Reticulocalbin

Overview
NameReticulocalbin
Smed IDSMED30003044
Length (bp)588
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Reticulocalbin (SMED30003044) t-SNE clustered cells

Violin plots show distribution of expression levels for Reticulocalbin (SMED30003044) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30003044

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 15

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30003044SMESG000077405.1 dd_Smed_v4_5905_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30003044SMESG000077405.1 dd_Smed_v4_5905_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30003044SMESG000077405.1 dd_Smed_v4_5905_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig17263newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig17263uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig31304newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig31304uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig30821newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30003044SMESG000077405.1 Contig30821uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
gutSMED30003044SMESG000077405.1 SMED30003044smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
epidermisSMED30003044SMESG000077405.1 SMED30003044smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30003044SMESG000077405.1 SMED30003044smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
Category 2 cellSMED30003044SMESG000077405.1 dd_Smed_v6_5905_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30003044SMESG000077405.1 dd_Smed_v6_5905_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Category 3 cellSMED30003044SMESG000077405.1 dd_Smed_v6_5905_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Reticulocalbin vs. Ensembl Human
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 56.9954 bits (136), Expect = 4.393e-10
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:   41 DLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 147
[Close]
BLAST of Reticulocalbin vs. Ensembl Human
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 57.3806 bits (137), Expect = 2.202e-9
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Human
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 56.9954 bits (136), Expect = 2.279e-9
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  217 DLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 323
[Close]
BLAST of Reticulocalbin vs. Ensembl Human
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 56.9954 bits (136), Expect = 2.378e-9
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Human
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 56.9954 bits (136), Expect = 2.414e-9
Identity = 27/86 (31.40%), Postives = 52/86 (60.47%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  238 VKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 323
[Close]
BLAST of Reticulocalbin vs. Ensembl Fly
Match: scf (gene:FBgn0025682 transcript:FBtr0089941)

HSP 1 Score: 63.5438 bits (153), Expect = 1.877e-12
Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            + +E   F    D++KDG L+ EE+++W  P  ++  E E KH++   D D ++ L+K E+L+KY++F+ S+ +D  +    H+E 
Sbjct:  107 VANEREAFSTHRDLDKDGYLNEEEVKQWIAPHDFDHSEAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 192
[Close]
BLAST of Reticulocalbin vs. Ensembl Fly
Match: scf (gene:FBgn0025682 transcript:FBtr0089942)

HSP 1 Score: 63.5438 bits (153), Expect = 6.929e-12
Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            + +E   F    D++KDG L+ EE+++W  P  ++  E E KH++   D D ++ L+K E+L+KY++F+ S+ +D  +    H+E 
Sbjct:  244 VANEREAFSTHRDLDKDGYLNEEEVKQWIAPHDFDHSEAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
[Close]
BLAST of Reticulocalbin vs. Ensembl Zebrafish
Match: calua (calumenin a [Source:NCBI gene;Acc:415241])

HSP 1 Score: 63.929 bits (154), Expect = 7.188e-12
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE   W LPA Y+  E E KH++   D +++  L+K E+LNKY++F+ S+ +D  +  + H+E 
Sbjct:  235 EREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF 317
[Close]
BLAST of Reticulocalbin vs. Ensembl Zebrafish
Match: calua (calumenin a [Source:NCBI gene;Acc:415241])

HSP 1 Score: 63.929 bits (154), Expect = 7.188e-12
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE   W LPA Y+  E E KH++   D +++  L+K E+LNKY++F+ S+ +D  +  + H+E 
Sbjct:  235 EREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF 317
[Close]
BLAST of Reticulocalbin vs. Ensembl Zebrafish
Match: calub (calumenin b [Source:NCBI gene;Acc:394057])

HSP 1 Score: 63.1586 bits (152), Expect = 1.092e-11
Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F    D NKDG +D +E + W LPA Y+  E E KH++   D D++  L+K E+++KY++F+ S+ +D     + H+E 
Sbjct:  230 VKTEREQFTEFRDKNKDGRMDKDETRDWILPADYDHAEAEAKHLLYESDADKDGRLTKQEIVDKYDLFVGSQATDFGDALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Zebrafish
Match: rcn1 (reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33])

HSP 1 Score: 62.3882 bits (150), Expect = 2.038e-11
Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            +  E   F +  D+NKDG +D EEI+ W LP  Y+  + E +H++   D D++++LSK E+L  +N+F+ S+ ++  +  T  H+EL
Sbjct:  234 VRTERDQFSDFRDLNKDGKMDLEEIRHWILPQDYDHAQAEARHLVYESDTDKDQMLSKEEILENWNMFVGSQATNYGEDLTRNHDEL 320
[Close]
BLAST of Reticulocalbin vs. Ensembl Zebrafish
Match: calub (calumenin b [Source:NCBI gene;Acc:394057])

HSP 1 Score: 61.2326 bits (147), Expect = 5.289e-11
Identity = 28/75 (37.33%), Postives = 47/75 (62.67%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSD 482
            ++ E   F    D NKDG +D +E + W LPA Y+  E E KH++   D D++  L+K E+++KY++F+ S+ +D
Sbjct:  230 VKTEREQFTEFRDKNKDGRMDKDETRDWILPADYDHAEAEAKHLLYESDADKDGRLTKQEIVDKYDLFVGSQATD 304
[Close]
BLAST of Reticulocalbin vs. Ensembl Xenopus
Match: fgf11 (fibroblast growth factor 11 [Source:Xenbase;Acc:XB-GENE-479522])

HSP 1 Score: 62.003 bits (149), Expect = 4.825e-11
Identity = 34/103 (33.01%), Postives = 64/103 (62.14%), Query Frame = 3 
Query:  213 LAEIFS-DMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            +A++FS +  + +   +  E   F +  DINKDG +D EEI+ W LP  Y+  + E +H++   D+D++++L+K E+L  +N+F+ S+ ++  +  T  H+EL
Sbjct:  219 IADMFSHEEGQPEPDWVATEREQFADFRDINKDGKMDKEEIRHWILPQDYDHAQAEARHLIYESDLDKDKVLTKEEVLQNWNMFVGSQATNYGEDLTRNHDEL 321
[Close]
BLAST of Reticulocalbin vs. Ensembl Xenopus
Match: rcn3 (reticulocalbin 3 [Source:NCBI gene;Acc:395023])

HSP 1 Score: 55.8398 bits (133), Expect = 6.947e-9
Identity = 27/74 (36.49%), Postives = 46/74 (62.16%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS 479
            ++ E   F +  DINKDG +D  EI +W LP  Y+  + E KH++   D D++  L+K E+L+ +N+F+ S+ +
Sbjct:  237 VKTERQQFTDFRDINKDGKMDRTEISQWILPHDYDHADLEAKHLVYESDKDKDGKLTKKEILDNWNMFVGSQAT 310
[Close]
BLAST of Reticulocalbin vs. Ensembl Xenopus
Match: rcn3 (reticulocalbin 3 [Source:NCBI gene;Acc:395023])

HSP 1 Score: 55.4546 bits (132), Expect = 7.822e-9
Identity = 27/74 (36.49%), Postives = 46/74 (62.16%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS 479
            ++ E   F +  DINKDG +D  EI +W LP  Y+  + E KH++   D D++  L+K E+L+ +N+F+ S+ +
Sbjct:  235 VKTERQQFTDFRDINKDGKMDRTEISQWILPHDYDHADLEAKHLVYESDKDKDGKLTKKEILDNWNMFVGSQAT 308
[Close]
BLAST of Reticulocalbin vs. Ensembl Xenopus
Match: calu (calumenin [Source:NCBI gene;Acc:407965])

HSP 1 Score: 54.6842 bits (130), Expect = 1.337e-8
Identity = 26/86 (30.23%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F    D N DG +D EE + W LP+ Y+  E E +H++   D +++  L++ E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  230 VKTEREQFVEFRDKNHDGKMDKEETKDWILPSDYDHAEAESRHLVYESDQNKDSKLTREEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Xenopus
Match: calu (calumenin [Source:NCBI gene;Acc:407965])

HSP 1 Score: 54.6842 bits (130), Expect = 1.389e-8
Identity = 24/74 (32.43%), Postives = 47/74 (63.51%), Query Frame = 3 
Query:  294 DINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            D N DG +D EE + W LP+ Y+  E E +H++   D +++  L++ E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  242 DKNHDGKMDKEETKDWILPSDYDHAEAESRHLVYESDQNKDSKLTREEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Mouse
Match: Calu (calumenin [Source:MGI Symbol;Acc:MGI:1097158])

HSP 1 Score: 56.225 bits (134), Expect = 1.239e-10
Identity = 24/72 (33.33%), Postives = 47/72 (65.28%), Query Frame = 3 
Query:  300 NKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:    3 NRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 74
[Close]
BLAST of Reticulocalbin vs. Ensembl Mouse
Match: Calu (calumenin [Source:MGI Symbol;Acc:MGI:1097158])

HSP 1 Score: 56.9954 bits (136), Expect = 3.889e-10
Identity = 25/74 (33.78%), Postives = 48/74 (64.86%), Query Frame = 3 
Query:  294 DINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:   90 DKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 163
[Close]
BLAST of Reticulocalbin vs. Ensembl Mouse
Match: Rcn1 (reticulocalbin 1 [Source:MGI Symbol;Acc:MGI:104559])

HSP 1 Score: 58.5362 bits (140), Expect = 5.234e-10
Identity = 30/84 (35.71%), Postives = 54/84 (64.29%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            E   F +  D+NKDG LD +EI+ W LP  Y+  + E +H++   D +++E+L+K E+L+ +N+F+ S+ ++  +  T  H+EL
Sbjct:  242 EREQFNDFRDLNKDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEMLTKEEILDNWNMFVGSQATNYGEDLTKNHDEL 325
[Close]
BLAST of Reticulocalbin vs. Ensembl Mouse
Match: Calu (calumenin [Source:MGI Symbol;Acc:MGI:1097158])

HSP 1 Score: 57.3806 bits (137), Expect = 1.400e-9
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Mouse
Match: Calu (calumenin [Source:MGI Symbol;Acc:MGI:1097158])

HSP 1 Score: 57.3806 bits (137), Expect = 1.400e-9
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D +++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. UniProt/SwissProt
Match: sp|Q6IQP3|CALUA_DANRE (Calumenin-A OS=Danio rerio OX=7955 GN=calua PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.971e-11
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE   W LPA Y+  E E KH++   D +++  L+K E+LNKY++F+ S+ +D  +  + H+E 
Sbjct:  233 EREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. UniProt/SwissProt
Match: sp|Q7SXV9|CALUB_DANRE (Calumenin-B OS=Danio rerio OX=7955 GN=calub PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.195e-11
Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F    D NKDG +D +E + W LPA Y+  E E KH++   D D++  L+K E+++KY++F+ S+ +D     + H+E 
Sbjct:  230 VKTEREQFTEFRDKNKDGRMDKDETRDWILPADYDHAEAEAKHLLYESDADKDGRLTKQEIVDKYDLFVGSQATDFGDALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. UniProt/SwissProt
Match: sp|B5X186|CALUA_SALSA (Calumenin-A OS=Salmo salar OX=8030 GN=calua PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.819e-11
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE   W LP+ Y+  E E KH++   D +++  LSK E+LNKY++F+ S+ +D  +  + H+E 
Sbjct:  233 EREQFSEFRDKNKDGKMDREETMDWILPSDYDHAEAEAKHLVYESDSNKDGKLSKEEILNKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. UniProt/SwissProt
Match: sp|B5X4E0|CALUB_SALSA (Calumenin-B OS=Salmo salar OX=8030 GN=calub PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.605e-10
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE + W LP+ Y+  E E KH++   D D++  L+K E++ KY++F+ S+ +D  +    H+E 
Sbjct:  234 EREQFTEFRDTNKDGRMDKEETKDWILPSDYDHAEAEAKHLVYESDNDKDGKLTKAEIVEKYDLFVGSQATDFGEALARHDEF 316
[Close]
BLAST of Reticulocalbin vs. UniProt/SwissProt
Match: sp|O35783|CALU_RAT (Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.007e-9
Identity = 33/107 (30.84%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTL-----IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D        ++ E   F    D N+DG +D EE + W LP+ Y+  E E +H++   D D++  L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLEEYIGDMYSHDGNADEPQWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQDKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. TrEMBL
Match: A0A1I8IEK6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000851g2 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.122e-12
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E  TF N  D NKDG LD  EI  W +P  YN +E E +H+M   D D++  LS+ E+++KY++F+ S+ +D  +    HEEL
Sbjct:  245 VKTERETFSNVRDKNKDGRLDQAEIASWIVPEDYNHVEAETRHLMSQADTDKDGRLSRQEIMDKYDVFVGSQATDFGEALGRHEEL 330
[Close]
BLAST of Reticulocalbin vs. TrEMBL
Match: A0A1I8GA22 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000851g1 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.191e-12
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E  TF N  D NKDG LD  EI  W +P  YN +E E +H+M   D D++  LS+ E+++KY++F+ S+ +D  +    HEEL
Sbjct:  245 VKTERETFSNVRDKNKDGRLDQAEIASWIVPEDYNHVEAETRHLMSQADTDKDGRLSRQEIMDKYDVFVGSQATDFGEALGKHEEL 330
[Close]
BLAST of Reticulocalbin vs. TrEMBL
Match: A0A1I8FV93 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000851g3 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.252e-12
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E  TF N  D NKDG LD  EI  W +P  YN +E E +H+M   D D++  LS+ E+++KY++F+ S+ +D  +    HEEL
Sbjct:  245 VKTERETFSNVRDKNKDGRLDQAEIASWIVPEDYNHVEAETRHLMSQADTDKDGRLSRQEIMDKYDVFVGSQATDFGEALGRHEEL 330
[Close]
BLAST of Reticulocalbin vs. TrEMBL
Match: W6UDK3 (Calumenin-A OS=Echinococcus granulosus OX=6210 GN=EGR_06090 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.563e-12
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F+   D NKDG LD EEI  W  PA Y+ IE E+KH+M   D D++  LSK E+L+ Y++F+ S+ +D  +    H+EL
Sbjct:  153 EQQQFRETRDKNKDGYLDREEIHAWLFPADYDHIESELKHLMSETDDDQDGKLSKDEILSHYHVFIGSQATDFGQALYSHDEL 235
[Close]
BLAST of Reticulocalbin vs. TrEMBL
Match: A0A087W263 (Calumenin OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000245300 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.707e-12
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F+   D NKDG LD EEI+ W  PA Y+ IE E+KH+M   D D++  LSK E+L+ Y++F+ S+ +D  +    H+EL
Sbjct:  203 VKTEQQQFRETRDKNKDGYLDREEIRAWLFPADYDHIESELKHLMSETDDDQDGKLSKDEILSHYHVFIGSQATDFGQALYSHDEL 288
[Close]
BLAST of Reticulocalbin vs. Ensembl Cavefish
Match: calub (calumenin-B [Source:NCBI gene;Acc:103027690])

HSP 1 Score: 64.6994 bits (156), Expect = 2.609e-12
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  210 NLAEIFSDMKKVDRTLIEDE-----NSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E   DM   D    E E        F    D NKDG +D EE + W LP+ Y+  E E KH++   D D++ +L+K E+++KY++F+ S+ +D  +  + H+E 
Sbjct:  209 DLDEYIGDMYSQDGDPTEPEWVRTEREQFTEFRDKNKDGRMDKEETRDWILPSDYDHAEAEAKHLLYESDTDKDGMLTKQEIVDKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Cavefish
Match: calua (calumenin [Source:NCBI gene;Acc:103043492])

HSP 1 Score: 64.3142 bits (155), Expect = 4.549e-12
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            E   F    D NKDG +D EE   W LPA Y+  E E KH++   D +++  LSK E+LNKY++F+ S+ +D  +  + H+E 
Sbjct:  233 EREQFSEFRDKNKDGKMDKEETMDWILPADYDHAEAEAKHLVYESDSNKDGKLSKEEILNKYDLFVGSQATDFGEALVRHDEF 315
[Close]
BLAST of Reticulocalbin vs. Ensembl Cavefish
Match: rcn1 (reticulocalbin 1 [Source:NCBI gene;Acc:103039743])

HSP 1 Score: 61.2326 bits (147), Expect = 5.429e-11
Identity = 30/87 (34.48%), Postives = 55/87 (63.22%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            ++ E   F +  D+NKDG +D EEI+ W LP  Y+  + E +H++   D D++++L+K E+L  +N+F+ S+ ++  +  T  H+EL
Sbjct:  235 VKTERDQFSDFRDLNKDGKMDLEEIRHWILPQDYDHAQAEARHLLLESDTDKDQMLTKEEILENWNMFVGSQATNYGEDLTRNHDEL 321
[Close]
BLAST of Reticulocalbin vs. Ensembl Cavefish
Match: rcn3 (reticulocalbin 3 [Source:NCBI gene;Acc:103045651])

HSP 1 Score: 53.5286 bits (127), Expect = 2.129e-8
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 3 
Query:  267 ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            E   F    D+NKDG LD  E+ +W LP   +  + E KH++   D D ++ ++K E+L  +N+F+ S+ ++  +  T  H+EL
Sbjct:  230 EKKQFSEFRDVNKDGFLDASEVAQWILPGDVDHADIEAKHLIHETDRDNDDKMTKKEILENWNMFVGSQATNYGEDLTRKHDEL 313
[Close]
BLAST of Reticulocalbin vs. Ensembl Sea Lamprey
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 60.077 bits (144), Expect = 2.534e-11
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F +  D NKDG +D EE   W LP+ Y+  E E +H++   D D++  LSK E+L+K+++F+ S+ ++  +    H+E 
Sbjct:  232 VKTERQQFTDFRDTNKDGKMDKEETMAWILPSDYDHAEAEARHLIYESDSDKDGKLSKEEILDKHDLFVGSQATNFGEALTRHDEF 317
[Close]
BLAST of Reticulocalbin vs. Ensembl Sea Lamprey
Match: CALU (calumenin [Source:HGNC Symbol;Acc:HGNC:1458])

HSP 1 Score: 58.5362 bits (140), Expect = 5.030e-11
Identity = 27/86 (31.40%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +E E   F    D + DG++  +E+  W LP  Y++ E E KH++   D D++  L++ E++ KY++F+ S+ +D  +  + H+EL
Sbjct:  155 VESERKQFAELRDTDGDGLMGHDEVAAWILPDDYDQAEAESKHLIHECDDDQDGNLTREEIIAKYDLFVGSQATDFGEALMRHDEL 240
[Close]
BLAST of Reticulocalbin vs. Ensembl Sea Lamprey
Match: rcn2 (reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62])

HSP 1 Score: 48.9062 bits (115), Expect = 1.368e-7
Identity = 34/116 (29.31%), Postives = 57/116 (49.14%), Query Frame = 3 
Query:  201 NIYNLAEIFSDMKKVDRTLIED------ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLG-----HEEL 515
               +LAE   D  +   T   D      E   F ++ DI+ DG L+  E+  W +P +    E+E +H+++ +D D +  LS  E++    +FL S+++D  +  LG     HEEL
Sbjct:  115 GFVDLAEFLGDYHRDPSTPQSDPEWVITETDKFTSEFDIDHDGKLNPSELLSWLMPNNLEVAEDETEHLLEHMDTDGDGQLSHDEVVQNKELFLTSEVTDYGR-QLGEQYAHHEEL 229
[Close]
BLAST of Reticulocalbin vs. Ensembl Sea Lamprey
Match: rcn2 (reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62])

HSP 1 Score: 48.521 bits (114), Expect = 1.791e-7
Identity = 34/116 (29.31%), Postives = 57/116 (49.14%), Query Frame = 3 
Query:  201 NIYNLAEIFSDMKKVDRTLIED------ENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLG-----HEEL 515
               +LAE   D  +   T   D      E   F ++ DI+ DG L+  E+  W +P +    E+E +H+++ +D D +  LS  E++    +FL S+++D  +  LG     HEEL
Sbjct:  130 GFVDLAEFLGDYHRDPSTPQSDPEWVITETDKFTSEFDIDHDGKLNPSELLSWLMPNNLEVAEDETEHLLEHMDTDGDGQLSHDEVVQNKELFLTSEVTDYGR-QLGEQYAHHEEL 244
[Close]
BLAST of Reticulocalbin vs. Ensembl Nematostella
Match: EDO32638 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUH8])

HSP 1 Score: 56.6102 bits (135), Expect = 6.673e-10
Identity = 28/103 (27.18%), Postives = 59/103 (57.28%), Query Frame = 3 
Query:  213 LAEIFSDMKKVDRT--LIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            L +++ + +K D     ++ E   F    D N+DG +D +E++ W +PA ++ +  EV H++   DV+++  L+K+E+++K+ +F  S+ +D       H+E 
Sbjct:  230 LGDLYPESEKEDEEPDWVKTEREQFLTVRDKNRDGKMDKDEVRDWIVPADFDHVGAEVTHLINEADVNKDGYLTKSEIIDKHEVFAGSQATDFGDALTRHDEF 332
[Close]
BLAST of Reticulocalbin vs. Ensembl Nematostella
Match: EDO31169 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYP9])

HSP 1 Score: 48.521 bits (114), Expect = 3.916e-7
Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 3 
Query:  279 FQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS 479
            F NDLD +KDG L+ EE++ W  P S +    E +H+M  VD +++  L+  E++ +Y +F  S+ +
Sbjct:  194 FNNDLDKDKDGSLNKEELKSWIFP-SGSPSSGEAEHLMTEVDKNKDNFLTVDEIMERYELFAGSRAT 259
[Close]
BLAST of Reticulocalbin vs. Ensembl Nematostella
Match: EDO42789 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0S7])

HSP 1 Score: 48.521 bits (114), Expect = 4.077e-7
Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 3 
Query:  279 FQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKS 470
            F+   D NKDG LD +E++ W+ P ++NK  EE +H+++  D++ +  LS  E++  +  F  S
Sbjct:  191 FEEKHDQNKDGKLDLKEVEDWRRPKNFNKALEEAQHLIEHADLNGDGKLSADEIVTSHEFFAGS 254
[Close]
BLAST of Reticulocalbin vs. Ensembl Nematostella
Match: EDO35844 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKE6])

HSP 1 Score: 46.2098 bits (108), Expect = 2.162e-6
Identity = 26/76 (34.21%), Postives = 44/76 (57.89%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPAS-YNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSD 482
            ++DE + F  + D NKDG LD EE++ W LP + +    EE KH++   D + +  L+  E+   Y +F+ S+ +D
Sbjct:  223 VKDETNRFNEEYDKNKDGKLDKEEVRLWILPETDHLMAAEEAKHLVSSADDNSDGKLTIEEIEKNYAVFVGSEATD 298
[Close]
BLAST of Reticulocalbin vs. Ensembl Nematostella
Match: EDO34762 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SND1])

HSP 1 Score: 45.4394 bits (106), Expect = 3.768e-6
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSD 482
            +E E   F    D NKDG LD EE++ W LP     + +E KH++   D + +  L   E+L  +++F+ SK +D
Sbjct:  178 VEKEREDFAKQFDKNKDGKLDREEVRAWVLPEKGESL-DEAKHLIDGSDENADGDLQLDEILLHWDLFVGSKATD 251
[Close]
BLAST of Reticulocalbin vs. Ensembl Medaka
Match: calub (calumenin [Source:NCBI gene;Acc:101165303])

HSP 1 Score: 64.3142 bits (155), Expect = 3.888e-12
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            ++ E   F    D NKDG +D EE + W LP+ Y+  E E KH++   DVD++  L+K E+++KY++F+ S+ +D  +    H+E 
Sbjct:  233 VKTEREQFTEFRDKNKDGKMDKEETKDWILPSDYDHAEAEAKHLVYESDVDKDGRLTKAEIVDKYDLFVGSQATDFGEALTRHDEF 318
[Close]
BLAST of Reticulocalbin vs. Ensembl Medaka
Match: rcn1 (reticulocalbin 1 [Source:NCBI gene;Acc:101175141])

HSP 1 Score: 56.9954 bits (136), Expect = 1.401e-9
Identity = 28/87 (32.18%), Postives = 54/87 (62.07%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKP-TLGHEEL 515
            ++ E   F +  D+NKDG +D +EI+ W +P  Y+  + E +H++   D D+++ L+K E+L  +N+F+ S+ ++  +  T  H+EL
Sbjct:  266 VKTEREQFSDFRDLNKDGKMDKDEIRHWIMPQDYDHAQAEARHLVYESDQDKDQKLTKDEILENWNMFVGSQATNYGEDLTRSHDEL 352
[Close]
BLAST of Reticulocalbin vs. Ensembl Medaka
Match: rcn3 (reticulocalbin-1 [Source:NCBI gene;Acc:101175408])

HSP 1 Score: 52.373 bits (124), Expect = 4.942e-8
Identity = 24/74 (32.43%), Postives = 40/74 (54.05%), Query Frame = 3 
Query:  258 IEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS 479
            +  E   F    D NKDG LD  E+  W LP   +  + E KH++   D D++  ++K E+L  +N+F+ S+ +
Sbjct:  232 VHTEKKHFSEFRDSNKDGYLDAGEVAHWILPGEVDHADNEAKHLIHETDTDKDGKVTKKEILANWNMFVGSQAT 305
[Close]
BLAST of Reticulocalbin vs. Planmine SMEST
Match: SMESG000077405.1 (SMESG000077405.1)

HSP 1 Score: 201.445 bits (511), Expect = 9.972e-65
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 3 
Query:  213 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL
Sbjct:  187 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 287
[Close]
BLAST of Reticulocalbin vs. Planmine SMEST
Match: SMESG000077405.1 (SMESG000077405.1)

HSP 1 Score: 201.83 bits (512), Expect = 1.153e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 3 
Query:  213 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL
Sbjct:  202 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 302
[Close]
BLAST of Reticulocalbin vs. Planmine SMEST
Match: SMESG000077404.1 (SMESG000077404.1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.402e-21
Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 3 
Query:  213 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS-DEQKPTLGHEEL 515
            L ++F   ++     I +E   F  D D+NKDGVLD +EIQ W LP SYN++E E +H+M+L D +++ +LSK+EML+KY +F+ S+ S +   P   H++L
Sbjct:  194 LEDMFPQGREAKEEWIRNERQNFGIDRDLNKDGVLDRDEIQNWLLPDSYNRVESEAQHLMELADTNKDRILSKSEMLDKYQVFVGSRESVNYGGPDQSHDDL 295
[Close]
BLAST of Reticulocalbin vs. Planmine SMEST
Match: SMESG000077404.1 (SMESG000077404.1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.726e-21
Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 3 
Query:  213 LAEIFSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMS-DEQKPTLGHEEL 515
            L ++F   ++     I +E   F  D D+NKDGVLD +EIQ W LP SYN++E E +H+M+L D +++ +LSK+EML+KY +F+ S+ S +   P   H++L
Sbjct:  206 LEDMFPQGREAKEEWIRNERQNFGIDRDLNKDGVLDRDEIQNWLLPDSYNRVESEAQHLMELADTNKDRILSKSEMLDKYQVFVGSRESVNYGGPDQSHDDL 307
[Close]
BLAST of Reticulocalbin vs. Planmine SMEST
Match: SMESG000076911.1 (SMESG000076911.1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.312e-14
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 3 
Query:  210 NLAEIFSDM---KKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEEEVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL 515
            +L E  SD+    + + +L++ E  TF N  D N+D  LD  E+ +W +P  Y+ I+ E KH+M + D + ++ LS  E++  Y+ F+ S+++D    TLGHEEL
Sbjct:  209 DLNEYISDIWPNNRPEESLLKQEEDTFYNHRDKNQDKKLDETEVGEWLMPTGYDPIDAETKHLMHIADTNEDDQLSMEEIITHYDTFVGSQVTD--YGTLGHEEL 311
The following BLAST results are available for this feature:
BLAST of Reticulocalbin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CALU4.393e-1029.91calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
CALU2.202e-929.91calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
CALU2.279e-929.91calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
CALU2.378e-929.91calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
CALU2.414e-931.40calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
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BLAST of Reticulocalbin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Reticulocalbin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
scf1.877e-1232.56gene:FBgn0025682 transcript:FBtr0089941[more]
scf6.929e-1232.56gene:FBgn0025682 transcript:FBtr0089942[more]
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BLAST of Reticulocalbin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
calua7.188e-1238.55calumenin a [Source:NCBI gene;Acc:415241][more]
calua7.188e-1238.55calumenin a [Source:NCBI gene;Acc:415241][more]
calub1.092e-1134.88calumenin b [Source:NCBI gene;Acc:394057][more]
rcn12.038e-1135.63reticulocalbin 1, EF-hand calcium binding domain [... [more]
calub5.289e-1137.33calumenin b [Source:NCBI gene;Acc:394057][more]
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BLAST of Reticulocalbin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fgf114.825e-1133.01fibroblast growth factor 11 [Source:Xenbase;Acc:XB... [more]
rcn36.947e-936.49reticulocalbin 3 [Source:NCBI gene;Acc:395023][more]
rcn37.822e-936.49reticulocalbin 3 [Source:NCBI gene;Acc:395023][more]
calu1.337e-830.23calumenin [Source:NCBI gene;Acc:407965][more]
calu1.389e-832.43calumenin [Source:NCBI gene;Acc:407965][more]
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BLAST of Reticulocalbin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Calu1.239e-1033.33calumenin [Source:MGI Symbol;Acc:MGI:1097158][more]
Calu3.889e-1033.78calumenin [Source:MGI Symbol;Acc:MGI:1097158][more]
Rcn15.234e-1035.71reticulocalbin 1 [Source:MGI Symbol;Acc:MGI:104559... [more]
Calu1.400e-929.91calumenin [Source:MGI Symbol;Acc:MGI:1097158][more]
Calu1.400e-929.91calumenin [Source:MGI Symbol;Acc:MGI:1097158][more]
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BLAST of Reticulocalbin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6IQP3|CALUA_DANRE4.971e-1138.55Calumenin-A OS=Danio rerio OX=7955 GN=calua PE=2 S... [more]
sp|Q7SXV9|CALUB_DANRE7.195e-1134.88Calumenin-B OS=Danio rerio OX=7955 GN=calub PE=2 S... [more]
sp|B5X186|CALUA_SALSA9.819e-1138.55Calumenin-A OS=Salmo salar OX=8030 GN=calua PE=2 S... [more]
sp|B5X4E0|CALUB_SALSA4.605e-1036.14Calumenin-B OS=Salmo salar OX=8030 GN=calub PE=2 S... [more]
sp|O35783|CALU_RAT2.007e-930.84Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE... [more]
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BLAST of Reticulocalbin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8IEK61.122e-1240.70Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8GA221.191e-1240.70Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8FV931.252e-1240.70Uncharacterized protein OS=Macrostomum lignano OX=... [more]
W6UDK31.563e-1243.37Calumenin-A OS=Echinococcus granulosus OX=6210 GN=... [more]
A0A087W2631.707e-1241.86Calumenin OS=Echinococcus multilocularis OX=6211 G... [more]
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BLAST of Reticulocalbin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
calub2.609e-1233.64calumenin-B [Source:NCBI gene;Acc:103027690][more]
calua4.549e-1239.76calumenin [Source:NCBI gene;Acc:103043492][more]
rcn15.429e-1134.48reticulocalbin 1 [Source:NCBI gene;Acc:103039743][more]
rcn32.129e-833.33reticulocalbin 3 [Source:NCBI gene;Acc:103045651][more]
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BLAST of Reticulocalbin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4
Match NameE-valueIdentityDescription
CALU2.534e-1133.72calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
CALU5.030e-1131.40calumenin [Source:HGNC Symbol;Acc:HGNC:1458][more]
rcn21.368e-729.31reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-... [more]
rcn21.791e-729.31reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-... [more]
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BLAST of Reticulocalbin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Reticulocalbin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO326386.673e-1027.18Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO311693.916e-735.82Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO427894.077e-734.38Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO358442.162e-634.21Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO347623.768e-634.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Reticulocalbin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
calub3.888e-1236.05calumenin [Source:NCBI gene;Acc:101165303][more]
rcn11.401e-932.18reticulocalbin 1 [Source:NCBI gene;Acc:101175141][more]
rcn34.942e-832.43reticulocalbin-1 [Source:NCBI gene;Acc:101175408][more]
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BLAST of Reticulocalbin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000077405.19.972e-65100.00SMESG000077405.1[more]
SMESG000077405.11.153e-64100.00SMESG000077405.1[more]
SMESG000077404.13.402e-2142.16SMESG000077404.1[more]
SMESG000077404.13.726e-2142.16SMESG000077404.1[more]
SMESG000076911.14.312e-1436.19SMESG000076911.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30003044 ID=SMED30003044|Name=Reticulocalbin|organism=Schmidtea mediterranea sexual|type=transcript|length=588bp
CCGATCTATTTTTCAACTGCATTAAAGATAATAAAGCATTTTAAACTTTC
GAACACTAAAAGCAATACTAATGAATGGGACAAATAAACGAAATTAAACA
AATTTTTCAAAAAATGTTATATTTTATTTTTCTTGTAAATCAGGTTTTGT
GGATGAAAACAAAAATCTTTATTTACATTAAATTTACAATTTTTAGTGCT
AATATTTATAATCTAGCTGAAATATTTTCTGATATGAAGAAAGTTGACAG
AACACTTATTGAAGATGAAAACTCAACTTTTCAAAATGATTTAGATATAA
ATAAAGATGGAGTGTTAGATACAGAAGAAATTCAAAAATGGCAGCTTCCC
GCGAGTTATAATAAAATTGAAGAAGAAGTAAAACATATTATGAAACTAGT
AGATGTGGATCGTAATGAATTGTTAAGCAAAACAGAAATGTTGAACAAAT
ATAATATATTTTTAAAAAGTAAAATGTCTGATGAACAAAAGCCAACATTG
GGACATGAAGAACTTTAGCATTTCTCTAAATAAAAATCTAAATAAATGAA
AATCACATTGCATGTTGACATGTTTTATGGAATAATAA
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protein sequence of SMED30003044-orf-1

>SMED30003044-orf-1 ID=SMED30003044-orf-1|Name=SMED30003044-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=148bp
MGQINEIKQIFQKMLYFIFLVNQVLWMKTKIFIYIKFTIFSANIYNLAEI
FSDMKKVDRTLIEDENSTFQNDLDINKDGVLDTEEIQKWQLPASYNKIEE
EVKHIMKLVDVDRNELLSKTEMLNKYNIFLKSKMSDEQKPTLGHEEL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000028Category 2 cell
PLANA:0000034epidermis
PLANA:0000035Category 3 cell
PLANA:0002032epidermal cell
PLANA:0002142parenchyma
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
Vocabulary: molecular function
TermDefinition
GO:0005509calcium ion binding