GC-rich sequence DNA-binding factor 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002962 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Match: PAXBP1 (PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]) HSP 1 Score: 181.8 bits (460), Expect = 1.089e-46 Identity = 179/685 (26.13%), Postives = 318/685 (46.42%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAINKNIYQPREPKKVD---------------------WQLYTNENFENDKQSAVLM------ELNSISIDELSVGKLSELLMKRKEEIIDSK---YKNSQDVYIKQQTLMSNENKAISA-KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAI----------QSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKID-ILSELSSLIRFI---------NKFACS 2283 IPDAA I A+K+R++A++ F H ++E ++ A + D+ RI S RQ I + IE GSD D+ D+E + WE Q++K IN Q +P +V+ + Y + + ++ K + E+ ++ID L+ K+ ++ +DS +K ++ + K + +AI + + +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + ++ ++ + R RR + + +H EGLSSDDEE + I++ E ++I ++ ++F D + SI+ I +F + K+ YKDAYI L + +PLIRL+L+TW PL+ +F WF+ L+ F R + D D+ ++PTI +KVI+PKLT ++W+ S T+T +V KLI+ P+ N +N N + +KA++ R + +D+ +PLY + EN N + FFQ Q W+++K N + ++ I L +L+++G+LN YI L+ Y +D I K + FP+ W LK + +S+L + R++ N CS Sbjct: 219 IPDAAFIHAARKKRQMARELGDFTPH-----DNEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKS---QRQKIAEE-IGIE-GSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTID---------LVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESGKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLL-FYGCEEREQEKDDV------DVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYI---LMAFQNSEYGDDSIKKAQNVINCFPKQWFMN---LKGERTISQLENFCRYLVHLADTIYRNSIGCS 871
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Match: PAXBP1 (PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]) HSP 1 Score: 152.525 bits (384), Expect = 1.764e-37 Identity = 154/586 (26.28%), Postives = 275/586 (46.93%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAINKNIYQPREPKKVD---------------------WQLYTNENFENDKQSAVLM------ELNSISIDELSVGKLSELLMKRKEEIIDSK---YKNSQDVYIKQQTLMSNENKAISA-KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAI----------QSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIK 2016 IPDAA I A+K+R++A++ F H ++E ++ A + D+ RI S RQ I + IE GSD D+ D+E + WE Q++K IN Q +P +V+ + Y + + ++ K + E+ ++ID L+ K+ ++ +DS +K ++ + K + +AI + + +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + ++ ++ + R RR + + +H EGLSSDDEE + I++ E ++I ++ ++F D + SI+ I +F + K+ YKDAYI L + +PLIRL+L+TW PL+ +F WF+ L+ F R + D D+ ++PTI +KVI+PKLT ++W+ S T+T +V KLI+ P+ N +N N + +KA++ R + +D+ +PLY + EN N + FFQ Q W+++K Sbjct: 219 IPDAAFIHAARKKRQMARELGDFTPH-----DNEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKS---QRQKIAEE-IGIE-GSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTID---------LVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESGKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLL-FYGCEEREQEKDDV------DVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVK 778
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Match: GCFC2 (GC-rich sequence DNA-binding factor 2 [Source:HGNC Symbol;Acc:HGNC:1317]) HSP 1 Score: 136.346 bits (342), Expect = 2.588e-32 Identity = 161/644 (25.00%), Postives = 310/644 (48.14%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHG---INPDDSD-RIAMVGHSNSFEK---DRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQ---QTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQ--FDEIILSTKSSAIQSTFEMSNRAS-XXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNP--LQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKS 2301 IPDAA I A+++RELA+ Q S ++ H + I GM PDD + RI + + + + RN S E D ++++ WE +Q++KA+ I + R+ +D + +++ ++ I + + LL + + K QDV + Q L S+ N+A++ K + + K Y+ L++C +EK+ + +E + +++ +KR + +++ + + + + ++ F + + + + ESRR +R + R NH EG SSDDE P + + Q I ++F + ++C+I+ IL +F + +EKF Y +A+I+ + +L+PLIR++LI WNP L++ + WFK + +F S + D+ D K++ I +K IIP+LT++V +W+ LS ++T +L+ ++ + T N+ + + ++L+K+IV R + + +D+ IPLY + EN +F + Q W+ +K F N+++++ ++ + L +L L +LN Y+ L+ + DV+ K + PE W S ++ I +L + I+F+ +HK +S Sbjct: 134 IPDAAFIQAARRKRELARAQDDYISL-----DVQHTSSIS-GMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQED---EKQDTWEQQQMRKAV--KIIEERD---IDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALNCKF-----------YKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSS-----VEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGP---DVVKKCNQVAACLPEKWFENS-AMRTSI-PQLENFIQFL--LQSAHKLSRS 740
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Match: GCFC2 (GC-rich sequence DNA-binding factor 2 [Source:HGNC Symbol;Acc:HGNC:1317]) HSP 1 Score: 127.102 bits (318), Expect = 2.061e-29 Identity = 97/330 (29.39%), Postives = 178/330 (53.94%), Query Frame = 1 Query: 1324 NHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPL--QTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKS 2301 NH EG SSDDE P + + Q I ++F + ++C+I+ IL +F + +EKF Y +A+I+ + +L+PLIR++LI WNPL ++ + WFK + +F S + D+ D K++ I +K IIP+LT++V +W+ LS ++T +L+ ++ + T N+ + + ++L+K+IV R + + +D+ IPLY + EN +F + Q W+ +K F N+++++ ++ + L +L L +LN Y+ L+ + DV+ K + PE W S ++ I +L + I+F+ +HK +S Sbjct: 385 NHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSS-----VEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGP---DVVKKCNQVAACLPEKWFENS-AMRTSI-PQLENFIQFL--LQSAHKLSRS 702
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Match: GCFC2 (GC-rich sequence DNA-binding factor 2 [Source:HGNC Symbol;Acc:HGNC:1317]) HSP 1 Score: 65.0846 bits (157), Expect = 2.924e-11 Identity = 39/146 (26.71%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 1864 NVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKS 2301 ++++L+K+IV R + + +D+ IPLY + EN +F + Q W+ +K F N+++++ ++ + L +L L +LN Y+ L+ + DV+ K + PE W S ++ I +L + I+F+ +HK +S Sbjct: 20 DLQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGP---DVVKKCNQVAACLPEKWFENS-AMRTSI-PQLENFIQFL--LQSAHKLSRS 158
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Celegans
Match: F43G9.12 (pep chromosome:WBcel235:I:8640508:8644399:1 gene:WBGene00009672.1 transcript:F43G9.12a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F43G9.12) HSP 1 Score: 116.316 bits (290), Expect = 2.091e-26 Identity = 137/543 (25.23%), Postives = 237/543 (43.65%), Query Frame = 1 Query: 649 NFLSIEHG----SDR---DSDQENE-WESRQLQKAINKN-IYQPREPKKVDWQLYTNE-------------------------NFENDKQSAVLMELNSISID-ELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAK--AEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPN-FHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVIT 2160 FL E+G ++R D D ENE WE +Q++KA+++ I Q R K+ +L+ + F + ++++ I +L + + E L RKEE K K Q++ ENK++ AK E+P KY + + Y L+EC +EK+ ++ + K K R+ +L R RQD++DQ E + + ++ + R +R R R + +NH EGLS+DDEEP + Q ++++ AS LF+D EY + K+ + ++DAY+ + + SP +RL+++ + L+ WF I + S EI + +++ P I +KV+IP L + V W+ +S +T++L F L ++P +K+ + AI R +CI+ED+ +P+++ E P + QF Q W IK ++ +I +L +E +N+ L G NDV Sbjct: 241 GFLERENGDIDEAERIKGDDDSENEEWEKQQIRKAVSRREIGQLRTEKRNTSKLFGHTVPVEDDTAMDMDIDLDMDVQVIGKPEFTGPSNTGGVVKIEDILAKLKLRIQERDEALNFRKEE----KRKLEQNI---------EENKSMIAKIEMELPNQSTKYTMYQELRVYSRSLLECLNEKVGEINSIIDKKRDCGKSRTSRLSVRRRQDMRDQHAECMQGRNARMGEAAGRAAERDARRGRRRREREFTLAR------INHEEGLSTDDEEPTPQSMNDQKICDEVEAVASVLFADALDEYSDLRKVFGRMTDWLAVDPKSFQDAYVYLCIPKLSSPYVRLQILRADFLRKETILTSMQWFHIAM--LAGSENAEIDQSHEIL----VELAPAIVEKVVIPFLIDTVKEEWDPMSLRQTRHLTTFCS-LFEKLPNLTEKSKQFNAFLNAIRERICDCISEDLFMPIFMPNALEQPICR--QFHDRQFWTCIKLIKSINALSPLISIAARFELVVEKCVNSQCVMAL----RTGSKNDVTA 751
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Celegans
Match: F43G9.12 (pep chromosome:WBcel235:I:8642808:8644399:1 gene:WBGene00009672.1 transcript:F43G9.12b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F43G9.12) HSP 1 Score: 70.4774 bits (171), Expect = 9.330e-13 Identity = 64/259 (24.71%), Postives = 116/259 (44.79%), Query Frame = 1 Query: 1384 QNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPN-FHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDV 2154 Q ++++ AS LF+D EY + K+ + ++DAY+ + + SP +RL+++ + L+ WF I + S EI + +++ P I +KV+IP L + V W+ +S +T++L F L ++P +K+ + AI R +CI+ED+ +P+++ E P + QF Q W IK ++ +I +L +E +N+ L G NDV Sbjct: 4 QKICDEVEAVASVLFADALDEYSDLRKVFGRMTDWLAVDPKSFQDAYVYLCIPKLSSPYVRLQILRADFLRKETILTSMQWFHIAM--LAGSENAEIDQSHEIL----VELAPAIVEKVVIPFLIDTVKEEWDPMSLRQTRHLTTFCS-LFEKLPNLTEKSKQFNAFLNAIRERICDCISEDLFMPIFMPNALEQPICR--QFHDRQFWTCIKLIKSINALSPLISIAARFELVVEKCVNSQCVMAL----RTGSKNDV 249
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Fly
Match: CG1965 (gene:FBgn0037466 transcript:FBtr0081634) HSP 1 Score: 153.68 bits (387), Expect = 5.814e-38 Identity = 172/655 (26.26%), Postives = 309/655 (47.18%), Query Frame = 1 Query: 406 MQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAM---VGHSNSFEKDRQMIRNNFLSIEHGS-DRDSDQE-NEWESRQLQKAI--------------NKNIYQPREPKKVDWQLYTNENFENDKQSAVLMEL---NSISIDELSVGKLSELL----------MKRKEEIID------SKYKNSQDVYIKQQTLMSNENKAI-----SAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTK--SSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIM-NHYEGLSSDDEEPKSSISSRQNEIE-----QIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFTKKSLRT--EIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWI 2202 ++ G IPDAA I A+K+R+ A++Q EE + P G DD +R+ M G E+ Q F ++E+ S D DSD+E NEWE++Q++K + ++ + +P P + + ++ S +L + N++ L+ S + ++ +EI+ S+ K + +S E KA+ + P KY + K Y++ LV+C EK + LEK+ L+ + + L+ R RQDV+DQ EI S K ++A + T + + R ++RE RR RR RE +++ +H +G+SSDDE I+ +Q E+ QI++ + D ++ IE IL +F ++ Y+DA+++ L +L+PL+R EL+ W+PL + W++ + + ++ T ++ D D+ ++P + +K+++PK+T V+ W+ LS T+T LV FI +L + P + N + +L ++I+ R + D+ IP++ +Q +E FFQ Q + +K F N + + I+ LL +LA+ +LN Y+ + + + ND I K +I + P W+ Sbjct: 230 LESGSIPDAAMIHAARKRRQRAREQGAGDYIPIEEPKEP-AKLSNRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQ-----FYAVENDSTDGDSDREMNEWENQQIRKGVTAAQLVHSQHETVLSRFMIKP-APSGIGTGMDDGDSTAAQSTSTLLEQAYAKNALERTNLAAAVRSSVKTKKEKAKATALRTPQEILAAIQSRLSELKERSADHSASMARISTELKALKLQQLECQQNAPTAAAKYKFYQEIKCYVNDLVDCLSEKAPVIYDLEKRALQQYGKNQRYLVNRRRQDVRDQAKEIAESAKPITAASRRTPDYEEQVRRAAEREGRRTRRRCERERNDLLSSHLDGMSSDDE-----IADQQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMKFFAWRKTDMSSYQDAFVSLCLPKVLAPLVRHELVLWSPLLDVYADIENMRWYQACMLYASQADETVEQLKIDP------DINLVPALIEKIVLPKVTALVTECWDPLSTTQTLRLVGFINRLGREFP-LSGTNKQLNKLFESIMERMRLALENDVFIPIFPKQVQEAKTS----FFQRQFCSGLKLFRNFLSWQGILADKLLRELAIGALLNRYLLLAMRVCTP----NDAINKAYIIVNTLPTVWL 857
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Zebrafish
Match: paxbp1 (PAX3 and PAX7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2352]) HSP 1 Score: 166.392 bits (420), Expect = 4.999e-42 Identity = 123/440 (27.95%), Postives = 220/440 (50.00%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQ-----------STFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFT---KKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKI-DILSELSSLIRFINKFACS 2283 KY + Y+ L+EC EK+ ++ LE ++ ++R+ +L++R + D++D+ E + + + + E++ + R RR +N H EGLSSDDEE + I+S +E E+I ++ ++F D ++ S++ I F ++ + Y+DAYI L + +PLIRL+LI+W+PL+ NF WF+ L+ + + +L+ E D + ++P I ++V++PKL IW+ LS ++T LV F+ +L+ PT + +N N +EL++ ++ R + +DI +PL+ + EN N ++ F Q Q W+ +K N++M+ I+ ++L LA++ LN YI L L + + K + FP W S LK L L + RF+ + S Sbjct: 414 KYRFLQEMRGYVGDLLECLSEKVPVILELEAAMHQLLRQRASRLVQRRQDDIKDESSEFSSLSSKAVMAPNLDSFGRDRTAYLELAKQRRIAEREARRTRRRQAREQNDKRAEHKEGLSSDDEETSTDITSFDSERERILKESKKVFEDVVEDFHSLDNIKSHFETWRKLYYSCYRDAYIGLCLPKLFNPLIRLQLISWSPLEVECSNFEYMLWFESLLFYGCGEQSALKKEEDVDNN--------LLPAIVERVLLPKLAVLTDQIWDPLSNSQTYRLVAFMKRLVKDYPTVLHGENRNTQELLRTVIMRIRRTLDDDIFLPLFPKNVMENKNSGAYLFSQRQFWSCVKFLGNILMWDGILSLSVLKDLAIDSTLNRYI---LSALQTTDASEEHVEKCRRVVECFPVQWFSS---LKGQQTLPPLENFCRFLKHLSSS 839
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Zebrafish
Match: paxbp1 (PAX3 and PAX7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2352]) HSP 1 Score: 166.392 bits (420), Expect = 5.767e-42 Identity = 123/440 (27.95%), Postives = 220/440 (50.00%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQ-----------STFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFT---KKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKI-DILSELSSLIRFINKFACS 2283 KY + Y+ L+EC EK+ ++ LE ++ ++R+ +L++R + D++D+ E + + + + E++ + R RR +N H EGLSSDDEE + I+S +E E+I ++ ++F D ++ S++ I F ++ + Y+DAYI L + +PLIRL+LI+W+PL+ NF WF+ L+ + + +L+ E D + ++P I ++V++PKL IW+ LS ++T LV F+ +L+ PT + +N N +EL++ ++ R + +DI +PL+ + EN N ++ F Q Q W+ +K N++M+ I+ ++L LA++ LN YI L L + + K + FP W S LK L L + RF+ + S Sbjct: 414 KYRFLQEMRGYVGDLLECLSEKVPVILELEAAMHQLLRQRASRLVQRRQDDIKDESSEFSSLSSKAVMAPNLDSFGRDRTAYLELAKQRRIAEREARRTRRRQAREQNDKRAEHKEGLSSDDEETSTDITSFDSERERILKESKKVFEDVVEDFHSLDNIKSHFETWRKLYYSCYRDAYIGLCLPKLFNPLIRLQLISWSPLEVECSNFEYMLWFESLLFYGCGEQSALKKEEDVDNN--------LLPAIVERVLLPKLAVLTDQIWDPLSNSQTYRLVAFMKRLVKDYPTVLHGENRNTQELLRTVIMRIRRTLDDDIFLPLFPKNVMENKNSGAYLFSQRQFWSCVKFLGNILMWDGILSLSVLKDLAIDSTLNRYI---LSALQTTDASEEHVEKCRRVVECFPVQWFSS---LKGQQTLPPLENFCRFLKHLSSS 839
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Zebrafish
Match: paxbp1 (PAX3 and PAX7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2352]) HSP 1 Score: 107.842 bits (268), Expect = 1.198e-23 Identity = 85/313 (27.16%), Postives = 157/313 (50.16%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQ-----------STFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFT---KKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNE 1908 KY + Y+ L+EC EK+ ++ LE ++ ++R+ +L++R + D++D+ E + + + + E++ + R RR +N H EGLSSDDEE + I+S +E E+I ++ ++F D ++ S++ I F ++ + Y+DAYI L + +PLIRL+LI+W+PL+ NF WF+ L+ + + +L+ E D + ++P I ++V++PKL IW+ LS ++T LV F+ +L+ PT N ++ + + +C E Sbjct: 414 KYRFLQEMRGYVGDLLECLSEKVPVILELEAAMHQLLRQRASRLVQRRQDDIKDESSEFSSLSSKAVMAPNLDSFGRDRTAYLELAKQRRIAEREARRTRRRQAREQNDKRAEHKEGLSSDDEETSTDITSFDSERERILKESKKVFEDVVEDFHSLDNIKSHFETWRKLYYSCYRDAYIGLCLPKLFNPLIRLQLISWSPLEVECSNFEYMLWFESLLFYGCGEQSALKKEEDVDNN--------LLPAIVERVLLPKLAVLTDQIWDPLSNSQTYRLVAFMKRLVKDYPTVLHGENRNTQVSERMRLQCFE 718
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Zebrafish
Match: gcfc2 (GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]) HSP 1 Score: 103.605 bits (257), Expect = 3.241e-22 Identity = 107/400 (26.75%), Postives = 187/400 (46.75%), Query Frame = 1 Query: 1024 YNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKT----DASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ--TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFN-DKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDW 2199 Y + N F + L+EC EKM + +E ++ +++E L+ + R+ +Q++ I T ++ S + + S S G D EP ++ EIE + A ++F+D E+ ++KIL F E + F+ Y +AYI L +L+PLIR +LI WNPLQ + +F W+ + +F E E D +PTI +K I+ K+ +V +W+ LS +T+ L ++ FN +++ VK V+A++ R + +D+ +PLY +++ E+ FQF Q W+A+K N+ ++ +I ++L +L LE +L Y+ + IL+E + + K I FPE W Sbjct: 386 YRTMNVFSQN---LLECLSEKMALINSVELDMHGLYIDQAEALLSQRREALQEESSRIQKLTYNTDSHSNGDTAGDCSPTQQSLSEDDI---------------GCVPCDWEP---TVEQKEEIESKRAALLKKAQEVFADVQNEFWDVKKILSRFDEWRVSFKDSYNNAYIGLCLPKLLAPLIRHQLIGWNPLQAESEDFEALPWYCAVERFCHGQGYEES-------ENMDKTTLPTIIEKTILSKVQGFVELVWDPLSAQQTRTLTTLCRRIQHDYSVFNGEQSKPVKAFVEAVIQRLRTAVDDDVFVPLYPKKFLEDKRSPQFQFQNKQFWSAVKLLGNMALWGGLIPEHILKELMLEKLLGRYLM--ITILNESDPKH-TVQKCKKIAGCFPESW 754
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Match: PAXBP1 (PAX3 and PAX7 binding protein 1 [Source:NCBI gene;Acc:100145438]) HSP 1 Score: 176.022 bits (445), Expect = 5.988e-45 Identity = 124/436 (28.44%), Postives = 216/436 (49.54%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTF-----------EMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACS 2283 +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + E + + R RR H EGLSSDDEE + I++ E ++I +A ++F DT + SIE I +F + + YKDAYI L +L+PL+R++L+TWNPL+ NF WF+ L+ + + E D + D+ ++P++ +KVI+PKL ++W+ S T+T L + KL++ PT N +N N + L+KA++ R + +D+ +PLY + EN N FFQ Q W+++K N + +H ++ L +L+++G+LN YI L+ D I K + FP W + K + +L + R++ A + Sbjct: 419 RYQFLQEMRGYVQDLLECFREKVPLINELESAMHQLYKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDPFGRDRALFQEHAKQRRIAEREARRTRRRQAREVPGKTAEHLEGLSSDDEETSTDITNFNMEKDRILKEAGKVFEDTLENFHSIEYIKDQFESWRSTYYSTYKDAYIGLCLPKLLNPLVRIQLLTWNPLEANCCNFESMMWFECLLFYGCE----EKEYDKEDV---DIVLLPSLVEKVILPKLAGIAENVWDPFSTTQTNRLAAVVQKLVNGYPTVLNSENKNTEALLKALLARMRRTLDDDVFMPLYPKNVIENKNSAPCIFFQRQFWSSVKLLGNFLKWHGVLSNKALQELSVDGLLNRYI---LMAFQNNENGEDSIKKAQSVITCFPRQWFANLKGGK--TIPQLENFARYLTHLAGT 842
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Match: PAXBP1 (PAX3 and PAX7 binding protein 1 [Source:NCBI gene;Acc:100145438]) HSP 1 Score: 175.637 bits (444), Expect = 8.120e-45 Identity = 124/436 (28.44%), Postives = 216/436 (49.54%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTF-----------EMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACS 2283 +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + E + + R RR H EGLSSDDEE + I++ E ++I +A ++F DT + SIE I +F + + YKDAYI L +L+PL+R++L+TWNPL+ NF WF+ L+ + + E D + D+ ++P++ +KVI+PKL ++W+ S T+T L + KL++ PT N +N N + L+KA++ R + +D+ +PLY + EN N FFQ Q W+++K N + +H ++ L +L+++G+LN YI L+ D I K + FP W + K + +L + R++ A + Sbjct: 435 RYQFLQEMRGYVQDLLECFREKVPLINELESAMHQLYKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDPFGRDRALFQEHAKQRRIAEREARRTRRRQAREVPGKTAEHLEGLSSDDEETSTDITNFNMEKDRILKEAGKVFEDTLENFHSIEYIKDQFESWRSTYYSTYKDAYIGLCLPKLLNPLVRIQLLTWNPLEANCCNFESMMWFECLLFYGCE----EKEYDKEDV---DIVLLPSLVEKVILPKLAGIAENVWDPFSTTQTNRLAAVVQKLVNGYPTVLNSENKNTEALLKALLARMRRTLDDDVFMPLYPKNVIENKNSAPCIFFQRQFWSSVKLLGNFLKWHGVLSNKALQELSVDGLLNRYI---LMAFQNNENGEDSIKKAQSVITCFPRQWFANLKGGK--TIPQLENFARYLTHLAGT 858
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Match: usp39 (ubiquitin specific peptidase 39 [Source:Xenbase;Acc:XB-GENE-853496]) HSP 1 Score: 144.436 bits (363), Expect = 8.202e-35 Identity = 146/541 (26.99%), Postives = 269/541 (49.72%), Query Frame = 1 Query: 667 HGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISA--KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEI--ILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ-TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSI-WNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVIL-SEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFIN 2268 H S+ + D +++WE +Q++KA+ YQ K +D L K+S IS+ ++ + + L R ++S ++ + +++ +S+ + A + K E+ E Y F K Y+ V+C +EK+ ++ LE + ++I ++R+E L KR + D++++ + I TK + Q+T M++ E RR +R + R+ +HYEG+SSDDE S Q E I+ + +F D ++ I+ IL F E + +F Y DAYI+ L +L+P+IR+ L+ WNPL+ + + W++ L +F + E+ + S D K++ + +K +IPK++ +V + W+ LS +T NL F + N+ + V+ L+ ++ + I +D+ IPL+ ++ E+ +F + + W+A+K F NV+ + ++ L +L+L+ +LN Y+ LVIL +E G D + K + P+ W L SSL R +N Sbjct: 288 HKSEDEEDLQDKWEEQQIRKAVK---YQ----KGMDEDLPQVRIPPKSKKSVE----PRISLPPVTAEDIKKKLASR----LNSFHEVHRAHVAEREKYVSDLDSAKTTLEKLEMSSSEQTYKFFKEMKTYVENFVDCVNEKIAQINRLELEMIEIFQKRAESLNKRRQDDLRNESVAVQNISGTKDANGQTTDLMTD-------CELRRKKRRQKRKECGDSDHYEGMSSDDELSTDDERSFQKNRESIRAQSKTIFEDVHEDFHQIKNILSRFTEWRGRFPESYYDAYISLCLHKLLNPIIRVHLLDWNPLEDKKDLEEMTWYQDLEEFCYRENELEMNDENS-----DHKVLSAVIEKTVIPKVSGFVELLWDPLSAVQTDNLAHFCKTNVKH----NESSKAVQGLINCLLSTMKKAIEDDVFIPLFPKRLLEDRFSPHSRFQERRFWSAVKMFQNVLCWDGFLQEETLQELSLDKLLNRYLL--LVILNAEPG--PDSVKKCKRVVECLPQSWFRN--------LESGSSLHRLLN 785
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Match: PAXBP1 (PAX3 and PAX7 binding protein 1 [Source:NCBI gene;Acc:100145438]) HSP 1 Score: 136.732 bits (343), Expect = 1.944e-32 Identity = 112/437 (25.63%), Postives = 199/437 (45.54%), Query Frame = 1 Query: 1021 KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTF-----------EMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFT--KKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACS 2283 +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + E + + R RR H EGLSSDDEE + I++ E ++I +A ++F DT + SIE I +F + + YKDAYI L +L+PL+R++L+TWNPL+ NF WF+ L+ + +K E + D+ ++P++ +KVI+PKL ++W+ S T+T L + KL++ PT N +N N + L+KA++ R + +D+ N + +H ++ L +L+++G+LN YI L+ D I K + FP W + K + +L + R++ A + Sbjct: 399 RYQFLQEMRGYVQDLLECFREKVPLINELESAMHQLYKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDPFGRDRALFQEHAKQRRIAEREARRTRRRQAREVPGKTAEHLEGLSSDDEETSTDITNFNMEKDRILKEAGKVFEDTLENFHSIEYIKDQFESWRSTYYSTYKDAYIGLCLPKLLNPLVRIQLLTWNPLEANCCNFESMMWFECLLFYGCEEKEYDKEDV---------DIVLLPSLVEKVILPKL----NVWDPFSTTQTNRLAAVVQKLVNGYPTVLNSENKNTEALLKALLARMRRTLDDDL-------------------------------LGNFLKWHGVLSNKALQELSVDGLLNRYI---LMAFQNNENGEDSIKKAQSVITCFPRQWFANLKGGK--TIPQLENFARYLTHLAGT 786
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Match: ENSXETT00000037151.1 (GC-rich sequence DNA-binding factor 2-like [Source:NCBI gene;Acc:101734739]) HSP 1 Score: 133.65 bits (335), Expect = 1.711e-31 Identity = 111/382 (29.06%), Postives = 200/382 (52.36%), Query Frame = 1 Query: 994 KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEI--ILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ-TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSI-WNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVIL 2127 K E+ E Y F K Y+ V+C +EK+ ++ LE + ++ ++R+E L KR + D++++ + I TK + Q+T M++ E RR +R + R+ +HYEG+SSDDE S Q E I+ + +F D ++ I+ IL F E + +F Y DAYI+ L +L+P+IR+ L+ WNPL+ + + W++ L +F + E+ + S D K++ + +K +IPK++ +V + W+ LS +T NL F + N+ V+ L+ ++ + I +D+ IPL+ ++ E+ +F + + W+A+K F NV+ + ++ L +L+L+ +LN Y+ LVIL Sbjct: 387 KLEMSSSEQTYKFFKEMKTYVENFVDCVNEKIAQINRLELEMIENFQKRAESLNKRRQDDLRNESVAVQNISGTKDANGQTTDLMTD-------CELRRKKRRQKRKECGDSDHYEGMSSDDELSTDDERSFQKNRESIRAQSKTIFEDVHEDFHQIKNILSRFTEWRGRFPESYYDAYISLCLHKLLNPIIRVHLLDWNPLEDKKDLEEMTWYQDLEEFCYRENEVEMNDENS-----DHKVLSAVIEKTVIPKVSGFVELLWDPLSAVQTDNLAHFCKTNVKH----NESCKAVQGLINCLLSTMKKAIEDDVFIPLFPKRLLEDRFSPHSRFQERRFWSAVKMFQNVLCWDGFLQEETLQELSLDKLLNRYLL--LVIL 750
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Mouse
Match: Paxbp1 (PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]) HSP 1 Score: 185.652 bits (470), Expect = 4.016e-48 Identity = 177/671 (26.38%), Postives = 314/671 (46.80%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAINKNIYQPREPKKVD---------------------WQLYTNENFENDKQSAVLM------ELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISA-KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAI----------QSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKID-ILSELSSLIRFINKFA 2277 IPDAA I A+K+R+LA++ F H S E ++ A + D+ RI S RQ I + IE GSD D+ D+E + WE Q++K IN Q +P +V+ + Y + + ++ K + E+ ++ID L + +K + + + +K +Q + K + +AI + + +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + ++ ++ + R RR + + +H EGLSSDDEE + I++ E ++I ++S++F D + SI+ I +F + K+ + YKDAYI L + +PLIRL+L+TW PL+ +F WF+ L+ + + E + D+ ++PTI +KVI+PKLT ++W+ S T+T +V KLI+ P+ N N N + +KA++ R + +D+ +PLY + EN N + FFQ Q W+++K N + ++ I L +L+++G+LN YI L+ Y +D I K + FP+ W LK + +S+L + R++ A Sbjct: 221 IPDAAFIHAARKKRQLARELGDFTPHDS-----EPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKS---QRQKIAEE-IGIE-GSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPSEVNVYYQNTYQTMPYGASYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMAPVTID------LVKRQLKDRLDSMKELHKTNQQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGQMADHLEGLSSDDEETSTDITNFNLEKDRILKESSKVFEDVLESFYSIDCIKAQFEAWRSKYYMSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFETMLWFESLLFYGCEDREQEK-------DEADVALLPTIVEKVILPKLTVIAETMWDPFSTTQTSRMVGITMKLINGYPSVVNADNKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYI---LMAFQNSEYGDDSIRKAQNVINCFPKQWFVN---LKGERTISQLENFCRYLVHLA 862
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Mouse
Match: Gcfc2 (GC-rich sequence DNA binding factor 2 [Source:MGI Symbol;Acc:MGI:2141656]) HSP 1 Score: 158.688 bits (400), Expect = 1.084e-39 Identity = 159/635 (25.04%), Postives = 303/635 (47.72%), Query Frame = 1 Query: 418 DIPDAAAIDHAKKQRELAKKQFKA------HSSSSEE-----DEIPHVNFIKHGMVMAEHGINPDDSD-RIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELN-SISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQ---FDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ--TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFI 2265 +IPDAA I A+++RELA+ HS S+ + +E P + PDD + RI + + + ++ + ++ WE +Q++KA+ Q N + + +S L + + SIS +++ + + L R ++ +++ Q Y K + + + AI Y + K Y+ +++C +EK+ +V LE + +RSE L+KR + +++ + ++ ++SA S + + E+RR++R + RE +H EG+SSDDE + +++ I D ++F D ++C+++ IL +F + +EKF Y +A++ L +LSPLIR++L+ WNPL+ + K WF + +F + S+ D + D KI+ + +K ++P+LT++V +IW+ LS ++T++L Q + N+ + N ++L+K+IV R + I +DI IPLY + +E +F + Q W A+K F N+++++ ++ + L L L +LN Y+ ++ L+ DV+ K I PE W S ++ I +L + I+F+ Sbjct: 122 EIPDAAFIQAARRKRELARTPGDYISLDVNHSCSTSDCKRSNEEDPESD--------------PDDHEKRILFTPKPQTLRQRMAEETSIRSEESSEESQEDENQDIWEQQQMRKAVRIPAGQ-------------NTDLSHSSKSQTLKKFDTSISFPPVNLEIIKKQLNNRLT-LLQESHRSHQREYEKYEQDIKSSKTAIQNLESASDHAQNYRFYRGMKSYVENIIDCLNEKIVSIVELESSMYTLLLKRSEALLKRRQDELKCESSYLQQLSRKDETSANGSLAVDEKDQRILEEIEARRMQRRQARELSGSCDHQEGMSSDDELSPAEMTNFHKCQGDILQDCKKVFEDVHDDFCNVQNILLKFQQWREKFPDSYYEAFVGFCLPKLLSPLIRVQLLDWNPLKMDSIGLDKMPWFTAITEFMESSM-----DDIGKEDGSDKKILAAVINKTVVPRLTDFVETIWDPLSTSQTRSLTVHCRVAFEQFASENEVSKNKQDLLKSIVARMKKSIEDDIFIPLYPKSSEEGKMSPHSKFQERQFWGALKLFRNILLWNGLLPDDTLQDLGLGKLLNRYL---IISLTNAVPGPDVVKKCSQIAACLPERWFENS-AMRTSI-PQLENFIKFL 718
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Mouse
Match: Gcfc2 (GC-rich sequence DNA binding factor 2 [Source:MGI Symbol;Acc:MGI:2141656]) HSP 1 Score: 85.5001 bits (210), Expect = 9.511e-19 Identity = 45/151 (29.80%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 1672 ITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLV 2121 + D + D KI+ + +K ++P+LT++V +IW+ LS ++T++L Q + N+ + N ++L+K+IV R + I +DI IPLY + +E +F + Q W A+K F N+++++ ++ + L L L +LN Y+ L Sbjct: 10 MDDIGKEDGSDKKILAAVINKTVVPRLTDFVETIWDPLSTSQTRSLTVHCRVAFEQFASENEVSKNKQDLLKSIVARMKKSIEDDIFIPLYPKSSEEGKMSPHSKFQERQFWGALKLFRNILLWNGLLPDDTLQDLGLGKLLNRYLIISLT 160
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Match: sp|P58501|PAXB1_MOUSE (PAX3- and PAX7-binding protein 1 OS=Mus musculus OX=10090 GN=Paxbp1 PE=1 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 2.809e-47 Identity = 177/671 (26.38%), Postives = 314/671 (46.80%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAINKNIYQPREPKKVD---------------------WQLYTNENFENDKQSAVLM------ELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISA-KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAI----------QSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKID-ILSELSSLIRFINKFA 2277 IPDAA I A+K+R+LA++ F H S E ++ A + D+ RI S RQ I + IE GSD D+ D+E + WE Q++K IN Q +P +V+ + Y + + ++ K + E+ ++ID L + +K + + + +K +Q + K + +AI + + +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + ++ ++ + R RR + + +H EGLSSDDEE + I++ E ++I ++S++F D + SI+ I +F + K+ + YKDAYI L + +PLIRL+L+TW PL+ +F WF+ L+ + + E + D+ ++PTI +KVI+PKLT ++W+ S T+T +V KLI+ P+ N N N + +KA++ R + +D+ +PLY + EN N + FFQ Q W+++K N + ++ I L +L+++G+LN YI L+ Y +D I K + FP+ W LK + +S+L + R++ A Sbjct: 221 IPDAAFIHAARKKRQLARELGDFTPHDS-----EPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKS---QRQKIAEE-IGIE-GSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPSEVNVYYQNTYQTMPYGASYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMAPVTID------LVKRQLKDRLDSMKELHKTNQQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGQMADHLEGLSSDDEETSTDITNFNLEKDRILKESSKVFEDVLESFYSIDCIKAQFEAWRSKYYMSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFETMLWFESLLFYGCEDREQEK-------DEADVALLPTIVEKVILPKLTVIAETMWDPFSTTQTSRMVGITMKLINGYPSVVNADNKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYI---LMAFQNSEYGDDSIRKAQNVINCFPKQWFVN---LKGERTISQLENFCRYLVHLA 862
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Match: sp|Q9Y5B6|PAXB1_HUMAN (PAX3- and PAX7-binding protein 1 OS=Homo sapiens OX=9606 GN=PAXBP1 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 5.230e-46 Identity = 179/685 (26.13%), Postives = 318/685 (46.42%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAINKNIYQPREPKKVD---------------------WQLYTNENFENDKQSAVLM------ELNSISIDELSVGKLSELLMKRKEEIIDSK---YKNSQDVYIKQQTLMSNENKAISA-KAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAI----------QSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKID-ILSELSSLIRFI---------NKFACS 2283 IPDAA I A+K+R++A++ F H ++E ++ A + D+ RI S RQ I + IE GSD D+ D+E + WE Q++K IN Q +P +V+ + Y + + ++ K + E+ ++ID L+ K+ ++ +DS +K ++ + K + +AI + + +Y + Y+ L+ECF EK+ + LE +++K+R+ +L++R + D++D+ E + + + ++ ++ + R RR + + +H EGLSSDDEE + I++ E ++I ++ ++F D + SI+ I +F + K+ YKDAYI L + +PLIRL+L+TW PL+ +F WF+ L+ F R + D D+ ++PTI +KVI+PKLT ++W+ S T+T +V KLI+ P+ N +N N + +KA++ R + +D+ +PLY + EN N + FFQ Q W+++K N + ++ I L +L+++G+LN YI L+ Y +D I K + FP+ W LK + +S+L + R++ N CS Sbjct: 219 IPDAAFIHAARKKRQMARELGDFTPH-----DNEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKS---QRQKIAEE-IGIE-GSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTID---------LVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESGKVFEDVLESFYSIDCIKSQFEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLL-FYGCEEREQEKDDV------DVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYI---LMAFQNSEYGDDSIKKAQNVINCFPKQWFMN---LKGERTISQLENFCRYLVHLADTIYRNSIGCS 871
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Match: sp|Q8BKT3|GCFC2_MOUSE (GC-rich sequence DNA-binding factor 2 OS=Mus musculus OX=10090 GN=Gcfc2 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 7.580e-39 Identity = 159/635 (25.04%), Postives = 303/635 (47.72%), Query Frame = 1 Query: 418 DIPDAAAIDHAKKQRELAKKQFKA------HSSSSEE-----DEIPHVNFIKHGMVMAEHGINPDDSD-RIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELN-SISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQ---FDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ--TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFI 2265 +IPDAA I A+++RELA+ HS S+ + +E P + PDD + RI + + + ++ + ++ WE +Q++KA+ Q N + + +S L + + SIS +++ + + L R ++ +++ Q Y K + + + AI Y + K Y+ +++C +EK+ +V LE + +RSE L+KR + +++ + ++ ++SA S + + E+RR++R + RE +H EG+SSDDE + +++ I D ++F D ++C+++ IL +F + +EKF Y +A++ L +LSPLIR++L+ WNPL+ + K WF + +F + S+ D + D KI+ + +K ++P+LT++V +IW+ LS ++T++L Q + N+ + N ++L+K+IV R + I +DI IPLY + +E +F + Q W A+K F N+++++ ++ + L L L +LN Y+ ++ L+ DV+ K I PE W S ++ I +L + I+F+ Sbjct: 122 EIPDAAFIQAARRKRELARTPGDYISLDVNHSCSTSDCKRSNEEDPESD--------------PDDHEKRILFTPKPQTLRQRMAEETSIRSEESSEESQEDENQDIWEQQQMRKAVRIPAGQ-------------NTDLSHSSKSQTLKKFDTSISFPPVNLEIIKKQLNNRLT-LLQESHRSHQREYEKYEQDIKSSKTAIQNLESASDHAQNYRFYRGMKSYVENIIDCLNEKIVSIVELESSMYTLLLKRSEALLKRRQDELKCESSYLQQLSRKDETSANGSLAVDEKDQRILEEIEARRMQRRQARELSGSCDHQEGMSSDDELSPAEMTNFHKCQGDILQDCKKVFEDVHDDFCNVQNILLKFQQWREKFPDSYYEAFVGFCLPKLLSPLIRVQLLDWNPLKMDSIGLDKMPWFTAITEFMESSM-----DDIGKEDGSDKKILAAVINKTVVPRLTDFVETIWDPLSTSQTRSLTVHCRVAFEQFASENEVSKNKQDLLKSIVARMKKSIEDDIFIPLYPKSSEEGKMSPHSKFQERQFWGALKLFRNILLWNGLLPDDTLQDLGLGKLLNRYL---IISLTNAVPGPDVVKKCSQIAACLPERWFENS-AMRTSI-PQLENFIKFL 718
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Match: sp|P16383|GCFC2_HUMAN (GC-rich sequence DNA-binding factor 2 OS=Homo sapiens OX=9606 GN=GCFC2 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.243e-31 Identity = 161/644 (25.00%), Postives = 310/644 (48.14%), Query Frame = 1 Query: 421 IPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHG---INPDDSD-RIAMVGHSNSFEK---DRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQ---QTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQ--FDEIILSTKSSAIQSTFEMSNRAS-XXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNP--LQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKS 2301 IPDAA I A+++RELA+ Q S ++ H + I GM PDD + RI + + + + RN S E D ++++ WE +Q++KA+ I + R+ +D + +++ ++ I + + LL + + K QDV + Q L S+ N+A++ K + + K Y+ L++C +EK+ + +E + +++ +KR + +++ + + + + ++ F + + + + ESRR +R + R NH EG SSDDE P + + Q I ++F + ++C+I+ IL +F + +EKF Y +A+I+ + +L+PLIR++LI WNP L++ + WFK + +F S + D+ D K++ I +K IIP+LT++V +W+ LS ++T +L+ ++ + T N+ + + ++L+K+IV R + + +D+ IPLY + EN +F + Q W+ +K F N+++++ ++ + L +L L +LN Y+ L+ + DV+ K + PE W S ++ I +L + I+F+ +HK +S Sbjct: 134 IPDAAFIQAARRKRELARAQDDYISL-----DVQHTSSIS-GMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQED---EKQDTWEQQQMRKAV--KIIEERD---IDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALNCKF-----------YKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSS-----VEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGP---DVVKKCNQVAACLPEKWFENS-AMRTSI-PQLENFIQFL--LQSAHKLSRS 740
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Match: sp|Q9FNN3|ILP1_ARATH (Transcriptional repressor ILP1 OS=Arabidopsis thaliana OX=3702 GN=ILP1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.189e-16 Identity = 80/299 (26.76%), Postives = 137/299 (45.82%), Query Frame = 1 Query: 1333 EGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPL-QTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKL-TEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAI----PLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKS 2211 EG SS DE + S+ + + + A ++FSD EY + K+ F K + Y+DAY++ + I SP +RLEL+ W+PL Q +F W +L + K + D + D ++P + +KV IP L + V W++LS ET+N V + + + ++ + EL AI R E IA I++ PL ++ P +++F +++ N+ M+ +I+ +L LAL +L + + S I+D +T+ I S W S Sbjct: 558 EGESSTDES-DTETSAYKETRDSLLQCADKVFSDASEEYSQLSKVKARFERWKRDYSSTYRDAYMSLTVPSIFSPYVRLELLKWDPLHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDT-----DANLVPELVEKVAIPILHHQIVRCWDILSTRETRNAVAATSLVTNYVSASSEA---LAELFAAIRARLVEAIAA-ISVPTWDPLVLKAVPNTPQVAAYRF-----GTSVRLMRNICMWKDILALPVLENLALSDLLFGKVLPH--VRSIASNIHDAVTRTERIVASLSGVWTGPS 839
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Match: A0A1S3HN87 (PAX3- and PAX7-binding protein 1 OS=Lingula unguis OX=7574 GN=LOC106156669 PE=4 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 3.566e-77 Identity = 212/665 (31.88%), Postives = 350/665 (52.63%), Query Frame = 1 Query: 406 MQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMA------EHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAIN-KNIYQPREPKKVDWQLYTNENFEND----------------------------KQSAVLMELNSISIDE------LSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKID-ILSELSSLIRFI 2265 +++G+IPDA I A+K+R++A++ D IP + +K + E+ ++ ++ +RI N+ K+RQ I+++FL+ EHGSD DSD E EWE +Q++K ++ I ++P Q Y+ D +SA + + ++VG ++ L +R E + DV + + +E+ + +I LE +Y F + Y+ LVEC +EK+ + LE L K+R+EKL+KR ++DV+DQ E I + KSS Q R R+++RE+RR RR R R++ NI NH+EGLSSDDEE + I+ E ++I+T++ +LF D E+C ++ I F E K+ + Y DAYI L + SPLIRL+LI WNPLQ P+F + W++ L+ + K + + D+ DLK++PTI DK+++ ++ V +W+ +S +ET NLV+ + KL + P+F+ + N + LV+A+V R + + +D+ +PLY +Q E+ + FF Q+W IK N++ + I + +L ++AL+ +LN YI G LS + + KV +I +FP+DW S L+ D L +L SL RF+ Sbjct: 164 LERGEIPDAHLIHMARKRRQMAREMG---------DVIPLDDTVKVEKANSRLVRDDENDVSDEEEERIDFT--VNTLAKERQKIKDDFLAAEHGSD-DSDHEREWEEQQIRKGVSLPQIQSNQQPSYSYDQYYSQSAAVQDSYSSSSPSPYTAQGAINGSTPAGVPAGFSRSATYVGAGDKRVGPPKELPPITVGDVTRRLKERLESLQQVHRARVLDVQKMEDNIKFSESTITKCEGDIGALEERYKFFQEMRGYVRDLVECLNEKVPAVNALEASMLNCLKQRAEKLVKRRQEDVKDQSQEYI-TNKSSTAQVPAVEEARQRRVAEREARRARRRRARQSQNIANHHEGLSSDDEESQLDITKAIVERDRIRTESQKLFEDVVDEFCKLKLIKARFEEWKDLYGDTYNDAYIGLCLPKLFSPLIRLDLIEWNPLQVNCPDFEEMRWYETLMFYGYKE--GQQLEDSDQ----DLKLLPTIVDKILLSRIKALVEDVWDPMSSSETTNLVRTVRKLATDYPSFSSDSKNTQALVQAVVKRMRKTLDDDVFMPLYPKQVLEDRKSGACAFFNRQMWTCIKLLNNILKWSGICDDGVLQEMALDSLLNRYIMLG---LSNSEINSSTLEKVQVITSTFPKDWFSG---LQDDNTLPQLQSLCRFL 803
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Match: A0A210Q9X5 (PAX3-and PAX7-binding protein 1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT07063 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 1.052e-67 Identity = 191/643 (29.70%), Postives = 345/643 (53.65%), Query Frame = 1 Query: 406 MQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIK-----HGMVMAEHGINPDDSD-RIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNEN--------FENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKA----ISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLV--ILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFI 2265 + KG+IPDA I + +K+R+ A+ D +P N K +V + +D D RI + + E RQ I++ FL+ EHGSD +SDQE EWE++Q++K + + QP + K D Q ++E +++ + ++S +++ KR +E +DS + S+ ++++L+++ + A ++ + + LE +Y F + Y+ LVEC +EK+ + LE + L + + +SE+L+ R +QDV+DQ + +++K+ + + E + R+++RE+RR RR R RE +I H+EGLSSDDEE +S I+ E + I + ++LF D + ++ + + F K ++ Y +AYI L ++ +P +RL+LI WNPL+ +F WF+ L+ + + TE + D+K++PTI +K+I+P++T ++W+ LS T+T LV I ++I P + N ++ L+ A+V R + + +D+ +PLY + EN + + FF Q W IK ++M +H II ++L LAL+G+LN Y+ GL +L++ + I K + +FP++W + DE K L +L +L +++ Sbjct: 167 LGKGEIPDANMIHNIRKKRQQARNMG---------DFVPLDNAAKPENASSRLVREDDNDKSEDEDGRIDFTINVEALE--RQRIKDQFLAAEHGSDEESDQEREWEAQQIRKGVT--VGQPVDTKTED-QEASDEGTRQSNGYTYQSTTTATTFQPFTAMSKTNNLADINMDVIKKRLKERLDSMEEVSRRHTQERESLITDIDDADQSTVTCEGSVDALEKRYRFFQEMRGYVRDLVECLNEKVPIINDLETRMLNLLRRQSEQLVSRRQQDVRDQCQDY-MTSKAKIVMESSEGQAKQMRVAEREARRSRRRRKREVKSIRGHHEGLSSDDEENQSDITKFNLEKDAIDSGVARLFEDVEEDFKEVTCVRERFESWKREYGETYSEAYIGLCLPNLFNPFVRLQLIQWNPLEAHGQDFEDTQWFETLVFYGCQPEETEQDANND-----DVKLLPTIVEKIIVPRITVLAETVWDPLSTTQTSRLVNTIQRIIRDYPCAHSSNKFMQNLLHAVVKRLQKTLDDDVFMPLYPKSAIENRSSGAAVFFHRQSWTCIKLLGSIMSWHAIISTSILQNLALDGLLNRYVILGLCNSVLNQ-----ETIQKCHSVVSTFPKEWFAGLDEEK--TLPQLENLCKYM 782
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Match: A0A0X3NR82 (GCFC domain-containing protein (Fragment) OS=Schistocephalus solidus OX=70667 GN=TR148711 PE=4 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 8.556e-65 Identity = 188/674 (27.89%), Postives = 314/674 (46.59%), Query Frame = 1 Query: 352 INETKDYYECSSSNIAFNMQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEI-PHVNFIK----------------HGMVMAEHGINPDDSD----------------RIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAI---NKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQ------------------------STFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPN---FHKWNWFKILIQFTKKSLRT------------------EIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSI-WNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVIL 2127 I K + SS + ++ G IPDA I A+KQR+ AK Q +A ++ EDE+ P I + + P S R+ + + E +R+ IR +FL+ EH SDRDSDQE EWE +Q++KAI N + +P N + Q+ + ++S+ + +L R+E++ + N ++ Q+ L ++ ++ +P F + Y+ +++CF EKM K+ +L++K + +++ER++ L R R DV+D DE+ + + ++ E++N A+ R L I + Y+G+S+DDEE + I+ R+ + I DA +LF DT EYC++ IL F E + + Y AYI L +LSPLIRL+L+ WNP++ PN + + +WF L+ ++ + E+ S+ DL IIP+ +K+++P+LTE VS W+ LS ++Q LVK + L++Q PT N + + K+L +AI+ R I ED+ IPLY + NP + FF Q+ AA+K +N+M++H++ L + L ++N YI GL L Sbjct: 148 IPTVKPLNKASSEQFSSMLKHGVIPDANTIHLARKQRQRAKFQLEA---ATAEDEVTPSAQLIPVSKNDGRRLIREDDDDEDIDEDTGDVAPILSQQRPAFQVGEFHDPKMRRVDISRGLHRKEDERRSIREDFLAAEHASDRDSDQETEWERQQIRKAISSQNSVVLDALQP-------VPGINEQKTGQTKRSSDAYHSPSGDISLSSIKSILQTRREKLKQAVDSNKAELAAAQEDLARGQDLICKSRTTLPEHANSLVFFQEIRDYVRDVIDCFSEKMSKIEYLDRKSIMLYRERADNLSSRRRSDVKDIADEVAIGLAGACVKEDAKAAEARQRRKADREARRARRLRQLEVANIAAAHDTSSQGTGPVRRFEVLLGIPSPYDGVSTDDEESPAVIAKRKADTNDILNDAQRLFDDTVEEYCTLSSILGHFEEWRRRSPSTYAKAYIALCLPQLLSPLIRLQLLGWNPIK-PNCACYDEQSWFSDLVDYSAGLSKCHKNGPSFKVGDCSEDDEEEVSRTLSTSPDQDLSIIPSTVEKILVPRLTEIVSSSWDPLSTNQSQRLVKTVRSLVTQWPTVNTDSLSTKQLFEAILKRMEVTIQEDVFIPLYPKHILTNPQSPGYLFFCRQMNAAMKMLSNLMLWHDLFASAALQHVVLTCLVNRYILVGLASL 810
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Match: K1PEX0 (GC-rich sequence DNA-binding factor-like protein OS=Crassostrea gigas OX=29159 GN=CGI_10006840 PE=4 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.194e-62 Identity = 190/637 (29.83%), Postives = 330/637 (51.81%), Query Frame = 1 Query: 406 MQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSD-RDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLS-----ELLMKRKEEIIDSKYKNSQDVYIKQQTLMSN----ENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFA 2277 ++KG+IPDA I +K+R+ Q + + D+ V K +V + DD + + N+ +DR I+N FL+ EHGS+ DSDQE EWE +Q++K ++ QP + +++ + + + +L + + L+ S EL+ KR ++ ++S + + + +L+S+ E + + ++ LE +Y F + Y+ LV+C EK+ + LE++ + K ++ K + R +QDV+DQ E + ST + + S E + R ++RE+RR RR R RE +I+ H++GLSSDDEE +S I+ E E + + ++F D ++ ++ + F + K+ ++ Y+DAYI L +L+P IRL LI WNPL+ +F WF L+ + K + +T + + D++++P+I +KV++PKL+ S+W+ LS T+T LV I KL P N + L+ IV R + + +D+ +PLY + EN + + FF Q+W IK N++ +H I+ +L L+L+G+LN YI GL G + I K I +FP++W +E K + +L +L RF+ A Sbjct: 172 IKKGEIPDAMMIHMIRKKRQ----QARDYGDFIPLDDTERVENSKSRLVRDDDNDKSDDDENERIDFSVNTQARDRIKIQNEFLAAEHGSENEDSDQEREWEEQQIKKGVSLGSEQP-DGGSSAAAPTSSDQYNGFQDTTILEKKTFTAFPSLTQTGGSTVINMELIRKRLQDRLNSMDEVHRSHTRDRDSLVSDIDDTEKSIETCQEKVAGLEARYRFFQEMRGYVRDLVDCLSEKVPDINSLEQRMTNLWKTQARKFLSRRQQDVRDQCQEYMTSTANVDLTSP-EAVEKQRRTAEREARRSRRRRAREMKDIVGHHDGLSSDDEENQSEIAKYNVEKESLLSGQERVFEDVVEDFSEVDSVRERFEDWKQTYKDTYQDAYIGLCLPKLLNPYIRLSLINWNPLEADCMDFEDTKWFDTLVFYGFK------LQETIAKDDDDIRLLPSIVEKVVLPKLSVIAESVWDPLSTTQTSRLVNVISKLGRDYPCIQANNKATQHLLNVIVRRIRKTLEDDVFMPLYPKSVLENRSSNASVFFHRQLWVCIKLLGNILSWHGILSNQMLRSLSLDGLLNRYIILGLC---NSGVNKETIQKCQSIISTFPKEWFEDLEEDK--TMPQLENLGRFLVSVA 791
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Match: A0A0L8GH32 (GCFC domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22033654mg PE=4 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.449e-60 Identity = 192/648 (29.63%), Postives = 330/648 (50.93%), Query Frame = 1 Query: 253 KTSTETIPIHQDLDIHVQHNLKLIVKQ----PNPPAVINETKDYYECSSSN---IAFNMQKGDIPDAAAIDHAKKQRELAKK--QFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRD-SDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNE----NFENDKQS----AVLMELNSISIDELSVGKLS-ELLMKRKEEIIDSKYKNSQDVYIKQQTL---MSNENKAIS-AKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQ--TPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTE-WVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGL 2118 KT+ T P+ ++ + L+ + ++ A+INE + E + + + ++KG+IPDA I +K+R++A++ F + + E + ++ + ++ RI N ++RQ +++ FL+ EHGSD++ SD E+ WE +Q++KA+N + + + + E N++ D+ S AV S+ +L+ EL+ K+ +E +DS + + + TL + + NK I A+ ILE ++ F + Y+ LVEC +EK+ + LE + + K+R+EKL R +QDV+DQ + S I + M R + R SRR R +R+ + H+EGLSSDDEE +S I+ +E +I +LF D + ++C + I F E K K Y++AYI L + +P +RLELI WNPL+ +F W++ ++ + I D SI+F IP+I +KVI+PKLT V +W+ LS ++T V + +L PT + ++ N + L++A+V R + + +D+ +PLY++ EN + FF Q W+ IK N++ ++ I+ +L LALEG+LN YI GL Sbjct: 111 KTAPATPPVEAPPVVNTEEKLRRLREELCTLNGDDALINEEPESDEETPKDRKMLRAVLKKGEIPDATMIHMIRKKRQMAREMGDFIPLDEAGAKAENSNSRLVRDDDHDKSDDDDDEEG-RIDF--SVNREARERQKMKDEFLAAEHGSDQEGSDLESGWEEQQIRKAVNLQQVSRDDDQPTQYAMPPAEKGDANYKADQASYINQAVKSNFQPFSLTSKGSNELTLELIQKKLKERLDSIMEVHRSHVSEHDTLSLHLEDSNKEIEEAEKSSSILEERFKFFQETRGYVRDLVECLNEKVPLIHELEARMAYLLKQRAEKLTLRRQQDVRDQCQDYTASKVKVVIDAAEAMQRRVAEREARRSRRRRARESRD---LSGHHEGLSSDDEENQSDITKFNSEKMEILQLTEKLFDDVEEDFCDVNNIKRLFEEWKTKNAESYQEAYIGLCLPKLFNPFVRLELIDWNPLEENAKDFEDCRWYECCAMYSYQD--ENISQDEDSIKF-----IPSIVEKVILPKLTVIAVDVWDPLSTSQTSRFVNLVQRLCQDYPTVHGESKNTQALLQALVERMKKTLDDDVFMPLYLKSILENRSSGPAVFFHRQSWSCIKLLGNILSWYRILATKMLHSLALEGLLNRYILLGL 745
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Cavefish
Match: gcfc2 (GC-rich sequence DNA-binding factor 2 [Source:NCBI gene;Acc:103043422]) HSP 1 Score: 107.071 bits (266), Expect = 2.081e-23 Identity = 141/613 (23.00%), Postives = 273/613 (44.54%), Query Frame = 1 Query: 409 QKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSD----RIAMVGHSNSF-EKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVY-IKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISI------LVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFN-DKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDW 2199 QK +IPD+ I K+QR A+ Q + + P+ + G EH + D+ D RI S + E+ + + + + + ++ WE +Q++K + ++ Q R + L + +++I E ++ +S ++KR+ I K ++ ++V+ ++ L + SA++ + LE Y + + Y ++ ++EC EKM + +E ++ +++E L+ + RQ+VQ + + T S+ QS E ++ +E+ ++ + E +D E + Q++ I + ++FSD ++ + KIL F E + F Y +AYI L +L+PLIR +LI WNPL+ +F W+ + F E E D K +P I +K I+ K+ +V +W+ LS E+Q L ++ F+ +++ VK ++A++ + + D+ IPLY + + ++ FQF Q W A+K N+ ++ ++ ++L +L L+ ++N Y+ L+ S + VI K I FP W Sbjct: 187 QKVNIPDSKKIRAVKEQRRRARAQQDYIPLDEDRESTPNRSIDGEGDPSDEHRDSDDEPDDHERRIEFAPKSKTVRERMAEKMGGSSSEESESDSQKEEDQHLWEEQQIRKGVKRHQKQSR--------------------ARPLRQKKTVNIPE-TLPPVSINIIKRR---ITGKLESLKEVHRAREAELRRMQLDMESARSSLENLE-NYPADEQLRFYRTMNIFSQNMLECLSEKMALINSVELDMHSLYIDQAESLLSQRRQEVQQESTRLQQLTYSTNAQSNGET-------------LVKTDPPKESAHMEDDCEIFPADLEATAEQEAELQSKRADILKRSQEIFSDVQEDFWDVRKILSRFNEWRVSFPESYNNAYIGLCLPKLLAPLIRHQLIGWNPLKAEGEDFEALPWYSAVENFCHGQGYEES-------ENADKKTLPAIIEKSILSKMQGFVELVWDPLSLQESQCLASLCRRIQEDYSVFDGEQSKPVKAFMEAVIQKLKGAVDNDVFIPLYPKSFLDDKTSPQFQFQNQQFWCAVKLLGNMALWDGLVAESVLKELMLDKLVNRYLMMTLLNESSPKH---VIQKCKKITSCFPNSW 751
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Cavefish
Match: gcfc2 (GC-rich sequence DNA-binding factor 2 [Source:NCBI gene;Acc:103043422]) HSP 1 Score: 106.686 bits (265), Expect = 2.567e-23 Identity = 141/614 (22.96%), Postives = 273/614 (44.46%), Query Frame = 1 Query: 409 QKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSD----RIAMVGHSNSF-EKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVY-IKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISI------LVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFN-DKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWI 2202 QK +IPD+ I K+QR A+ Q + + P+ + G EH + D+ D RI S + E+ + + + + + ++ WE +Q++K + ++ Q R + L + +++I E ++ +S ++KR+ I K ++ ++V+ ++ L + SA++ + LE Y + + Y ++ ++EC EKM + +E ++ +++E L+ + RQ+VQ + + T S+ QS E ++ +E+ ++ + E +D E + Q++ I + ++FSD ++ + KIL F E + F Y +AYI L +L+PLIR +LI WNPL+ +F W+ + F E E D K +P I +K I+ K+ +V +W+ LS E+Q L ++ F+ +++ VK ++A++ + + D+ IPLY + + ++ FQF Q W A+K N+ ++ ++ ++L +L L+ ++N Y+ L+ S + VI K I FP W Sbjct: 187 QKVNIPDSKKIRAVKEQRRRARAQQDYIPLDEDRESTPNRSIDGEGDPSDEHRDSDDEPDDHERRIEFAPKSKTVRERMAEKMGGSSSEESESDSQKEEDQHLWEEQQIRKGVKRHQKQSR--------------------ARPLRQKKTVNIPE-TLPPVSINIIKRR---ITGKLESLKEVHRAREAELRRMQLDMESARSSLENLE-NYPADEQLRFYRTMNIFSQNMLECLSEKMALINSVELDMHSLYIDQAESLLSQRRQEVQQESTRLQQLTYSTNAQSNGET-------------LVKTDPPKESAHMEDDCEIFPADLEATAEQEAELQSKRADILKRSQEIFSDVQEDFWDVRKILSRFNEWRVSFPESYNNAYIGLCLPKLLAPLIRHQLIGWNPLKAEGEDFEALPWYSAVENFCHGQGYEES-------ENADKKTLPAIIEKSILSKMQGFVELVWDPLSLQESQCLASLCRRIQEDYSVFDGEQSKPVKAFMEAVIQKLKGAVDNDVFIPLYPKSFLDDKTSPQFQFQNQQFWCAVKLLGNMALWDGLVAESVLKELMLDKLVNRYLMMTLLNESSPKH---VIQKCKKITSCFPNSWF 752
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Cavefish
Match: gcfc2 (GC-rich sequence DNA-binding factor 2 [Source:NCBI gene;Acc:103043422]) HSP 1 Score: 102.064 bits (253), Expect = 8.804e-22 Identity = 138/613 (22.51%), Postives = 264/613 (43.07%), Query Frame = 1 Query: 409 QKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSD----RIAMVGHSNSF-EKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVY-IKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISI------LVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFN-DKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDW 2199 QK +IPD+ I K+QR A+ Q + + P+ + G EH + D+ D RI S + E+ + + + + + ++ WE +Q++K + ++ Q R + L + +++I E ++ +S ++KR+ I K ++ ++V+ ++ L + SA++ + LE Y + + Y ++ ++EC EKM + +E ++ +++E L+ + RQ+VQ + ST+ + M + E +D E + Q++ I + ++FSD ++ + KIL F E + F Y +AYI L +L+PLIR +LI WNPL+ +F W+ + F E E D K +P I +K I+ K+ +V +W+ LS E+Q L ++ F+ +++ VK ++A++ + + D+ IPLY + + ++ FQF Q W A+K N+ ++ ++ ++L +L L+ ++N Y+ L+ S + VI K I FP W Sbjct: 171 QKVNIPDSKKIRAVKEQRRRARAQQDYIPLDEDRESTPNRSIDGEGDPSDEHRDSDDEPDDHERRIEFAPKSKTVRERMAEKMGGSSSEESESDSQKEEDQHLWEEQQIRKGVKRHQKQSR--------------------ARPLRQKKTVNIPE-TLPPVSINIIKRR---ITGKLESLKEVHRAREAELRRMQLDMESARSSLENLE-NYPADEQLRFYRTMNIFSQNMLECLSEKMALINSVELDMHSLYIDQAESLLSQRRQEVQQE------STRLQQLTCNAHMED--------------------------DCEIFPADLEATAEQEAELQSKRADILKRSQEIFSDVQEDFWDVRKILSRFNEWRVSFPESYNNAYIGLCLPKLLAPLIRHQLIGWNPLKAEGEDFEALPWYSAVENFCHGQGYEES-------ENADKKTLPAIIEKSILSKMQGFVELVWDPLSLQESQCLASLCRRIQEDYSVFDGEQSKPVKAFMEAVIQKLKGAVDNDVFIPLYPKSFLDDKTSPQFQFQNQQFWCAVKLLGNMALWDGLVAESVLKELMLDKLVNRYLMMTLLNESSPKH---VIQKCKKITSCFPNSW 716
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Cavefish
Match: paxbp1 (PAX3 and PAX7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2352]) HSP 1 Score: 83.5741 bits (205), Expect = 4.097e-16 Identity = 119/494 (24.09%), Postives = 219/494 (44.33%), Query Frame = 1 Query: 403 NMQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQEN------EWESRQLQKAINKNIYQPREPKKVDWQLYTNENFEN------------------DKQSAVLMELN-SISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEI---------KYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEI-ILSTKS-------------SAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPL--QTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDK 1734 +++ G+IPDAA I A+K+R++A++ + E E+ + + + G + +D RI G + RQ I + IE D D E WE Q++K I+ Q +P+ D +Y +E D V E I S+ ++ L+K++ S + +D ++ + E +A ++ IL++ +Y + Y+ L+ECF EK+ ++ LE ++ ++R+ + ++R + D++D+ E LS K+ +A Q E+ + R RR ++ H EGLSSDDEE + I+S E +++ ++ ++F D ++ S++ I F ++ + Y+DAYI L + +PLIRL+LI W+PL + PNF WF+ L+ + E +T+T + D+ ++P I ++ Sbjct: 204 SLRPGEIPDAAFIHAARKRRQMAREL--GGDAPLVEAEVANKRLVHED---EQGGSDDEDEKRIVFSGVKQKSQ--RQKIAEE-IGIEGSDDEALDTEGNDEEVSRWEQEQIRKGISIPQVQTSQPE--DANMYYQAGYEGQPYGVSYNMPYGYAAVGADSSKPVKAEGPVPYPIPSSSLTPITTALVKKRLTDRLSSMRQGRDASARRYEQIQEELQASNSS----ILQLEDSSQHTAEQYKFLQEMRGYVRDLLECFSEKVPAVLELEAAMHQLLRQRAARRVQRRQDDIKDESAEFSSLSNKAVMAPNLDPFGRDRAAYQ---ELGKQRRVAEREARRTRRRQAREQSGKRAEHKEGLSSDDEETSTDINSFNLERDRVLKESKKVFEDVVEDFHSLDCIKSRFEVWRKLYFTCYRDAYIGLCLPKLFNPLIRLQLIPWSPLEDECPNFEYMLWFESLLFYG-----CEELTNTREEDI-DIGLLPAIVER 674
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Nematostella
Match: EDO38733 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC25]) HSP 1 Score: 194.897 bits (494), Expect = 5.767e-54 Identity = 122/403 (30.27%), Postives = 211/403 (52.36%), Query Frame = 1 Query: 1012 LEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQS-TFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQT--PNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISK 2208 +E + F + Y+ L+EC +EK+ + LEK + ++R+E+ ++R + DV+DQ E + + I + E S + R RR + N +++EG+S+DDEE ++ + E E++ +D+ +F D E+ + I F E K+ Y++AYI L + P +RLEL+ WNPL+T + W+ L+ L +++ D S D+K+IP I DK +IPK+T + +W+ LS T+T VK + KL + PT KN + ++L AI+ R + +++D+ +PLY + EN + FFQ Q W+ K F+N++++H ++ P L +LA++G+LN Y+ G L D + K I + P+ W+ K Sbjct: 43 IERNFAFFQEMRGYVRDLIECLNEKVPVIDALEKSIHGLLRQRAERFVQRRQDDVKDQATEYLEAQMGKKISTGVVEPSKQRRAAEREGRRTRRRRQREINPAPSSYHEGMSTDDEETETDSLIFRKEAEKVISDSRTIFEDVVDEFSCVSAIRARFEEWKQLCGDSYRNAYIGLCLPKLFKPFVRLELLPWNPLETRAKDLESMQWYTDLLGL---GLTSQMDLDPSD---DDVKVIPGIVDKTVIPKVTGLMEHVWDPLSTTQTACAVKLVEKLAVEYPTVQSKNKSTQKLFHAIIMRMRKSVSDDVYVPLYPKPLLENKTSGALAFFQRQFWSCFKLFSNILLWHGLVAPARLHELAIDGLLNRYLLMG---LQHSFLYYDSLDKCKSIVSAVPKAWLDK 436
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Medaka
Match: paxbp1 (PAX3 and PAX7 binding protein 1 [Source:NCBI gene;Acc:101173243]) HSP 1 Score: 189.889 bits (481), Expect = 1.229e-49 Identity = 199/706 (28.19%), Postives = 330/706 (46.74%), Query Frame = 1 Query: 343 PAVINETKDYYECSSSNIAFNMQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDS------DQE-NEWESRQLQKAIN---KNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLS----------------------ELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNN---------FKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEII-LSTKSSAIQS--TF--------EMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTP--NFHKWNWFKILI--QFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWV-SIWNLLSKTETQNLVKFIGKLISQIPT-FNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKI-DILSELSSLIRFINKFACS 2283 P IN + SS + +++ G+IPDAA I A+K+R+LA+ + + + D P + ++ + RI G N + RQ I + IE GSD ++ D+E + WE Q++K I+ QP EP +Y ++E + + S L KL +L+ KR +E + + + +K+ T + K A +E I +++ +S NN + Y+ L+ECF+EK+ ++ LE ++ ++R+ +L++R + D++D+ E LS K+ S +F E S + R RR +N H EGLSSDDEE + I+S E ++I ++ ++F D ++ S++ + F E ++++ Y+DAYI L + SPL+RL+LITWNPL+ P NF WF+ L+ F + S T E GD+ ++P I +KVI+ KL+ +W+ LS ++T LV FI +L PT + N +EL+K IV R + EDI +PLY + +N N ++ F+Q Q W+ +K N++ + I+ + L LAL+ LN YI + L +++G N + K + P W S LK L +L L R++ A S Sbjct: 192 PKSINPGGTFNTLSSLS---SLKPGEIPDAAFIHAARKRRQLAR-ELGGEAPLVQMD-TPQKRLDQEDQDASDDDED---EKRIRFSGVKNKTQ--RQKIAEE-IGIE-GSDDEALDAAGQDEEVSRWEQEQIRKGISIPQVQSSQPEEPT-----VYYQNSYETQPYGSSYSMPFTYSTVALQTAKLPSLSNNGSVHYGRPICELTPIPIDLVKKRLQERLGHMHAG-HNANVKRYTQI----KEDLAASESVIQQLEGSSNNNAEQYKFLQEMRGYVGDLLECFNEKVPAVLELEAAMHQLLRQRASRLVQRRQDDIKDESAEFASLSNKAVMAPSLDSFGRDRAAYQEHSRQRRIAEREARRTRRRQAREQNGKRAEHKEGLSSDDEETSTDITSFNMEKDRIVWESKKIFEDVLEDFHSLDCMKNRFEEWRKEYPTCYRDAYIALCLPRLFSPLVRLQLITWNPLEVPCANFEYMLWFESLLFYGFDEHS--------TLQKEDGDIGLLPAIVEKVILSKLSVLAEQVWDPLSSSQTARLVAFIHRLRKGYPTVLHGDNRYTQELLKMIVLRTRRTLDEDIFLPLYPKNVMDNKNSGAYLFYQRQFWSCVKLLGNILQWEGILSTSCLMDLALDSTLNRYILSALQT-TDVGEEN--VHKCQKVVECLPVHWFSG---LKGQQTLPQLEPLCRYLAHLANS 861
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Medaka
Match: gcfc2 (GC-rich sequence DNA-binding factor 2 [Source:NCBI gene;Acc:101169100]) HSP 1 Score: 103.219 bits (256), Expect = 4.002e-22 Identity = 95/395 (24.05%), Postives = 182/395 (46.08%), Query Frame = 1 Query: 1033 FNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEII-LSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPN---FHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVS-IWNLLSKTETQNLVKFIGKLISQIPTF-NDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDW 2199 + N YI LVEC EK+ ++ LE + + ++ E L+ + R +++Q + + LS + S+ +NR + + LS ++EE Q I I++ + +FSD ++CS++ IL F E + + Y +AYI+ + +L+P+IR +L++WNPL+ + F WF + F E+ E D + + + +K ++PK+T +V +W+ +S ++ +L +L F +++ VK ++A++ R C+ ED+ IPLY ++ ++ + F Q W A+K N+ + ++ +L +L L+ +LN Y+ ++ L N+ I S P W Sbjct: 422 YRNMTLYIHNLVECLREKVVEINALELELHMLLSDQMEALLAQTRGRIKEQAERLQQLSYNTEEQSSSTVETNRKCIKEPQSEDFDLPEDAQ-----------LSPEEEE------QLQARIADIQSRSQDVFSDVQDDFCSVKNILARFEEWRRSYSESYHNAYISLCIPKLLNPIIRHQLLSWNPLKESSCGEFENLPWFSAVETFCHGHGHEEL-------EQIDRQTLTSTIEKTVLPKMTAFVELVWDPMSHQQSVSLSGVCHRLEEDYSIFKGEQSKPVKGFIEAVIQRLRNCVDEDVFIPLYPKKCFDDGSSAQCHFRDQQFWTAVKLLGNMGRWDLLLPDAVLKELMLDKLLNRYL---MITLCSQTLSNNTPA-CKKIAESLPLSW 788
BLAST of GC-rich sequence DNA-binding factor 1 vs. Planmine SMEST
Match: SMESG000061662.1 (SMESG000061662.1) HSP 1 Score: 1366.29 bits (3535), Expect = 0.000e+0 Identity = 707/710 (99.58%), Postives = 709/710 (99.86%), Query Frame = 1 Query: 247 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELLSMLKD 2376 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQ GDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTN+NFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASRISDRESRRLRRIRTRENLNIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSIEKILYEFLELKEKFEVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELL+MLKD Sbjct: 78 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQTGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNDNFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASRISDRESRRLRRIRTRENLNIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSIEKILYEFLELKEKFEVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELLAMLKD 787 HSP 2 Score: 77.0258 bits (188), Expect = 3.272e-14 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 2 Query: 17 MNMSKSFRRNYRXXXXXXXXXXXXXXXXXXXXXXTIVENRSVLSFGDELEEDTDSFKEKKSYQ 205 MNMSKSFRRNYRNKNVDSDDENSNSKSNLNLNEKTIVENRSVLSFGDELEEDTDSFKEKKSYQ Sbjct: 1 MNMSKSFRRNYRNKNVDSDDENSNSKSNLNLNEKTIVENRSVLSFGDELEEDTDSFKEKKSYQ 63
BLAST of GC-rich sequence DNA-binding factor 1 vs. Planmine SMEST
Match: SMESG000061662.1 (SMESG000061662.1) HSP 1 Score: 1358.58 bits (3515), Expect = 0.000e+0 Identity = 706/710 (99.44%), Postives = 709/710 (99.86%), Query Frame = 1 Query: 247 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNENFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASXXXXXXXXXXXXXXXXXXXXIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSXXXXXXXXXXXXXXXXVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELLSMLKD 2376 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQ+ DIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTN+NFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASRISDRESRRLRRIRTRENLNIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSIEKILYEFLELKEKFEVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELL+MLKD Sbjct: 76 YNKTSTETIPIHQDLDIHVQHNLKLIVKQPNPPAVINETKDYYECSSSNIAFNMQR-DIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMAEHGINPDDSDRIAMVGHSNSFEKDRQMIRNNFLSIEHGSDRDSDQENEWESRQLQKAINKNIYQPREPKKVDWQLYTNDNFENDKQSAVLMELNSISIDELSVGKLSELLMKRKEEIIDSKYKNSQDVYIKQQTLMSNENKAISAKAEIPILEIKYNSFNNFKKYISILVECFDEKMEKMVHLEKKFLKIHKERSEKLIKRNRQDVQDQFDEIILSTKSSAIQSTFEMSNRASRISDRESRRLRRIRTRENLNIMNHYEGLSSDDEEPKSSISSRQNEIEQIKTDASQLFSDTDPEYCSIEKILYEFLELKEKFEVDYKDAYINGFLAHILSPLIRLELITWNPLQTPNFHKWNWFKILIQFTKKSLRTEIITDTSSIEFGDLKIIPTIFDKVIIPKLTEWVSIWNLLSKTETQNLVKFIGKLISQIPTFNDKNNNVKELVKAIVCRCNECIAEDIAIPLYIEQYKENPNGQSFQFFQHQVWAAIKTFTNVMMFHEIIEPNLLCKLALEGILNNYITTGLVILSEMGYINDVITKVMMIKYSFPEDWISKSDELKIDILSELSSLIRFINKFACSHKKEKSVINFAFSMLDHFNVGRGELLAMLKD 784 HSP 2 Score: 72.7886 bits (177), Expect = 7.863e-13 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 2 Query: 23 MSKSFRRNYRXXXXXXXXXXXXXXXXXXXXXXTIVENRSVLSFGDELEEDTDSFKEKKSYQ 205 MSKSFRRNYRNKNVDSDDENSNSKSNLNLNEKTIVENRSVLSFGDELEEDTDSFKEKKSYQ Sbjct: 1 MSKSFRRNYRNKNVDSDDENSNSKSNLNLNEKTIVENRSVLSFGDELEEDTDSFKEKKSYQ 61 The following BLAST results are available for this feature:
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of GC-rich sequence DNA-binding factor 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of GC-rich sequence DNA-binding factor 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of GC-rich sequence DNA-binding factor 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of GC-rich sequence DNA-binding factor 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002962 ID=SMED30002962|Name=GC-rich sequence DNA-binding factor 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2476bpback to top protein sequence of SMED30002962-orf-1 >SMED30002962-orf-1 ID=SMED30002962-orf-1|Name=SMED30002962-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=658bp MQKGDIPDAAAIDHAKKQRELAKKQFKAHSSSSEEDEIPHVNFIKHGMVMback to top protein sequence of SMED30002962-orf-2 >SMED30002962-orf-2 ID=SMED30002962-orf-2|Name=SMED30002962-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=105bp LFKYSMNMSKSFRRNYRNKNVDSDDENSNSKSNLNLNEKTIVENRSVLSFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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