Macrophage migration inhibitory factor-like

Overview
NameMacrophage migration inhibitory factor-like
Smed IDSMED30002820
Length (bp)860
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Macrophage migration inhibitory factor-like (SMED30002820) t-SNE clustered cells

Violin plots show distribution of expression levels for Macrophage migration inhibitory factor-like (SMED30002820) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Macrophage migration inhibitory factor-like (SMED30002820) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Macrophage migration inhibitory factor-like (SMED30002820) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002820

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30002820SMESG000075633.1 dd_Smed_v4_4631_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30002820SMESG000075633.1 dd_Smed_v4_4631_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002820SMESG000075633.1 dd_Smed_v4_4631_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30002820SMESG000075633.1 dd_Smed_v4_4631_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002820SMESG000075633.1 Contig42377newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002820SMESG000075633.1 Contig42377uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Match: MIF (macrophage migration inhibitory factor [Source:HGNC Symbol;Acc:HGNC:7097])

HSP 1 Score: 70.8626 bits (172), Expect = 7.175e-15
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+  + TNV ++ +P    S ++++  +   KP  +    + PD +M+ GGS + CA+ +L  IG     ++  YSK +  +L E L I  +R YI++   +A N+G N ST A
Sbjct:    1 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Match: MIF (macrophage migration inhibitory factor [Source:HGNC Symbol;Acc:HGNC:7097])

HSP 1 Score: 70.8626 bits (172), Expect = 7.175e-15
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+  + TNV ++ +P    S ++++  +   KP  +    + PD +M+ GGS + CA+ +L  IG     ++  YSK +  +L E L I  +R YI++   +A N+G N ST A
Sbjct:    1 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Match: DDT (D-dopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2732])

HSP 1 Score: 52.373 bits (124), Expect = 3.397e-8
Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP L + TN+  +++P  L   +      ++ KP   V   + P   M+L GS + CA +++  IG  G AE +  +S    E L + L +  +R  I F P  +  IG  G+
Sbjct:    1 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Match: DDT (D-dopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2732])

HSP 1 Score: 52.373 bits (124), Expect = 3.397e-8
Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP L + TN+  +++P  L   +      ++ KP   V   + P   M+L GS + CA +++  IG  G AE +  +S    E L + L +  +R  I F P  +  IG  G+
Sbjct:    1 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Match: DDT (D-dopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2732])

HSP 1 Score: 52.373 bits (124), Expect = 3.397e-8
Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP L + TN+  +++P  L   +      ++ KP   V   + P   M+L GS + CA +++  IG  G AE +  +S    E L + L +  +R  I F P  +  IG  G+
Sbjct:    1 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Celegans
Match: mif-1 (MIF (Macrophage migration Inhibitory Factor) related [Source:UniProtKB/TrEMBL;Acc:Q9U228])

HSP 1 Score: 48.1358 bits (113), Expect = 3.890e-7
Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQ----KLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGD-GNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+ SI  NV   K+P    + I +E      KL+NKP  +       D  +   G+ +      L  IG  G+A+++   S  +  ++++HLGIP NR YI F+   A +I  NG T A
Sbjct:    1 MPVFSINVNV---KVPAEKQNEILKELSTVLGKLLNKPEQYMCIHFHEDQGILYAGTTEPAGFAVLKSIGGVGSAKQNNAISAVVFPIIEKHLGIPGNRLYIEFVNLGAADIAYNGQTFA 117
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Celegans
Match: mif-2 (MIF-like protein mif-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18785])

HSP 1 Score: 45.4394 bits (106), Expect = 4.002e-6
Identity = 27/116 (23.28%), Postives = 57/116 (49.14%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKAS 763
            MP++ + TN+   K+P +    +++   + M KP   +  +I   + +  G + D   ++++  IG  +AE +   +  ++E   + LG+P ++  I F       +G NG+T A 
Sbjct:    1 MPMVRVATNLPNEKVPVDFEIRLTDLLARSMGKPRERIAVEIAAGARLVHGATHDPVTVISIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHDLPPATVGFNGTTVAE 116
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Celegans
Match: mif-2 (MIF-like protein mif-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18785])

HSP 1 Score: 45.0542 bits (105), Expect = 8.221e-6
Identity = 27/115 (23.48%), Postives = 57/115 (49.57%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP++ + TN+   K+P +    +++   + M KP   +  +I   + +  G + D   ++++  IG  +AE +   +  ++E   + LG+P ++  I F       +G NG+T A
Sbjct:   22 MPMVRVATNLPNEKVPVDFEIRLTDLLARSMGKPRERIAVEIAAGARLVHGATHDPVTVISIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHDLPPATVGFNGTTVA 136
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Zebrafish
Match: mif (macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1])

HSP 1 Score: 86.6557 bits (213), Expect = 5.439e-21
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNVAK  +P  L S  ++E  K M KP  +   Q+ PD +M  GG GD CA+ +L  IG  +  ++  YSK +  +L +HLG+  +R YI+F+     N+  N ST
Sbjct:    1 MPMFVVNTNVAKDSVPAELLSEATQELAKAMGKPQQYIAVQVVPDQMMMFGGKGDPCALCSLTSIGKISGAQNKQYSKLLMGLLNKHLGVSADRIYINFVDMDPANVAWNNST 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Zebrafish
Match: mif (macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1])

HSP 1 Score: 86.6557 bits (213), Expect = 5.439e-21
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNVAK  +P  L S  ++E  K M KP  +   Q+ PD +M  GG GD CA+ +L  IG  +  ++  YSK +  +L +HLG+  +R YI+F+     N+  N ST
Sbjct:    1 MPMFVVNTNVAKDSVPAELLSEATQELAKAMGKPQQYIAVQVVPDQMMMFGGKGDPCALCSLTSIGKISGAQNKQYSKLLMGLLNKHLGVSADRIYINFVDMDPANVAWNNST 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Zebrafish
Match: ddt (D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-040625-160])

HSP 1 Score: 46.595 bits (109), Expect = 2.863e-6
Identity = 30/113 (26.55%), Postives = 51/113 (45.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKP--TVFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP ++I TN+  SK P +    +       + KP   +   + PD  M   GS   C ++ +  IG    AEK+  +S ++ + L+   G+  +R  + F P     IG  G+
Sbjct:    1 MPFINIETNLPASKFPEDFLKRLCSTLAAALGKPEDRMNLVVKPDLPMLFAGSSSPCVLMTVSAIGVTDTAEKNKQHSAKIFQFLQGEFGLSDDRILVLFYPLEPSQIGKKGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Zebrafish
Match: ddt (D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-040625-160])

HSP 1 Score: 46.595 bits (109), Expect = 2.863e-6
Identity = 30/113 (26.55%), Postives = 51/113 (45.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKP--TVFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP ++I TN+  SK P +    +       + KP   +   + PD  M   GS   C ++ +  IG    AEK+  +S ++ + L+   G+  +R  + F P     IG  G+
Sbjct:    1 MPFINIETNLPASKFPEDFLKRLCSTLAAALGKPEDRMNLVVKPDLPMLFAGSSSPCVLMTVSAIGVTDTAEKNKQHSAKIFQFLQGEFGLSDDRILVLFYPLEPSQIGKKGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Xenopus
Match: cd2ap (CD2-associated protein [Source:Xenbase;Acc:XB-GENE-987810])

HSP 1 Score: 76.6406 bits (187), Expect = 5.170e-17
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP  ++ TNV +  +P  L S +++   K   KP  +    I PD +MS G S D CA+ +L  IG     ++  YSK + + L + + IP NR YI+F   +  N+G NGST A
Sbjct:    1 MPTFTVCTNVCRDSMPDTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAVCSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHDLNPANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Mouse
Match: Mif (macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:MGI Symbol;Acc:MGI:96982])

HSP 1 Score: 70.4774 bits (171), Expect = 7.115e-15
Identity = 36/115 (31.30%), Postives = 63/115 (54.78%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+  + TNV ++ +P    S ++++  +   KP  +    + PD +M+  G+ D CA+ +L  IG     ++  YSK +  +L + L I  +R YI++   +A N+G NGST A
Sbjct:    1 MPMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Mouse
Match: Ddt (D-dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:1298381])

HSP 1 Score: 50.0618 bits (118), Expect = 1.647e-7
Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKP--TVFCQITPDSIMSLGGSGDLCAMVNLVYIG-DGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGS 751
            MP + + TN+  S+IP  L + +      +++KP   V   I P   + +  S + CA + +  IG  G AE++  +S    + L E L +  +R  I F P  A  IG  G+
Sbjct:    1 MPFVELETNLPASRIPAGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAHLLVSSIGVVGTAEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEAWQIGKKGT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Match: sp|Q02960|MIF_CHICK (Macrophage migration inhibitory factor OS=Gallus gallus OX=9031 GN=MIF PE=3 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-20
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+ +I TNV K  +P +L   ++++  K   KP  +    I PD +MS GGS D CA+ +L  IG    +++  Y+K + +M+ +HL +  +R YI++   +A N+G NGST A
Sbjct:    1 MPMFTIHTNVCKDAVPDSLLGELTQQLAKATGKPAQYIAVHIVPDQMMSFGGSTDPCALCSLYSIGKIGGQQNKTYTKLLCDMIAKHLHVSADRVYINYFDINAANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Match: sp|Q76BK2|MIF_XENLA (Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.861e-19
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+ +I TNV +  +P  L S ++++  K   KP  +    I PD IMS G S D CA+ +L  IG     ++  Y+K + ++L + L IP NR YI++   +A N+G NGST A
Sbjct:    1 MPVFTIRTNVCRDSVPDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Match: sp|Q1ZZU7|MIF_SHEEP (Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.889e-16
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+  + TNV ++ +P  L S ++++  +   KP  +    + PD +M+ GGS + CA+ +L  IG     ++  YSK +  +L E L I  +R YI+F   +A N+G NGST A
Sbjct:    1 MPMFVVNTNVPRASVPDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Match: sp|P80177|MIF_BOVIN (Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6)

HSP 1 Score: 77.0258 bits (188), Expect = 1.889e-16
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP+  + TNV ++ +P  L S ++++  +   KP  +    + PD +M+ GGS + CA+ +L  IG     ++  YSK +  +L E L I  +R YI+F   +A N+G NGST A
Sbjct:    1 MPMFVVNTNVPRASVPDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Match: sp|A9JSE7|MIF_XENTR (Macrophage migration inhibitory factor OS=Xenopus tropicalis OX=8364 GN=mif PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.739e-16
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP  ++ TNV +  +P  L S +++   K   KP  +    I PD +MS G S D CA+ +L  IG     ++  YSK + + L + + IP NR YI+F   +  N+G NGST A
Sbjct:    1 MPTFTVCTNVCRDSMPDTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAVCSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHDLNPANVGWNGSTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Match: A0A2I0TUC6 (Macrophage migration inhibitory factor-like OS=Limosa lapponica baueri OX=1758121 GN=llap_12310 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.179e-20
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP   + TN++K K+P +LP  ++++  K M KP  +   Q++PD +MS GGS D CAM  L  IG    +++ +YSK + ++L + L IP +R Y+ F   SA N+G N +T A
Sbjct:    1 MPKFIVNTNISKDKVPESLPGELTQQLSKAMGKPAQYVAIQVSPDQLMSFGGSADPCAMCFLYSIGKIGEQENKVYSKLLCDLLNKQLKIPSDRIYVSFFEISAGNVGWNNTTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Match: A0A093CRS9 (Macrophage migration inhibitory factor OS=Pterocles gutturalis OX=240206 GN=N339_03419 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.373e-19
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP   + TN++K K+P +    ++++  K M KP  +   QI+PD +MS GGS D CAM  L  IG    +++ +YSK + E+L + L IP +R Y+ F   SA N+G N +T A
Sbjct:    1 MPKFIVNTNISKDKVPESFMGELTQQLSKAMGKPAQYLAIQISPDQLMSFGGSTDPCAMCFLYSIGKTGEQENKVYSKLLCELLNKELKIPSDRIYVSFFEISAGNVGWNNTTFA 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Match: A0A087R3E2 (Macrophage migration inhibitory factor OS=Aptenodytes forsteri OX=9233 GN=AS27_08967 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.613e-19
Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFC--QITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKA 760
            MP   + TN++K K+P +    ++++  K M KP  +   QI+PD +MS GGS D CAM  L  IG    +++ +YSK + ++L + L IP +R Y+ F   SA N+G N +T A
Sbjct:    1 MPKFIVYTNISKDKVPESFTGELTQQLSKAMGKPAQYLAIQISPDQLMSFGGSTDPCAMCFLYSIGKIGEQENKVYSKLLCDLLNKQLKIPSDRIYVSFFEISAGNVGWNTTTFA 115
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BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Match: A0A3Q3L4K9 (Macrophage migration inhibitory factor OS=Mastacembelus armatus OX=205130 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.565e-19
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNVAKS +P  L S  +EE  K M KP  +    I PD IM  GG GD CA+ +L  IG  +   +  YSK +  +LK+HLGI  +R YI+F+   A N+  N +T
Sbjct:    1 MPMFMVSTNVAKSDVPAGLLSEATEELAKAMGKPAQYIAVHINPDQIMMFGGKGDPCALCSLHSIGKISGAHNKQYSKLLCGLLKKHLGISPDRIYINFVDMDAANVAWNNTT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Match: A0A3Q3FVY9 (Macrophage migration inhibitory factor OS=Kryptolebias marmoratus OX=37003 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.008e-18
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVF--CQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNVAKS +P  L S  +EE  K+M KP  +    + PD +M  GG GDLCA+ +L  IG  +   +  YSK +  +L +HLG+  +R YI+F+   A N+  N +T
Sbjct:    1 MPMFVVNTNVAKSDVPAALLSEATEELAKVMGKPAQYIAVHVNPDQMMKFGGKGDLCALCSLHSIGKISGAHNKQYSKLLCGLLNKHLGVSPDRIYINFVDMDAANVAWNNTT 113
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Cavefish
Match: mif (macrophage migration inhibitory factor [Source:NCBI gene;Acc:103031017])

HSP 1 Score: 82.0333 bits (201), Expect = 2.521e-19
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNV K  +P +L S ++EE  K M KP   +   I PD +M  GG  D CA+ +L  IG     ++  YSK +  +L +HLGI  +R YI+F    A N+  N ST
Sbjct:    1 MPMFVVNTNVGKDVVPADLMSQLTEELAKAMGKPANYIAVHIIPDQMMMFGGKSDPCALCSLHSIGKIGGSQNKQYSKLLMGILNKHLGISPDRIYINFFDMDAANVAWNNST 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Sea Lamprey
Match: mif (macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1])

HSP 1 Score: 55.0694 bits (131), Expect = 2.776e-10
Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINR 697
            MP   I TNV+  ++  ++   ++    K + KP   V   + P  +MS GG+ + CA+ +L  IG  +  ++  YS  +SE +  HLGIP +R
Sbjct:    1 MPTFVIHTNVSADRVSASVHDEVTALVAKALGKPVQYVAVHVVPGQLMSFGGTKEPCALAHLSSIGKISPAENKKYSALLSEAMNTHLGIPKDR 94
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Nematostella
Match: EDO37697 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF14])

HSP 1 Score: 56.6102 bits (135), Expect = 2.281e-10
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+L I TNV  + +P N     +     L+ KP   V   I P   +  GG+ +  A+VNL  IG  +       SK +S  +++ LG+P +R YI F       +G NG+T
Sbjct:    1 MPILEIQTNVPAANVPDNFLKESTTLLAGLVGKPESYVLVCIEPGLRLMFGGTTEPAAIVNLTNIGQHDPATTKHRSKVISNHIQKTLGVPADRMYIIFHDKQRFEVGYNGAT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Medaka
Match: mif (macrophage migration inhibitory factor [Source:NCBI gene;Acc:101160246])

HSP 1 Score: 86.2705 bits (212), Expect = 6.672e-21
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFCQ--ITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGST 754
            MP+  + TNVAKS +P  L S  +EE  K M KP  +    I PD +M  GG GD CA+ +L  IG  +   +  YSK +  +L +HLGI  +R Y++F+   A N+G N +T
Sbjct:    1 MPMFVVNTNVAKSDVPAALLSEATEELAKAMGKPAQYIAVLINPDQMMMFGGKGDPCALCSLHSIGKISGAHNKQYSKLLCGLLNKHLGICQDRIYVNFVDMDAANVGWNNTT 113
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Planmine SMEST
Match: SMESG000075633.1 (SMESG000075633.1)

HSP 1 Score: 232.646 bits (592), Expect = 5.470e-78
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKASM 766
            MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFCQITPD IMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKE+LGIPINRYYIHFLPTSAENIGCNGSTKASM
Sbjct:    1 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFCQITPDCIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEYLGIPINRYYIHFLPTSAENIGCNGSTKASM 115
[Close]
BLAST of Macrophage migration inhibitory factor-like vs. Planmine SMEST
Match: SMESG000075635.1 (SMESG000075635.1)

HSP 1 Score: 144.436 bits (363), Expect = 2.121e-43
Identity = 70/116 (60.34%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:  422 MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPT--VFCQITPDSIMSLGGSGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPTSAENIGCNGSTKAS 763
            MPLL+I TNV+KSK+P  LP I S+EF KLM KP   V C I+ D+IM+ GGS + CA+V L ++G  +A+KHA YSKRMSE+L EHLGI  NRYY+HF+  SAENIG  G T AS
Sbjct:    1 MPLLNITTNVSKSKVPEGLPIIFSQEFAKLMGKPIDYVACNISTDNIMAFGGSSEPCALVTLTFLGQASAQKHATYSKRMSELLHEHLGISKNRYYLHFVAASAENIGYQGHTFAS 116
The following BLAST results are available for this feature:
BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MIF7.175e-1532.17macrophage migration inhibitory factor [Source:HGN... [more]
MIF7.175e-1532.17macrophage migration inhibitory factor [Source:HGN... [more]
DDT3.397e-829.20D-dopachrome tautomerase [Source:HGNC Symbol;Acc:H... [more]
DDT3.397e-829.20D-dopachrome tautomerase [Source:HGNC Symbol;Acc:H... [more]
DDT3.397e-829.20D-dopachrome tautomerase [Source:HGNC Symbol;Acc:H... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
mif-13.890e-732.50MIF (Macrophage migration Inhibitory Factor) relat... [more]
mif-24.002e-623.28MIF-like protein mif-2 [Source:UniProtKB/Swiss-Pr... [more]
mif-28.221e-623.48MIF-like protein mif-2 [Source:UniProtKB/Swiss-Pr... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
mif5.439e-2138.05macrophage migration inhibitory factor [Source:ZFI... [more]
mif5.439e-2138.05macrophage migration inhibitory factor [Source:ZFI... [more]
ddt2.863e-626.55D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE... [more]
ddt2.863e-626.55D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
cd2ap5.170e-1736.52CD2-associated protein [Source:Xenbase;Acc:XB-GENE... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Mif7.115e-1531.30macrophage migration inhibitory factor (glycosylat... [more]
Ddt1.647e-729.20D-dopachrome tautomerase [Source:MGI Symbol;Acc:MG... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q02960|MIF_CHICK3.162e-2036.52Macrophage migration inhibitory factor OS=Gallus g... [more]
sp|Q76BK2|MIF_XENLA2.861e-1938.26Macrophage migration inhibitory factor OS=Xenopus ... [more]
sp|Q1ZZU7|MIF_SHEEP1.889e-1634.78Macrophage migration inhibitory factor OS=Ovis ari... [more]
sp|P80177|MIF_BOVIN1.889e-1634.78Macrophage migration inhibitory factor OS=Bos taur... [more]
sp|A9JSE7|MIF_XENTR2.739e-1636.52Macrophage migration inhibitory factor OS=Xenopus ... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2I0TUC62.179e-2039.13Macrophage migration inhibitory factor-like OS=Lim... [more]
A0A093CRS95.373e-1939.13Macrophage migration inhibitory factor OS=Pterocle... [more]
A0A087R3E28.613e-1938.26Macrophage migration inhibitory factor OS=Aptenody... [more]
A0A3Q3L4K99.565e-1942.48Macrophage migration inhibitory factor OS=Mastacem... [more]
A0A3Q3FVY91.008e-1839.82Macrophage migration inhibitory factor OS=Kryptole... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mif2.521e-1938.94macrophage migration inhibitory factor [Source:NCB... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mif2.776e-1031.91macrophage migration inhibitory factor [Source:ZFI... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO376972.281e-1032.74Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mif6.672e-2140.71macrophage migration inhibitory factor [Source:NCB... [more]
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BLAST of Macrophage migration inhibitory factor-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000075633.15.470e-7898.26SMESG000075633.1[more]
SMESG000075635.12.121e-4360.34SMESG000075635.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002820 ID=SMED30002820|Name=Macrophage migration inhibitory factor-like|organism=Schmidtea mediterranea sexual|type=transcript|length=860bp
CTGATATATGATATTTTAAAATATTCCTAAAATTAATATAAAAATACATA
ACTATTTTTTAACAAAATAAAACTTGTCTAAAAATTAACGTCTAATGAAA
AAATTAATCTAAACGATCATTTCAATTTTGAAACAATATTGCTAGTAAGA
CGGTTGTCAAGGTGAAAATATAGGCCAAAGTAGTATTATTAAAACCTTAA
CTTCATATTGCAAAAAAATTTAAGGAAAATAAGAATTGTATTTTATTGAA
TAAATTATTGCAATATTTTAAAATATCATATATCAGTAAATTCGTAATGA
TAGATTATAAATTGATGCTATATAGTATTAAATTGACAGATTTTAGCTTA
TCTTAAATTACGTAAGAATAAGTTTGTATAAATTTTATGAAATTTAAATA
TCTATTAGACTTCGTATTATTATGCCATTATTAAGTATCATTACAAATGT
TGCTAAATCTAAAATACCTGGAAACCTGCCCTCAATTATATCTGAAGAAT
TTCAAAAGTTGATGAACAAACCAACAGTTTTTTGTCAAATAACACCAGAT
AGTATAATGTCCTTAGGAGGATCAGGTGATTTGTGCGCAATGGTAAATTT
GGTATATATTGGAGATGGAAATGCTGAAAAGCATGCTATATATTCAAAAA
GAATGAGTGAAATGTTGAAAGAGCATTTAGGAATTCCAATTAATAGATAT
TATATTCATTTCCTTCCGACTTCTGCTGAAAATATTGGATGCAATGGCTC
TACAAAAGCTTCGATGTAGTCTAAATAGATATAATTCCAAATTTATTTTA
TAATATACTTTGTATTTTAAAGACAAAAAATTAATAAATTCGACTTTGAT
TATTAAAAAA
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protein sequence of SMED30002820-orf-1

>SMED30002820-orf-1 ID=SMED30002820-orf-1|Name=SMED30002820-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=116bp
MPLLSIITNVAKSKIPGNLPSIISEEFQKLMNKPTVFCQITPDSIMSLGG
SGDLCAMVNLVYIGDGNAEKHAIYSKRMSEMLKEHLGIPINRYYIHFLPT
SAENIGCNGSTKASM*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR001398Macrophage_inhib_fac
IPR014347Tautomerase/MIF_sf
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014347Tautomerase/MIF superfamilyGENE3DG3DSA:3.30.429.10coord: 2..113
e-value: 2.2E-25
score: 91.3
IPR014347Tautomerase/MIF superfamilySUPERFAMILYSSF55331Tautomerase/MIFcoord: 1..111
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..112
e-value: 4.8E-20
score: 72.0
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 1..111
NoneNo IPR availablePANTHERPTHR11954:SF6MACROPHAGE MIGRATION INHIBITORY FACTORcoord: 1..111
NoneNo IPR availablePRODOMPD004816coord: 9..113
e-value: 8.0E-14
score: 181.0