGLLSPDLLQL----------TDPDTPAENLTFLLVQLPQHGQLYLWGTGLLQHNFTQQDVDSKNVAYRHSGGDSQT-DCFTFMATDGTNQGFIVNGRVWEEPVLFTIQVDQLDKTAPRITLLH----SPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKILQGPKHGHLENTTTGEFIHEKFSQKDLNSKTILYI 1707
[Close]
BLAST of SMED30003362 vs. Ensembl Human
Match: FREM1 (FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399])

HSP 1 Score: 54.299 bits (129), Expect = 3.789e-6
Identity = 76/374 (20.32%), Postives = 144/374 (38.50%), Query Frame = 1 
Query: 3811 YDQNNHLIETDCAPTTLKRFQ-----VLFSNDLTQISERYLLSECRLI-----NEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFT--SVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAY--LNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYFI 4890
            +D NN     DC   T+K  +     +L    +    +R  L+   L+     ++  +++Y IT  P +G ++Y H   V   I  FSQMD++   +   C + K + +V                 S+D+F F +   ++     +   +E    ++ V+  N GL + Q A   L+   +++           + +     L F ++  P+ G+++    G     F  QD+    + Y H G  S   D F  MA    N        +  EP+   + + Q  +    I+L      + S+V +     Y I+      K      +D   I  +++   +G +          + F+Q+D+N   I +I
Sbjct: 1372 WDGNNRSPALDCQ-ITIKDMEKGDIVILTKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYGQIEYVHYPGV--PITNFSQMDVVGQTV---CYVHKSKVTV-----------------SSDRFRFIISNGLRTEHGVFEITLETVDRALPVVTRNKGLRLAQGAVGLLSPDLLQL----------TDPDTPAENLTFLLVQLPQHGQLYLWGTGLLQHNFTQQDVDSKNVAYRHSGGDSQT-DCFTFMATDGTNQGFIVNGRVWEEPVLFTIQVDQLDKTAPRITLLH----SPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKILQGPKHGHLENTTTGEFIHEKFSQKDLNSKTILYI 1707
[Close]
BLAST of SMED30003362 vs. Ensembl Mouse
Match: Cspg4 (chondroitin sulfate proteoglycan 4 [Source:MGI Symbol;Acc:MGI:2153093])

HSP 1 Score: 70.0922 bits (170), Expect = 4.247e-11
Identity = 132/662 (19.94%), Postives = 258/662 (38.97%), Query Frame = 1 
Query: 1759 DPPRIVVDDK---IVLSDLQ--VNPYVIFNPFPTEHSCGEFIFTYNNSIETVSDKIPLKLKYET------FLTRN------VYFQTTKQC-DFQIWAVKGNQTSKSFVLSLIP-RSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLXXXXXXXXXXXEVFNSG---TKTWKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAF-EFEAYSLDALNSIWFSLKNVPFHG-FISYGASGRKITRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI--------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNV-------NVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNL 3612
            DPPRI+       ++L   Q  + P  IF  +  + +C    F     +  VS  +P++ + +       F  R       VY        D       G Q S    L ++  R ++ I + NTG+  +  S   ILP++L +   N     +  L   +       ++   +G      W  +  F Q D+ +G VRY+S +D     Q T   + L + V  + +  ++  V + +  V   R     L+ ++     L+  +L  +  E E       ++  + L   P  G  +  G        FS ++L+ G++ Y  +  +       +   F V       S      ++I  +  P+  +L    ++ P G     ++A++L++ + N  S+++ ++  P  GK          + +  F+ +D++ G L Y  ++ E +ED   F +  + G    D   E     F +  +  N+  P +      +V+     +L+   + F+D DS  + A  V+   ++         S +   E     + FT  +L K Q+ F + G     L   + DG+    ++  V       +V N   LV+P   +  I       D+  + +  +  + S  N  ++ +T+ P++G L
Sbjct:  552 DPPRIIFPHGSLMVILEHTQKPLGPE-IFQAYDPDSACEGLTF----QLLGVSSGVPVEHRDQPGEPATEFSCRELEVGDIVYVHRGGPAQDLTFRVSDGMQASAPATLKVVAVRPAIQI-LHNTGLHLAQGSAAAILPANLSVET-NAVGQDVSVLFRVTGTLQFGELQKQGAGGVEGTEWWDTLAFHQRDVEQGRVRYLS-TDPQHHTQDTVEDLILEVQVGQETLSNLSFPVTIQRATVWMLRLEP--LHTQNPHQETLTPAHLEASLEEEEEEGSPQPHTFHYELVQAPRRGNLLLQGTRLSDGESFSQSDLQAGRVTY--RATMRTSEAADDSFRFRVTSPP-HFSPLYTFPIHIGGD--PNAPVLTNVLLMVPEGGEGV-LSADHLFVKSLNSASYLYEVMEQPHHGKLAWRDPKGKSTPVTSFTNEDLLHGRLVYQHDDSETIEDDIPF-VATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLL------FGSIVAMEEPTRPIYRFTQEDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGTI-------DTAVLQLDTNLDIRSG-NEVHYHVTAGPQWGQL 1182
[Close]
BLAST of SMED30003362 vs. UniProt/SwissProt
Match: sp|Q8VHY0|CSPG4_MOUSE (Chondroitin sulfate proteoglycan 4 OS=Mus musculus OX=10090 GN=Cspg4 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.971e-10
Identity = 132/662 (19.94%), Postives = 258/662 (38.97%), Query Frame = 1 
Query: 1759 DPPRIVVDDK---IVLSDLQ--VNPYVIFNPFPTEHSCGEFIFTYNNSIETVSDKIPLKLKYET------FLTRN------VYFQTTKQC-DFQIWAVKGNQTSKSFVLSLIP-RSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLXXXXXXXXXXXEVFNSG---TKTWKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAF-EFEAYSLDALNSIWFSLKNVPFHG-FISYGASGRKITRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI--------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNV-------NVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNL 3612
            DPPRI+       ++L   Q  + P  IF  +  + +C    F     +  VS  +P++ + +       F  R       VY        D       G Q S    L ++  R ++ I + NTG+  +  S   ILP++L +   N     +  L   +       ++   +G      W  +  F Q D+ +G VRY+S +D     Q T   + L + V  + +  ++  V + +  V   R     L+ ++     L+  +L  +  E E       ++  + L   P  G  +  G        FS ++L+ G++ Y  +  +       +   F V       S      ++I  +  P+  +L    ++ P G     ++A++L++ + N  S+++ ++  P  GK          + +  F+ +D++ G L Y  ++ E +ED   F +  + G    D   E     F +  +  N+  P +      +V+     +L+   + F+D DS  + A  V+   ++         S +   E     + FT  +L K Q+ F + G     L   + DG+    ++  V       +V N   LV+P   +  I       D+  + +  +  + S  N  ++ +T+ P++G L
Sbjct:  552 DPPRIIFPHGSLMVILEHTQKPLGPE-IFQAYDPDSACEGLTF----QLLGVSSGVPVEHRDQPGEPATEFSCRELEVGDIVYVHRGGPAQDLTFRVSDGMQASAPATLKVVAVRPAIQI-LHNTGLHLAQGSAAAILPANLSVET-NAVGQDVSVLFRVTGTLQFGELQKQGAGGVEGTEWWDTLAFHQRDVEQGRVRYLS-TDPQHHTQDTVEDLILEVQVGQETLSNLSFPVTIQRATVWMLRLEP--LHTQNPHQETLTPAHLEASLEEEEEEGSPQPHTFHYELVQAPRRGNLLLQGTRLSDGESFSQSDLQAGRVTY--RATMRTSEAADDSFRFRVTSPP-HFSPLYTFPIHIGGD--PNAPVLTNVLLMVPEGGEGV-LSADHLFVKSLNSASYLYEVMEQPHHGKLAWRDPKGKSTPVTSFTNEDLLHGRLVYQHDDSETIEDDIPF-VATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLL------FGSIVAMEEPTRPIYRFTQEDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGTI-------DTAVLQLDTNLDIRSG-NEVHYHVTAGPQWGQL 1182
[Close]
BLAST of SMED30003362 vs. UniProt/SwissProt
Match: sp|Q5SZK8|FREM2_HUMAN (FRAS1-related extracellular matrix protein 2 OS=Homo sapiens OX=9606 GN=FREM2 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.241e-6
Identity = 64/229 (27.95%), Postives = 105/229 (45.85%), Query Frame = 3 
Query: 5619 PSKILSINFPCVKHSQKLLSLSLFE--NITAICAKLYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPNSDSDMVGLRI---YHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVM------VSSNHIKIATNLLSERDDFYVS--LDLLPLYGNIYLDHIPVSGFKYSHILEGRVLYVQSD----MMRSTDRFDISLSLASRNQKI 6254
            P +IL+  F   +    +LS +     ++    A + F +T+ P +G M V SG     I     L    +IK G V Y +    S +D   L +   +HV  ++    + V ++ +  +V I   P G L+    V+      +++N IK  TN   E DD  ++  L+  PLYG I ++ IP   F    ILEG V+Y  +     ++   D F++SLS  S+  +I
Sbjct:  829 PPEILNTGFTIQEKGHHILSETELHVNDVDTDVAHISFTLTQAPKHGHMRV-SGQ----ILHVGGLFHLEDIKQGRVSYAHNGDKSLTDSCSLEVSDRHHVVPIT----LRVNVRPVDDEVPILSHPTGTLESYLDVLENGATEITANVIK-GTN--EETDDLMLTFLLEDPPLYGEILVNGIPAEQFTQRDILEGSVVYTHTSGEIGLLPKADSFNLSLSDMSQEWRI 1045
[Close]
BLAST of SMED30003362 vs. TrEMBL
Match: A0A5N3VC49 (Uncharacterized protein (Fragment) OS=Muntiacus muntjak OX=9888 GN=FD754_011638 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.415e-18
Identity = 176/920 (19.13%), Postives = 356/920 (38.70%), Query Frame = 1 
Query: 2245 SYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKIT---RFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI--------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLY-------GLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRND----IISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVL--FSNDLTQISERYLLSECRLINEKHQIVYNITKSPN--------HGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGR--PVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYF 4887
            +  F Q D+ +G VRY+S +D     + T   V L + V  + +  +T  V + +  V+  R   L  + ++ +   L+  +L    E EA       +  + +   P  G +     G +++    F+  +L+ G++ Y       +   +++   F V       S      +YI  +  P   +L    +  P G     ++A++L++ + N  S+++ ++  P+ G+ +        + +  F+ +D++ G L Y  +N E  ED   F +  + G    D   E     F +  +  N+  P +      +V+     +L+   + F+D DS    A  V+   ++         S +   E     + FT  +L   ++ F + G     +   + DG+    ++  V     Y       GLV+P   +  I       D+  + +  +  + S  +  ++ +TS P +G L        LR D      + QD+L+  ++Y            D + F ++    +    ++V I             IE   AP  L R + +  F  +  +I  R LL   +       IV+++   P+        HG++     S  ++ + RFSQ  +  GR+ Y       R  V                  +D FS  + + + A +   R ++E     + +      V +   +TL    +++   ++          +L  LH +++  P+ G +   +  +   +  F ++++++  I Y+H G+   L D F ++A  +    Q+  ++    T+ +L       I L +   +  W  + V I    L    D+D+            +D+VY ++  SNG V         + SFTQ  ++  L+ F
Sbjct:  695 TQAFHQRDVEQGRVRYLS-TDPQHHAEDTVESVALEVQVGQEALSNLTFPVTVQRATVRLLRLEPL--HTQNTQQEALTTAHLEATLE-EAGPHP--TTFLYEVVQAPRKGNLQL--QGTRLSDGQSFTQDDLRAGRVTYGA--TARDSEAVEDAFHFRVTAPP-HFSPLYTFPIYIGGD--PDAPVLTNVLLSVPEGGEGV-LSADHLFVKSLNSASYLYEVMERPRHGRLVWRDAQDKATMVTSFTNEDLLHGRLVYQHDNSETTEDDIPF-VATRQGEGSSDMAWEEVRGVFRVAIQPVNDHAPVQTISRVFHVARGGQRLLTTDDVAFSDADSGFADAQLVLTRKDLL------FGSIVAVDEPSRPIYRFTQEDLRNRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSGLVVPQGGQGTI-------DTAVLPLDTNLDIRSG-DEVHYQVTSGPRWGQL--------LRADQPVTSFTQQDLLERAILYSHNGSLSP---RDTLAFSVEAGPVHTEATLQVTIA------------IEGPVAPLHLVRHKKIYVFQGEAAEI-RRDLLEAAQEAVPPADIVFSVKTPPSAGYLVMLSHGAVAAEPPS--LDPVHRFSQEAVDAGRVLY----LHSRPEVW-----------------SDTFSLDVSSGLGAPLEGVRVELEVLPAAIPLEAQNFSVPEGGARTLAPPLLRVAGPYF---------PTLPSLHLQLLEPPRHGALQREEGPQDGSLSAFSWREVEQQLIRYVHDGS-ETLADSFVLVANASEMDRQSHPVV---FTITILPVNDQPPI-LTTNTGLQMWEETTVPIPAEALTGT-DSDSG----------PEDLVYTLERPSNGRVVLSTAPSTEIHSFTQAQLDGGLVLF 1513
[Close]
BLAST of SMED30003362 vs. TrEMBL
Match: A0A5N3X7Q6 (Uncharacterized protein (Fragment) OS=Muntiacus reevesi OX=9886 GN=FD755_019171 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.647e-17
Identity = 175/918 (19.06%), Postives = 355/918 (38.67%), Query Frame = 1 
Query: 2245 SYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKIT---RFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI--------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLY-------GLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRND----IISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVL--FSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSL-QYRHNSFV-----INDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGR--PVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYF 4887
            +  F Q D+ +G VRY+S +D     + T   V L + V  + +  +T  V + +  V+  R   L  + ++ +   L+  +L    E EA       +  + +   P  G +     G +++    F+  +L+ G++ Y       +   +++   F V       S      +YI  +  P   +L    +  P G     ++A++L++ + N  S+++ ++  P+ G+ +        + +  F+ +D++ G L Y  +N E  ED   F +  + G    D   E     F +  +  N+  P +      +V+     +L+   + F+D DS    A  V+   ++         S +   E     + FT  +L   ++ F + G     +   + DG+    ++  V     Y        LV+P   +  I       D+  + +  +  + S  +  ++ +TS P +G         LLR D      + QD+L+  ++Y            D + F ++    +    ++V I             IE   AP  L R + +  F  +  +I  R LL   +       IV+++   P+ G L    H++       ++ + RFSQ  +  GR+ Y       R  V                  +D FS  + + + A +   R ++E     + +      V +   +TL    +++   ++          +L  LH +++  P+ G +   +  +   +  F ++++++  I Y+H G+   L D F ++A  +    Q+  ++    T+ +L       I L +   +  W  + V I    L    D+D+            +D+VY ++  SNG V         + SFTQ  ++  L+ F
Sbjct:  695 TQAFHQRDVEQGRVRYLS-TDPQHHAEDTVESVALEVQVGQEALSNLTFPVTVQRATVRLLRLEPL--HTQNTQQEALTTAHLEATLE-EAGPHP--TTFLYEVVQAPRKGNLQL--QGTRLSDGQSFTQDDLRAGRVTYGA--TARDSEAVEDAFHFRVTAPP-HFSPLYTFPIYIGGD--PDAPVLTNVLLSVPEGGEGV-LSADHLFVKSLNSASYLYEVMERPRHGRLVWRDAQDKATMVTSFTNEDLLHGRLVYQHDNSETTEDDIPF-VATRQGEGSSDMAWEEVRGVFRVAIQPVNDHAPVQTISRVFHVARGGQRLLTTDDVAFSDADSGFADAQLVLTRKDLL------FGSIVAVDEPSRPIYRFTQEDLRNRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGTI-------DTAVLPLDTNLDIRSG-DEVHYQVTSGPRWG--------QLLRADQPVTSFTQQDLLERAILYSHNGSLS---PRDTLAFSVEAGPVHTEATLQVTIA------------IEGPLAPLHLVRHKKIYVFQGEAAEI-RRDLLEAAQEAVPPADIVFSVKTPPSAGYLVMLSHDAVAAEPPSLDPVHRFSQEAVDAGRVLY----LHSRPEVW-----------------SDTFSLDVSSGLGAPLEGVRVELEVLPAAIPLEAQNFSVPEGGARTLAPPLLRVAGPYF---------PTLPSLHLQLLEPPRHGALQREEGPQDGSLSAFSWREVEQQLIRYVHDGS-ETLADSFVLVANASEMDRQSHPVV---FTITILPVNDQPPI-LTTNTGLQMWEETTVPIPAEALTGT-DSDSG----------PEDLVYTLERPSNGRVVLSTAPSTEIHSFTQAQLDGGLVLF 1513
[Close]
BLAST of SMED30003362 vs. TrEMBL
Match: H0VKI2 (Chondroitin sulfate proteoglycan 4 OS=Cavia porcellus OX=10141 GN=CSPG4 PE=4 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.671e-16
Identity = 194/1008 (19.25%), Postives = 395/1008 (39.19%), Query Frame = 1 
Query: 2002 GNQTSKSFVLSLIPRSSLSINIRN-TGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLXXXXXXXXXXXEVFNSGTKT---WKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDL---ILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKITR---FSVAELKMGKIFYVC----QKNIHNLFLLK--EQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI--------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNV-------NVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVL--FSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSL----QYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRP----VQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQ-INSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYF 4887
            G Q S   +L+++     +I IR+ TG+  +  S   ILP++L +   N     +  L           ++   +G      W  +  F Q D+ +G VRY+S +D     Q T   + L + V  + +  ++  V + +  V     W L    L+ ++ +   L+  +L    E EA    A +S  + +  VP  G +     G +++    FS  +L+ G++ Y       K I + FL +      F+ +Y            V+I  +  P   +L    +L P G     ++A++L++ + N  S+++ ++  P+ G+          + +  F+ +D++ G L Y  ++ E  ED   F  T +   S    ++E    F +  +  N+  P +      +V      +L+   + F+D DS  + A  V+   ++         S +   E     + FT  +L + ++ F + G     +   + DG+    ++  V       +V N   LV+P      I       D+  + +  +  + S  ++ ++ +TS P +G L    +         S QD+L   ++Y            D +G  ++    +    ++V I  +  P            AP  L R + +  F  ++ +I +  L ++   +     IV+++   P+ G L         +  +  +  FSQ  +  G++ Y                     +   E +S D F+  + + +   +   R ++E     + +      V +   +TL    +++   ++          +L  L  +++  P+ G +   + G+P    +  F +++++  +I Y+H G+   L D F ++A  +    Q     S+P+T  V I     Q  +++    +  W  + V I    L A  D+D+            +D+VY ++  SNG V         V  F+Q  ++  L+ F
Sbjct:  646 GLQASGPAILNVVAMRP-AIRIRHSTGLLLAQGSAAPILPANLSVET-NAVGQDVSVLFRVVGALEFGELQKQGAGGAEGAEWWVTQAFHQRDVEQGRVRYLS-TDPRHHAQNTVENLVLEVQVGQETLSNLSFPVTIQRATV-----WMLQLEPLHTQTTQPETLTTAHLEATME-EAAGPRA-SSFHYEVVQVPRKGNLQL--QGTRLSAGQGFSQDDLRTGRVTYAATARTSKPIEDAFLFRVTAPPHFSPLYT---------FPVHIGGD--PDAPVLTNVLLLVPEGGEAV-LSADHLFVKSLNSTSYLYEVMELPRHGRLAWREPQDKATPVTSFTNEDLLHGRLLYQHDDSETTEDDIPFVATRQDEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTVSHVFHVVRGGRRLLTTEDVAFSDMDSGFSDAQLVLTRKDLL------FGSIVAVDEPSRPIYRFTQEDLRRRRVLFVHSGADHGWMQLQVSDGQHQATAMLEVQASEPFLHVANGSRLVVPQGGHGII-------DTAMLPLDTNLDIRSG-DDVHYRITSGPHWGQLLRASQP----ATTFSQQDLLDGTILYSHNGSLS---PRDSLGLWVEAGPVHTEATLQVTIALDSPP------------APLQLVRHEKIYVFQGEVAEIRQDQLEADQEGVPST-DIVFSVRSPPSSGYLVMMSHATAGAPSLAPVHSFSQEAIATGKVLY--------------------LHSHPEAWS-DTFTLDVASGLGTPLEGIRMELEVLPTTIPLEGQNFSVSEGGARTLAPPLLQVTGPYF---------PTLPSLSLRVLEPPQHGAL--QREGQPKDGVLDTFSWREVEEQQIRYVHDGS-EVLTDSFILVANASEMDRQ-----SQPVTFTVTILPINDQPPVLTTNMGLQLWEGATVPIPAEALRAT-DSDSG----------PEDLVYSIEQPSNGQVVLRAAPGTEVYHFSQAQLDTGLVLF 1546
[Close]
BLAST of SMED30003362 vs. TrEMBL
Match: A0A2K6PH01 (Chondroitin sulfate proteoglycan 4 OS=Rhinopithecus roxellana OX=61622 GN=CSPG4 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.265e-15
Identity = 169/919 (18.39%), Postives = 358/919 (38.96%), Query Frame = 1 
Query: 2236 WKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDL---ILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKIT---RFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKF--------ISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLN-----NYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVL--FSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFV------INDIRRFSQMDLLMGRIHY-NCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKI--FSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYF 4887
            W  +  F Q D+ +G VRY+S +D     + T   + L + V  +++  ++  V + +  V     W L    L+ ++ +   L+  +L    E    S    +   + +   P  G +     G +++    F+  +++ G++ Y           +++   F V       S      ++I  +  P   +L    ++ P G     ++A++L++ + N  S+++ ++  P+ G+          + +  F+ +D++ G L Y  ++ E  ED   F +  + G S  D   E     F +  +  N+  P +      +V+     +L+   + F+D DS    A  V+   ++         S +   E     + FT  +L K ++ F + G     +   + DG+    ++  V     Y L + +  R  + + +  + ++  ++   F+LD++L+       ++ +T+ P +G +    +         S QD+L   ++Y            D + F ++    +    ++V +             +E   AP  L R + +  F  +  +I  R  L   +       IV+++ K P+ G L       +      ++ ++ FSQ  +  GR+ Y + R   +                      +D FS  + + + A +   R D+E     + +      V +  + TL    +++   ++          +L  L  +++  P+ G +        R +  F ++++++  I Y+H G+   L D F +MA  +    Q+  +     TV VL       + L +   +  W  + V I    L +  D D+ +K          D+VY ++  SNG V         V+SFTQ  ++  L+ F
Sbjct:  641 WWATQAFHQRDVEQGRVRYLS-TDPQHRTKDTVENLALEVQVGQEILSNLSFPVTIQRATV-----WMLRLEPLHTQNTQQETLTTAHLEATLEEAGPSPPTFH---YEVVQAPRKGNLQL--QGTRLSDGQGFTQDDIQAGRVTYGATARASEA--VEDTFRFRVTAPPY-FSPLYTFPIHIGGD--PDAPVLTNVLLVVPEGGEGV-LSADHLFVKSLNSASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNEDLLHGRLVYQHDDSETTEDDIPF-VATRQGESSGDMAWEEVRGVFQVAIQPVNDHAPVQTISRVFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLL------FGSIVAVDEPTRPIYRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPY-LRVANGSR--LVVPQGGQGTIDTAV---FHLDTNLDIRSGDEVHYHITAGPRWGQVLRAGQP----ATAFSQQDLLDGAVLYSHNGSLS---PRDTLAFSVEAGPVHTDATLQVTVA------------LEGPLAPLKLVRHKKIYVFQGEAAEI-RRDQLEASQEAVPPADIVFSVKKPPSAGYLVMVSRGVLADEPPSLDPVQSFSQEAVDAGRVLYLHSRPEAW----------------------SDAFSLDVASGLGAPIEGVRVDLEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVAGPYF---------PTLPGLGLQVLEPPRHGALQKEDGPQARTLSAFSWREVEKQLIRYVHDGS-ETLTDSFVLMANASEMDRQSHPVA---FTVTVLPVNDQPPV-LTTNTGLQMWEGATVPIPAEVLRST-DGDSGSK----------DLVYTIEQPSNGRVVLRAAPGTEVRSFTQAQLDGGLVLF 1462
[Close]
BLAST of SMED30003362 vs. TrEMBL
Match: A0A2K6PGZ5 (Chondroitin sulfate proteoglycan 4 OS=Rhinopithecus roxellana OX=61622 GN=CSPG4 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.358e-15
Identity = 169/919 (18.39%), Postives = 358/919 (38.96%), Query Frame = 1 
Query: 2236 WKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDL---ILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKIT---RFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKF--------ISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDE-----FWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLN-----NYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVL--FSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFV------INDIRRFSQMDLLMGRIHY-NCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKI--FSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYF 4887
            W  +  F Q D+ +G VRY+S +D     + T   + L + V  +++  ++  V + +  V     W L    L+ ++ +   L+  +L    E    S    +   + +   P  G +     G +++    F+  +++ G++ Y           +++   F V       S      ++I  +  P   +L    ++ P G     ++A++L++ + N  S+++ ++  P+ G+          + +  F+ +D++ G L Y  ++ E  ED   F +  + G S  D   E     F +  +  N+  P +      +V+     +L+   + F+D DS    A  V+   ++         S +   E     + FT  +L K ++ F + G     +   + DG+    ++  V     Y L + +  R  + + +  + ++  ++   F+LD++L+       ++ +T+ P +G +    +         S QD+L   ++Y            D + F ++    +    ++V +             +E   AP  L R + +  F  +  +I  R  L   +       IV+++ K P+ G L       +      ++ ++ FSQ  +  GR+ Y + R   +                      +D FS  + + + A +   R D+E     + +      V +  + TL    +++   ++          +L  L  +++  P+ G +        R +  F ++++++  I Y+H G+   L D F +MA  +    Q+  +     TV VL       + L +   +  W  + V I    L +  D D+ +K          D+VY ++  SNG V         V+SFTQ  ++  L+ F
Sbjct:  677 WWATQAFHQRDVEQGRVRYLS-TDPQHRTKDTVENLALEVQVGQEILSNLSFPVTIQRATV-----WMLRLEPLHTQNTQQETLTTAHLEATLEEAGPSPPTFH---YEVVQAPRKGNLQL--QGTRLSDGQGFTQDDIQAGRVTYGATARASEA--VEDTFRFRVTAPPY-FSPLYTFPIHIGGD--PDAPVLTNVLLVVPEGGEGV-LSADHLFVKSLNSASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNEDLLHGRLVYQHDDSETTEDDIPF-VATRQGESSGDMAWEEVRGVFQVAIQPVNDHAPVQTISRVFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLL------FGSIVAVDEPTRPIYRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPY-LRVANGSR--LVVPQGGQGTIDTAV---FHLDTNLDIRSGDEVHYHITAGPRWGQVLRAGQP----ATAFSQQDLLDGAVLYSHNGSLS---PRDTLAFSVEAGPVHTDATLQVTVA------------LEGPLAPLKLVRHKKIYVFQGEAAEI-RRDQLEASQEAVPPADIVFSVKKPPSAGYLVMVSRGVLADEPPSLDPVQSFSQEAVDAGRVLYLHSRPEAW----------------------SDAFSLDVASGLGAPIEGVRVDLEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVAGPYF---------PTLPGLGLQVLEPPRHGALQKEDGPQARTLSAFSWREVEKQLIRYVHDGS-ETLTDSFVLMANASEMDRQSHPVA---FTVTVLPVNDQPPV-LTTNTGLQMWEGATVPIPAEVLRST-DGDSGSK----------DLVYTIEQPSNGRVVLRAAPGTEVRSFTQAQLDGGLVLF 1498
[Close]
BLAST of SMED30003362 vs. Ensembl Cavefish
Match: cntnap5l (contactin-associated protein-like 5 [Source:NCBI gene;Acc:103034882])

HSP 1 Score: 56.9954 bits (136), Expect = 3.392e-7
Identity = 83/395 (21.01%), Postives = 157/395 (39.75%), Query Frame = 1 
Query:  208 IGFDFLTGNTDATIIHLQSIDVNGNYIGISLRDSHLIIEIFLDHVSYFTN-------ITGLFNDGKWHTMNIKERRDKISVVLDNSLSASIILKVPKSLK---EFMFSYIRIAGKFPKDFYR--YRGCIRNLISHSTDLLESVNNSMVMFEMVEMIWNCHKESFTSNWKIPFSLQSYKSAVSFKIKKSLKPLFILQFDFKVTRANFPLFRLANGRYNLSFDLL----PSYVYIKSSNPPYQKTVPFSSY-----GHWNTIIVVISHFQMNVSINSH---FVFIAKISLEDMSKFSL----------DIGSESRNIKFGKESALSDSAI--GCIRNLFINYRPYALAD------AGFVIAVITGCSQIFGCLFSPCPFNGKCSYSFTNSVICHCSA 1266
            I   F +   +  ++H +     G+YI + L+   L + + LD     ++       +  L +D  WH++ I+    +++  +D             SL+   E  F  I + GK P  F R  + GC+ NL  +  ++++           V  +     ES  +   +  S  SY +  +     +      ++F F+    N  LF +A  R   S  L+       +++    PP Q +   S+      G W++++V +   Q+ ++++S    F+ IA+++ E + + ++          D+ SE R  +          A+  GC+R +FIN +P  L          F       CS    C+ + C   G C  S+ N   C+CS 
Sbjct:  198 ISLRFRSRQAEGVLVHGEG--QRGDYITLELQRGRLALHLNLDDTKPQSSSRPTSVMLGSLLDDHLWHSVLIERFNKQVNFTVDRDTQHFRTQGQEDSLEVDYELSFGGIPLPGK-PGTFLRENFHGCLENLYYNGVNIIDMAKRRKPQIYTVGNVTFSCSESQPAAVTLLNSTGSYLALPADPASAAAGDGLTVRFQFRTWTQNGRLFSVALTRGPDSASLILQISEGILHLSLREPP-QTSAQISAGQSVCDGQWHSLVVEVKGQQVYLTVDSQKPVFMEIARLT-ESLQRTTVFLGGCPVLQNDLASEGRCTR--------PRAVYQGCLRLIFINNQPVNLGRIQQEKPENFSQISFDICSIRDRCVPNFCEHGGVCYQSWDN-FYCNCSG 578
[Close]
BLAST of SMED30003362 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002585.1 (pep scaffold:Pmarinus_7.0:GL481746:2011:14999:-1 gene:ENSPMAG00000002348.1 transcript:ENSPMAT00000002585.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 85.1149 bits (209), Expect = 1.927e-16
Identity = 215/1050 (20.48%), Postives = 396/1050 (37.71%), Query Frame = 1 
Query: 2002 GNQTSKSFVLSLIPRSSLSINIRNTGISCSPF-SKTFILPSHLLIRIPNVRSSKIVFLLXXXXXXXXXXXEVFNSGTKTWKRSYMFSQSDINRGFVRY-ISDSDNTFWLQLTYTYVDLSILVHAKLVEK---ITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKIT---RFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFI-----------SNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDEFWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESR-HSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNV-------NVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVLFSNDLTQIS-ERYLLSECRLINEKHQIVYNITKSPNHGSL---------QYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDG---LLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFS-SKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQI-NSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVT---RINQSLLNVQSFTQQDINENLIYFIDTALVN---QFQKSTLQRILFNQILAFPKWIFIISLSVTHGM 5007
            G + S + VL L+          NTGIS S       IL ++L +R  N     +    S + +     I+        W+R+  F+Q  + R  V Y +SD  N     +T  +    + V  K++E+     + V   KL+V + R  +L    R+     L+QK L    E    S DA   I + +  +P  G +  G    K+T    F+  +++ G + Y+ ++   +   +++ + F+V+ + LK SK       I  +    ++      ++   G     I    L++   N  +F + I   P+ GK              N+  F+ +DI+   L Y  ++ E  EDRF F  T         F D F +  + RN+  P +     + V      +L+   + + D D     A  V     I        +  L+  +    R + F   +L + ++ F +RG         + DG+  + ++  V        V+N  GL++      AI    NL     + ++          +  F +T  P +G L  LL  H   +   + +D+   R +Y    G+   G+ D   F ++     E   ++V        +      +E+   P  + R   L   +   +S     L     ++   ++V+ + + P HG L         + ++   +   +  F+Q+D+ + R+ Y                G+ A          D FS  +   + A +      ++    L+ +   G   L V +  +  L    +    + +F  R L F +S           PK G++    + G  +  F  + ++R  + Y+H G+ +  DD F ++A     V       S+PM V V +     +  +++  Q+   W  S   I++  L A  D D             +++ Y +   SNG V    R NQ +LN   FTQ D++   + F      +    FQ +        QI +      I+S+ V +G+
Sbjct:  685 GEKVSNTVVLRLLAIPGEFGMENNTGISVSALEGSALILTANLSVRT-NAADQDVEIQYSITELPKYGEIQRLYESNGRWRRAESFTQRAMERKHVSYALSDGANIAAAGVTDRF-RFKVSVFGKVLEEPQEFAIRVSPAKLKVANNRPLELDKVERAH----LTQKNLQTRVEGAKVS-DA--DIKYDIITLPAKGHLYLGDV--KLTANASFTQRDVRSGSVSYLLKERAKSD--MEDTVWFHVLAQRLK-SKLHSFRFTIKADSEAIEVTNNGLSVIEGEGK---LITKNELFLETLNTQNFRYQITQSPRHGKLKKINLSDSADSNDNVTTFTNEDIVNKRLMYIHDDSETGEDRFTFSATPTDLNFSSAFNDAFNVTVQLRNDEKPARMVDRVLRVVRNGHKLLTLSDLAYYDADVDSDDAALVYTRRGI-------PNGELVAADDPSKRLYQFRQGDLAERRVLFAHRGADQGRFVLWVSDGKHQVTALLEVVASEPYARVNNGTGLLVRRGHTQAIAA-ANLSVDTNVDVRDE-------GDVTFRVTESPRHGRL--LLDGHPAES--FTRRDLQTGRAMYRHDGGH--GGLRDSFRFAVELRGHGEGAGMRVEGSLSIRIF------LESHEKPPAVVRNASLVVGEEEPVSIGSASLQVTHEVSPPAELVFTVREPPRHGFLRRLVANGEEEEQYEGSLAQQLEAFTQLDVNLNRVQY-----------VHTSPGQLA----------DSFSLDVGNGVSAPLPALLVAVDVLPRLIPLRLPGGGVLAVREGGSAAL----LVAADSPHFARRQLEFRVS---------EPPKHGRVEGVDQPGVALAAFTSRQVERELVYYVHDGSET-RDDNFTLVA-----VDDELHKRSKPMVVPVAVSAVNDEPPVVAANQVLKVWVGSVTEITSADLRA-EDKDTP----------PEELAYSISPPSNGLVALRERPNQPVLN---FTQADVDSGSLVFAHRGATSGGFNFQVTDGVNFAARQIFSITAKPLILSVEVNNGL 1636
[Close]
BLAST of SMED30003362 vs. Ensembl Nematostella
Match: EDO40454 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S788])

HSP 1 Score: 51.2174 bits (121), Expect = 6.375e-6
Identity = 100/468 (21.37%), Postives = 189/468 (40.38%), Query Frame = 1 
Query: 3550 LDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISL-----QDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIV--TEFIPYDQNNHLIETDCAPTTLKRFQVLFSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDD---------KFEIMAYLNPRVSQASSI-ISEPMTVKVLIKQKTRQI---KLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSAS-NGFVTRINQSLLNVQSFTQQDINENLIYFI 4890
            LDS  +N  +++ S P  G L  + +   L+   +SL     Q  L+ R++   +D   I    D   F + +  +    ++  V V  T+ +P             P+ + R   L       I+  YL +   L ++   + Y +T+ P  G L+  ++  +  ++R FSQ+++   ++ Y                     +  +E  + D F F++     +S+       +F   L+ + N   +V   A +T     V I     F  R  + + S   L F +   P  G +   K G P Q F   D+ +N + YLH G+ + LDD          ++     N + +Q +++ IS  +T    +  +  Q+   K +   Q+ +  +  V I+   L A  D D+ N           ++VY V +   NGF+TR   +   +  FTQ  ++ + +Y++
Sbjct: 1225 LDSPDDNLTYIIRSTPRAGVLQRMRRDGTLQK--LSLWGTFTQLDLRRRVIVYTQDP-SIQTERDSFRFDITDGSNTLLNQVFYVFVRATDRLP-------------PSVISREVKLNQGSRVLITTDYL-TASDLQSDNTNLRYKLTRLPTQGHLELLNSPGI--EVRTFSQLEVASNKLMY--------------------VHSSEEEIAGDSFDFEVSDGASSSVTR-----KFMITLLDVNNKKPVVTSQALKTREGGDVVITS---FELRADDRDTSPENLRFTVTRVPLHGTLL--KHGTPCQDFTQDDINKNHVKYLHDGSDTTLDDFLVTITDGAHYDYFLLPNTKTTQRTALRISIHITP---VDNRLPQLVYNKGVRDLQVLATGKRGVRITGDTLRA-EDPDSNNT----------ELVYKVDTPPLNGFLTRDPATNKLLSKFTQGSLDRDGVYYV 1629
[Close]
BLAST of SMED30003362 vs. Planmine SMEST
Match: SMESG000003005.1 (SMESG000003005.1)

HSP 1 Score: 3233.74 bits (8383), Expect = 0.000e+0
Identity = 1613/1616 (99.81%), Postives = 1614/1616 (99.88%), Query Frame = 1 
Query:   61 MVFDCWXXXXXXXXXXXXXXXXXQIAREISLNGNGYLTIEYGVNLDSINIGFDFLTGNTDATIIHLQSIDVNGNYIGISLRDSHLIIEIFLDHVSYFTNITGLFNDGKWHTMNIKERRDKISVVLDNSLSASIILKVPKSLKEFMFSYIRIAGKFPKDFYRYRGCIRNLISHSTDLLESVNNSMVMFEMVEMIWNCHKESFTSNWKIPFSLQSYKSAVSFKIKKSLKPLFILQFDFKVTRANFPLFRLANGRYNLSFDLLPSYVYIKSSNPPYQKTVPFSSYGHWNTIIVVISHFQMNVSINSHFVFIAKISLEDMSKFSLDIGSESRNIKFGKESALSDSAIGCIRNLFINYRPYALADAGFVIAVITGCSQIFGCLFSPCPFNGKCSYSFTNSVICHCSANLCLPNLQVIDSQFLPFTVPDLVILQYSTIASKPIPLFLHYNLTVFLSIYDKSSLIMSKLPIHSDIDLLTYQRDSQLKPLLTNRFTVEDVIKKRIFCCQFQFKQLSKSFSIYFVIYLNSSKAESLNFIPHQAILNGIYLEVRIKYFNATMRLPLKLPAGRIVLFDPPRIVVDDKIVLSDLQVNPYVIFNPFPTEHSCGEFIFTYNNSIETVSDKIPLKLKYETFLTRNVYFQTTKQCDFQIWAVKGNQTSKSFVLSLIPRSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLXXXXXXXXXXXEVFNSGTKTWKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKITRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDEFWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVLFSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYFIDTALVN 4908
            MVFDCWILHLPLLLGFILSLIPLQIAREISLNGNGYLTIEYGVNLDSINIGFDFLTGNTDATIIHLQSIDVNGNYIGISLRDSHLIIEIFLDHVSYFTNITGLFNDGKWHTMNIKERRDKISVVLDNSLSASIILKVPKSLKEFMFSYIRIAGKFPKDFYRYRGCIRNLISHSTDLLESVNNSMVMFEMVEMIWNCHKESFTSNWKIPFSLQSYKSAVSFKIKKSLKPLFILQFDFKVTRANFPLFRLANGRYNLSFDLLPSYVYIKSSNPPYQKTVPFSSYGHWNTIIVVISHFQMNVSINSHFVFIAKISLEDMSKFSLDIGSESRNIKFGKESALSDSAIGCIRNLFINYRPYALADAGFVIAVITGCSQIFGCLFSPCPFNGKCSYSFTNSVICHCSANLCLPNLQVIDSQFLPFTVPDLVILQYSTIASKPIPLFLHYNLTVFLSIYDKSSLIMSKLPIHSDIDLLTYQRDSQLKPLLTNRFTVEDVIKKRIFCCQFQFKQLSKSFSIYFVIYLNSSKAESLNFIPHQAILNGIYLEVRIKYFNATMRLPLKLPAGRIVLFDPPRIVVDDKIVLSDLQVNPYVIFNPFPTEHSCGEFIFTYNNSIETVSDKIPLKLKYETFLTRNVYFQTTKQCDFQIWAVKGNQTSKSFVLSLIPRSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLSNSSIKNKNNIEVFNSGTKTWKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKITRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDEFWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVLFSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYFIDT  +N
Sbjct:    1 MVFDCWILHLPLLLGFILSLIPLQIAREISLNGNGYLTIEYGVNLDSINIGFDFLTGNTDATIIHLQSIDVNGNYIGISLRDSHLIIEIFLDHVSYFTNITGLFNDGKWHTMNIKERRDKISVVLDNSLSASIILKVPKSLKEFMFSYIRIAGKFPKDFYRYRGCIRNLISHSTDLLESVNNSMVMFEMVEMIWNCHKESFTSNWKIPFSLQSYKSAVSFKIKKSLKPLFILQFDFKVTRANFPLFRLANGRYNLSFDLLPSYVYIKSSNPPYQKTVPFSSYGHWNTIIVVISHFQMNVSINSHFVFIAKISLEDMSKFSLDIGSESRNIKFGKESALSDSAIGCIRNLFINYRPYALADAGFVIAVITGCSQIFGCLFSPCPFNGKCSYSFTNSVICHCSANLCLPNLQVIDSQFLPFTVPDLVILQYSTIASKPIPLFLHYNLTVFLSIYDKSSLIMSKLPIHSDIDLLTYQRDSQLKPLLTNRFTVEDVIKKRIFCCQFQFKQLSKSFSIYFVIYLNSSKAESLNFIPHQAILNGIYLEVRIKYFNATMRLPLKLPAGRIVLFDPPRIVVDDKIVLSDLQVNPYVIFNPFPTEHSCGEFIFTYNNSIETVSDKIPLKLKYETFLTRNVYFQTTKQCDFQIWAVKGNQTSKSFVLSLIPRSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSKIVFLLSNSSIKNKNNIEVFNSGTKTWKRSYMFSQSDINRGFVRYISDSDNTFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRSKRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKITRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINVYIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILVHPKFGKFISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSRVDFFDEFWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSKGTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFRNRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNLKDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISLQDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIPYDQNNHLIETDCAPTTLKRFQVLFSNDLTQISERYLLSECRLINEKHQIVYNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSVADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLMTNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNPKKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNPRVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLYAIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQDINENLIYFIDTGNIN 1616

HSP 2 Score: 1353.96 bits (3503), Expect = 0.000e+0
Identity = 740/754 (98.14%), Postives = 743/754 (98.54%), Query Frame = 3 
Query: 4848 FHPTRY--Q*EFDL-FHRYSACQSISEKHLTTNIVQPNSGLPKMDIYYKLIRNPRHGTVNKKVFNKKSKRIHLRTIHKNGNFSQNDIKNKLICFIIFPGSDFGRFHDTVHLMILTDSRIIHRNNFISFELFIRPEXXXXXXXXXXXXGLSWVVMRNETLFLTVDRFRFKSFVENILHNNMFVLILKPCYGQLSFNGVPMKTGSVFFLNDIIQKHVAYRAFDANSIYPVTDTVEIQMSPNASYVKLKNKSQNIHLSFILISPSKILSINFPCVKHSQKLLSLSLFENITAICAKLYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPNSDSDMVGLRIYHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVMVSSNHIKIATNLLSERDDFYVSLDLLPLYGNIYLDHIPVSGFKYSHILEGRVLYVQSDMMRSTDRFDISLSLASRNQKIXXXXXXXXXXXXXXXXXXXXXMIGAKLIITSQHINSESLIRCSNSYVLFTIQNKFFHYGEMSKEKFPGDITFTNHDIQFQRLIYESFSFFHRENDDLIPRNPKSILMEEIVLAXXXXXXXXXXXXXXXTFRIQIIPKDYMKRHLKFSPGKNEKQEEIQKGIWITSYFSLPFLCXXXXXXXXXXXXXXXXWYCVRYQNVNRAHLLYQLLSSFPGSGKKSDEPLRASVQSIEHSVPMFANRFFIDSGNENLQLEESSPLETKFNSPTITVGIEIERINIRPTSA 7100
            F+P ++    EFD      SACQSISEKHLTTNIVQPNSGLPKMDIYYKLIRNPRHGTVNKKVFNKKSKRIHLRTIHKNGNFSQNDIKNKLICFIIFPGSDFGRFHDTVHLMILTDSRIIHRNNFISFELFIRPENINHFNQNIFFFGLSWVVMRNETLFLTVDRFRFKSFVENILHNNMFVLILKPCYGQLSFNGVPMKTGSVFFLNDIIQKHVAYRAFDANSIYPVTDTVEIQMSPNASYVKLKNKSQNIHLSFILISPSKILSINFPCVKHSQKLLSLSLFENITAICAKLYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPNSDSDMVGLRIYHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVMVSSNHIKIATNLLSERDDFYVSLDLLPLYGNIYLDHIPVSGFKYSHILEGRVLYVQSDMMRSTDRFDISLSLASRNQKISNSVSVGVTVVPRVKVTTAVVMIGAKLIITSQHINSESLIRCSNSYVLFTIQNKFFHYGEMSKEKFPGDITFTNHDIQFQRLIYESFSFFHRENDDLIPRNPKSILMEEIVLAVSTPNSSVPVQPSVVTFRIQIIPKDYMKRHLKFSPGKNEKQEEIQKGIWITSYFSLPFLCLISLSVILVILLVVAVWYCVRYQNVNRAHLLYQLLSSFPGSGKKSDEPLRASVQSIEHSVPMFANRFFIDSGNENLQLEESSPLETKFNSPTITVGIEIERINIRPTSA
Sbjct: 1647 FYPIKFSIHKEFDFQVSSISACQSISEKHLTTNIVQPNSGLPKMDIYYKLIRNPRHGTVNKKVFNKKSKRIHLRTIHKNGNFSQNDIKNKLICFIIFPGSDFGRFHDTVHLMILTDSRIIHRNNFISFELFIRPENINHFNQNIFFFGLSWVVMRNETLFLTVDRFRFKSFVENILHNNMFVLILKPCYGQLSFNGVPMKTGSVFFLNDIIQKHVAYRAFDANSIYPVTDTVEIQMSPNASYVKLKNKSQNIHLSFILISPSKILSINFPCVKHSQKLLSLSLFENITAICAKLYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPNSDSDMVGLRIYHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVMVSSNHIKIATNLLSERDDFYVSLDLLPLYGNIYLDHIPVSGFKYSHILEGRVLYVQSDMMRSTDRFDISLSLASRNQKISNSVSVGVTVVPRVKVTTAVVMIGAKLIITSQHINSESLIRCSNSYVLFTIQNKFFHYGEMSKEKFPGDITFTNHDIQFQRLIYESFSFFHRENDDLIPRNPKSILMEEIVLAVSTPNSSVPVQPSVVTFRIQIIPKDYMKRHLKFSPGKNEKQEEIQKGIWITSYFSLPFLCLISLSVILVILLVVAVWYCVRYQNVNRAHLLYQLLSSFPGSGKKSDEPLRASVQSIEHSVPMFANRFFIDSGNENLQLEESSPLETKFNSPTITVGIEIERINIRPTSA 2400
The following BLAST results are available for this feature:
BLAST of SMED30003362 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
FREM22.585e-727.95FRAS1 related extracellular matrix 2 [Source:HGNC ... [more]
FREM13.789e-620.32FRAS1 related extracellular matrix 1 [Source:HGNC ... [more]
FREM13.789e-620.32FRAS1 related extracellular matrix 1 [Source:HGNC ... [more]
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BLAST of SMED30003362 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Cspg44.247e-1119.94chondroitin sulfate proteoglycan 4 [Source:MGI Sym... [more]
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BLAST of SMED30003362 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q8VHY0|CSPG4_MOUSE2.971e-1019.94Chondroitin sulfate proteoglycan 4 OS=Mus musculus... [more]
sp|Q5SZK8|FREM2_HUMAN1.241e-627.95FRAS1-related extracellular matrix protein 2 OS=Ho... [more]
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BLAST of SMED30003362 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5N3VC491.415e-1819.13Uncharacterized protein (Fragment) OS=Muntiacus mu... [more]
A0A5N3X7Q61.647e-1719.06Uncharacterized protein (Fragment) OS=Muntiacus re... [more]
H0VKI22.671e-1619.25Chondroitin sulfate proteoglycan 4 OS=Cavia porcel... [more]
A0A2K6PH011.265e-1518.39Chondroitin sulfate proteoglycan 4 OS=Rhinopithecu... [more]
A0A2K6PGZ51.358e-1518.39Chondroitin sulfate proteoglycan 4 OS=Rhinopithecu... [more]
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BLAST of SMED30003362 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
cntnap5l3.392e-721.01contactin-associated protein-like 5 [Source:NCBI g... [more]
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BLAST of SMED30003362 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000002585.11.927e-1620.48pep scaffold:Pmarinus_7.0:GL481746:2011:14999:-1 g... [more]
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BLAST of SMED30003362 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO404546.375e-621.37Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30003362 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30003362 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000003005.10.000e+099.81SMESG000003005.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30003362 ID=SMED30003362|Name=SMED30003362|organism=Schmidtea mediterranea sexual|type=transcript|length=7100bp
CATAATTAAAACTTGATATTTCATGGGATTTTAGTTAAAGTTATTGATAA
TAAACAATTTATGGTTTTTGATTGCTGGATACTTCACCTACCGCTGTTGT
TAGGATTTATTTTGTCACTGATCCCATTACAGATTGCTAGAGAAATCTCT
CTCAATGGAAATGGTTATTTGACAATCGAGTATGGGGTGAACTTGGATTC
AATCAATATCGGATTTGACTTCCTGACTGGAAATACCGATGCGACAATCA
TTCATTTGCAATCCATAGATGTGAATGGTAATTACATTGGAATATCACTA
CGCGATTCACATCTCATCATTGAGATATTCCTGGACCATGTTTCCTACTT
CACAAATATCACGGGGTTATTTAACGATGGTAAATGGCATACAATGAATA
TCAAAGAACGTCGTGACAAAATCTCTGTGGTTTTGGACAATTCTTTATCT
GCATCTATTATTCTCAAAGTTCCAAAATCCCTCAAAGAATTCATGTTCAG
TTATATTAGAATTGCTGGTAAGTTTCCAAAGGATTTCTACCGATATCGCG
GATGCATTCGGAACCTCATATCTCATAGTACTGACTTATTAGAATCGGTA
AATAACTCGATGGTGATGTTTGAAATGGTTGAGATGATTTGGAATTGCCA
CAAAGAGAGCTTCACAAGCAACTGGAAGATTCCATTCTCACTCCAATCTT
ATAAATCAGCTGTTTCCTTTAAAATTAAAAAATCTCTTAAACCCCTTTTC
ATTTTACAATTCGATTTTAAAGTAACTCGGGCGAATTTCCCTTTATTTCG
GTTAGCTAATGGACGATATAATCTATCATTTGATTTGTTACCGTCCTATG
TCTATATCAAATCTTCAAATCCTCCTTACCAAAAAACGGTCCCGTTTTCT
TCATATGGCCATTGGAACACAATCATTGTTGTAATTTCTCACTTTCAGAT
GAACGTTTCAATCAATTCACATTTTGTTTTTATAGCAAAGATTTCCTTGG
AAGACATGTCTAAATTCTCACTTGATATTGGAAGTGAAAGTCGAAATATC
AAATTTGGTAAAGAATCCGCCTTATCTGATTCGGCAATTGGTTGTATACG
AAACCTGTTCATCAATTACCGTCCGTATGCACTAGCCGATGCCGGCTTTG
TCATAGCAGTTATTACTGGATGTTCACAGATATTTGGATGTTTATTTTCA
CCTTGTCCATTTAATGGGAAATGTTCTTATTCATTTACGAATTCTGTTAT
CTGCCACTGCTCTGCCAACCTCTGTTTACCAAACCTTCAAGTAATTGATT
CGCAATTCTTACCTTTCACGGTCCCGGACCTGGTGATCTTGCAATATTCG
ACCATAGCTTCAAAACCAATACCTTTATTTTTGCATTATAATTTGACTGT
TTTCTTATCAATATATGACAAAAGCTCATTGATAATGTCTAAGCTTCCAA
TTCATTCAGACATAGATTTATTAACATATCAAAGAGATTCCCAGTTAAAG
CCTCTCCTGACAAATCGTTTTACAGTGGAAGATGTTATTAAAAAGAGAAT
TTTCTGTTGCCAATTTCAGTTTAAACAACTTTCAAAAAGTTTTTCAATTT
ATTTTGTCATTTATCTTAACTCTTCAAAAGCCGAATCTCTCAACTTTATT
CCTCACCAGGCGATATTAAATGGGATTTATTTGGAGGTGAGAATCAAATA
TTTCAATGCCACAATGCGCCTGCCGTTGAAATTGCCCGCGGGAAGAATAG
TGTTATTTGATCCTCCAAGAATTGTCGTCGATGATAAAATTGTTCTCTCA
GACCTTCAAGTCAATCCTTATGTTATATTTAACCCATTTCCCACAGAACA
TTCTTGTGGAGAATTTATTTTTACATATAATAATTCCATAGAAACGGTTA
GTGATAAAATTCCATTGAAACTGAAATACGAAACTTTTCTGACGAGGAAC
GTTTATTTCCAAACTACCAAGCAATGTGATTTTCAAATTTGGGCAGTAAA
AGGCAACCAAACATCAAAAAGCTTTGTCTTATCCCTCATTCCGAGGTCTA
GCTTATCAATTAATATCAGAAATACCGGAATATCCTGTTCACCGTTTTCA
AAGACTTTTATTTTACCCTCTCATTTGTTGATTCGAATTCCAAATGTCAG
ATCTTCGAAAATCGTCTTTCTGTTGTCGAATTCCAGTATTAAAAATAAAA
ATAATATCGAAGTGTTCAATAGTGGAACTAAAACTTGGAAAAGGTCTTAC
ATGTTCTCTCAGTCCGATATTAACCGAGGCTTTGTTAGATATATTTCCGA
TTCTGATAATACATTTTGGCTCCAACTCACCTATACGTATGTTGATTTGT
CAATTCTTGTCCATGCAAAGCTCGTCGAGAAAATTACCCTACTCGTTCAA
ATGACTAAATTAGAGGTGAAATCCTTTCGTAATTGGGATCTGATTTTGAA
TATGAGATCTAAGAGATTTGTGAAACTTTCTCAGAAGTATTTAAACGTAG
CCTTTGAGTTTGAAGCCTACTCTTTAGACGCATTGAATAGTATTTGGTTC
TCTTTGAAAAACGTTCCTTTTCATGGATTCATATCGTACGGAGCAAGTGG
GAGAAAGATCACTAGATTCAGTGTAGCAGAATTGAAAATGGGAAAGATTT
TCTACGTATGTCAAAAAAATATTCATAATCTCTTTCTGCTGAAGGAACAA
CTGGAGTTCAATGTCGTTTATAAATCTTTAAAATTATCAAAGGGTATATG
GATTAATGTCTACATAGCTTACAATGACATACCTTCCGACCTCATACTCC
AGAAATATCCAATATTGACCCCTAACGGAACAAACTTTTACAAAATAAAT
GCAGAAAATCTATGGATAAGTGCTGACAATTGTCATTCGTTTATGTTTTC
TATTCTAGTGCATCCGAAATTTGGAAAATTTATTTCGAATCTCAAACAGT
TCTCCAAACAAGATATTATTGAAGGGGTTTTGACTTATCACCGTGAAAAT
CTTGAGATCGTTGAGGATAGATTCATTTTCCATTTGACTTGTAAAAGCGG
ATTATCTCGAGTTGATTTTTTTGATGAGTTCTGGATGAAATTTGAGGAGC
GAAATAATTTTCCACCTGAAAAGAATTCTTTGGAAAATATTTATGTTTCA
TACGAAATTTCGGATATTTTATCTCCCGGTTTGATACGATTCAATGATCG
CGATTCTAAAGGTACTTTTGCTTATGAGGTAATTTGTAATTCAAACATAT
TCCCTCCCTGTCCTTGCCATTCGGATTCGGGCCTCATTTACCACGAAAGC
GGAGAAAGTCGTCACAGTTTCACTAATGTTGAGTTAGGGAAATTTCAAAT
TCGCTTCCGCAACCGGGGGCTAATATCAGAAAATCTGTGCTTTCTCATTT
TTGATGGAAGGTTCAACATGATTTCGATATCAAACGTAAATGTGGATAAT
TTATATGGACTCGTCATTCCATCTTATCAAAGATTTGCCATTTATATCCG
AAAGAATTTAAAAGATTCAGTTTTCATCTCCATCAAGTGCAGTTTCTATT
TGGATTCCTCTTTAAATAATTACTATTTTGTTTTAACGAGTCTACCCGAA
TACGGAAATCTTTATTCTCTATTGAAAAAGCATCTACTTCGAAACGATAT
TATATCCCTTCAGGACATCCTTCAAATGAGAATGGTGTATGAACTGAAAG
ATGGATATAGAATAGATGGAGTTGAAGACCAAGTAGGATTTCAAATGAAA
AACACTATGGATAACGAATTCAAAGAGATAAAAGTGGTTATCGTTACTGA
ATTCATACCATATGATCAGAATAATCATCTTATCGAGACAGACTGTGCAC
CAACTACATTAAAGAGGTTCCAAGTATTGTTCTCCAATGATCTGACCCAA
ATCAGTGAGCGTTACCTTCTATCTGAGTGCCGACTGATAAATGAAAAGCA
TCAAATTGTTTATAATATTACAAAATCTCCTAATCACGGATCGCTACAAT
ACCGTCATAATTCGTTTGTCATAAATGACATTAGAAGATTTTCTCAAATG
GACTTGCTAATGGGGAGAATCCATTACAACTGCAGAATTTGCAAATATCG
CAAATCGGTAGCTGATGATGATATAGGAAAATTTGCATCATATCAAGGGG
ATGAAGGATTCTCAAATGATCAATTTTCTTTTCAGTTGGAAACTTCAATG
AAAGCTTCAATGAGAGAATGGAGATTCGATATTGAATTTACTTCTGTTCT
GGTACTAATGACGAATGATGGATTGCTCGTATACCAAAATGCCAATCAAA
CTTTAAATAACATCAAAGTCAAAATTTATCAGAACTTTTATTTTCATAAT
AGAAACCTTAATTTCAACATTTCCCTATCACTTCTGCATTTCAAAATTAT
CTCCAATCCAAAGAAAGGAAAAATATTTTCAAGCAAATTAGGAAGACCAG
TTCAAATGTTTCCTTACCAAGACATGAAACGCAACGAGATTCTGTATTTG
CATCAAGGAAATCTGTCTGATCTTGACGACAAATTTGAAATAATGGCATA
TCTGAATCCCCGGGTCAGTCAGGCAAGTTCTATAATCAGTGAACCAATGA
CGGTCAAAGTTTTAATCAAACAGAAAACCAGGCAAATAAAACTGATTTCA
TTAAAACAAATTAATTCATGGGCCCGTTCAAAGGTGGCCATCTCTAACCG
TCATTTATATGCAATATTTGATAATGATAACTGTAACAAAAAAGTTTCCA
AATGCGTCCAGGATACTGACGACATCGTTTATCTGGTAAAGAGTGCTTCA
AACGGATTCGTTACCAGGATCAATCAGTCATTATTAAATGTTCAAAGTTT
CACCCAACAAGATATCAATGAGAATTTGATCTATTTCATCGATACAGCGC
TTGTCAATCAATTTCAGAAAAGCACCTTACAACGAATATTGTTCAACCAA
ATTCTGGCCTTCCCAAAATGGATATTTATTATAAGCTTATCCGTAACCCA
CGGCATGGTACAGTCAATAAAAAGGTATTTAATAAAAAAAGTAAAAGAAT
ACATTTAAGAACCATTCATAAAAATGGTAATTTCTCTCAAAACGATATAA
AAAACAAATTAATCTGCTTCATAATATTTCCTGGATCCGATTTCGGTCGT
TTTCATGATACGGTCCATTTGATGATACTGACAGATTCCAGAATCATTCA
CAGGAACAATTTTATTAGTTTCGAACTATTTATTCGCCCTGAAAACATAA
ATCATTTTAATCAAAACATTTTCTTTTTTGGACTTTCTTGGGTTGTCATG
AGAAATGAAACTCTTTTCCTCACTGTTGATAGATTTCGTTTTAAATCTTT
TGTCGAAAATATTCTCCACAATAACATGTTCGTGCTGATTCTAAAGCCTT
GCTATGGACAACTTTCATTCAATGGGGTTCCCATGAAAACAGGTTCTGTC
TTCTTTCTAAATGACATTATACAAAAACATGTTGCCTATAGAGCCTTTGA
TGCCAATTCAATATATCCGGTCACTGATACCGTTGAAATCCAAATGTCAC
CAAACGCTAGCTATGTTAAACTGAAAAATAAAAGTCAGAATATTCATTTA
TCTTTTATTTTAATTTCTCCGTCTAAAATTTTGTCTATAAACTTCCCATG
TGTCAAGCATTCTCAGAAACTCCTCTCGTTGTCTTTATTTGAGAATATTA
CTGCAATTTGTGCAAAACTCTATTTCAAGATCACCAAGGGTCCCAATAAT
GGTAGAATGATCGTGAAATCTGGTTCAAGAAGAACGATCATATCGGAACA
TCCAGTTCTCATAAGATGCTCAGAAATTAAAAGCGGATTGGTGTATTACA
GAAATATTAGTCCAAATTCGGATTCAGATATGGTTGGTCTGAGAATATAT
CATGTTGATTTGTTATCTTATGTCCATGATATTTCTGTGGCAATAAAGCT
GATGCCTTTTAAAGTGGTAATTACCCCAAAACCTATCGGCATTCTCCAGT
GTGAATGTTTCGTCATGGTCAGTTCAAATCATATTAAAATAGCCACCAAT
TTATTGTCAGAACGTGACGATTTCTATGTTTCTCTGGATTTGTTGCCCCT
ATATGGAAATATTTATTTAGACCATATTCCTGTGTCGGGATTCAAATATT
CCCACATTCTAGAGGGTAGAGTGCTCTATGTTCAATCAGACATGATGCGT
TCGACAGACAGATTTGACATTTCTCTTTCTCTAGCTTCCAGAAATCAGAA
AATAAGTAATTCAGTTTCTGTAGGGGTCACTGTTGTTCCTCGGGTAAAGG
TTACGACTGCAGTTGTTATGATCGGAGCCAAATTGATAATTACATCACAA
CATATAAATAGTGAATCCCTTATTCGATGTTCGAATAGTTACGTGTTATT
TACCATTCAAAACAAGTTCTTCCATTATGGTGAAATGTCGAAAGAAAAGT
TTCCTGGGGATATTACATTCACGAATCATGACATTCAATTTCAGAGATTA
ATTTATGAATCCTTCAGTTTTTTCCATAGGGAAAATGATGATCTAATACC
TAGAAACCCTAAATCTATTTTGATGGAGGAAATCGTTCTTGCCGTCTCAA
CTCCAAATTCATCCGTTCCAGTTCAGCCATCAGTTGTAACGTTTCGTATT
CAAATCATTCCAAAGGATTACATGAAAAGGCATTTGAAATTTTCACCGGG
GAAGAATGAAAAACAAGAAGAAATTCAAAAAGGCATTTGGATTACAAGTT
ATTTTAGCCTTCCATTTCTGTGTTTAATTTCTTTATCAGTCATTTTGGTA
ATATTGTTAGTTGTGGCAGTCTGGTATTGTGTAAGATATCAAAATGTAAA
TAGAGCGCATTTGTTATATCAGCTTCTTTCGTCGTTTCCGGGTTCCGGGA
AGAAATCCGATGAACCTTTAAGGGCAAGCGTTCAGTCAATTGAGCACTCC
GTTCCGATGTTCGCCAATCGATTCTTCATCGATTCAGGAAATGAAAATCT
TCAATTGGAGGAATCAAGTCCTTTGGAAACCAAATTCAACAGCCCCACGA
TAACAGTTGGAATAGAGATTGAACGTATCAACATAAGACCAACATCGGCT
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protein sequence of SMED30003362-orf-1

>SMED30003362-orf-1 ID=SMED30003362-orf-1|Name=SMED30003362-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1666bp
MVFDCWILHLPLLLGFILSLIPLQIAREISLNGNGYLTIEYGVNLDSINI
GFDFLTGNTDATIIHLQSIDVNGNYIGISLRDSHLIIEIFLDHVSYFTNI
TGLFNDGKWHTMNIKERRDKISVVLDNSLSASIILKVPKSLKEFMFSYIR
IAGKFPKDFYRYRGCIRNLISHSTDLLESVNNSMVMFEMVEMIWNCHKES
FTSNWKIPFSLQSYKSAVSFKIKKSLKPLFILQFDFKVTRANFPLFRLAN
GRYNLSFDLLPSYVYIKSSNPPYQKTVPFSSYGHWNTIIVVISHFQMNVS
INSHFVFIAKISLEDMSKFSLDIGSESRNIKFGKESALSDSAIGCIRNLF
INYRPYALADAGFVIAVITGCSQIFGCLFSPCPFNGKCSYSFTNSVICHC
SANLCLPNLQVIDSQFLPFTVPDLVILQYSTIASKPIPLFLHYNLTVFLS
IYDKSSLIMSKLPIHSDIDLLTYQRDSQLKPLLTNRFTVEDVIKKRIFCC
QFQFKQLSKSFSIYFVIYLNSSKAESLNFIPHQAILNGIYLEVRIKYFNA
TMRLPLKLPAGRIVLFDPPRIVVDDKIVLSDLQVNPYVIFNPFPTEHSCG
EFIFTYNNSIETVSDKIPLKLKYETFLTRNVYFQTTKQCDFQIWAVKGNQ
TSKSFVLSLIPRSSLSINIRNTGISCSPFSKTFILPSHLLIRIPNVRSSK
IVFLLSNSSIKNKNNIEVFNSGTKTWKRSYMFSQSDINRGFVRYISDSDN
TFWLQLTYTYVDLSILVHAKLVEKITLLVQMTKLEVKSFRNWDLILNMRS
KRFVKLSQKYLNVAFEFEAYSLDALNSIWFSLKNVPFHGFISYGASGRKI
TRFSVAELKMGKIFYVCQKNIHNLFLLKEQLEFNVVYKSLKLSKGIWINV
YIAYNDIPSDLILQKYPILTPNGTNFYKINAENLWISADNCHSFMFSILV
HPKFGKFISNLKQFSKQDIIEGVLTYHRENLEIVEDRFIFHLTCKSGLSR
VDFFDEFWMKFEERNNFPPEKNSLENIYVSYEISDILSPGLIRFNDRDSK
GTFAYEVICNSNIFPPCPCHSDSGLIYHESGESRHSFTNVELGKFQIRFR
NRGLISENLCFLIFDGRFNMISISNVNVDNLYGLVIPSYQRFAIYIRKNL
KDSVFISIKCSFYLDSSLNNYYFVLTSLPEYGNLYSLLKKHLLRNDIISL
QDILQMRMVYELKDGYRIDGVEDQVGFQMKNTMDNEFKEIKVVIVTEFIP
YDQNNHLIETDCAPTTLKRFQVLFSNDLTQISERYLLSECRLINEKHQIV
YNITKSPNHGSLQYRHNSFVINDIRRFSQMDLLMGRIHYNCRICKYRKSV
ADDDIGKFASYQGDEGFSNDQFSFQLETSMKASMREWRFDIEFTSVLVLM
TNDGLLVYQNANQTLNNIKVKIYQNFYFHNRNLNFNISLSLLHFKIISNP
KKGKIFSSKLGRPVQMFPYQDMKRNEILYLHQGNLSDLDDKFEIMAYLNP
RVSQASSIISEPMTVKVLIKQKTRQIKLISLKQINSWARSKVAISNRHLY
AIFDNDNCNKKVSKCVQDTDDIVYLVKSASNGFVTRINQSLLNVQSFTQQ
DINENLIYFIDTALVNQFQKSTLQRILFNQILAFPKWIFIISLSVTHGMV
QSIKRYLIKKVKEYI*
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protein sequence of SMED30003362-orf-2

>SMED30003362-orf-2 ID=SMED30003362-orf-2|Name=SMED30003362-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=711bp
MDIYYKLIRNPRHGTVNKKVFNKKSKRIHLRTIHKNGNFSQNDIKNKLIC
FIIFPGSDFGRFHDTVHLMILTDSRIIHRNNFISFELFIRPENINHFNQN
IFFFGLSWVVMRNETLFLTVDRFRFKSFVENILHNNMFVLILKPCYGQLS
FNGVPMKTGSVFFLNDIIQKHVAYRAFDANSIYPVTDTVEIQMSPNASYV
KLKNKSQNIHLSFILISPSKILSINFPCVKHSQKLLSLSLFENITAICAK
LYFKITKGPNNGRMIVKSGSRRTIISEHPVLIRCSEIKSGLVYYRNISPN
SDSDMVGLRIYHVDLLSYVHDISVAIKLMPFKVVITPKPIGILQCECFVM
VSSNHIKIATNLLSERDDFYVSLDLLPLYGNIYLDHIPVSGFKYSHILEG
RVLYVQSDMMRSTDRFDISLSLASRNQKISNSVSVGVTVVPRVKVTTAVV
MIGAKLIITSQHINSESLIRCSNSYVLFTIQNKFFHYGEMSKEKFPGDIT
FTNHDIQFQRLIYESFSFFHRENDDLIPRNPKSILMEEIVLAVSTPNSSV
PVQPSVVTFRIQIIPKDYMKRHLKFSPGKNEKQEEIQKGIWITSYFSLPF
LCLISLSVILVILLVVAVWYCVRYQNVNRAHLLYQLLSSFPGSGKKSDEP
LRASVQSIEHSVPMFANRFFIDSGNENLQLEESSPLETKFNSPTITVGIE
IERINIRPTSA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR013320ConA-like_dom_sf
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 46..174
e-value: 1.8E-6
score: 37.5
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 26..196
score: 18.691
NoneNo IPR availablePFAMPF16184Cadherin_3coord: 1510..1613
e-value: 8.4E-7
score: 29.0
NoneNo IPR availableGENE3DG3DSA:2.60.120.200coord: 24..175
e-value: 1.5E-14
score: 55.9
NoneNo IPR availableGENE3DG3DSA:2.60.120.200coord: 191..362
e-value: 4.5E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR15036FAMILY NOT NAMEDcoord: 638..994
NoneNo IPR availablePANTHERPTHR15036FAMILY NOT NAMEDcoord: 1444..1611
NoneNo IPR availablePANTHERPTHR15036:SF17CHONDROITIN SULFATE PROTEOGLYCAN 4coord: 1444..1611
NoneNo IPR availablePANTHERPTHR15036:SF17CHONDROITIN SULFATE PROTEOGLYCAN 4coord: 638..994
NoneNo IPR availableCDDcd00110LamGcoord: 29..169
e-value: 2.15086E-11
score: 61.6653
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.825
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILYSSF49899Concanavalin A-like lectins/glucanasescoord: 28..172
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILYSSF49899Concanavalin A-like lectins/glucanasescoord: 208..371